{"id":"https://openalex.org/W4389750211","doi":"https://doi.org/10.1016/j.jfutfo.2023.11.006","title":"Dynamics and functionalities of bacterial community during foxtail millet dough fermentation by metagenomic analysis","display_name":"Dynamics and functionalities of bacterial community during foxtail millet dough fermentation by metagenomic analysis","publication_year":2023,"publication_date":"2023-12-14","ids":{"openalex":"https://openalex.org/W4389750211","doi":"https://doi.org/10.1016/j.jfutfo.2023.11.006"},"language":"en","primary_location":{"id":"doi:10.1016/j.jfutfo.2023.11.006","doi":"https://doi.org/10.1016/j.jfutfo.2023.11.006","is_oa":true,"landing_page_url":"https://doi.org/10.1016/j.jfutfo.2023.11.006","pdf_url":null,"source":{"id":"https://openalex.org/S4210207565","display_name":"Journal of Future Foods","issn_l":"2772-5669","issn":["2772-5669"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["cwts-core","doaj","dongbi-b","jufo-1","oarl","poland-20"],"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Future Foods","raw_type":"journal-article"},"volume":null,"type":"article","is_traditional":true,"indexed_in":["crossref","doaj"],"open_access":{"is_oa":true,"oa_status":"diamond","oa_url":"https://doi.org/10.1016/j.jfutfo.2023.11.006","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5100675324","display_name":"Junli Liu","orcid":"https://orcid.org/0000-0001-8861-3706","observed_orcids":["https://orcid.org/0000-0001-8861-3706"]},"institutions":[{"id":"https://openalex.org/I4210160206","display_name":"Hebei Academy of Agriculture and Forestry Sciences","ror":"https://ror.org/051p3cy55","country_code":"CN","type":"facility","lineage":["https://openalex.org/I4210160206"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Junli Liu","raw_affiliation_strings":["Institute of Biotechnology and Food Science, Hebei Academy of Agriculture and Forestry Sciences, Shijiazhuang 050000, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Biotechnology and Food Science, Hebei Academy of Agriculture and Forestry Sciences, Shijiazhuang 050000, China","institution_ids":["https://openalex.org/I4210160206"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5024245413","display_name":"Wei Zhao","orcid":"https://orcid.org/0000-0003-3957-9788","observed_orcids":["https://orcid.org/0000-0003-3957-9788"]},"institutions":[{"id":"https://openalex.org/I4210160206","display_name":"Hebei Academy of Agriculture and Forestry Sciences","ror":"https://ror.org/051p3cy55","country_code":"CN","type":"facility","lineage":["https://openalex.org/I4210160206"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Wei Zhao","raw_affiliation_strings":["Institute of Biotechnology and Food Science, Hebei Academy of Agriculture and Forestry Sciences, Shijiazhuang 050000, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Biotechnology and Food Science, Hebei Academy of Agriculture and Forestry Sciences, Shijiazhuang 050000, China","institution_ids":["https://openalex.org/I4210160206"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5024555478","display_name":"Aixia Zhang","orcid":"https://orcid.org/0000-0003-0540-5990","observed_orcids":["https://orcid.org/0000-0003-0540-5990"]},"institutions":[{"id":"https://openalex.org/I4210160206","display_name":"Hebei Academy of Agriculture and Forestry Sciences","ror":"https://ror.org/051p3cy55","country_code":"CN","type":"facility","lineage":["https://openalex.org/I4210160206"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Aixia Zhang","raw_affiliation_strings":["Institute of Biotechnology and Food Science, Hebei Academy of Agriculture and Forestry Sciences, Shijiazhuang 050000, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Biotechnology and Food Science, Hebei Academy of Agriculture and Forestry Sciences, Shijiazhuang 050000, China","institution_ids":["https://openalex.org/I4210160206"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5009899384","display_name":"Pengliang Li","orcid":"https://orcid.org/0009-0000-3016-6253","observed_orcids":["https://orcid.org/0009-0000-3016-6253"]},"institutions":[{"id":"https://openalex.org/I4210160206","display_name":"Hebei Academy of Agriculture and Forestry Sciences","ror":"https://ror.org/051p3cy55","country_code":"CN","type":"facility","lineage":["https://openalex.org/I4210160206"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Pengliang Li","raw_affiliation_strings":["Institute of Biotechnology and Food Science, Hebei Academy of Agriculture and Forestry Sciences, Shijiazhuang 050000, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Biotechnology and Food Science, Hebei Academy of Agriculture and Forestry Sciences, Shijiazhuang 050000, China","institution_ids":["https://openalex.org/I4210160206"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5063070090","display_name":"Jingke Liu","orcid":"https://orcid.org/0000-0002-9439-0163","observed_orcids":["https://orcid.org/0000-0002-9439-0163","https://orcid.org/0009-0004-1260-7552"]},"institutions":[{"id":"https://openalex.org/I4210160206","display_name":"Hebei Academy of Agriculture and Forestry Sciences","ror":"https://ror.org/051p3cy55","country_code":"CN","type":"facility","lineage":["https://openalex.org/I4210160206"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Jingke Liu","raw_affiliation_strings":["Institute of Biotechnology and Food Science, Hebei Academy of Agriculture and Forestry Sciences, Shijiazhuang 050000, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Biotechnology and Food Science, Hebei Academy of Agriculture and Forestry Sciences, Shijiazhuang 050000, China","institution_ids":["https://openalex.org/I4210160206"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":["https://openalex.org/A5063070090"],"corresponding_institution_ids":["https://openalex.org/I4210160206"],"apc_list":{"value":0,"currency":"USD","value_usd":0},"apc_paid":null,"fwci":1.9351,"has_fulltext":false,"cited_by_count":17,"citation_normalized_percentile":{"value":0.83175473,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":95,"max":99},"biblio":{"volume":"4","issue":"4","first_page":"343","last_page":"352"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10141","display_name":"Probiotics and Fermented Foods","score":0.9926999807357788,"subfield":{"id":"https://openalex.org/subfields/1106","display_name":"Food Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10141","display_name":"Probiotics and Fermented Foods","score":0.9926999807357788,"subfield":{"id":"https://openalex.org/subfields/1106","display_name":"Food Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10750","display_name":"Fermentation and Sensory Analysis","score":0.00279999990016222,"subfield":{"id":"https://openalex.org/subfields/1106","display_name":"Food Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10066","display_name":"Gut microbiota and health","score":0.0006000000284984708,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/sourdough-fermentation","display_name":"sourdough fermentation","score":0.9620000123977661},{"id":"https://openalex.org/keywords/bacterial-community-dynamics","display_name":"bacterial community dynamics","score":0.8709999918937683},{"id":"https://openalex.org/keywords/heterofermentative-lactic-acid-bacteria","display_name":"heterofermentative lactic acid bacteria","score":0.8999999761581421},{"id":"https://openalex.org/keywords/limosilactobacillus","display_name":"Limosilactobacillus","score":0.9580000042915344},{"id":"https://openalex.org/keywords/pediococcus","display_name":"Pediococcus","score":0.9810000061988831},{"id":"https://openalex.org/keywords/lactiplantibacillus","display_name":"Lactiplantibacillus","score":0.9419999718666077},{"id":"https://openalex.org/keywords/starch-and-sucrose-metabolism","display_name":"starch and sucrose metabolism","score":0.75},{"id":"https://openalex.org/keywords/pyruvate-metabolism","display_name":"pyruvate metabolism","score":0.8289999961853027},{"id":"https://openalex.org/keywords/amino-acid-metabolism","display_name":"amino acid metabolism","score":0.8420000076293945},{"id":"https://openalex.org/keywords/aminopeptidase","display_name":"aminopeptidase","score":0.8769999742507935},{"id":"https://openalex.org/keywords/aminotransferases","display_name":"transaminases","score":0.9620000123977661},{"id":"https://openalex.org/keywords/flavor-formation","display_name":"flavor formation","score":0.5690000057220459},{"id":"https://openalex.org/keywords/lactate-accumulation","display_name":"lactate accumulation","score":0.6499999761581421},{"id":"https://openalex.org/keywords/acetate-accumulation","display_name":"acetate accumulation","score":0.8050000071525574}],"concepts":[{"id":"https://openalex.org/C2777388531","wikidata":"https://www.wikidata.org/wiki/Q3243659","display_name":"Pediococcus","level":4,"score":0.8555853962898254},{"id":"https://openalex.org/C100544194","wikidata":"https://www.wikidata.org/wiki/Q41760","display_name":"Fermentation","level":2,"score":0.7703319787979126},{"id":"https://openalex.org/C2777695942","wikidata":"https://www.wikidata.org/wiki/Q149075","display_name":"Firmicutes","level":4,"score":0.6724457740783691},{"id":"https://openalex.org/C31903555","wikidata":"https://www.wikidata.org/wiki/Q1637030","display_name":"Food science","level":1,"score":0.6416921019554138},{"id":"https://openalex.org/C15151743","wikidata":"https://www.wikidata.org/wiki/Q903778","display_name":"Metagenomics","level":3,"score":0.6109268665313721},{"id":"https://openalex.org/C2780913471","wikidata":"https://www.wikidata.org/wiki/Q134274","display_name":"Lactococcus","level":5,"score":0.593510091304779},{"id":"https://openalex.org/C2775920511","wikidata":"https://www.wikidata.org/wiki/Q161249","display_name":"Lactic acid","level":3,"score":0.5839852690696716},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.529793918132782},{"id":"https://openalex.org/C2780206646","wikidata":"https://www.wikidata.org/wiki/Q1061596","display_name":"Lactobacillus","level":3,"score":0.5146342515945435},{"id":"https://openalex.org/C523546767","wikidata":"https://www.wikidata.org/wiki/Q10876","display_name":"Bacteria","level":2,"score":0.5042043924331665},{"id":"https://openalex.org/C107864789","wikidata":"https://www.wikidata.org/wiki/Q908833","display_name":"Leavening agent","level":3,"score":0.4987523555755615},{"id":"https://openalex.org/C2779676784","wikidata":"https://www.wikidata.org/wiki/Q130999","display_name":"Proteobacteria","level":4,"score":0.4560511112213135},{"id":"https://openalex.org/C2780125375","wikidata":"https://www.wikidata.org/wiki/Q963546","display_name":"Weissella","level":5,"score":0.43047910928726196},{"id":"https://openalex.org/C2776503186","wikidata":"https://www.wikidata.org/wiki/Q2134039","display_name":"Lactobacillus fermentum","level":5,"score":0.41585487127304077},{"id":"https://openalex.org/C2780011460","wikidata":"https://www.wikidata.org/wiki/Q133598","display_name":"Lactococcus lactis","level":4,"score":0.3843977153301239},{"id":"https://openalex.org/C2778859111","wikidata":"https://www.wikidata.org/wiki/Q138793","display_name":"Leuconostoc","level":4,"score":0.3735385537147522},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.34002017974853516},{"id":"https://openalex.org/C2778985185","wikidata":"https://www.wikidata.org/wiki/Q1756682","display_name":"Lactobacillus plantarum","level":4,"score":0.2955380082130432},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C42062724","wikidata":"https://www.wikidata.org/wiki/Q1209205","display_name":"16S ribosomal RNA","level":3,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1016/j.jfutfo.2023.11.006","doi":"https://doi.org/10.1016/j.jfutfo.2023.11.006","is_oa":true,"landing_page_url":"https://doi.org/10.1016/j.jfutfo.2023.11.006","pdf_url":null,"source":{"id":"https://openalex.org/S4210207565","display_name":"Journal of Future Foods","issn_l":"2772-5669","issn":["2772-5669"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["cwts-core","doaj","dongbi-b","jufo-1","oarl","poland-20"],"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Future Foods","raw_type":"journal-article"},{"id":"pmh:oai:doaj.org/article:c283b346db4249dabfbaa788bef63d4a","doi":null,"is_oa":false,"landing_page_url":"https://doaj.org/article/c283b346db4249dabfbaa788bef63d4a","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Journal of Future Foods, Vol 4, Iss 4, Pp 343-352 (2024)","raw_type":"article"}],"best_oa_location":{"id":"doi:10.1016/j.jfutfo.2023.11.006","doi":"https://doi.org/10.1016/j.jfutfo.2023.11.006","is_oa":true,"landing_page_url":"https://doi.org/10.1016/j.jfutfo.2023.11.006","pdf_url":null,"source":{"id":"https://openalex.org/S4210207565","display_name":"Journal of Future Foods","issn_l":"2772-5669","issn":["2772-5669"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["cwts-core","doaj","dongbi-b","jufo-1","oarl","poland-20"],"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Future Foods","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.6735000014305115,"id":"https://metadata.un.org/sdg/2","display_name":"Zero hunger"}],"study_designs":[],"awards":[{"id":"https://openalex.org/G1230666345","display_name":null,"funder_award_id":"CARS-06-14.5-A29","funder_id":"https://openalex.org/F4320327287","funder_display_name":"Ministry of Agriculture and Rural Affairs of the People's Republic of China"}],"funders":[{"id":"https://openalex.org/F4320327287","display_name":"Ministry of Agriculture and Rural Affairs of the People's Republic of China","ror":null},{"id":"https://openalex.org/F4320335447","display_name":"Earmarked Fund for China Agriculture Research System","ror":null}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":54,"referenced_works":["https://openalex.org/W1964341972","https://openalex.org/W1971770375","https://openalex.org/W1973034808","https://openalex.org/W1992890608","https://openalex.org/W2000526744","https://openalex.org/W2010571488","https://openalex.org/W2031137370","https://openalex.org/W2053908108","https://openalex.org/W2067352122","https://openalex.org/W2069330027","https://openalex.org/W2070408108","https://openalex.org/W2072916725","https://openalex.org/W2075896399","https://openalex.org/W2092471412","https://openalex.org/W2133126661","https://openalex.org/W2164070187","https://openalex.org/W2166337262","https://openalex.org/W2166461255","https://openalex.org/W2294353708","https://openalex.org/W2483474470","https://openalex.org/W2551998596","https://openalex.org/W2746704521","https://openalex.org/W2798153795","https://openalex.org/W2803233941","https://openalex.org/W2803294888","https://openalex.org/W2860541859","https://openalex.org/W2889130154","https://openalex.org/W2891491000","https://openalex.org/W2904066077","https://openalex.org/W2916958667","https://openalex.org/W2921051496","https://openalex.org/W2946631431","https://openalex.org/W2956200763","https://openalex.org/W2968340193","https://openalex.org/W2988178326","https://openalex.org/W3009136300","https://openalex.org/W3009177800","https://openalex.org/W3029923550","https://openalex.org/W3033472360","https://openalex.org/W3033659276","https://openalex.org/W3034447411","https://openalex.org/W3048073031","https://openalex.org/W3093912449","https://openalex.org/W3116608007","https://openalex.org/W3131825828","https://openalex.org/W3135158714","https://openalex.org/W3136668826","https://openalex.org/W3177316655","https://openalex.org/W3198872761","https://openalex.org/W3202722080","https://openalex.org/W3205476802","https://openalex.org/W3206204252","https://openalex.org/W3214163226","https://openalex.org/W4224451650"],"related_works":["https://openalex.org/W6960000608","https://openalex.org/W2031137370","https://openalex.org/W7167578141","https://openalex.org/W4412686480","https://openalex.org/W3136668826","https://openalex.org/W4396877905","https://openalex.org/W1985507064","https://openalex.org/W4394863599","https://openalex.org/W6884742271","https://openalex.org/W4416668938"],"abstract_inverted_index":{"Sourdough":[0],"flavors":[1],"were":[2,31,92,100,130],"closely":[3],"related":[4],"to":[5,118,134,169],"microbial":[6,9],"metabolism.":[7],"The":[8],"diversity":[10,26,162],"of":[11,27,158,163],"foxtail":[12],"millet":[13],"dough":[14,36,74,125,164,175],"during":[15,35,73,79],"fermentation":[16],"has":[17],"never":[18],"been":[19],"studied.":[20],"Here,":[21],"the":[22,28,40,44,58,131,159,174],"metabolic":[23],"potential":[24],"and":[25,55,98,107,111,120,124,128,161,167],"bacterial":[29,165],"community":[30],"analyzed":[32],"by":[33],"metagenomic":[34],"fermentation.":[37,67],"Firmicutes":[38],"was":[39,63,69,145],"dominant":[41],"phylum":[42],"in":[43,103,116,140,173],"dough,":[45],"within":[46],"heterofermentative":[47],"lactic":[48,119],"acid":[49,122,142],"bacteria":[50],"(e.g.,":[51],"Companilactobacillus,":[52],"Limosilactobacillus,":[53,96],"Pediococcus":[54,99],"Lactobacillus)":[56],"as":[57],"most":[59],"abundant":[60,72],"bacteria.":[61],"Proteobacteria":[62],"gradually":[64],"inhibited":[65],"after":[66],"Companilactobacillus_crustorum":[68,82],"notably":[70],"found":[71],"leavening.":[75],"Limosilactobacillus_fermentum":[76],"increased":[77],"markedly":[78],"fermentation,":[80],"while":[81],"decreased":[83],"significantly.":[84],"For":[85],"further":[86],"exploration,":[87],"genes":[88],"associated":[89],"with":[90],"metabolism":[91,109,113],"annotated":[93],"through":[94],"metagenomics.":[95],"Companilactobacillus":[97],"actively":[101],"engaged":[102],"glycolysis":[104],"(ko00010),":[105],"starch":[106],"sucrose":[108],"(ko00500),":[110],"pyruvate":[112],"(ko00620),":[114],"leading":[115],"part":[117],"acetic":[121],"accumulations":[123],"acidification.":[126],"Limosilactobacillus":[127],"Lactiplantibacillus":[129],"main":[132],"contributors":[133],"key":[135],"aminopeptidases":[136],"or/and":[137],"transaminases":[138],"involved":[139],"amino":[141],"metabolism,":[143],"which":[144],"responsible":[146],"for":[147,176],"flavor":[148],"metabolite":[149],"formation.":[150],"This":[151],"study":[152],"will":[153],"provide":[154],"an":[155],"enhanced":[156],"understanding":[157],"predominance":[160],"communities,":[166],"contribute":[168],"future":[170],"strain":[171],"screening":[172],"better":[177],"flavor.":[178]},"counts_by_year":[{"year":2026,"cited_by_count":3},{"year":2025,"cited_by_count":11},{"year":2024,"cited_by_count":3}],"updated_date":"2026-11-10T11:39:43.021295","created_date":"2023-12-15T00:00:00"}