{"id":"https://openalex.org/W4390056868","doi":"https://doi.org/10.3389/fmicb.2023.1303682","title":"Genomics insights into a Mycobacterium pinnipedii isolate causing tuberculosis in a captive South American sea lion (Otaria flavescens) from Italy","display_name":"Genomics insights into a Mycobacterium pinnipedii isolate causing tuberculosis in a captive South American sea lion (Otaria flavescens) from Italy","publication_year":2023,"publication_date":"2023-12-21","ids":{"openalex":"https://openalex.org/W4390056868","doi":"https://doi.org/10.3389/fmicb.2023.1303682","pmid":"https://pubmed.ncbi.nlm.nih.gov/38188565","pmcid":"https://www.ncbi.nlm.nih.gov/pmc/articles/10768177"},"language":"en","primary_location":{"id":"doi:10.3389/fmicb.2023.1303682","doi":"https://doi.org/10.3389/fmicb.2023.1303682","is_oa":true,"landing_page_url":"https://doi.org/10.3389/fmicb.2023.1303682","pdf_url":null,"source":{"id":"https://openalex.org/S2484704948","display_name":"Frontiers in Microbiology","issn_l":"1664-302X","issn":["1664-302X"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["cwts-core","doaj","jufo-1","ki-jl-1","norway-2","poland-100","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310320527","host_organization_name":"Frontiers Media","host_organization_lineage":["https://openalex.org/P4310320527"],"host_organization_lineage_names":["Frontiers Media"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Frontiers in Microbiology","raw_type":"journal-article"},"volume":null,"type":"article","is_traditional":true,"indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://doi.org/10.3389/fmicb.2023.1303682","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5017989829","display_name":"Patricia Alba","orcid":"https://orcid.org/0000-0002-9621-0955","observed_orcids":["https://orcid.org/0000-0002-9621-0955"]},"institutions":[{"id":"https://openalex.org/I4210150891","display_name":"Istituto Zooprofilattico Sperimentale delle Regioni Lazio e Toscana","ror":"https://ror.org/05pfcz666","country_code":"IT","type":"facility","lineage":["https://openalex.org/I4210150891"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Patricia Alba","raw_affiliation_strings":["Department of General Diagnostics, Istituto Zooprofilattico Sperimentale del Lazio e della Toscana \"M. Aleandri\", Rome, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of General Diagnostics, Istituto Zooprofilattico Sperimentale del Lazio e della Toscana \"M. Aleandri\", Rome, Italy","institution_ids":["https://openalex.org/I4210150891"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5024407160","display_name":"Andrea Caprioli","orcid":"https://orcid.org/0000-0002-7295-6517","observed_orcids":["https://orcid.org/0000-0002-7295-6517"]},"institutions":[{"id":"https://openalex.org/I4210150891","display_name":"Istituto Zooprofilattico Sperimentale delle Regioni Lazio e Toscana","ror":"https://ror.org/05pfcz666","country_code":"IT","type":"facility","lineage":["https://openalex.org/I4210150891"]}],"countries":["IT"],"is_corresponding":true,"raw_author_name":"Andrea Caprioli","raw_affiliation_strings":["Department of General Diagnostics, Istituto Zooprofilattico Sperimentale del Lazio e della Toscana \"M. Aleandri\", Rome, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of General Diagnostics, Istituto Zooprofilattico Sperimentale del Lazio e della Toscana \"M. Aleandri\", Rome, Italy","institution_ids":["https://openalex.org/I4210150891"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5019724809","display_name":"Cristiano Cocumelli","orcid":"https://orcid.org/0000-0002-0524-9054","observed_orcids":["https://orcid.org/0000-0002-0524-9054"]},"institutions":[{"id":"https://openalex.org/I4210150891","display_name":"Istituto Zooprofilattico Sperimentale delle Regioni Lazio e Toscana","ror":"https://ror.org/05pfcz666","country_code":"IT","type":"facility","lineage":["https://openalex.org/I4210150891"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Cristiano Cocumelli","raw_affiliation_strings":["Department of General Diagnostics, Istituto Zooprofilattico Sperimentale del Lazio e della Toscana \"M. Aleandri\", Rome, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of General Diagnostics, Istituto Zooprofilattico Sperimentale del Lazio e della Toscana \"M. Aleandri\", Rome, Italy","institution_ids":["https://openalex.org/I4210150891"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5042808541","display_name":"Claudia Eleni","orcid":"https://orcid.org/0000-0001-7427-2760","observed_orcids":["https://orcid.org/0000-0001-7427-2760"]},"institutions":[{"id":"https://openalex.org/I4210150891","display_name":"Istituto Zooprofilattico Sperimentale delle Regioni Lazio e Toscana","ror":"https://ror.org/05pfcz666","country_code":"IT","type":"facility","lineage":["https://openalex.org/I4210150891"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Claudia Eleni","raw_affiliation_strings":["Department of General Diagnostics, Istituto Zooprofilattico Sperimentale del Lazio e della Toscana \"M. Aleandri\", Rome, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of General Diagnostics, Istituto Zooprofilattico Sperimentale del Lazio e della Toscana \"M. Aleandri\", Rome, Italy","institution_ids":["https://openalex.org/I4210150891"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5006298734","display_name":"Elena Lavinia Diaconu","orcid":"https://orcid.org/0000-0002-2115-4311","observed_orcids":["https://orcid.org/0000-0002-2115-4311"]},"institutions":[{"id":"https://openalex.org/I4210150891","display_name":"Istituto Zooprofilattico Sperimentale delle Regioni Lazio e Toscana","ror":"https://ror.org/05pfcz666","country_code":"IT","type":"facility","lineage":["https://openalex.org/I4210150891"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Elena Lavinia Diaconu","raw_affiliation_strings":["Department of General Diagnostics, Istituto Zooprofilattico Sperimentale del Lazio e della Toscana \"M. Aleandri\", Rome, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of General Diagnostics, Istituto Zooprofilattico Sperimentale del Lazio e della Toscana \"M. Aleandri\", Rome, Italy","institution_ids":["https://openalex.org/I4210150891"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Valentina Donati","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I4210150891","display_name":"Istituto Zooprofilattico Sperimentale delle Regioni Lazio e Toscana","ror":"https://ror.org/05pfcz666","country_code":"IT","type":"facility","lineage":["https://openalex.org/I4210150891"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Valentina Donati","raw_affiliation_strings":["Department of General Diagnostics, Istituto Zooprofilattico Sperimentale del Lazio e della Toscana \"M. Aleandri\", Rome, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of General Diagnostics, Istituto Zooprofilattico Sperimentale del Lazio e della Toscana \"M. Aleandri\", Rome, Italy","institution_ids":["https://openalex.org/I4210150891"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5017007264","display_name":"Angela Ianzano","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I4210150891","display_name":"Istituto Zooprofilattico Sperimentale delle Regioni Lazio e Toscana","ror":"https://ror.org/05pfcz666","country_code":"IT","type":"facility","lineage":["https://openalex.org/I4210150891"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Angela Ianzano","raw_affiliation_strings":["Department of General Diagnostics, Istituto Zooprofilattico Sperimentale del Lazio e della Toscana \"M. Aleandri\", Rome, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of General Diagnostics, Istituto Zooprofilattico Sperimentale del Lazio e della Toscana \"M. Aleandri\", Rome, Italy","institution_ids":["https://openalex.org/I4210150891"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5020012423","display_name":"Luigi Sorbara","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I4210150891","display_name":"Istituto Zooprofilattico Sperimentale delle Regioni Lazio e Toscana","ror":"https://ror.org/05pfcz666","country_code":"IT","type":"facility","lineage":["https://openalex.org/I4210150891"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Luigi Sorbara","raw_affiliation_strings":["Department of General Diagnostics, Istituto Zooprofilattico Sperimentale del Lazio e della Toscana \"M. Aleandri\", Rome, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of General Diagnostics, Istituto Zooprofilattico Sperimentale del Lazio e della Toscana \"M. Aleandri\", Rome, Italy","institution_ids":["https://openalex.org/I4210150891"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5019373725","display_name":"Fiorentino Stravino","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I4210150891","display_name":"Istituto Zooprofilattico Sperimentale delle Regioni Lazio e Toscana","ror":"https://ror.org/05pfcz666","country_code":"IT","type":"facility","lineage":["https://openalex.org/I4210150891"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Fiorentino Stravino","raw_affiliation_strings":["Department of General Diagnostics, Istituto Zooprofilattico Sperimentale del Lazio e della Toscana \"M. Aleandri\", Rome, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of General Diagnostics, Istituto Zooprofilattico Sperimentale del Lazio e della Toscana \"M. Aleandri\", Rome, Italy","institution_ids":["https://openalex.org/I4210150891"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5020216654","display_name":"Natalino Cerini","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I4210091363","display_name":"ASL Roma","ror":"https://ror.org/00eq8n589","country_code":"IT","type":"government","lineage":["https://openalex.org/I4210091363"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Natalino Cerini","raw_affiliation_strings":["Azienda Sanitaria Locale Roma 6, Servizi Veterinari, Rome, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Azienda Sanitaria Locale Roma 6, Servizi Veterinari, Rome, Italy","institution_ids":["https://openalex.org/I4210091363"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5068235254","display_name":"Mar\u00eda Beatrice Boniotti","orcid":"https://orcid.org/0000-0001-6252-9848","observed_orcids":["https://orcid.org/0000-0001-6252-9848"]},"institutions":[{"id":"https://openalex.org/I4210116218","display_name":"Istituto Zooprofilattico Sperimentale della Lombardia e dell'Emilia Romagna \"Bruno Ubertini\"","ror":"https://ror.org/02qcq7v36","country_code":"IT","type":"other","lineage":["https://openalex.org/I4210116218"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Maria Beatrice Boniotti","raw_affiliation_strings":["Istituto Zooprofilattico Sperimentale della Lombardia e dell'Emilia-Romagna, Brescia, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Istituto Zooprofilattico Sperimentale della Lombardia e dell'Emilia-Romagna, Brescia, Italy","institution_ids":["https://openalex.org/I4210116218"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5103923142","display_name":"Mariagrazia Zanoni","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I4210116218","display_name":"Istituto Zooprofilattico Sperimentale della Lombardia e dell'Emilia Romagna \"Bruno Ubertini\"","ror":"https://ror.org/02qcq7v36","country_code":"IT","type":"other","lineage":["https://openalex.org/I4210116218"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Mariagrazia Zanoni","raw_affiliation_strings":["Istituto Zooprofilattico Sperimentale della Lombardia e dell'Emilia-Romagna, Brescia, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Istituto Zooprofilattico Sperimentale della Lombardia e dell'Emilia-Romagna, Brescia, Italy","institution_ids":["https://openalex.org/I4210116218"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5059905247","display_name":"Alessia Franco","orcid":"https://orcid.org/0000-0001-6968-973X","observed_orcids":["https://orcid.org/0000-0001-6968-973X"]},"institutions":[{"id":"https://openalex.org/I4210150891","display_name":"Istituto Zooprofilattico Sperimentale delle Regioni Lazio e Toscana","ror":"https://ror.org/05pfcz666","country_code":"IT","type":"facility","lineage":["https://openalex.org/I4210150891"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Alessia Franco","raw_affiliation_strings":["Department of General Diagnostics, Istituto Zooprofilattico Sperimentale del Lazio e della Toscana \"M. Aleandri\", Rome, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of General Diagnostics, Istituto Zooprofilattico Sperimentale del Lazio e della Toscana \"M. Aleandri\", Rome, Italy","institution_ids":["https://openalex.org/I4210150891"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5040604703","display_name":"Antonio Battisti","orcid":"https://orcid.org/0000-0003-1308-199X","observed_orcids":["https://orcid.org/0000-0003-1308-199X"]},"institutions":[{"id":"https://openalex.org/I4210150891","display_name":"Istituto Zooprofilattico Sperimentale delle Regioni Lazio e Toscana","ror":"https://ror.org/05pfcz666","country_code":"IT","type":"facility","lineage":["https://openalex.org/I4210150891"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Antonio Battisti","raw_affiliation_strings":["Department of General Diagnostics, Istituto Zooprofilattico Sperimentale del Lazio e della Toscana \"M. Aleandri\", Rome, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of General Diagnostics, Istituto Zooprofilattico Sperimentale del Lazio e della Toscana \"M. Aleandri\", Rome, Italy","institution_ids":["https://openalex.org/I4210150891"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5024407160"],"corresponding_institution_ids":["https://openalex.org/I4210150891"],"apc_list":{"value":3295,"currency":"USD","value_usd":3295},"apc_paid":{"value":3295,"currency":"USD","value_usd":3295},"fwci":0.963,"has_fulltext":true,"cited_by_count":5,"citation_normalized_percentile":{"value":0.70686116,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":91,"max":97},"biblio":{"volume":"14","issue":null,"first_page":"1303682","last_page":"1303682"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10038","display_name":"Tuberculosis Research and Epidemiology","score":0.9570000171661377,"subfield":{"id":"https://openalex.org/subfields/2725","display_name":"Infectious Diseases"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T10038","display_name":"Tuberculosis Research and Epidemiology","score":0.9570000171661377,"subfield":{"id":"https://openalex.org/subfields/2725","display_name":"Infectious Diseases"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T11316","display_name":"Mycobacterium research and diagnosis","score":0.027499999850988388,"subfield":{"id":"https://openalex.org/subfields/2713","display_name":"Epidemiology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T11381","display_name":"Infectious Diseases and Tuberculosis","score":0.0031999999191612005,"subfield":{"id":"https://openalex.org/subfields/2725","display_name":"Infectious Diseases"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/mycobacterium-pinnipedii","display_name":"Mycobacterium pinnipedii","score":1.0},{"id":"https://openalex.org/keywords/tuberculosis","display_name":"tuberculosis","score":0.7680000066757202},{"id":"https://openalex.org/keywords/otaria-flavescens","display_name":"Otaria flavescens","score":0.9049999713897705},{"id":"https://openalex.org/keywords/sea-lions","display_name":"sea lions","score":0.7919999957084656},{"id":"https://openalex.org/keywords/zoo-animal-disease","display_name":"zoo animal disease","score":0.5849999785423279},{"id":"https://openalex.org/keywords/mycobacterium-tuberculosis-complex","display_name":"Mycobacterium tuberculosis complex","score":0.8769999742507935},{"id":"https://openalex.org/keywords/spoligotyping","display_name":"spoligotyping","score":0.9409999847412109},{"id":"https://openalex.org/keywords/resistome","display_name":"resistome","score":0.6309999823570251},{"id":"https://openalex.org/keywords/virulome","display_name":"virulome","score":0.9639999866485596},{"id":"https://openalex.org/keywords/macrolide-resistance","display_name":"macrolide resistance","score":0.8309999704360962},{"id":"https://openalex.org/keywords/aminoglycoside-resistance","display_name":"aminoglycoside resistance","score":0.9959999918937683},{"id":"https://openalex.org/keywords/zoonotic-transmission","display_name":"zoonotic transmission","score":0.6100000143051147}],"concepts":[{"id":"https://openalex.org/C2779790121","wikidata":"https://www.wikidata.org/wiki/Q5779917","display_name":"Mycobacterium tuberculosis complex","level":4,"score":0.8426663875579834},{"id":"https://openalex.org/C2781069245","wikidata":"https://www.wikidata.org/wiki/Q12204","display_name":"Tuberculosis","level":2,"score":0.7897140979766846},{"id":"https://openalex.org/C60987743","wikidata":"https://www.wikidata.org/wiki/Q1460232","display_name":"Virulence","level":3,"score":0.602894127368927},{"id":"https://openalex.org/C2777975735","wikidata":"https://www.wikidata.org/wiki/Q130971","display_name":"Mycobacterium tuberculosis","level":3,"score":0.5990948677062988},{"id":"https://openalex.org/C2780374374","wikidata":"https://www.wikidata.org/wiki/Q194309","display_name":"Mycobacterium","level":3,"score":0.5873528718948364},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.5321958065032959},{"id":"https://openalex.org/C89423630","wikidata":"https://www.wikidata.org/wiki/Q7193","display_name":"Microbiology","level":1,"score":0.5262448191642761},{"id":"https://openalex.org/C2778679867","wikidata":"https://www.wikidata.org/wiki/Q1881705","display_name":"Nontuberculous mycobacteria","level":4,"score":0.47092384099960327},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.3450479507446289},{"id":"https://openalex.org/C159047783","wikidata":"https://www.wikidata.org/wiki/Q7215","display_name":"Virology","level":1,"score":0.3277212381362915},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.20519664883613586},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.19469702243804932},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.15817955136299133}],"mesh":[],"locations_count":4,"locations":[{"id":"doi:10.3389/fmicb.2023.1303682","doi":"https://doi.org/10.3389/fmicb.2023.1303682","is_oa":true,"landing_page_url":"https://doi.org/10.3389/fmicb.2023.1303682","pdf_url":null,"source":{"id":"https://openalex.org/S2484704948","display_name":"Frontiers in Microbiology","issn_l":"1664-302X","issn":["1664-302X"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["cwts-core","doaj","jufo-1","ki-jl-1","norway-2","poland-100","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310320527","host_organization_name":"Frontiers Media","host_organization_lineage":["https://openalex.org/P4310320527"],"host_organization_lineage_names":["Frontiers Media"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Frontiers in Microbiology","raw_type":"journal-article"},{"id":"pmh:oai:pubmedcentral.nih.gov:10768177","doi":null,"is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/10768177","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC10768177/pdf/fmicb-14-1303682.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Front Microbiol","raw_type":"Text"},{"id":"pmid:38188565","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/38188565","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Frontiers in microbiology","raw_type":"Journal Article"},{"id":"pmh:oai:doaj.org/article:e17699d3077a483bbd56a748c17ed44b","doi":null,"is_oa":true,"landing_page_url":"https://doaj.org/article/e17699d3077a483bbd56a748c17ed44b","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Frontiers in Microbiology, Vol 14 (2023)","raw_type":"article"}],"best_oa_location":{"id":"doi:10.3389/fmicb.2023.1303682","doi":"https://doi.org/10.3389/fmicb.2023.1303682","is_oa":true,"landing_page_url":"https://doi.org/10.3389/fmicb.2023.1303682","pdf_url":null,"source":{"id":"https://openalex.org/S2484704948","display_name":"Frontiers in Microbiology","issn_l":"1664-302X","issn":["1664-302X"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["cwts-core","doaj","jufo-1","ki-jl-1","norway-2","poland-100","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310320527","host_organization_name":"Frontiers Media","host_organization_lineage":["https://openalex.org/P4310320527"],"host_organization_lineage_names":["Frontiers Media"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Frontiers in Microbiology","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Good health and well-being","score":0.9391000270843506,"id":"https://metadata.un.org/sdg/3"}],"study_designs":[],"awards":[],"funders":[],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4390056868.pdf","grobid_xml":"https://content.openalex.org/works/W4390056868.grobid-xml"},"referenced_works_count":44,"referenced_works":["https://openalex.org/W41997527","https://openalex.org/W1576204477","https://openalex.org/W1920434477","https://openalex.org/W2013603785","https://openalex.org/W2034847904","https://openalex.org/W2040140242","https://openalex.org/W2047978381","https://openalex.org/W2071374987","https://openalex.org/W2096213582","https://openalex.org/W2096595788","https://openalex.org/W2099166958","https://openalex.org/W2099869348","https://openalex.org/W2107772251","https://openalex.org/W2113572346","https://openalex.org/W2117131162","https://openalex.org/W2119497560","https://openalex.org/W2120902911","https://openalex.org/W2131271579","https://openalex.org/W2134558351","https://openalex.org/W2134852597","https://openalex.org/W2135484028","https://openalex.org/W2136155710","https://openalex.org/W2137216983","https://openalex.org/W2141052558","https://openalex.org/W2143553089","https://openalex.org/W2169720428","https://openalex.org/W2581200289","https://openalex.org/W2739323458","https://openalex.org/W2774638123","https://openalex.org/W2789843538","https://openalex.org/W2886063355","https://openalex.org/W2891078715","https://openalex.org/W2908644318","https://openalex.org/W2912507881","https://openalex.org/W2998245056","https://openalex.org/W3046526838","https://openalex.org/W3119034514","https://openalex.org/W3131055609","https://openalex.org/W3138159080","https://openalex.org/W3156458251","https://openalex.org/W3201980636","https://openalex.org/W4220868163","https://openalex.org/W4244918300","https://openalex.org/W4281740151"],"related_works":["https://openalex.org/W2908644318","https://openalex.org/W7110978587","https://openalex.org/W335998397","https://openalex.org/W2013603785","https://openalex.org/W2998245056","https://openalex.org/W2113572346","https://openalex.org/W3047951699","https://openalex.org/W7133311870","https://openalex.org/W3119034514","https://openalex.org/W1990958675"],"abstract_inverted_index":{"Tuberculosis":[0],"(TB)":[1],"affects":[2],"humans":[3],"and":[4,7,56,59,85,89,100,120,123,142,149,158,160,174,205,253],"other":[5,187,256],"animals,":[6],"it":[8,247],"is":[9],"caused":[10,30],"by":[11,108,125,216],"bacteria":[12],"within":[13],"the":[14,24,54,60,83,131,140,145,162,165,172,213,222,242],"Mycobacterium":[15,27,93],"tuberculosis":[16,156,217,244],"complex":[17],"(MTBC).":[18],"In":[19,75],"this":[20,237],"study,":[21,225],"we":[22],"report":[23],"characterisation":[25],"of":[26,139,147,164,167,212,232],"pinnipedii":[28,191,234],"that":[29,130],"a":[31,35,69,111,114],"TB":[32,70],"case":[33],"in":[34,41,82,154,236,255],"sea":[36],"lion":[37],"(Otaria":[38],"flavescens)":[39],"kept":[40],"an":[42],"Italian":[43],"zoo.":[44],"The":[45,104,137],"animal":[46,257],"died":[47],"due":[48],"to":[49,68,92],"severe,":[50],"progressive":[51],"disorders":[52],"involving":[53],"respiratory":[55],"gastro-enteric":[57],"systems":[58],"skin.":[61],"At":[62],"necropsy,":[63],"typical":[64],"gross":[65],"lesions":[66,79],"referable":[67,91],"generalised":[71],"form":[72],"were":[73,80,95],"found.":[74],"particular,":[76],"nodular":[77],"granulomatous":[78],"detected":[81],"lungs":[84],"several":[86],"lymph":[87,102],"nodes,":[88],"colonies":[90],"spp.":[94],"isolated":[96],"from":[97,179,218],"lung,":[98],"mesenteric,":[99],"mediastinal":[101],"nodes.":[103],"isolate":[105,223],"was":[106,121,134],"identified":[107],"PCR":[109],"as":[110,226,228],"MTBC,":[112],"had":[113],"spoligotype":[115],"SB":[116],"1480":[117],"(\u201cseal":[118],"lineage\u201d),":[119],"characterised":[122,124],"whole-genome":[126],"sequencing":[127],"analysis":[128,138],"confirming":[129],"MTBC":[132],"involved":[133],"M.":[135,155,183,190,233,243],"pinnipedii.":[136],"resistome":[141],"virulome":[143],"indicated":[144],"presence":[146,163],"macrolide":[148],"aminoglycoside":[150],"resistance":[151],"genes":[152],"intrinsic":[153],"[erm-37":[157],"aac(2\u2032)-Ic]":[159],"confirmed":[161],"region":[166],"difference":[168],"1":[169],"(RD1),":[170],"harbouring":[171],"esxA":[173],"esxB":[175],"virulence":[176,245],"genes,":[177,246],"differently":[178],"its":[180],"closest":[181],"taxon,":[182],"microti.":[184],"As":[185],"for":[186],"MTCB":[188],"members,":[189],"infection":[192],"can":[193],"spill":[194],"over":[195],"into":[196],"non-pinniped":[197],"mammalian":[198],"species;":[199],"therefore,":[200],"zoological":[201],"gardens,":[202],"veterinary":[203],"practitioners,":[204],"public":[206],"health":[207],"officers":[208],"should":[209],"be":[210],"aware":[211],"hazard":[214],"posed":[215],"marine":[219],"mammals.":[220],"Since":[221],"under":[224],"well":[227],"all":[229,241],"available":[230],"genomes":[231],"investigated":[235],"study":[238],"retains":[239],"almost":[240],"could":[248],"indeed":[249],"cause":[250],"infection,":[251],"lesions,":[252],"disease":[254],"species,":[258],"including":[259],"humans.":[260]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":4}],"updated_date":"2026-11-08T12:12:28.789561","created_date":"2023-12-22T00:00:00"}
