{"id":"https://openalex.org/W4388127013","doi":"https://doi.org/10.1101/2023.10.31.564964","title":"Chromosome-scale assembly of the African yam bean genome","display_name":"Chromosome-scale assembly of the African yam bean genome","publication_year":2023,"publication_date":"2023-11-01","ids":{"openalex":"https://openalex.org/W4388127013","doi":"https://doi.org/10.1101/2023.10.31.564964"},"language":"en","primary_location":{"id":"doi:10.1101/2023.10.31.564964","doi":"https://doi.org/10.1101/2023.10.31.564964","is_oa":true,"landing_page_url":"https://doi.org/10.1101/2023.10.31.564964","pdf_url":"https://www.biorxiv.org/content/biorxiv/early/2023/11/01/2023.10.31.564964.full.pdf","source":{"id":"https://openalex.org/S4306402567","display_name":"bioRxiv (Cold Spring Harbor Laboratory)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I2750212522","host_organization_name":"Cold Spring Harbor Laboratory","host_organization_lineage":["https://openalex.org/I2750212522"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"acceptedVersion","is_accepted":true,"is_published":false,"raw_source_name":"bioRxiv","raw_type":"posted-content"},"volume":null,"type":"preprint","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://www.biorxiv.org/content/biorxiv/early/2023/11/01/2023.10.31.564964.full.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5017819383","display_name":"Bernice Waweru","orcid":"https://orcid.org/0000-0002-1788-1567","observed_orcids":["https://orcid.org/0000-0002-1788-1567"]},"institutions":[{"id":"https://openalex.org/I100288624","display_name":"John Innes Centre","ror":"https://ror.org/055zmrh94","country_code":"GB","type":"facility","lineage":["https://openalex.org/I100288624","https://openalex.org/I2799693246","https://openalex.org/I4210087105"]},{"id":"https://openalex.org/I2799300731","display_name":"Norwich Research Park","ror":"https://ror.org/0062dz060","country_code":"GB","type":"archive","lineage":["https://openalex.org/I2799300731"]},{"id":"https://openalex.org/I58422712","display_name":"International Livestock Research Institute","ror":"https://ror.org/01jxjwb74","country_code":"KE","type":"facility","lineage":["https://openalex.org/I1286583668","https://openalex.org/I58422712"]}],"countries":["GB","KE"],"is_corresponding":false,"raw_author_name":"Bernice Waweru","raw_affiliation_strings":["International Livestock Research Institute, P.O. Box 30709, Nairobi 00100, Kenya","The John Innes Centre, Norwich Research Park, Norwich, NR4 7UH, UK","International Livestock Research Institute, P.O. Box 30709, Nairobi 0000, Kenya"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"International Livestock Research Institute, P.O. Box 30709, Nairobi 00100, Kenya","institution_ids":["https://openalex.org/I58422712"]},{"raw_affiliation_string":"The John Innes Centre, Norwich Research Park, Norwich, NR4 7UH, UK","institution_ids":["https://openalex.org/I100288624","https://openalex.org/I2799300731"]},{"raw_affiliation_string":"International Livestock Research Institute, P.O. Box 30709, Nairobi 0000, Kenya","institution_ids":["https://openalex.org/I58422712"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5052912260","display_name":"Isaac Njaci","orcid":"https://orcid.org/0000-0001-9649-6650","observed_orcids":["https://orcid.org/0000-0001-9649-6650"]},"institutions":[{"id":"https://openalex.org/I165143802","display_name":"The University of Queensland","ror":"https://ror.org/00rqy9422","country_code":"AU","type":"education","lineage":["https://openalex.org/I165143802"]},{"id":"https://openalex.org/I58422712","display_name":"International Livestock Research Institute","ror":"https://ror.org/01jxjwb74","country_code":"KE","type":"facility","lineage":["https://openalex.org/I1286583668","https://openalex.org/I58422712"]}],"countries":["AU","KE"],"is_corresponding":false,"raw_author_name":"Isaac Njaci","raw_affiliation_strings":["International Livestock Research Institute, P.O. Box 30709, Nairobi 00100, Kenya","School of Agriculture and Food Sustainability, The University of Queensland, Brisbane, QLD, Australia","International Livestock Research Institute, P.O. Box 30709, Nairobi 0000, Kenya"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"International Livestock Research Institute, P.O. Box 30709, Nairobi 00100, Kenya","institution_ids":["https://openalex.org/I58422712"]},{"raw_affiliation_string":"School of Agriculture and Food Sustainability, The University of Queensland, Brisbane, QLD, Australia","institution_ids":["https://openalex.org/I165143802"]},{"raw_affiliation_string":"International Livestock Research Institute, P.O. Box 30709, Nairobi 0000, Kenya","institution_ids":["https://openalex.org/I58422712"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5083695878","display_name":"Edwin Kimathi Murungi","orcid":"https://orcid.org/0000-0001-9896-0664","observed_orcids":["https://orcid.org/0000-0001-9896-0664"]},"institutions":[{"id":"https://openalex.org/I4210151796","display_name":"Kisii University","ror":"https://ror.org/053stv828","country_code":"KE","type":"education","lineage":["https://openalex.org/I4210151796"]}],"countries":["KE"],"is_corresponding":false,"raw_author_name":"Edwin Murungi","raw_affiliation_strings":["Department of Medical Biochemistry, Kisii University, P.O. Box 408-40200, Kisii, Kenya","Department of Medical Biochemistry, Kisii University, P.O. Box 08-0200, Kisii, Kenya"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Medical Biochemistry, Kisii University, P.O. Box 408-40200, Kisii, Kenya","institution_ids":["https://openalex.org/I4210151796"]},{"raw_affiliation_string":"Department of Medical Biochemistry, Kisii University, P.O. Box 08-0200, Kisii, Kenya","institution_ids":["https://openalex.org/I4210151796"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5068536652","display_name":"Rajneesh Paliwal","orcid":"https://orcid.org/0000-0001-6493-3289","observed_orcids":["https://orcid.org/0000-0001-6493-3289"]},"institutions":[{"id":"https://openalex.org/I4210122440","display_name":"International Institute of Tropical Agriculture","ror":"https://ror.org/02smred28","country_code":"NG","type":"nonprofit","lineage":["https://openalex.org/I4210122440"]},{"id":"https://openalex.org/I64180646","display_name":"International Institute of Tropical Agriculture","ror":"https://ror.org/00va88c89","country_code":"NG","type":"nonprofit","lineage":["https://openalex.org/I1286583668","https://openalex.org/I64180646"]}],"countries":["NG"],"is_corresponding":false,"raw_author_name":"Rajneesh Paliwal","raw_affiliation_strings":["Genetic Resources Center, International Institute of Tropical Agriculture, Oyo Road, Ibadan 200001, Nigeria"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Genetic Resources Center, International Institute of Tropical Agriculture, Oyo Road, Ibadan 200001, Nigeria","institution_ids":["https://openalex.org/I4210122440","https://openalex.org/I64180646"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5054526196","display_name":"Collins Muli","orcid":"https://orcid.org/0000-0003-1775-0468","observed_orcids":["https://orcid.org/0000-0003-1775-0468"]},"institutions":[{"id":"https://openalex.org/I58422712","display_name":"International Livestock Research Institute","ror":"https://ror.org/01jxjwb74","country_code":"KE","type":"facility","lineage":["https://openalex.org/I1286583668","https://openalex.org/I58422712"]}],"countries":["KE"],"is_corresponding":false,"raw_author_name":"Collins Mulli","raw_affiliation_strings":["International Livestock Research Institute, P.O. Box 30709, Nairobi 00100, Kenya","International Livestock Research Institute, P.O. Box 30709, Nairobi 0000, Kenya"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"International Livestock Research Institute, P.O. Box 30709, Nairobi 00100, Kenya","institution_ids":["https://openalex.org/I58422712"]},{"raw_affiliation_string":"International Livestock Research Institute, P.O. Box 30709, Nairobi 0000, Kenya","institution_ids":["https://openalex.org/I58422712"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5045655432","display_name":"Mary Maranga","orcid":"https://orcid.org/0000-0003-3496-8776","observed_orcids":["https://orcid.org/0000-0003-3496-8776"]},"institutions":[{"id":"https://openalex.org/I126596746","display_name":"Jagiellonian University","ror":"https://ror.org/03bqmcz70","country_code":"PL","type":"education","lineage":["https://openalex.org/I126596746"]},{"id":"https://openalex.org/I26805570","display_name":"Jomo Kenyatta University of Agriculture and Technology","ror":"https://ror.org/015h5sy57","country_code":"KE","type":"education","lineage":["https://openalex.org/I26805570"]}],"countries":["KE","PL"],"is_corresponding":false,"raw_author_name":"Mary Maranga","raw_affiliation_strings":["Department of Biochemistry, Jomo Kenyatta University of Agriculture and Technology, P.O. Box 62000, Nairobi 00200, Kenya","Malopolska Centre of Biotechnology, Jagiellonian University, Krakow, Poland","Department of Biochemistry, Jomo Kenyatta University of Agriculture and Technology, P.O. Box 2000, Nairobi 00200, Kenya"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biochemistry, Jomo Kenyatta University of Agriculture and Technology, P.O. Box 62000, Nairobi 00200, Kenya","institution_ids":["https://openalex.org/I26805570"]},{"raw_affiliation_string":"Malopolska Centre of Biotechnology, Jagiellonian University, Krakow, Poland","institution_ids":["https://openalex.org/I126596746"]},{"raw_affiliation_string":"Department of Biochemistry, Jomo Kenyatta University of Agriculture and Technology, P.O. Box 2000, Nairobi 00200, Kenya","institution_ids":["https://openalex.org/I26805570"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5055436881","display_name":"Davies Kiambi Kaimenyi","orcid":"https://orcid.org/0000-0002-6320-3740","observed_orcids":["https://orcid.org/0000-0002-6320-3740"]},"institutions":[{"id":"https://openalex.org/I279922783","display_name":"Pwani University","ror":"https://ror.org/02952pd71","country_code":"KE","type":"education","lineage":["https://openalex.org/I279922783"]},{"id":"https://openalex.org/I4210165358","display_name":"Hochschule Geisenheim University","ror":"https://ror.org/05myv7q56","country_code":"DE","type":"education","lineage":["https://openalex.org/I4210165358"]}],"countries":["DE","KE"],"is_corresponding":false,"raw_author_name":"Davies Kaimenyi","raw_affiliation_strings":["Bioscience Research Centre (PUBReC), Pwani University, P.O Box 195-80108, Kilifi, Kenya","Institut f\u00fcr Mikrobiologie und Biochemie, Hochschule Geisenheim University, Von-Lade-Str. 1, 65366 Geisenheim, Germany","Bioscience Research Centre (PUBReC), Pwani University, P.O Box 195-010, Kilifi, Kenya"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Bioscience Research Centre (PUBReC), Pwani University, P.O Box 195-80108, Kilifi, Kenya","institution_ids":["https://openalex.org/I279922783"]},{"raw_affiliation_string":"Institut f\u00fcr Mikrobiologie und Biochemie, Hochschule Geisenheim University, Von-Lade-Str. 1, 65366 Geisenheim, Germany","institution_ids":["https://openalex.org/I4210165358"]},{"raw_affiliation_string":"Bioscience Research Centre (PUBReC), Pwani University, P.O Box 195-010, Kilifi, Kenya","institution_ids":["https://openalex.org/I279922783"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5033330696","display_name":"Beatus Modest Lyimo","orcid":"https://orcid.org/0000-0002-6743-4546","observed_orcids":["https://orcid.org/0000-0002-6743-4546","https://orcid.org/0000-0002-2467-3352"]},"institutions":[{"id":"https://openalex.org/I97231232","display_name":"Nelson Mandela African Institution of Science and Technology","ror":"https://ror.org/041vsn055","country_code":"TZ","type":"education","lineage":["https://openalex.org/I97231232"]}],"countries":["TZ"],"is_corresponding":false,"raw_author_name":"Beatus Lyimo","raw_affiliation_strings":["Nelson Mandela African Institute of Science and Technology, Arusha, Tanzania"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Nelson Mandela African Institute of Science and Technology, Arusha, Tanzania","institution_ids":["https://openalex.org/I97231232"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5021625049","display_name":"Helen Nigussie","orcid":"https://orcid.org/0000-0001-8261-1718","observed_orcids":["https://orcid.org/0000-0001-8261-1718"]},"institutions":[{"id":"https://openalex.org/I4537092","display_name":"Addis Ababa University","ror":"https://ror.org/038b8e254","country_code":"ET","type":"education","lineage":["https://openalex.org/I4537092"]}],"countries":["ET"],"is_corresponding":false,"raw_author_name":"Helen Nigussie","raw_affiliation_strings":["Department of Microbial Cellular and Molecular Biology, Addis Ababa University, Ethiopia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Microbial Cellular and Molecular Biology, Addis Ababa University, Ethiopia","institution_ids":["https://openalex.org/I4537092"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Bwihangane Birindwa Ahadi","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I4210122770","display_name":"Universit\u00e9 Officielle de Bukavu","ror":"https://ror.org/02pad2v09","country_code":"CD","type":"education","lineage":["https://openalex.org/I4210122770"]},{"id":"https://openalex.org/I4210125530","display_name":"Universit\u00e9 Evang\u00e9lique en Afrique","ror":"https://ror.org/0306pcd50","country_code":"CD","type":"education","lineage":["https://openalex.org/I4210125530"]}],"countries":["CD"],"is_corresponding":false,"raw_author_name":"Bwihangane Birindwa Ahadi","raw_affiliation_strings":["Universit\u00e9 Evang\u00e9lique en Afrique, UEA, Faculty of Agriculture and Environment sciences, Bukavu, Democratic Republic of the Congo","Universit\u00e9 Officielle de Bukavu, UOB, Faculty of Sciences, Bukavu, Democratic Republic of the Congo"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Universit\u00e9 Evang\u00e9lique en Afrique, UEA, Faculty of Agriculture and Environment sciences, Bukavu, Democratic Republic of the Congo","institution_ids":["https://openalex.org/I4210125530"]},{"raw_affiliation_string":"Universit\u00e9 Officielle de Bukavu, UOB, Faculty of Sciences, Bukavu, Democratic Republic of the Congo","institution_ids":["https://openalex.org/I4210122770"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5008716454","display_name":"Ermias Assefa","orcid":"https://orcid.org/0000-0002-1207-2971","observed_orcids":["https://orcid.org/0000-0002-1207-2971","https://orcid.org/0000-0002-2258-7645"]},"institutions":[{"id":"https://openalex.org/I4405262659","display_name":"Bio and Emerging Technology Institute","ror":"https://ror.org/04h4zn851","country_code":"ET","type":"facility","lineage":["https://openalex.org/I4405262659"]}],"countries":["ET"],"is_corresponding":false,"raw_author_name":"Ermias Assefa","raw_affiliation_strings":["Genomics and Bioinformatics Research Directorate, Bio and Emerging Technology Institute, Addis Ababa, Ethiopia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Genomics and Bioinformatics Research Directorate, Bio and Emerging Technology Institute, Addis Ababa, Ethiopia","institution_ids":["https://openalex.org/I4405262659"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5089160098","display_name":"Hassan Zackaria Ali Ishag","orcid":"https://orcid.org/0000-0003-4723-1909","observed_orcids":["https://orcid.org/0000-0003-4723-1909"]},"institutions":[{"id":"https://openalex.org/I4210134437","display_name":"University of Nyala","ror":"https://ror.org/03275xe23","country_code":"SD","type":"education","lineage":["https://openalex.org/I4210134437"]}],"countries":["SD"],"is_corresponding":false,"raw_author_name":"Hassan Ishag","raw_affiliation_strings":["College of Veterinary Sciences, University of Nyala, Nyala, Sudan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Veterinary Sciences, University of Nyala, Nyala, Sudan","institution_ids":["https://openalex.org/I4210134437"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5010851690","display_name":"Oluwaseyi E. Olomitutu","orcid":"https://orcid.org/0000-0002-3628-7707","observed_orcids":["https://orcid.org/0000-0002-3628-7707"]},"institutions":[{"id":"https://openalex.org/I165143802","display_name":"The University of Queensland","ror":"https://ror.org/00rqy9422","country_code":"AU","type":"education","lineage":["https://openalex.org/I165143802"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Oluwaseyi Olomitutu","raw_affiliation_strings":["School of Agriculture and Food Sustainability, The University of Queensland, Brisbane, QLD, Australia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Agriculture and Food Sustainability, The University of Queensland, Brisbane, QLD, Australia","institution_ids":["https://openalex.org/I165143802"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5007945722","display_name":"Michael Terrance Abberton","orcid":"https://orcid.org/0000-0003-2555-9591","observed_orcids":["https://orcid.org/0000-0003-2555-9591"]},"institutions":[{"id":"https://openalex.org/I165143802","display_name":"The University of Queensland","ror":"https://ror.org/00rqy9422","country_code":"AU","type":"education","lineage":["https://openalex.org/I165143802"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Michael Abberton","raw_affiliation_strings":["School of Agriculture and Food Sustainability, The University of Queensland, Brisbane, QLD, Australia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Agriculture and Food Sustainability, The University of Queensland, Brisbane, QLD, Australia","institution_ids":["https://openalex.org/I165143802"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Christopher Darby","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I100288624","display_name":"John Innes Centre","ror":"https://ror.org/055zmrh94","country_code":"GB","type":"facility","lineage":["https://openalex.org/I100288624","https://openalex.org/I2799693246","https://openalex.org/I4210087105"]},{"id":"https://openalex.org/I2799300731","display_name":"Norwich Research Park","ror":"https://ror.org/0062dz060","country_code":"GB","type":"archive","lineage":["https://openalex.org/I2799300731"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Christopher Darby","raw_affiliation_strings":["The John Innes Centre, Norwich Research Park, Norwich, NR4 7UH, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"The John Innes Centre, Norwich Research Park, Norwich, NR4 7UH, UK","institution_ids":["https://openalex.org/I100288624","https://openalex.org/I2799300731"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5063383525","display_name":"Crist\u00f3bal Uauy","orcid":"https://orcid.org/0000-0002-9814-1770","observed_orcids":["https://orcid.org/0000-0002-9814-1770"]},"institutions":[{"id":"https://openalex.org/I100288624","display_name":"John Innes Centre","ror":"https://ror.org/055zmrh94","country_code":"GB","type":"facility","lineage":["https://openalex.org/I100288624","https://openalex.org/I2799693246","https://openalex.org/I4210087105"]},{"id":"https://openalex.org/I2799300731","display_name":"Norwich Research Park","ror":"https://ror.org/0062dz060","country_code":"GB","type":"archive","lineage":["https://openalex.org/I2799300731"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Cristobal Uauy","raw_affiliation_strings":["The John Innes Centre, Norwich Research Park, Norwich, NR4 7UH, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"The John Innes Centre, Norwich Research Park, Norwich, NR4 7UH, UK","institution_ids":["https://openalex.org/I100288624","https://openalex.org/I2799300731"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5029755613","display_name":"Nasser Kouadio Yao","orcid":"https://orcid.org/0000-0002-1183-708X","observed_orcids":["https://orcid.org/0000-0002-1183-708X"]},"institutions":[{"id":"https://openalex.org/I58422712","display_name":"International Livestock Research Institute","ror":"https://ror.org/01jxjwb74","country_code":"KE","type":"facility","lineage":["https://openalex.org/I1286583668","https://openalex.org/I58422712"]}],"countries":["KE"],"is_corresponding":false,"raw_author_name":"Nasser Yao","raw_affiliation_strings":["International Livestock Research Institute, P.O. Box 30709, Nairobi 00100, Kenya","International Livestock Research Institute, P.O. Box 30709, Nairobi 0000, Kenya"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"International Livestock Research Institute, P.O. Box 30709, Nairobi 00100, Kenya","institution_ids":["https://openalex.org/I58422712"]},{"raw_affiliation_string":"International Livestock Research Institute, P.O. Box 30709, Nairobi 0000, Kenya","institution_ids":["https://openalex.org/I58422712"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5045313939","display_name":"Daniel Babasola ADEWALE","orcid":"https://orcid.org/0000-0002-0249-8629","observed_orcids":["https://orcid.org/0000-0002-0249-8629"]},"institutions":[{"id":"https://openalex.org/I43427933","display_name":"Federal University Oye Ekiti","ror":"https://ror.org/02q5h6807","country_code":"NG","type":"education","lineage":["https://openalex.org/I43427933"]}],"countries":["NG"],"is_corresponding":true,"raw_author_name":"Daniel Adewale","raw_affiliation_strings":["Department of Crop Science and Horticulture, Federal University Oye-Ekiti, Ikole-Ekiti Campus, Nigeria"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Crop Science and Horticulture, Federal University Oye-Ekiti, Ikole-Ekiti Campus, Nigeria","institution_ids":["https://openalex.org/I43427933"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5042060368","display_name":"Peter M. F. Emmrich","orcid":"https://orcid.org/0000-0001-5085-9575","observed_orcids":["https://orcid.org/0000-0001-5085-9575"]},"institutions":[{"id":"https://openalex.org/I100288624","display_name":"John Innes Centre","ror":"https://ror.org/055zmrh94","country_code":"GB","type":"facility","lineage":["https://openalex.org/I100288624","https://openalex.org/I2799693246","https://openalex.org/I4210087105"]},{"id":"https://openalex.org/I2799300731","display_name":"Norwich Research Park","ror":"https://ror.org/0062dz060","country_code":"GB","type":"archive","lineage":["https://openalex.org/I2799300731"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Peter Emmrich","raw_affiliation_strings":["The John Innes Centre, Norwich Research Park, Norwich, NR4 7UH, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"The John Innes Centre, Norwich Research Park, Norwich, NR4 7UH, UK","institution_ids":["https://openalex.org/I100288624","https://openalex.org/I2799300731"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5012649088","display_name":"Jean-Baka Domelevo Entfellner","orcid":"https://orcid.org/0000-0002-8282-1325","observed_orcids":["https://orcid.org/0000-0002-8282-1325"]},"institutions":[{"id":"https://openalex.org/I58422712","display_name":"International Livestock Research Institute","ror":"https://ror.org/01jxjwb74","country_code":"KE","type":"facility","lineage":["https://openalex.org/I1286583668","https://openalex.org/I58422712"]}],"countries":["KE"],"is_corresponding":true,"raw_author_name":"Jean-Baka Domelevo Entfellner","raw_affiliation_strings":["International Livestock Research Institute, P.O. Box 30709, Nairobi 00100, Kenya","International Livestock Research Institute, P.O. Box 30709, Nairobi 0000, Kenya"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"International Livestock Research Institute, P.O. Box 30709, Nairobi 00100, Kenya","institution_ids":["https://openalex.org/I58422712"]},{"raw_affiliation_string":"International Livestock Research Institute, P.O. Box 30709, Nairobi 0000, Kenya","institution_ids":["https://openalex.org/I58422712"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5011887106","display_name":"Oluwaseyi Shorinola","orcid":"https://orcid.org/0000-0003-3516-303X","observed_orcids":["https://orcid.org/0000-0003-3516-303X"]},"institutions":[{"id":"https://openalex.org/I100288624","display_name":"John Innes Centre","ror":"https://ror.org/055zmrh94","country_code":"GB","type":"facility","lineage":["https://openalex.org/I100288624","https://openalex.org/I2799693246","https://openalex.org/I4210087105"]},{"id":"https://openalex.org/I2799300731","display_name":"Norwich Research Park","ror":"https://ror.org/0062dz060","country_code":"GB","type":"archive","lineage":["https://openalex.org/I2799300731"]},{"id":"https://openalex.org/I58422712","display_name":"International Livestock Research Institute","ror":"https://ror.org/01jxjwb74","country_code":"KE","type":"facility","lineage":["https://openalex.org/I1286583668","https://openalex.org/I58422712"]},{"id":"https://openalex.org/I79619799","display_name":"University of Birmingham","ror":"https://ror.org/03angcq70","country_code":"GB","type":"education","lineage":["https://openalex.org/I79619799"]}],"countries":["GB","KE"],"is_corresponding":true,"raw_author_name":"Oluwaseyi Shorinola","raw_affiliation_strings":["International Livestock Research Institute, P.O. Box 30709, Nairobi 00100, Kenya","School of Bioscience, University of Birmingham, Edgbaston, Birmingham, B15 2TT, UK","The John Innes Centre, Norwich Research Park, Norwich, NR4 7UH, UK","International Livestock Research Institute, P.O. Box 30709, Nairobi 0000, Kenya"],"raw_orcid":"https://orcid.org/0000-0003-3516-303X","affiliations":[{"raw_affiliation_string":"International Livestock Research Institute, P.O. Box 30709, Nairobi 00100, Kenya","institution_ids":["https://openalex.org/I58422712"]},{"raw_affiliation_string":"School of Bioscience, University of Birmingham, Edgbaston, Birmingham, B15 2TT, UK","institution_ids":["https://openalex.org/I79619799"]},{"raw_affiliation_string":"The John Innes Centre, Norwich Research Park, Norwich, NR4 7UH, UK","institution_ids":["https://openalex.org/I100288624","https://openalex.org/I2799300731"]},{"raw_affiliation_string":"International Livestock Research Institute, P.O. Box 30709, Nairobi 0000, Kenya","institution_ids":["https://openalex.org/I58422712"]}]}],"institutions":[],"countries_distinct_count":10,"institutions_distinct_count":19,"corresponding_author_ids":["https://openalex.org/A5011887106","https://openalex.org/A5012649088","https://openalex.org/A5045313939"],"corresponding_institution_ids":["https://openalex.org/I100288624","https://openalex.org/I2799300731","https://openalex.org/I43427933","https://openalex.org/I58422712","https://openalex.org/I79619799"],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":true,"cited_by_count":2,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12115","display_name":"Genetic and Environmental Crop Studies","score":0.8130000233650208,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12115","display_name":"Genetic and Environmental Crop Studies","score":0.8130000233650208,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.10159999877214432,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T13125","display_name":"Agricultural pest management studies","score":0.026900000870227814,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/african-yam-bean","display_name":"African yam bean","score":0.9769999980926514},{"id":"https://openalex.org/keywords/sphenostylis-stenocarpa","display_name":"Sphenostylis stenocarpa","score":1.0},{"id":"https://openalex.org/keywords/chromosome-level-genome-assembly","display_name":"chromosome-level genome assembly","score":0.9549999833106995},{"id":"https://openalex.org/keywords/underutilized-crops","display_name":"underutilized crops","score":0.6420000195503235},{"id":"https://openalex.org/keywords/genome-annotation","display_name":"genome annotation","score":0.5910000205039978},{"id":"https://openalex.org/keywords/genome-wide-association-study","display_name":"genome-wide association study","score":0.42399999499320984},{"id":"https://openalex.org/keywords/candidate-gene-studies","display_name":"candidate gene association","score":0.7120000123977661},{"id":"https://openalex.org/keywords/food-and-nutrition-security","display_name":"food and nutrition security","score":0.5950000286102295}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.7242263555526733},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.6637316942214966},{"id":"https://openalex.org/C18949551","wikidata":"https://www.wikidata.org/wiki/Q740578","display_name":"Sequence assembly","level":5,"score":0.6293582320213318},{"id":"https://openalex.org/C189206191","wikidata":"https://www.wikidata.org/wiki/Q222046","display_name":"Genomics","level":4,"score":0.5181302428245544},{"id":"https://openalex.org/C61271108","wikidata":"https://www.wikidata.org/wiki/Q3180866","display_name":"Genome size","level":4,"score":0.5178568363189697},{"id":"https://openalex.org/C24432333","wikidata":"https://www.wikidata.org/wiki/Q2068526","display_name":"Whole genome sequencing","level":4,"score":0.48393017053604126},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.46742576360702515},{"id":"https://openalex.org/C150903083","wikidata":"https://www.wikidata.org/wiki/Q7108","display_name":"Biotechnology","level":1,"score":0.44099393486976624},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.4350476861000061},{"id":"https://openalex.org/C78458016","wikidata":"https://www.wikidata.org/wiki/Q840400","display_name":"Evolutionary biology","level":1,"score":0.35457929968833923},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.33428314328193665},{"id":"https://openalex.org/C162317418","wikidata":"https://www.wikidata.org/wiki/Q252857","display_name":"Transcriptome","level":4,"score":0.2237395942211151},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1101/2023.10.31.564964","doi":"https://doi.org/10.1101/2023.10.31.564964","is_oa":true,"landing_page_url":"https://doi.org/10.1101/2023.10.31.564964","pdf_url":"https://www.biorxiv.org/content/biorxiv/early/2023/11/01/2023.10.31.564964.full.pdf","source":{"id":"https://openalex.org/S4306402567","display_name":"bioRxiv (Cold Spring Harbor Laboratory)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I2750212522","host_organization_name":"Cold Spring Harbor Laboratory","host_organization_lineage":["https://openalex.org/I2750212522"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"acceptedVersion","is_accepted":true,"is_published":false,"raw_source_name":"bioRxiv","raw_type":"posted-content"},{"id":"pmh:oai:cgspace.cgiar.org:10568/168900","doi":null,"is_oa":true,"landing_page_url":"https://hdl.handle.net/10568/168900","pdf_url":null,"source":{"id":"https://openalex.org/S4306402055","display_name":"CGSPace A Repository of Agricultural Research Outputs (Consultative Group for International Agricultural Research)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1286583668","host_organization_name":"CGIAR","host_organization_lineage":["https://openalex.org/I1286583668"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Waweru, B., Njaci, I., Paliwal, R., Maranga, M., Muli, C., Murungi, E., Kaimenyi, D., Lyimo, B., Nigussie, H., Ahadi, B.B., Assefa, E., Ishag, H., Olomitutu, O., Abberton, M., Darby, C., Uauy, C., Yao, N., Adewale, D., Emmrich, P., Domelevo Entfellner, J.-B. and Shorinola, O. 2024. Chromosome-scale assembly of the African yam bean genome. Scientific Data 11: 1384.","raw_type":"Journal Article"}],"best_oa_location":{"id":"doi:10.1101/2023.10.31.564964","doi":"https://doi.org/10.1101/2023.10.31.564964","is_oa":true,"landing_page_url":"https://doi.org/10.1101/2023.10.31.564964","pdf_url":"https://www.biorxiv.org/content/biorxiv/early/2023/11/01/2023.10.31.564964.full.pdf","source":{"id":"https://openalex.org/S4306402567","display_name":"bioRxiv (Cold Spring Harbor Laboratory)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I2750212522","host_organization_name":"Cold Spring Harbor Laboratory","host_organization_lineage":["https://openalex.org/I2750212522"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"acceptedVersion","is_accepted":true,"is_published":false,"raw_source_name":"bioRxiv","raw_type":"posted-content"},"sustainable_development_goals":[{"display_name":"Zero hunger","score":0.991100013256073,"id":"https://metadata.un.org/sdg/2"}],"sustainable_development_goals_aurora":[{"display_name":"Zero hunger","score":0.5699999928474426,"id":"https://metadata.un.org/sdg/2"}],"study_designs":[],"awards":[{"id":"https://openalex.org/G2058729587","display_name":null,"funder_award_id":"BBS/E/JI/230003D","funder_id":"https://openalex.org/F4320334629","funder_display_name":"Biotechnology and Biological Sciences Research Council"},{"id":"https://openalex.org/G3292496694","display_name":"Building capacity in third-generation genomics and bioinformatics for agricultural biosciences in Africa","funder_award_id":"BB/T017422/1","funder_id":"https://openalex.org/F4320334629","funder_display_name":"Biotechnology and Biological Sciences Research Council"},{"id":"https://openalex.org/G3743168345","display_name":"ABCF Bioinformatics Community of Practice (BiX COP)","funder_award_id":"BB/R020272/1","funder_id":"https://openalex.org/F4320334629","funder_display_name":"Biotechnology and Biological Sciences Research Council"},{"id":"https://openalex.org/G6209149755","display_name":null,"funder_award_id":"BBS/E/JI/230002A","funder_id":"https://openalex.org/F4320334629","funder_display_name":"Biotechnology and Biological Sciences Research Council"},{"id":"https://openalex.org/G751507354","display_name":null,"funder_award_id":"BBS/E/JI/230003A","funder_id":"https://openalex.org/F4320334629","funder_display_name":"Biotechnology and Biological Sciences Research Council"}],"funders":[{"id":"https://openalex.org/F4320306867","display_name":"American Breast Cancer Foundation","ror":"https://ror.org/03p9d3z47"},{"id":"https://openalex.org/F4320332167","display_name":"Directorate for Biological Sciences","ror":"https://ror.org/001xhss06"},{"id":"https://openalex.org/F4320334629","display_name":"Biotechnology and Biological Sciences Research Council","ror":"https://ror.org/00cwqg982"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4388127013.pdf","grobid_xml":"https://content.openalex.org/works/W4388127013.grobid-xml"},"referenced_works_count":62,"referenced_works":["https://openalex.org/W300151002","https://openalex.org/W1980340421","https://openalex.org/W1992613178","https://openalex.org/W2020134788","https://openalex.org/W2021044098","https://openalex.org/W2031735290","https://openalex.org/W2034149729","https://openalex.org/W2034221042","https://openalex.org/W2042770634","https://openalex.org/W2053144295","https://openalex.org/W2057197272","https://openalex.org/W2073528784","https://openalex.org/W2101291993","https://openalex.org/W2107772251","https://openalex.org/W2108108770","https://openalex.org/W2108234281","https://openalex.org/W2110035718","https://openalex.org/W2111281047","https://openalex.org/W2118970626","https://openalex.org/W2121840477","https://openalex.org/W2132378736","https://openalex.org/W2136075506","https://openalex.org/W2141165178","https://openalex.org/W2154952425","https://openalex.org/W2155628349","https://openalex.org/W2158804744","https://openalex.org/W2159038577","https://openalex.org/W2161745371","https://openalex.org/W2178775340","https://openalex.org/W2324368490","https://openalex.org/W2493763501","https://openalex.org/W2758727546","https://openalex.org/W2772231999","https://openalex.org/W2777144464","https://openalex.org/W2788228074","https://openalex.org/W2789843538","https://openalex.org/W2898402099","https://openalex.org/W2915869563","https://openalex.org/W2917498696","https://openalex.org/W2931214767","https://openalex.org/W2941017110","https://openalex.org/W2941342985","https://openalex.org/W2950993016","https://openalex.org/W2967528950","https://openalex.org/W2973351229","https://openalex.org/W2995527562","https://openalex.org/W2995983083","https://openalex.org/W3010916080","https://openalex.org/W3017049640","https://openalex.org/W3049145779","https://openalex.org/W3102501823","https://openalex.org/W3113648239","https://openalex.org/W3130614073","https://openalex.org/W3136918052","https://openalex.org/W3203343200","https://openalex.org/W4200135473","https://openalex.org/W4247053599","https://openalex.org/W4289205454","https://openalex.org/W4311495043","https://openalex.org/W4311849860","https://openalex.org/W4317556591","https://openalex.org/W4366163166"],"related_works":["https://openalex.org/W2163302769","https://openalex.org/W2380089835","https://openalex.org/W4391507960","https://openalex.org/W1973073311","https://openalex.org/W2613624654","https://openalex.org/W2277864219","https://openalex.org/W3196805860","https://openalex.org/W3128719396","https://openalex.org/W3042883531","https://openalex.org/W2985720674"],"abstract_inverted_index":{"Abstract":[0],"Genomics-informed":[1],"breeding":[2],"of":[3,25,30,51,62,65,100,112,148],"locally":[4],"adapted,":[5],"nutritious,":[6],"albeit":[7],"underutilised":[8],"African":[9,43,66],"crops":[10,45],"can":[11],"help":[12],"mitigate":[13],"food":[14],"and":[15,38,53,85,103,127,153],"nutrition":[16],"insecurity":[17],"challenges":[18],"in":[19,107,157,171],"Africa,":[20],"particularly":[21],"against":[22],"the":[23,49,60,63,113],"backdrop":[24],"climate":[26],"change.":[27],"However,":[28],"utilisation":[29],"modern":[31],"crop":[32,76],"improvement":[33],"tools":[34],"including":[35],"genomic":[36,54],"selection":[37],"genome":[39,64,115,162],"editing":[40],"for":[41,168],"many":[42],"indigenous":[44,79],"is":[46,78],"hampered":[47],"by":[48],"scarcity":[50],"genetic":[52,169],"resources.":[55],"Here":[56],"we":[57,92,133],"report":[58],"on":[59,118],"assembly":[61,96,163],"yam":[67,159,173],"bean":[68],"(":[69],"Sphenostylis":[70],"stenocarpa)":[71],",":[72],"a":[73,94,165],"tuberous":[74],"legume":[75],"that":[77],"to":[80],"Africa.":[81],"By":[82],"combining":[83],"long":[84],"short":[86],"read":[87],"sequencing":[88],"with":[89,97],"Hi-C":[90],"scaffolding,":[91],"produced":[93],"chromosome-scale":[95],"an":[98],"N50":[99],"69.5":[101],"Mbp":[102,106],"totalling":[104],"649":[105],"length":[108],"(77":[109],"-":[110],"81%":[111],"estimated":[114],"size":[116],"based":[117],"flow":[119],"cytometry).":[120],"Using":[121],"transcriptome":[122],"evidence":[123,129],"from":[124,130],"Nanopore":[125],"RNA-Seq":[126],"homology":[128],"related":[131],"crops,":[132],"annotated":[134],"31,614":[135],"putative":[136],"protein":[137],"coding":[138],"genes.":[139],"We":[140],"further":[141],"show":[142],"how":[143],"this":[144],"resource":[145,167],"improves":[146],"anchoring":[147],"markers,":[149],"genome-wide":[150],"association":[151],"analysis":[152],"candidate":[154],"gene":[155],"analyses":[156],"Africa":[158,172],"bean.":[160,174],"This":[161],"provides":[164],"valuable":[166],"research":[170]},"counts_by_year":[{"year":2025,"cited_by_count":2}],"updated_date":"2026-10-16T09:59:22.235173","created_date":"2025-10-10T00:00:00"}
