{"id":"https://openalex.org/W4388002556","doi":"https://doi.org/10.1016/j.scitotenv.2023.168166","title":"Emergence of Elizabethkingia miricola in the Brazilian Amazon region","display_name":"Emergence of Elizabethkingia miricola in the Brazilian Amazon region","publication_year":2023,"publication_date":"2023-10-27","ids":{"openalex":"https://openalex.org/W4388002556","doi":"https://doi.org/10.1016/j.scitotenv.2023.168166","pmid":"https://pubmed.ncbi.nlm.nih.gov/39491192"},"language":"en","primary_location":{"id":"doi:10.1016/j.scitotenv.2023.168166","doi":"https://doi.org/10.1016/j.scitotenv.2023.168166","is_oa":false,"landing_page_url":"https://doi.org/10.1016/j.scitotenv.2023.168166","pdf_url":null,"source":{"id":"https://openalex.org/S86852077","display_name":"The Science of The Total Environment","issn_l":"0048-9697","issn":["0048-9697","1879-1026"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["anvur-class-a","anvur-scientific","cwts-core","jufo-2","medline","norway-2","poland-200","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Science of The Total Environment","raw_type":"journal-article"},"volume":null,"type":"article","is_traditional":true,"indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://doi.org/10.2139/ssrn.4524651","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5102844322","display_name":"\u00c9rica Louren\u00e7o da Fonseca","orcid":"https://orcid.org/0000-0002-5029-7389","observed_orcids":["https://orcid.org/0000-0002-5029-7389"]},"institutions":[{"id":"https://openalex.org/I4405286966","display_name":"Instituto Oswaldo Cruz","ror":"https://ror.org/03pww0c55","country_code":"BR","type":"facility","lineage":["https://openalex.org/I4405286966","https://openalex.org/I52325"]},{"id":"https://openalex.org/I52325","display_name":"Funda\u00e7\u00e3o Oswaldo Cruz","ror":"https://ror.org/04jhswv08","country_code":"BR","type":"facility","lineage":["https://openalex.org/I52325"]}],"countries":["BR"],"is_corresponding":true,"raw_author_name":"Erica L. Fonseca","raw_affiliation_strings":["Instituto Oswaldo Cruz, FIOCRUZ, Rio de Janeiro, Brazil. Electronic address: ericafon@ioc.fiocruz.br","Instituto Oswaldo Cruz, FIOCRUZ, Rio de Janeiro, Brazil"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Instituto Oswaldo Cruz, FIOCRUZ, Rio de Janeiro, Brazil. Electronic address: ericafon@ioc.fiocruz.br","institution_ids":["https://openalex.org/I4405286966","https://openalex.org/I52325"]},{"raw_affiliation_string":"Instituto Oswaldo Cruz, FIOCRUZ, Rio de Janeiro, Brazil","institution_ids":["https://openalex.org/I4405286966","https://openalex.org/I52325"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5113675543","display_name":"Fernanda S. Freitas","orcid":"https://orcid.org/0000-0003-2621-5723","observed_orcids":["https://orcid.org/0000-0003-2621-5723"]},"institutions":[{"id":"https://openalex.org/I4405286966","display_name":"Instituto Oswaldo Cruz","ror":"https://ror.org/03pww0c55","country_code":"BR","type":"facility","lineage":["https://openalex.org/I4405286966","https://openalex.org/I52325"]},{"id":"https://openalex.org/I52325","display_name":"Funda\u00e7\u00e3o Oswaldo Cruz","ror":"https://ror.org/04jhswv08","country_code":"BR","type":"facility","lineage":["https://openalex.org/I52325"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Fernanda Freitas","raw_affiliation_strings":["Instituto Oswaldo Cruz, FIOCRUZ, Rio de Janeiro, Brazil. Electronic address: freitasf@ioc.fiocruz.br","Instituto Oswaldo Cruz, FIOCRUZ, Rio de Janeiro, Brazil"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Instituto Oswaldo Cruz, FIOCRUZ, Rio de Janeiro, Brazil. Electronic address: freitasf@ioc.fiocruz.br","institution_ids":["https://openalex.org/I4405286966","https://openalex.org/I52325"]},{"raw_affiliation_string":"Instituto Oswaldo Cruz, FIOCRUZ, Rio de Janeiro, Brazil","institution_ids":["https://openalex.org/I4405286966","https://openalex.org/I52325"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5017055543","display_name":"Sergio Mascarenhas Morgado","orcid":"https://orcid.org/0000-0003-4877-7639","observed_orcids":["https://orcid.org/0000-0003-4877-7639"]},"institutions":[{"id":"https://openalex.org/I4405286966","display_name":"Instituto Oswaldo Cruz","ror":"https://ror.org/03pww0c55","country_code":"BR","type":"facility","lineage":["https://openalex.org/I4405286966","https://openalex.org/I52325"]},{"id":"https://openalex.org/I52325","display_name":"Funda\u00e7\u00e3o Oswaldo Cruz","ror":"https://ror.org/04jhswv08","country_code":"BR","type":"facility","lineage":["https://openalex.org/I52325"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Sergio M. Morgado","raw_affiliation_strings":["Instituto Oswaldo Cruz, FIOCRUZ, Rio de Janeiro, Brazil. Electronic address: sergio.morgado@ioc.fiocruz.br","Instituto Oswaldo Cruz, FIOCRUZ, Rio de Janeiro, Brazil"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Instituto Oswaldo Cruz, FIOCRUZ, Rio de Janeiro, Brazil. Electronic address: sergio.morgado@ioc.fiocruz.br","institution_ids":["https://openalex.org/I4405286966","https://openalex.org/I52325"]},{"raw_affiliation_string":"Instituto Oswaldo Cruz, FIOCRUZ, Rio de Janeiro, Brazil","institution_ids":["https://openalex.org/I4405286966","https://openalex.org/I52325"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5111063926","display_name":"Ros\u00e2ngela Cipriano","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I47327664","display_name":"Universidade Federal do Maranh\u00e3o","ror":"https://ror.org/043fhe951","country_code":"BR","type":"education","lineage":["https://openalex.org/I47327664"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Ros\u00e2ngela Cipriano","raw_affiliation_strings":["Universidade Federal do Maranh\u00e3o, S\u00e3o Lu\u00eds, Maranh\u00e3o, Brazil. Electronic address: rosangela.cipriano@ufma.br","Universidade Federal do Maranh\u00e3o, S\u00e3o Lu\u00eds, Maranh\u00e3o, Brazil"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Universidade Federal do Maranh\u00e3o, S\u00e3o Lu\u00eds, Maranh\u00e3o, Brazil. Electronic address: rosangela.cipriano@ufma.br","institution_ids":["https://openalex.org/I47327664"]},{"raw_affiliation_string":"Universidade Federal do Maranh\u00e3o, S\u00e3o Lu\u00eds, Maranh\u00e3o, Brazil","institution_ids":["https://openalex.org/I47327664"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5103829000","display_name":"Ana Carolina Paulo Vicente","orcid":"https://orcid.org/0000-0001-7086-2042","observed_orcids":["https://orcid.org/0000-0001-7086-2042"]},"institutions":[{"id":"https://openalex.org/I4405286966","display_name":"Instituto Oswaldo Cruz","ror":"https://ror.org/03pww0c55","country_code":"BR","type":"facility","lineage":["https://openalex.org/I4405286966","https://openalex.org/I52325"]},{"id":"https://openalex.org/I52325","display_name":"Funda\u00e7\u00e3o Oswaldo Cruz","ror":"https://ror.org/04jhswv08","country_code":"BR","type":"facility","lineage":["https://openalex.org/I52325"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Ana Carolina P. Vicente","raw_affiliation_strings":["Instituto Oswaldo Cruz, FIOCRUZ, Rio de Janeiro, Brazil. Electronic address: anapaulo@ioc.fiocruz.br","Instituto Oswaldo Cruz, FIOCRUZ, Rio de Janeiro, Brazil"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Instituto Oswaldo Cruz, FIOCRUZ, Rio de Janeiro, Brazil. Electronic address: anapaulo@ioc.fiocruz.br","institution_ids":["https://openalex.org/I4405286966","https://openalex.org/I52325"]},{"raw_affiliation_string":"Instituto Oswaldo Cruz, FIOCRUZ, Rio de Janeiro, Brazil","institution_ids":["https://openalex.org/I4405286966","https://openalex.org/I52325"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5102844322"],"corresponding_institution_ids":["https://openalex.org/I4405286966","https://openalex.org/I52325"],"apc_list":{"value":3790,"currency":"USD","value_usd":3790},"apc_paid":null,"fwci":0.3643,"has_fulltext":false,"cited_by_count":3,"citation_normalized_percentile":{"value":0.46128278,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":88,"max":95},"biblio":{"volume":"907","issue":null,"first_page":"168166","last_page":"168166"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12824","display_name":"Infections and bacterial resistance","score":0.8012999892234802,"subfield":{"id":"https://openalex.org/subfields/2726","display_name":"Microbiology (medical)"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T12824","display_name":"Infections and bacterial resistance","score":0.8012999892234802,"subfield":{"id":"https://openalex.org/subfields/2726","display_name":"Microbiology (medical)"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10147","display_name":"Antibiotic Resistance in Bacteria","score":0.06040000170469284,"subfield":{"id":"https://openalex.org/subfields/2726","display_name":"Microbiology (medical)"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T13849","display_name":"Enterobacteriaceae and Cronobacter Research","score":0.02250000089406967,"subfield":{"id":"https://openalex.org/subfields/2404","display_name":"Microbiology"},"field":{"id":"https://openalex.org/fields/24","display_name":"Immunology and Microbiology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/elizabethkingia-miricola","display_name":"Elizabethkingia miricola","score":1.0},{"id":"https://openalex.org/keywords/antimicrobial-resistance","display_name":"antimicrobial resistance","score":0.7319999933242798},{"id":"https://openalex.org/keywords/opportunistic-bacterial-infection","display_name":"opportunistic bacterial infection","score":0.5220000147819519},{"id":"https://openalex.org/keywords/one-health","display_name":"One Health","score":0.7020000219345093},{"id":"https://openalex.org/keywords/resistome","display_name":"resistome","score":0.6700000166893005},{"id":"https://openalex.org/keywords/virulome","display_name":"virulome","score":0.9990000128746033},{"id":"https://openalex.org/keywords/bacterial-genomics","display_name":"bacterial genomics","score":0.6309999823570251},{"id":"https://openalex.org/keywords/clinical-isolates","display_name":"clinical isolates","score":0.4480000138282776},{"id":"https://openalex.org/keywords/amazon-basin","display_name":"Amazon basin","score":0.7689999938011169},{"id":"https://openalex.org/keywords/emerging-pathogens","display_name":"emerging pathogens","score":0.46700000762939453},{"id":"https://openalex.org/keywords/waterborne-pathogens","display_name":"waterborne pathogens","score":0.5870000123977661}],"concepts":[{"id":"https://openalex.org/C535291247","wikidata":"https://www.wikidata.org/wiki/Q177567","display_name":"Amazon rainforest","level":2,"score":0.7723746299743652},{"id":"https://openalex.org/C2776666601","wikidata":"https://www.wikidata.org/wiki/Q3457855","display_name":"Resistome","level":5,"score":0.724419116973877},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.5645526647567749},{"id":"https://openalex.org/C29376679","wikidata":"https://www.wikidata.org/wiki/Q241741","display_name":"Wildlife","level":2,"score":0.5600444674491882},{"id":"https://openalex.org/C94665300","wikidata":"https://www.wikidata.org/wiki/Q63391344","display_name":"Antibiotic resistance","level":3,"score":0.5526055097579956},{"id":"https://openalex.org/C116675565","wikidata":"https://www.wikidata.org/wiki/Q3241045","display_name":"Outbreak","level":2,"score":0.5271071195602417},{"id":"https://openalex.org/C130217890","wikidata":"https://www.wikidata.org/wiki/Q47041","display_name":"Biodiversity","level":2,"score":0.47942036390304565},{"id":"https://openalex.org/C81977670","wikidata":"https://www.wikidata.org/wiki/Q585259","display_name":"Genetic diversity","level":3,"score":0.46856170892715454},{"id":"https://openalex.org/C89623803","wikidata":"https://www.wikidata.org/wiki/Q12184","display_name":"Pandemic","level":5,"score":0.46322205662727356},{"id":"https://openalex.org/C138816342","wikidata":"https://www.wikidata.org/wiki/Q189603","display_name":"Public health","level":2,"score":0.44827768206596375},{"id":"https://openalex.org/C205649164","wikidata":"https://www.wikidata.org/wiki/Q1071","display_name":"Geography","level":0,"score":0.4040871262550354},{"id":"https://openalex.org/C524204448","wikidata":"https://www.wikidata.org/wiki/Q788926","display_name":"Infectious disease (medical specialty)","level":3,"score":0.31776708364486694},{"id":"https://openalex.org/C18903297","wikidata":"https://www.wikidata.org/wiki/Q7150","display_name":"Ecology","level":1,"score":0.30613774061203003},{"id":"https://openalex.org/C99454951","wikidata":"https://www.wikidata.org/wiki/Q932068","display_name":"Environmental health","level":1,"score":0.30213749408721924},{"id":"https://openalex.org/C2779134260","wikidata":"https://www.wikidata.org/wiki/Q12136","display_name":"Disease","level":2,"score":0.2579227685928345},{"id":"https://openalex.org/C501593827","wikidata":"https://www.wikidata.org/wiki/Q12187","display_name":"Antibiotics","level":2,"score":0.23475390672683716},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.21735715866088867},{"id":"https://openalex.org/C3008058167","wikidata":"https://www.wikidata.org/wiki/Q84263196","display_name":"Coronavirus disease 2019 (COVID-19)","level":4,"score":0.21496781706809998},{"id":"https://openalex.org/C159047783","wikidata":"https://www.wikidata.org/wiki/Q7215","display_name":"Virology","level":1,"score":0.17561137676239014},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.13861268758773804},{"id":"https://openalex.org/C2908647359","wikidata":"https://www.wikidata.org/wiki/Q2625603","display_name":"Population","level":2,"score":0.11240532994270325},{"id":"https://openalex.org/C159110408","wikidata":"https://www.wikidata.org/wiki/Q121176","display_name":"Nursing","level":1,"score":0.0},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.0},{"id":"https://openalex.org/C2776650774","wikidata":"https://www.wikidata.org/wiki/Q420197","display_name":"Integron","level":4,"score":0.0}],"mesh":[],"locations_count":4,"locations":[{"id":"doi:10.1016/j.scitotenv.2023.168166","doi":"https://doi.org/10.1016/j.scitotenv.2023.168166","is_oa":false,"landing_page_url":"https://doi.org/10.1016/j.scitotenv.2023.168166","pdf_url":null,"source":{"id":"https://openalex.org/S86852077","display_name":"The Science of The Total Environment","issn_l":"0048-9697","issn":["0048-9697","1879-1026"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["anvur-class-a","anvur-scientific","cwts-core","jufo-2","medline","norway-2","poland-200","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Science of The Total Environment","raw_type":"journal-article"},{"id":"doi:10.2139/ssrn.4524651","doi":"https://doi.org/10.2139/ssrn.4524651","is_oa":true,"landing_page_url":"https://doi.org/10.2139/ssrn.4524651","pdf_url":null,"source":{"id":"https://openalex.org/S4210172589","display_name":"SSRN Electronic Journal","issn_l":"1556-5068","issn":["1556-5068"],"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1318003438","host_organization_name":"RELX Group (Netherlands)","host_organization_lineage":["https://openalex.org/I1318003438"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"posted-content"},{"id":"pmid:39491192","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/39491192","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"The Science of the total environment","raw_type":"Journal Article"},{"id":"pmh:oai:arca.fiocruz.br:icict/67223","doi":null,"is_oa":false,"landing_page_url":"https://arca.fiocruz.br/handle/icict/67223","pdf_url":null,"source":{"id":"https://openalex.org/S7407055450","display_name":"Arca - Reposit\u00f3rio Institucional da Fiocruz","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"journal article"}],"best_oa_location":{"id":"doi:10.2139/ssrn.4524651","doi":"https://doi.org/10.2139/ssrn.4524651","is_oa":true,"landing_page_url":"https://doi.org/10.2139/ssrn.4524651","pdf_url":null,"source":{"id":"https://openalex.org/S4210172589","display_name":"SSRN Electronic Journal","issn_l":"1556-5068","issn":["1556-5068"],"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1318003438","host_organization_name":"RELX Group (Netherlands)","host_organization_lineage":["https://openalex.org/I1318003438"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"posted-content"},"sustainable_development_goals":[{"score":0.9537000060081482,"display_name":"Good health and well-being","id":"https://metadata.un.org/sdg/3"}],"study_designs":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320322749","display_name":"Funda\u00e7\u00e3o Carlos Chagas Filho de Amparo \u00e0 Pesquisa do Estado do Rio de Janeiro","ror":"https://ror.org/03kk0s825"},{"id":"https://openalex.org/F4320323917","display_name":"Funda\u00e7\u00e3o Oswaldo Cruz","ror":"https://ror.org/04jhswv08"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":20,"referenced_works":["https://openalex.org/W2096093282","https://openalex.org/W2111647009","https://openalex.org/W2120902911","https://openalex.org/W2122673596","https://openalex.org/W2765842864","https://openalex.org/W2772896333","https://openalex.org/W2905118362","https://openalex.org/W2949848068","https://openalex.org/W2982531601","https://openalex.org/W3003423186","https://openalex.org/W3018532479","https://openalex.org/W3035886241","https://openalex.org/W3047428499","https://openalex.org/W3156458251","https://openalex.org/W4200470472","https://openalex.org/W4229025067","https://openalex.org/W4283364026","https://openalex.org/W4318200591","https://openalex.org/W4324147644","https://openalex.org/W6769556952"],"related_works":["https://openalex.org/W4385672480","https://openalex.org/W7163529444","https://openalex.org/W2995084651","https://openalex.org/W4412159348","https://openalex.org/W4393102764","https://openalex.org/W3217504860","https://openalex.org/W4409841618","https://openalex.org/W3035886241","https://openalex.org/W4413403153","https://openalex.org/W7151625373"],"abstract_inverted_index":null,"counts_by_year":[{"year":2025,"cited_by_count":2},{"year":2024,"cited_by_count":1}],"updated_date":"2026-11-10T11:39:43.021295","created_date":"2023-11-01T00:00:00"}