{"id":"https://openalex.org/W4389628831","doi":"https://doi.org/10.1093/bib/bbad454","title":"Response to the letter \u2018testing the effectiveness of MyPROSLE in classifying patients with lupus nephritis\u2019","display_name":"Response to the letter \u2018testing the effectiveness of MyPROSLE in classifying patients with lupus nephritis\u2019","publication_year":2023,"publication_date":"2023-11-22","ids":{"openalex":"https://openalex.org/W4389628831","doi":"https://doi.org/10.1093/bib/bbad454","pmid":"https://pubmed.ncbi.nlm.nih.gov/38084921","pmcid":"https://www.ncbi.nlm.nih.gov/pmc/articles/10753528"},"language":"en","primary_location":{"id":"doi:10.1093/bib/bbad454","doi":"https://doi.org/10.1093/bib/bbad454","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbad454","pdf_url":"https://academic.oup.com/bib/article-pdf/25/1/bbad454/54256342/bbad454.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"listed_in":["ccf-b","cwts-core","doaj","dongbi-b","doyens","jufo-2","ki-jl-2","medline","norway-2","oarl","poland-140","russia-white-list-1"],"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"volume":null,"type":"letter","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://academic.oup.com/bib/article-pdf/25/1/bbad454/54256342/bbad454.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5085159862","display_name":"Daniel Toro\u2010Dom\u00ednguez","orcid":"https://orcid.org/0000-0001-8440-312X","observed_orcids":["https://orcid.org/0000-0001-8440-312X"]},"institutions":[{"id":"https://openalex.org/I173304897","display_name":"Universidad de Granada","ror":"https://ror.org/04njjy449","country_code":"ES","type":"education","lineage":["https://openalex.org/I173304897"]},{"id":"https://openalex.org/I4210142177","display_name":"Pfizer-University of Granada-Junta de Andaluc\u00eda Centre for Genomics and Oncological Research","ror":"https://ror.org/04hr99439","country_code":"ES","type":"facility","lineage":["https://openalex.org/I4210142177"]}],"countries":["ES"],"is_corresponding":true,"raw_author_name":"Daniel Toro-Dom\u00ednguez","raw_affiliation_strings":["GENYO. Centre for Genomics and Oncological Research: Pfizer, University of Granada, Andalusian Regional Government, PTS Granada , Avenida de la Ilustraci\u00f3n 114, 18016, Granada , Spain"],"raw_orcid":"https://orcid.org/0000-0001-8440-312X","affiliations":[{"raw_affiliation_string":"GENYO. Centre for Genomics and Oncological Research: Pfizer, University of Granada, Andalusian Regional Government, PTS Granada , Avenida de la Ilustraci\u00f3n 114, 18016, Granada , Spain","institution_ids":["https://openalex.org/I173304897","https://openalex.org/I4210142177"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5018778757","display_name":"Jordi Martorell\u2010Marug\u00e1n","orcid":"https://orcid.org/0000-0002-5186-0735","observed_orcids":["https://orcid.org/0000-0002-5186-0735"]},"institutions":[{"id":"https://openalex.org/I173304897","display_name":"Universidad de Granada","ror":"https://ror.org/04njjy449","country_code":"ES","type":"education","lineage":["https://openalex.org/I173304897"]},{"id":"https://openalex.org/I4210142177","display_name":"Pfizer-University of Granada-Junta de Andaluc\u00eda Centre for Genomics and Oncological Research","ror":"https://ror.org/04hr99439","country_code":"ES","type":"facility","lineage":["https://openalex.org/I4210142177"]},{"id":"https://openalex.org/I4405267228","display_name":"Fundaci\u00f3n para la Investigaci\u00f3n Biosanitaria de Andaluc\u00eda Oriental - Alejandro Otero","ror":"https://ror.org/01s9yx644","country_code":"ES","type":"nonprofit","lineage":["https://openalex.org/I4405267228"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Jordi Martorell-Marug\u00e1n","raw_affiliation_strings":["Fundaci\u00f3n para la Investigaci\u00f3n Biosanitaria de Andaluc\u00eda Oriental-Alejandro Otero (FIBAO) , 18012, Granada , Spain","GENYO. Centre for Genomics and Oncological Research: Pfizer, University of Granada, Andalusian Regional Government, PTS Granada , Avenida de la Ilustraci\u00f3n 114, 18016, Granada , Spain"],"raw_orcid":"https://orcid.org/0000-0002-5186-0735","affiliations":[{"raw_affiliation_string":"Fundaci\u00f3n para la Investigaci\u00f3n Biosanitaria de Andaluc\u00eda Oriental-Alejandro Otero (FIBAO) , 18012, Granada , Spain","institution_ids":["https://openalex.org/I4405267228"]},{"raw_affiliation_string":"GENYO. Centre for Genomics and Oncological Research: Pfizer, University of Granada, Andalusian Regional Government, PTS Granada , Avenida de la Ilustraci\u00f3n 114, 18016, Granada , Spain","institution_ids":["https://openalex.org/I173304897","https://openalex.org/I4210142177"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5081741563","display_name":"Manuel Mart\u00ednez\u2010Bueno","orcid":"https://orcid.org/0000-0002-4333-4487","observed_orcids":["https://orcid.org/0000-0002-4333-4487"]},"institutions":[{"id":"https://openalex.org/I173304897","display_name":"Universidad de Granada","ror":"https://ror.org/04njjy449","country_code":"ES","type":"education","lineage":["https://openalex.org/I173304897"]},{"id":"https://openalex.org/I4210142177","display_name":"Pfizer-University of Granada-Junta de Andaluc\u00eda Centre for Genomics and Oncological Research","ror":"https://ror.org/04hr99439","country_code":"ES","type":"facility","lineage":["https://openalex.org/I4210142177"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Manuel Martinez-Bueno","raw_affiliation_strings":["GENYO. Centre for Genomics and Oncological Research: Pfizer, University of Granada, Andalusian Regional Government, PTS Granada , Avenida de la Ilustraci\u00f3n 114, 18016, Granada , Spain"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"GENYO. Centre for Genomics and Oncological Research: Pfizer, University of Granada, Andalusian Regional Government, PTS Granada , Avenida de la Ilustraci\u00f3n 114, 18016, Granada , Spain","institution_ids":["https://openalex.org/I173304897","https://openalex.org/I4210142177"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5045696966","display_name":"Ra\u00fal L\u00f3pez-Dom\u00ednguez","orcid":"https://orcid.org/0000-0001-8634-117X","observed_orcids":["https://orcid.org/0000-0001-8634-117X"]},"institutions":[{"id":"https://openalex.org/I173304897","display_name":"Universidad de Granada","ror":"https://ror.org/04njjy449","country_code":"ES","type":"education","lineage":["https://openalex.org/I173304897"]},{"id":"https://openalex.org/I4210142177","display_name":"Pfizer-University of Granada-Junta de Andaluc\u00eda Centre for Genomics and Oncological Research","ror":"https://ror.org/04hr99439","country_code":"ES","type":"facility","lineage":["https://openalex.org/I4210142177"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Ra\u00fal L\u00f3pez-Dom\u00ednguez","raw_affiliation_strings":["Department of Statistics, University of Granada , 18071, Granada , Spain","GENYO. Centre for Genomics and Oncological Research: Pfizer, University of Granada, Andalusian Regional Government, PTS Granada , Avenida de la Ilustraci\u00f3n 114, 18016, Granada , Spain"],"raw_orcid":"https://orcid.org/0000-0001-8634-117X","affiliations":[{"raw_affiliation_string":"Department of Statistics, University of Granada , 18071, Granada , Spain","institution_ids":["https://openalex.org/I173304897"]},{"raw_affiliation_string":"GENYO. Centre for Genomics and Oncological Research: Pfizer, University of Granada, Andalusian Regional Government, PTS Granada , Avenida de la Ilustraci\u00f3n 114, 18016, Granada , Spain","institution_ids":["https://openalex.org/I173304897","https://openalex.org/I4210142177"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5018467489","display_name":"Elena Carnero\u2010Montoro","orcid":"https://orcid.org/0000-0002-1947-9627","observed_orcids":["https://orcid.org/0000-0002-1947-9627"]},"institutions":[{"id":"https://openalex.org/I173304897","display_name":"Universidad de Granada","ror":"https://ror.org/04njjy449","country_code":"ES","type":"education","lineage":["https://openalex.org/I173304897"]},{"id":"https://openalex.org/I4210142177","display_name":"Pfizer-University of Granada-Junta de Andaluc\u00eda Centre for Genomics and Oncological Research","ror":"https://ror.org/04hr99439","country_code":"ES","type":"facility","lineage":["https://openalex.org/I4210142177"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Elena Carnero-Montoro","raw_affiliation_strings":["GENYO. Centre for Genomics and Oncological Research: Pfizer, University of Granada, Andalusian Regional Government, PTS Granada , Avenida de la Ilustraci\u00f3n 114, 18016, Granada , Spain"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"GENYO. Centre for Genomics and Oncological Research: Pfizer, University of Granada, Andalusian Regional Government, PTS Granada , Avenida de la Ilustraci\u00f3n 114, 18016, Granada , Spain","institution_ids":["https://openalex.org/I173304897","https://openalex.org/I4210142177"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5039320926","display_name":"Guillermo Barturen","orcid":"https://orcid.org/0000-0003-2103-1028","observed_orcids":["https://orcid.org/0000-0003-2103-1028"]},"institutions":[{"id":"https://openalex.org/I173304897","display_name":"Universidad de Granada","ror":"https://ror.org/04njjy449","country_code":"ES","type":"education","lineage":["https://openalex.org/I173304897"]},{"id":"https://openalex.org/I4210142177","display_name":"Pfizer-University of Granada-Junta de Andaluc\u00eda Centre for Genomics and Oncological Research","ror":"https://ror.org/04hr99439","country_code":"ES","type":"facility","lineage":["https://openalex.org/I4210142177"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Guillermo Barturen","raw_affiliation_strings":["GENYO. Centre for Genomics and Oncological Research: Pfizer, University of Granada, Andalusian Regional Government, PTS Granada , Avenida de la Ilustraci\u00f3n 114, 18016, Granada , Spain"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"GENYO. Centre for Genomics and Oncological Research: Pfizer, University of Granada, Andalusian Regional Government, PTS Granada , Avenida de la Ilustraci\u00f3n 114, 18016, Granada , Spain","institution_ids":["https://openalex.org/I173304897","https://openalex.org/I4210142177"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5030871426","display_name":"DANIEL W. GOLDMAN","orcid":"https://orcid.org/0000-0001-5003-3503","observed_orcids":["https://orcid.org/0000-0001-5003-3503","https://orcid.org/0000-0002-0013-1188"]},"institutions":[{"id":"https://openalex.org/I145311948","display_name":"Johns Hopkins University","ror":"https://ror.org/00za53h95","country_code":"US","type":"education","lineage":["https://openalex.org/I145311948"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Daniel Goldman","raw_affiliation_strings":["Johns Hopkins University School of Medicine , Baltimore, Maryland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Johns Hopkins University School of Medicine , Baltimore, Maryland","institution_ids":["https://openalex.org/I145311948"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5082713013","display_name":"Michelle Petri","orcid":"https://orcid.org/0000-0003-1441-5373","observed_orcids":["https://orcid.org/0000-0003-1441-5373"]},"institutions":[{"id":"https://openalex.org/I145311948","display_name":"Johns Hopkins University","ror":"https://ror.org/00za53h95","country_code":"US","type":"education","lineage":["https://openalex.org/I145311948"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Michelle Petri","raw_affiliation_strings":["Johns Hopkins University School of Medicine , Baltimore, Maryland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Johns Hopkins University School of Medicine , Baltimore, Maryland","institution_ids":["https://openalex.org/I145311948"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5079394518","display_name":"Pedro Carmona\u2010S\u00e1ez","orcid":"https://orcid.org/0000-0002-6173-7255","observed_orcids":["https://orcid.org/0000-0002-6173-7255"]},"institutions":[{"id":"https://openalex.org/I173304897","display_name":"Universidad de Granada","ror":"https://ror.org/04njjy449","country_code":"ES","type":"education","lineage":["https://openalex.org/I173304897"]},{"id":"https://openalex.org/I4210142177","display_name":"Pfizer-University of Granada-Junta de Andaluc\u00eda Centre for Genomics and Oncological Research","ror":"https://ror.org/04hr99439","country_code":"ES","type":"facility","lineage":["https://openalex.org/I4210142177"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Pedro Carmona-S\u00e1ez","raw_affiliation_strings":["Department of Statistics, University of Granada , 18071, Granada , Spain","GENYO. Centre for Genomics and Oncological Research: Pfizer, University of Granada, Andalusian Regional Government, PTS Granada , Avenida de la Ilustraci\u00f3n 114, 18016, Granada , Spain"],"raw_orcid":"https://orcid.org/0000-0002-6173-7255","affiliations":[{"raw_affiliation_string":"Department of Statistics, University of Granada , 18071, Granada , Spain","institution_ids":["https://openalex.org/I173304897"]},{"raw_affiliation_string":"GENYO. Centre for Genomics and Oncological Research: Pfizer, University of Granada, Andalusian Regional Government, PTS Granada , Avenida de la Ilustraci\u00f3n 114, 18016, Granada , Spain","institution_ids":["https://openalex.org/I173304897","https://openalex.org/I4210142177"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5052973247","display_name":"Marta Eugenia Alarc\u00f3n-Riquelme","orcid":"https://orcid.org/0000-0002-7632-4154","observed_orcids":["https://orcid.org/0000-0002-7632-4154","https://orcid.org/0000-0002-5649-3321"]},"institutions":[{"id":"https://openalex.org/I173304897","display_name":"Universidad de Granada","ror":"https://ror.org/04njjy449","country_code":"ES","type":"education","lineage":["https://openalex.org/I173304897"]},{"id":"https://openalex.org/I28166907","display_name":"Karolinska Institutet","ror":"https://ror.org/056d84691","country_code":"SE","type":"education","lineage":["https://openalex.org/I28166907"]},{"id":"https://openalex.org/I4210142177","display_name":"Pfizer-University of Granada-Junta de Andaluc\u00eda Centre for Genomics and Oncological Research","ror":"https://ror.org/04hr99439","country_code":"ES","type":"facility","lineage":["https://openalex.org/I4210142177"]}],"countries":["ES","SE"],"is_corresponding":false,"raw_author_name":"Marta E Alarc\u00f3n-Riquelme","raw_affiliation_strings":["GENYO. Centre for Genomics and Oncological Research: Pfizer, University of Granada, Andalusian Regional Government, PTS Granada , Avenida de la Ilustraci\u00f3n 114, 18016, Granada , Spain","Karolinska Institute , Department of Environmental Medicine, , 171 67, Solna , Sweden","Unit of Inflammatory Diseases , Department of Environmental Medicine, , 171 67, Solna , Sweden","Unit of Inflammatory Diseases, Department of Environmental Medicine, Karolinska Institute, 171 67, Solna, Sweden"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"GENYO. Centre for Genomics and Oncological Research: Pfizer, University of Granada, Andalusian Regional Government, PTS Granada , Avenida de la Ilustraci\u00f3n 114, 18016, Granada , Spain","institution_ids":["https://openalex.org/I173304897","https://openalex.org/I4210142177"]},{"raw_affiliation_string":"Karolinska Institute , Department of Environmental Medicine, , 171 67, Solna , Sweden","institution_ids":["https://openalex.org/I28166907"]},{"raw_affiliation_string":"Unit of Inflammatory Diseases , Department of Environmental Medicine, , 171 67, Solna , Sweden","institution_ids":[]},{"raw_affiliation_string":"Unit of Inflammatory Diseases, Department of Environmental Medicine, Karolinska Institute, 171 67, Solna, Sweden","institution_ids":["https://openalex.org/I28166907"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5085159862"],"corresponding_institution_ids":["https://openalex.org/I173304897","https://openalex.org/I4210142177"],"apc_list":{"value":4011,"currency":"USD","value_usd":4011},"apc_paid":{"value":4011,"currency":"USD","value_usd":4011},"fwci":null,"has_fulltext":true,"cited_by_count":0,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":"25","issue":"1","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10308","display_name":"Systemic Lupus Erythematosus Research","score":0.9980000257492065,"subfield":{"id":"https://openalex.org/subfields/2745","display_name":"Rheumatology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T10308","display_name":"Systemic Lupus Erythematosus Research","score":0.9980000257492065,"subfield":{"id":"https://openalex.org/subfields/2745","display_name":"Rheumatology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T11029","display_name":"Renal Diseases and Glomerulopathies","score":0.0006000000284984708,"subfield":{"id":"https://openalex.org/subfields/2727","display_name":"Nephrology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.0003000000142492354,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/lupus-nephritis","display_name":"lupus nephritis","score":0.9300000071525574},{"id":"https://openalex.org/keywords/systemic-lupus-erythematosus","display_name":"systemic lupus erythematosus","score":0.8029999732971191},{"id":"https://openalex.org/keywords/transcriptomics","display_name":"transcriptomics","score":0.8360000252723694},{"id":"https://openalex.org/keywords/gene-expression-profiling","display_name":"gene expression profiling","score":0.7289999723434448},{"id":"https://openalex.org/keywords/kidney-biopsy","display_name":"renal biopsy","score":0.5540000200271606},{"id":"https://openalex.org/keywords/clinical-decision-support","display_name":"clinical decision support","score":0.6600000262260437},{"id":"https://openalex.org/keywords/machine-learning-prediction","display_name":"machine learning prediction","score":0.5669999718666077},{"id":"https://openalex.org/keywords/personalized-medicine","display_name":"personalized medicine","score":0.6389999985694885},{"id":"https://openalex.org/keywords/autoimmunity","display_name":"autoimmunity","score":0.8309999704360962}],"concepts":[{"id":"https://openalex.org/C161191863","wikidata":"https://www.wikidata.org/wiki/Q199655","display_name":"Library science","level":1,"score":0.5491282939910889},{"id":"https://openalex.org/C15708023","wikidata":"https://www.wikidata.org/wiki/Q80083","display_name":"Humanities","level":1,"score":0.49448108673095703},{"id":"https://openalex.org/C2778137410","wikidata":"https://www.wikidata.org/wiki/Q2732820","display_name":"Government (linguistics)","level":2,"score":0.4739551544189453},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.3653952181339264},{"id":"https://openalex.org/C17744445","wikidata":"https://www.wikidata.org/wiki/Q36442","display_name":"Political science","level":0,"score":0.34493523836135864},{"id":"https://openalex.org/C142362112","wikidata":"https://www.wikidata.org/wiki/Q735","display_name":"Art","level":0,"score":0.2541481554508209},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.13967666029930115},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.10293164849281311},{"id":"https://openalex.org/C41895202","wikidata":"https://www.wikidata.org/wiki/Q8162","display_name":"Linguistics","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008181","descriptor_name":"Lupus Nephritis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":4,"locations":[{"id":"doi:10.1093/bib/bbad454","doi":"https://doi.org/10.1093/bib/bbad454","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbad454","pdf_url":"https://academic.oup.com/bib/article-pdf/25/1/bbad454/54256342/bbad454.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"listed_in":["ccf-b","cwts-core","doaj","dongbi-b","doyens","jufo-2","ki-jl-2","medline","norway-2","oarl","poland-140","russia-white-list-1"],"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},{"id":"pmh:oai:pubmedcentral.nih.gov:10753528","doi":null,"is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/10753528","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC10753528/pdf/bbad454.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Brief Bioinform","raw_type":"Text"},{"id":"pmid:38084921","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/38084921","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in bioinformatics","raw_type":"Letter"},{"id":"pmh:oai:digibug.ugr.es:10481/92676","doi":null,"is_oa":true,"landing_page_url":"https://hdl.handle.net/10481/92676","pdf_url":"https://digibug.ugr.es/bitstream/10481/92676/1/bbad454.pdf","source":{"id":"https://openalex.org/S4306400567","display_name":"Institutional Repository of the University of Granada (University of Granada)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I173304897","host_organization_name":"Universidad de Granada","host_organization_lineage":["https://openalex.org/I173304897"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"info:eu-repo/semantics/article"}],"best_oa_location":{"id":"doi:10.1093/bib/bbad454","doi":"https://doi.org/10.1093/bib/bbad454","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbad454","pdf_url":"https://academic.oup.com/bib/article-pdf/25/1/bbad454/54256342/bbad454.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"listed_in":["ccf-b","cwts-core","doaj","dongbi-b","doyens","jufo-2","ki-jl-2","medline","norway-2","oarl","poland-140","russia-white-list-1"],"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.9391000270843506,"display_name":"Good health and well-being","id":"https://metadata.un.org/sdg/3"}],"study_designs":[],"awards":[{"id":"https://openalex.org/G1175115578","display_name":null,"funder_award_id":"AEI//10.13039/501100011033/","funder_id":"https://openalex.org/F4320335598","funder_display_name":"Agencia Estatal de Investigaci\u00f3n"},{"id":"https://openalex.org/G1210977473","display_name":null,"funder_award_id":"MCIN/ AEI/10.13039/501100011033","funder_id":"https://openalex.org/F4320319605","funder_display_name":"Consejer\u00eda de Transformaci\u00f3n Econ\u00f3mica, Industria, Conocimiento y Universidades"},{"id":"https://openalex.org/G1341303","display_name":null,"funder_award_id":"MCIN/ AEI /10.13039/501100011033","funder_id":"https://openalex.org/F4320334923","funder_display_name":"Instituto de Salud Carlos III"},{"id":"https://openalex.org/G1953887145","display_name":null,"funder_award_id":"2014\u20102020","funder_id":"https://openalex.org/F4320320300","funder_display_name":"European Commission"},{"id":"https://openalex.org/G210041235","display_name":null,"funder_award_id":"MCIN /AEI/ 10.13039/501100011033","funder_id":"https://openalex.org/F4320320300","funder_display_name":"European Commission"},{"id":"https://openalex.org/G2262748287","display_name":null,"funder_award_id":"501100011033","funder_id":"https://openalex.org/F4320335598","funder_display_name":"Agencia Estatal de Investigaci\u00f3n"},{"id":"https://openalex.org/G2426432956","display_name":null,"funder_award_id":"20142020","funder_id":"https://openalex.org/F4320338080","funder_display_name":"European Social Fund"},{"id":"https://openalex.org/G2601397997","display_name":null,"funder_award_id":"10.13039/501100011033","funder_id":"https://openalex.org/F4320320300","funder_display_name":"European Commission"},{"id":"https://openalex.org/G2672435700","display_name":null,"funder_award_id":"/10.13039/501100011033","funder_id":"https://openalex.org/F4320334923","funder_display_name":"Instituto de Salud Carlos III"},{"id":"https://openalex.org/G2863668859","display_name":null,"funder_award_id":"MCIN / AEI / 10.13039/501100011033","funder_id":"https://openalex.org/F4320326754","funder_display_name":"Junta de Andaluc\u00eda"},{"id":"https://openalex.org/G300979063","display_name":null,"funder_award_id":"10.13039/501100011033","funder_id":"https://openalex.org/F4320335598","funder_display_name":"Agencia Estatal de Investigaci\u00f3n"},{"id":"https://openalex.org/G34346518","display_name":null,"funder_award_id":"MCIN/AEI/10.13039/501 100 011 033","funder_id":"https://openalex.org/F4320335598","funder_display_name":"Agencia Estatal de Investigaci\u00f3n"},{"id":"https://openalex.org/G3480869486","display_name":null,"funder_award_id":"13039","funder_id":"https://openalex.org/F4320335598","funder_display_name":"Agencia Estatal de Investigaci\u00f3n"},{"id":"https://openalex.org/G3681454997","display_name":null,"funder_award_id":"13039/501100011033","funder_id":"https://openalex.org/F4320320300","funder_display_name":"European Commission"},{"id":"https://openalex.org/G4042783231","display_name":null,"funder_award_id":"501100011033","funder_id":"https://openalex.org/F4320320300","funder_display_name":"European Commission"},{"id":"https://openalex.org/G425668148","display_name":null,"funder_award_id":".13039/501100011033","funder_id":"https://openalex.org/F4320335598","funder_display_name":"Agencia Estatal de Investigaci\u00f3n"},{"id":"https://openalex.org/G4316730327","display_name":"Identification of the Molecular Mechanisms of non-response to Treatments, Relapses and Remission in Autoimmune, Inflammatory, and Allergic Conditions","funder_award_id":"831434","funder_id":"https://openalex.org/F4320320300","funder_display_name":"European Commission"},{"id":"https://openalex.org/G434337789","display_name":null,"funder_award_id":"HORIZON2020","funder_id":"https://openalex.org/F4320320300","funder_display_name":"European Commission"},{"id":"https://openalex.org/G4668258890","display_name":null,"funder_award_id":"UGR20","funder_id":"https://openalex.org/F4320326754","funder_display_name":"Junta de Andaluc\u00eda"},{"id":"https://openalex.org/G5080475149","display_name":null,"funder_award_id":"10.13039","funder_id":"https://openalex.org/F4320335598","funder_display_name":"Agencia Estatal de Investigaci\u00f3n"},{"id":"https://openalex.org/G5195188938","display_name":null,"funder_award_id":"/AEI/10.13039/501100011033","funder_id":"https://openalex.org/F4320320300","funder_display_name":"European Commission"},{"id":"https://openalex.org/G546199279","display_name":null,"funder_award_id":"MCIN/AEI/10.13039/ 501100011033","funder_id":"https://openalex.org/F4320338080","funder_display_name":"European Social Fund"},{"id":"https://openalex.org/G6218905885","display_name":null,"funder_award_id":"501100011033","funder_id":"https://openalex.org/F4320338080","funder_display_name":"European Social Fund"},{"id":"https://openalex.org/G7084143925","display_name":null,"funder_award_id":"AEI/10","funder_id":"https://openalex.org/F4320335598","funder_display_name":"Agencia Estatal de Investigaci\u00f3n"},{"id":"https://openalex.org/G771919193","display_name":null,"funder_award_id":"UGR20","funder_id":"https://openalex.org/F4320320300","funder_display_name":"European Commission"},{"id":"https://openalex.org/G8696694383","display_name":null,"funder_award_id":"AEI/10.13039/501100011033","funder_id":"https://openalex.org/F4320334923","funder_display_name":"Instituto de Salud Carlos III"},{"id":"https://openalex.org/G8888022036","display_name":null,"funder_award_id":"AEI/10.13039/501100011033","funder_id":"https://openalex.org/F4320338080","funder_display_name":"European Social Fund"}],"funders":[{"id":"https://openalex.org/F4320314178","display_name":"European Federation of Pharmaceutical Industries and Associations","ror":"https://ror.org/00g1x4v36"},{"id":"https://openalex.org/F4320319605","display_name":"Consejer\u00eda de Transformaci\u00f3n Econ\u00f3mica, Industria, Conocimiento y Universidades","ror":null},{"id":"https://openalex.org/F4320320300","display_name":"European Commission","ror":"https://ror.org/00k4n6c32"},{"id":"https://openalex.org/F4320326754","display_name":"Junta de Andaluc\u00eda","ror":"https://ror.org/01jem9c82"},{"id":"https://openalex.org/F4320334923","display_name":"Instituto de Salud Carlos III","ror":"https://ror.org/00ca2c886"},{"id":"https://openalex.org/F4320335598","display_name":"Agencia Estatal de Investigaci\u00f3n","ror":"https://ror.org/003x0zc53"},{"id":"https://openalex.org/F4320338080","display_name":"European Social Fund","ror":"https://ror.org/00k4n6c32"},{"id":"https://openalex.org/F7296444849","display_name":"Ministerio de Universidades","ror":"https://ror.org/03zcny908"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4389628831.pdf","grobid_xml":"https://content.openalex.org/works/W4389628831.grobid-xml"},"referenced_works_count":4,"referenced_works":["https://openalex.org/W2118258530","https://openalex.org/W3017205702","https://openalex.org/W3173692280","https://openalex.org/W4292599015"],"related_works":["https://openalex.org/W4386466915","https://openalex.org/W4380184406","https://openalex.org/W4311092741","https://openalex.org/W2027320734","https://openalex.org/W2973460334","https://openalex.org/W4411424571","https://openalex.org/W4245902226","https://openalex.org/W7148632769","https://openalex.org/W4297199845","https://openalex.org/W2028664531"],"abstract_inverted_index":{"Recently,":[0],"a":[1,36,79,148,223,244,263,311,331],"letter":[2,207],"to":[3,25,43,70,103,119,129,151,173,187,192,198,253,330],"the":[4,8,32,47,56,63,74,90,105,113,133,153,170,175,211,234,259,281,301,323],"Editor":[5],"entitled":[6],"\u2018Testing":[7],"Effectiveness":[9],"of":[10,50,73,98,112,135,156,169,177,213,236,304,319,325],"MyPROSLE":[11,184],"in":[12,27,87,122,196,232,258,300,317],"Classifying":[13],"Patients":[14],"with":[15,58],"Lupus":[16],"Nephritis\u2019":[17],"has":[18],"been":[19],"submitted":[20],"by":[21,93],"Leventhal":[22,52,94],"et":[23,53,95],"al.":[24,54,96],"Briefings":[26],"Bioinformatics.":[28],"In":[29,82,143,181,280],"this":[30,83,123,178,182,189],"letter,":[31,84],"authors":[33,106],"test":[34],"MyPROSLE,":[35],"web":[37,114],"application":[38,57],"we":[39,85,100,117,125,146,298,309],"recently":[40],"introduced":[41],"[1],":[42],"characterizelupus":[44],"patients":[45],"from":[46],"molecular":[48,154],"point":[49],"view.":[51],"tested":[55],"independent":[59],"datasets":[60,195],"reporting":[61],"that":[62,121,265],"software":[64,131,249],"\u2018did":[65],"not":[66,127,251],"perform":[67],"sufficiently":[68],"well":[69],"consider":[71],"replacement":[72,134],"standard":[75,136],"kidney":[76],"biopsy":[77],"as":[78,140,222],"diagnostic":[80,138,256],"procedure\u2019.":[81],"address":[86],"detail":[88],"all":[89],"concerns":[91],"described":[92],"First":[97],"all,":[99],"would":[101],"like":[102],"thank":[104],"for":[107,132,226,270,288],"their":[108],"interest":[109],"and":[110,159,229,291,313],"evaluation":[111],"tool.":[115],"Nevertheless,":[116],"want":[118],"remark":[120],"work":[124],"did":[126],"intend":[128],"provide":[130,267],"clinical":[137,200,240,260,271,334],"procedures,":[139],"they":[141],"stated.":[142],"our":[144,248,305],"manuscript,":[145],"present":[147],"scoring":[149,179,190],"system":[150,191,264],"summarize":[152],"portrait":[155],"each":[157],"patient":[158],"machine":[160],"learning":[161],"models":[162,215],"based":[163,202],"on":[164,203,210],"these":[165,214,237],"features":[166,201],"are":[167],"one":[168],"analyses":[171],"used":[172,287],"demonstrate":[174],"utility":[176],"system.":[180],"context,":[183],"was":[185,250],"developed":[186],"apply":[188],"gene":[193],"expression":[194],"order":[197],"predict":[199],"transcriptomics":[204,218],"data.":[205],"The":[206],"is":[208,242,278,296],"focused":[209],"performance":[212],"but,":[216],"although":[217],"profiles":[219,238],"have":[220],"emerged":[221],"valuable":[224],"resource":[225],"making":[227],"new":[228],"significant":[230],"discoveries":[231],"diagnosis,":[233],"integration":[235],"into":[239],"practice":[241,335],"still":[243],"distant":[245],"goal.":[246],"Consequently,":[247],"designed":[252],"replace":[254],"existing":[255],"approaches":[257],"setting":[261],"but":[262],"can":[266],"additional":[268],"information":[269],"decisions":[272],"when":[273],"sufficient":[274],"quality":[275],"RNA-Seq":[276],"data":[277],"available.":[279],"current":[282],"scenario,":[283],"it":[284],"should":[285],"be":[286],"exploratory":[289],"analysis":[290],"hypothesis":[292],"generation.":[293],"This":[294],"concept":[295],"what":[297],"embodied":[299],"final":[302],"sentence":[303],"original":[306],"article:":[307],"\u2018Therefore,":[308],"set":[310],"precedent":[312],"an":[314,326],"important":[315],"advance":[316],"terms":[318],"personalized":[320],"research\u2019":[321],"(through":[322],"development":[324],"analytical":[327],"workflow)":[328],"\u2018oriented":[329],"near":[332],"future":[333],"within":[336],"autoimmunity\u2019.":[337]},"counts_by_year":[],"updated_date":"2026-11-06T12:05:46.655746","created_date":"2023-12-13T00:00:00"}