{"id":"https://openalex.org/W4389670576","doi":"https://doi.org/10.1016/j.ijregi.2023.12.003","title":"Incorporating direct molecular diagnostics in management algorithms for nontuberculous mycobacteria: Is it high time?","display_name":"Incorporating direct molecular diagnostics in management algorithms for nontuberculous mycobacteria: Is it high time?","publication_year":2023,"publication_date":"2023-12-13","ids":{"openalex":"https://openalex.org/W4389670576","doi":"https://doi.org/10.1016/j.ijregi.2023.12.003","pmid":"https://pubmed.ncbi.nlm.nih.gov/38304760","pmcid":"https://www.ncbi.nlm.nih.gov/pmc/articles/10831244"},"language":"en","primary_location":{"id":"doi:10.1016/j.ijregi.2023.12.003","doi":"https://doi.org/10.1016/j.ijregi.2023.12.003","is_oa":true,"landing_page_url":"https://doi.org/10.1016/j.ijregi.2023.12.003","pdf_url":null,"source":{"id":"https://openalex.org/S4210169834","display_name":"IJID Regions","issn_l":"2772-7076","issn":["2772-7076"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["cwts-core","doaj","norway-1","vabb-shw"],"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IJID Regions","raw_type":"journal-article"},"volume":null,"type":"review","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://doi.org/10.1016/j.ijregi.2023.12.003","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5023157477","display_name":"Christoffel Johannes Opperman","orcid":"https://orcid.org/0000-0002-6676-5431","observed_orcids":["https://orcid.org/0000-0002-6676-5431"]},"institutions":[{"id":"https://openalex.org/I107920810","display_name":"National Health Laboratory Service","ror":"https://ror.org/00znvbk37","country_code":"ZA","type":"government","lineage":["https://openalex.org/I107920810"]},{"id":"https://openalex.org/I10947320","display_name":"South African Medical Research Council","ror":"https://ror.org/05q60vz69","country_code":"ZA","type":"other","lineage":["https://openalex.org/I10947320"]},{"id":"https://openalex.org/I157614274","display_name":"University of Cape Town","ror":"https://ror.org/03p74gp79","country_code":"ZA","type":"education","lineage":["https://openalex.org/I157614274"]},{"id":"https://openalex.org/I26092322","display_name":"Stellenbosch University","ror":"https://ror.org/05bk57929","country_code":"ZA","type":"education","lineage":["https://openalex.org/I26092322"]}],"countries":["ZA"],"is_corresponding":true,"raw_author_name":"Christoffel Johannes Opperman","raw_affiliation_strings":["Division of Medical Microbiology, Department of Pathology, University of Cape Town, Cape Town, South Africa","National Health Laboratory Service, Green Point TB Laboratory, Cape Town, South Africa","SAMRC Centre for Tuberculosis Research, Division of Molecular Biology and Human Genetics, Stellenbosch University, Cape Town, South Africa"],"raw_orcid":"https://orcid.org/0000-0002-6676-5431","affiliations":[{"raw_affiliation_string":"Division of Medical Microbiology, Department of Pathology, University of Cape Town, Cape Town, South Africa","institution_ids":["https://openalex.org/I157614274"]},{"raw_affiliation_string":"National Health Laboratory Service, Green Point TB Laboratory, Cape Town, South Africa","institution_ids":["https://openalex.org/I107920810"]},{"raw_affiliation_string":"SAMRC Centre for Tuberculosis Research, Division of Molecular Biology and Human Genetics, Stellenbosch University, Cape Town, South Africa","institution_ids":["https://openalex.org/I10947320","https://openalex.org/I26092322"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5077363433","display_name":"Sarishna Singh","orcid":"https://orcid.org/0000-0002-1794-4126","observed_orcids":["https://orcid.org/0000-0002-1794-4126"]},"institutions":[{"id":"https://openalex.org/I107920810","display_name":"National Health Laboratory Service","ror":"https://ror.org/00znvbk37","country_code":"ZA","type":"government","lineage":["https://openalex.org/I107920810"]},{"id":"https://openalex.org/I10947320","display_name":"South African Medical Research Council","ror":"https://ror.org/05q60vz69","country_code":"ZA","type":"other","lineage":["https://openalex.org/I10947320"]},{"id":"https://openalex.org/I26092322","display_name":"Stellenbosch University","ror":"https://ror.org/05bk57929","country_code":"ZA","type":"education","lineage":["https://openalex.org/I26092322"]}],"countries":["ZA"],"is_corresponding":false,"raw_author_name":"Sarishna Singh","raw_affiliation_strings":["National Health Laboratory Service, Green Point TB Laboratory, Cape Town, South Africa","SAMRC Centre for Tuberculosis Research, Division of Molecular Biology and Human Genetics, Stellenbosch University, Cape Town, South Africa"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"National Health Laboratory Service, Green Point TB Laboratory, Cape Town, South Africa","institution_ids":["https://openalex.org/I107920810"]},{"raw_affiliation_string":"SAMRC Centre for Tuberculosis Research, Division of Molecular Biology and Human Genetics, Stellenbosch University, Cape Town, South Africa","institution_ids":["https://openalex.org/I10947320","https://openalex.org/I26092322"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5031164044","display_name":"Wynand J. Goosen","orcid":"https://orcid.org/0000-0001-6614-9084","observed_orcids":["https://orcid.org/0000-0001-6614-9084"]},"institutions":[{"id":"https://openalex.org/I10947320","display_name":"South African Medical Research Council","ror":"https://ror.org/05q60vz69","country_code":"ZA","type":"other","lineage":["https://openalex.org/I10947320"]},{"id":"https://openalex.org/I26092322","display_name":"Stellenbosch University","ror":"https://ror.org/05bk57929","country_code":"ZA","type":"education","lineage":["https://openalex.org/I26092322"]}],"countries":["ZA"],"is_corresponding":false,"raw_author_name":"Wynand Goosen","raw_affiliation_strings":["SAMRC Centre for Tuberculosis Research, Division of Molecular Biology and Human Genetics, Stellenbosch University, Cape Town, South Africa"],"raw_orcid":"https://orcid.org/0000-0001-6614-9084","affiliations":[{"raw_affiliation_string":"SAMRC Centre for Tuberculosis Research, Division of Molecular Biology and Human Genetics, Stellenbosch University, Cape Town, South Africa","institution_ids":["https://openalex.org/I10947320","https://openalex.org/I26092322"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5039727606","display_name":"Helen Suzanne Cox","orcid":"https://orcid.org/0000-0002-6538-7192","observed_orcids":["https://orcid.org/0000-0002-6538-7192"]},"institutions":[{"id":"https://openalex.org/I157614274","display_name":"University of Cape Town","ror":"https://ror.org/03p74gp79","country_code":"ZA","type":"education","lineage":["https://openalex.org/I157614274"]},{"id":"https://openalex.org/I4210138455","display_name":"Wellcome Centre for Infectious Diseases Research in Africa","ror":"https://ror.org/040b19m18","country_code":"ZA","type":"facility","lineage":["https://openalex.org/I157614274","https://openalex.org/I4210138455","https://openalex.org/I87048295"]},{"id":"https://openalex.org/I4405266898","display_name":"Institute of Infectious Disease and Molecular Medicine","ror":"https://ror.org/00900dw59","country_code":"ZA","type":"education","lineage":["https://openalex.org/I157614274","https://openalex.org/I4405266898"]}],"countries":["ZA"],"is_corresponding":false,"raw_author_name":"Helen Cox","raw_affiliation_strings":["Division of Medical Microbiology, Institute of Infectious Disease and Molecular Medicine and Wellcome Centre for Infectious Disease Research, University of Cape Town, Cape Town, South Africa"],"raw_orcid":"https://orcid.org/0000-0002-6538-7192","affiliations":[{"raw_affiliation_string":"Division of Medical Microbiology, Institute of Infectious Disease and Molecular Medicine and Wellcome Centre for Infectious Disease Research, University of Cape Town, Cape Town, South Africa","institution_ids":["https://openalex.org/I157614274","https://openalex.org/I4210138455","https://openalex.org/I4405266898"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5021801489","display_name":"Robin M. Warren","orcid":"https://orcid.org/0000-0001-5741-7358","observed_orcids":["https://orcid.org/0000-0001-5741-7358"]},"institutions":[{"id":"https://openalex.org/I10947320","display_name":"South African Medical Research Council","ror":"https://ror.org/05q60vz69","country_code":"ZA","type":"other","lineage":["https://openalex.org/I10947320"]},{"id":"https://openalex.org/I26092322","display_name":"Stellenbosch University","ror":"https://ror.org/05bk57929","country_code":"ZA","type":"education","lineage":["https://openalex.org/I26092322"]}],"countries":["ZA"],"is_corresponding":false,"raw_author_name":"Rob Warren","raw_affiliation_strings":["SAMRC Centre for Tuberculosis Research, Division of Molecular Biology and Human Genetics, Stellenbosch University, Cape Town, South Africa"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"SAMRC Centre for Tuberculosis Research, Division of Molecular Biology and Human Genetics, Stellenbosch University, Cape Town, South Africa","institution_ids":["https://openalex.org/I10947320","https://openalex.org/I26092322"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5006317460","display_name":"Aliasgar Esmail","orcid":"https://orcid.org/0000-0002-1835-9252","observed_orcids":["https://orcid.org/0000-0002-1835-9252"]},"institutions":[{"id":"https://openalex.org/I157614274","display_name":"University of Cape Town","ror":"https://ror.org/03p74gp79","country_code":"ZA","type":"education","lineage":["https://openalex.org/I157614274"]},{"id":"https://openalex.org/I2802258008","display_name":"Groote Schuur Hospital","ror":"https://ror.org/00c879s84","country_code":"ZA","type":"healthcare","lineage":["https://openalex.org/I1307091933","https://openalex.org/I2802258008"]}],"countries":["ZA"],"is_corresponding":false,"raw_author_name":"Aliasgar Esmail","raw_affiliation_strings":["UCT Lung Institute, Centre for Lung Infection and Immunity, Division of Pulmonology, Department of Medicine, University of Cape Town, & Groote Schuur Hospital"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"UCT Lung Institute, Centre for Lung Infection and Immunity, Division of Pulmonology, Department of Medicine, University of Cape Town, & Groote Schuur Hospital","institution_ids":["https://openalex.org/I157614274","https://openalex.org/I2802258008"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":7,"corresponding_author_ids":["https://openalex.org/A5023157477"],"corresponding_institution_ids":["https://openalex.org/I107920810","https://openalex.org/I10947320","https://openalex.org/I157614274","https://openalex.org/I26092322"],"apc_list":{"value":1200,"currency":"USD","value_usd":1200},"apc_paid":{"value":1200,"currency":"USD","value_usd":1200},"fwci":0.477,"has_fulltext":true,"cited_by_count":12,"citation_normalized_percentile":{"value":0.47690763,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":95,"max":98},"biblio":{"volume":"10","issue":null,"first_page":"140","last_page":"145"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11316","display_name":"Mycobacterium research and diagnosis","score":0.9970999956130981,"subfield":{"id":"https://openalex.org/subfields/2713","display_name":"Epidemiology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T11316","display_name":"Mycobacterium research and diagnosis","score":0.9970999956130981,"subfield":{"id":"https://openalex.org/subfields/2713","display_name":"Epidemiology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T12317","display_name":"Actinomycetales infections and treatment","score":0.0015999999595806003,"subfield":{"id":"https://openalex.org/subfields/2726","display_name":"Microbiology (medical)"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T12167","display_name":"Bacterial Identification and Susceptibility Testing","score":0.0003000000142492354,"subfield":{"id":"https://openalex.org/subfields/2726","display_name":"Microbiology (medical)"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/nontuberculous-mycobacteria","display_name":"nontuberculous mycobacteria","score":0.9990000128746033},{"id":"https://openalex.org/keywords/pulmonary-ntm-disease","display_name":"pulmonary NTM infection","score":0.9679999947547913},{"id":"https://openalex.org/keywords/diagnostic-algorithm","display_name":"diagnostic algorithm","score":0.656000018119812},{"id":"https://openalex.org/keywords/sputum","display_name":"sputum","score":0.5680000185966492},{"id":"https://openalex.org/keywords/targeted-deep-sequencing","display_name":"targeted deep sequencing","score":0.7799999713897705},{"id":"https://openalex.org/keywords/sanger-sequencing","display_name":"Sanger sequencing","score":0.8510000109672546},{"id":"https://openalex.org/keywords/culture-based-identification","display_name":"culture-based identification","score":0.6800000071525574},{"id":"https://openalex.org/keywords/rapid-diagnosis","display_name":"rapid diagnosis","score":0.6320000290870667},{"id":"https://openalex.org/keywords/treatment-initiation","display_name":"treatment initiation","score":0.6019999980926514}],"concepts":[{"id":"https://openalex.org/C2778679867","wikidata":"https://www.wikidata.org/wiki/Q1881705","display_name":"Nontuberculous mycobacteria","level":4,"score":0.7639814615249634},{"id":"https://openalex.org/C2776301714","wikidata":"https://www.wikidata.org/wiki/Q259346","display_name":"Sputum","level":3,"score":0.6122394800186157},{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.5830881595611572},{"id":"https://openalex.org/C2780374374","wikidata":"https://www.wikidata.org/wiki/Q194309","display_name":"Mycobacterium","level":3,"score":0.5466606020927429},{"id":"https://openalex.org/C2779790121","wikidata":"https://www.wikidata.org/wiki/Q5779917","display_name":"Mycobacterium tuberculosis complex","level":4,"score":0.5435736775398254},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.5389081239700317},{"id":"https://openalex.org/C2781069245","wikidata":"https://www.wikidata.org/wiki/Q12204","display_name":"Tuberculosis","level":2,"score":0.5329528450965881},{"id":"https://openalex.org/C76818968","wikidata":"https://www.wikidata.org/wiki/Q181940","display_name":"Sanger sequencing","level":4,"score":0.5245566368103027},{"id":"https://openalex.org/C2779134260","wikidata":"https://www.wikidata.org/wiki/Q12136","display_name":"Disease","level":2,"score":0.5021424293518066},{"id":"https://openalex.org/C2992779976","wikidata":"https://www.wikidata.org/wiki/Q3286546","display_name":"Pulmonary disease","level":2,"score":0.4419862926006317},{"id":"https://openalex.org/C2780931024","wikidata":"https://www.wikidata.org/wiki/Q4044720","display_name":"Mycobacterium kansasii","level":4,"score":0.42844170331954956},{"id":"https://openalex.org/C2781455004","wikidata":"https://www.wikidata.org/wiki/Q3311330","display_name":"Mycobacterium avium complex","level":2,"score":0.41925573348999023},{"id":"https://openalex.org/C2777975735","wikidata":"https://www.wikidata.org/wiki/Q130971","display_name":"Mycobacterium tuberculosis","level":3,"score":0.3830105662345886},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.2610916793346405},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.24921965599060059},{"id":"https://openalex.org/C126322002","wikidata":"https://www.wikidata.org/wiki/Q11180","display_name":"Internal medicine","level":1,"score":0.23647698760032654},{"id":"https://openalex.org/C51679486","wikidata":"https://www.wikidata.org/wiki/Q380546","display_name":"DNA sequencing","level":3,"score":0.2340041697025299},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.09696066379547119},{"id":"https://openalex.org/C552990157","wikidata":"https://www.wikidata.org/wiki/Q7430","display_name":"DNA","level":2,"score":0.0},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.0}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1016/j.ijregi.2023.12.003","doi":"https://doi.org/10.1016/j.ijregi.2023.12.003","is_oa":true,"landing_page_url":"https://doi.org/10.1016/j.ijregi.2023.12.003","pdf_url":null,"source":{"id":"https://openalex.org/S4210169834","display_name":"IJID Regions","issn_l":"2772-7076","issn":["2772-7076"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["cwts-core","doaj","norway-1","vabb-shw"],"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IJID Regions","raw_type":"journal-article"},{"id":"pmh:oai:pubmedcentral.nih.gov:10831244","doi":null,"is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/10831244","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC10831244/pdf/main.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IJID Reg","raw_type":"Text"},{"id":"pmid:38304760","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/38304760","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IJID regions","raw_type":"Journal Article"}],"best_oa_location":{"id":"doi:10.1016/j.ijregi.2023.12.003","doi":"https://doi.org/10.1016/j.ijregi.2023.12.003","is_oa":true,"landing_page_url":"https://doi.org/10.1016/j.ijregi.2023.12.003","pdf_url":null,"source":{"id":"https://openalex.org/S4210169834","display_name":"IJID Regions","issn_l":"2772-7076","issn":["2772-7076"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["cwts-core","doaj","norway-1","vabb-shw"],"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IJID Regions","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/3","score":0.9537000060081482,"display_name":"Good health and well-being"}],"study_designs":[],"awards":[{"id":"https://openalex.org/G2909740937","display_name":null,"funder_award_id":"PR2232714","funder_id":"https://openalex.org/F4320311904","funder_display_name":"Wellcome Trust"},{"id":"https://openalex.org/G5766603965","display_name":"Improved surveillance of zoonotic Mycobacteria through rapid direct detection and genotyping in livestock, wildlife, and their environment from low-resource areas in South Africa.","funder_award_id":"222941/Z/21/Z","funder_id":"https://openalex.org/F4320311904","funder_display_name":"Wellcome Trust"}],"funders":[{"id":"https://openalex.org/F4320311904","display_name":"Wellcome Trust","ror":"https://ror.org/029chgv08"},{"id":"https://openalex.org/F4320320672","display_name":"South African Medical Research Council","ror":"https://ror.org/05q60vz69"},{"id":"https://openalex.org/F4320322663","display_name":"Universiteit Stellenbosch","ror":"https://ror.org/05bk57929"},{"id":"https://openalex.org/F4320322697","display_name":"Harry Crossley Foundation","ror":"https://ror.org/03t1asa17"},{"id":"https://openalex.org/F4320326620","display_name":"National Health Laboratory Service","ror":"https://ror.org/00znvbk37"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4389670576.pdf","grobid_xml":"https://content.openalex.org/works/W4389670576.grobid-xml"},"referenced_works_count":41,"referenced_works":["https://openalex.org/W2021779290","https://openalex.org/W2049808126","https://openalex.org/W2176025278","https://openalex.org/W2335527766","https://openalex.org/W2337209686","https://openalex.org/W2469428763","https://openalex.org/W2735480878","https://openalex.org/W2770318071","https://openalex.org/W2912016683","https://openalex.org/W2949601837","https://openalex.org/W2983448844","https://openalex.org/W3004200723","https://openalex.org/W3010165345","https://openalex.org/W3038927358","https://openalex.org/W3081962918","https://openalex.org/W3082671817","https://openalex.org/W3119013605","https://openalex.org/W3135659982","https://openalex.org/W3136909730","https://openalex.org/W3162212249","https://openalex.org/W3190654668","https://openalex.org/W3211315884","https://openalex.org/W4206988680","https://openalex.org/W4213458087","https://openalex.org/W4220652040","https://openalex.org/W4220817898","https://openalex.org/W4221021094","https://openalex.org/W4224116240","https://openalex.org/W4224596134","https://openalex.org/W4224979073","https://openalex.org/W4239396218","https://openalex.org/W4289344031","https://openalex.org/W4296449579","https://openalex.org/W4308974180","https://openalex.org/W4310069758","https://openalex.org/W4312016803","https://openalex.org/W4372278976","https://openalex.org/W4383998551","https://openalex.org/W4385454760","https://openalex.org/W4386699708","https://openalex.org/W4388158038"],"related_works":["https://openalex.org/W2778256309","https://openalex.org/W3190114767","https://openalex.org/W2327420462","https://openalex.org/W4317908169","https://openalex.org/W2018511840","https://openalex.org/W7018525494","https://openalex.org/W4392713914","https://openalex.org/W7166800355","https://openalex.org/W7140272131","https://openalex.org/W2998206416"],"abstract_inverted_index":{"complex":[0],"(MTBC)":[1],"that":[2,6,52],"cause":[3],"pulmonary":[4,21,86],"disease":[5,11,23],"is":[7],"similar":[8],"to":[9],"the":[10,18,44],"caused":[12],"by":[13,47],"MTBC.":[14],"International":[15],"guidelines":[16],"for":[17,30],"diagnosis":[19,84],"of":[20,57,85],"NTM":[22,58,87,110],"are":[24],"rigid":[25],"and":[26,94,100],"have":[27],"remained":[28],"unchanged":[29],"nearly":[31],"2":[32],"decades.":[33],"In":[34],"this":[35],"opinion":[36],"piece,":[37],"we":[38],"provide":[39],"a":[40,49,81],"new":[41],"perspective":[42],"on":[43,60],"traditional":[45,75],"criteria":[46],"suggesting":[48],"diagnostic":[50],"algorithm":[51],"incorporates":[53],"direct":[54],"molecular":[55,106],"identification":[56,111],"performed":[59],"raw":[61],"sputum":[62],"specimens":[63],"(using":[64],"Sanger":[65],"or":[66],"targeted":[67],"deep":[68],"sequencing":[69],"approaches,":[70],"among":[71],"others)":[72],"paired":[73],"with":[74],"culture":[76],"methods.":[77],"Our":[78],"approach":[79],"ensures":[80],"more":[82],"rapid":[83],"disease,":[88],"thus,":[89],"facilitating":[90],"timeous":[91],"clinical":[92],"diagnosis,":[93],"prompt":[95],"treatment":[96],"initiation,":[97],"where":[98],"indicated,":[99],"leverages":[101],"recent":[102],"advances":[103],"in":[104],"novel":[105],"techniques":[107],"into":[108],"routine":[109],"practice.":[112]},"counts_by_year":[{"year":2026,"cited_by_count":3},{"year":2025,"cited_by_count":6},{"year":2024,"cited_by_count":3}],"updated_date":"2026-11-04T10:54:05.112534","created_date":"2023-12-14T00:00:00"}