{"id":"https://openalex.org/W4387905312","doi":"https://doi.org/10.22541/au.169812932.23834906/v1","title":"Genome-wide target capture baits for endangered shark species","display_name":"Genome-wide target capture baits for endangered shark species","publication_year":2023,"publication_date":"2023-10-24","ids":{"openalex":"https://openalex.org/W4387905312","doi":"https://doi.org/10.22541/au.169812932.23834906/v1"},"language":"en","primary_location":{"id":"doi:10.22541/au.169812932.23834906/v1","doi":"https://doi.org/10.22541/au.169812932.23834906/v1","is_oa":false,"landing_page_url":"https://doi.org/10.22541/au.169812932.23834906/v1","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"acceptedVersion","is_accepted":true,"is_published":false,"raw_source_name":null,"raw_type":"posted-content"},"volume":null,"type":"preprint","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5060810631","display_name":"C. Wagner","orcid":"https://orcid.org/0000-0001-7213-4778","observed_orcids":["https://orcid.org/0000-0001-7213-4778"]},"institutions":[{"id":"https://openalex.org/I2802079931","display_name":"Nord University","ror":"https://ror.org/030mwrt98","country_code":"NO","type":"education","lineage":["https://openalex.org/I2802079931"]}],"countries":["NO"],"is_corresponding":true,"raw_author_name":"Clara Isabel Wagner","raw_affiliation_strings":["Nord universitet"],"raw_orcid":"https://orcid.org/0000-0001-7213-4778","affiliations":[{"raw_affiliation_string":"Nord universitet","institution_ids":["https://openalex.org/I2802079931"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5050146246","display_name":"Marvin Choquet","orcid":"https://orcid.org/0000-0001-6719-2332","observed_orcids":["https://orcid.org/0000-0001-6719-2332"]},"institutions":[{"id":"https://openalex.org/I184942183","display_name":"University of Oslo","ror":"https://ror.org/01xtthb56","country_code":"NO","type":"education","lineage":["https://openalex.org/I184942183"]}],"countries":["NO"],"is_corresponding":false,"raw_author_name":"Marvin Choquet","raw_affiliation_strings":["University of Oslo Faculty of Mathematics and Natural Sciences"],"raw_orcid":"https://orcid.org/0000-0001-6719-2332","affiliations":[{"raw_affiliation_string":"University of Oslo Faculty of Mathematics and Natural Sciences","institution_ids":["https://openalex.org/I184942183"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Irina Smolina","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I2802079931","display_name":"Nord University","ror":"https://ror.org/030mwrt98","country_code":"NO","type":"education","lineage":["https://openalex.org/I2802079931"]}],"countries":["NO"],"is_corresponding":false,"raw_author_name":"Irina Smolina","raw_affiliation_strings":["Nord Universitetet"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Nord Universitetet","institution_ids":["https://openalex.org/I2802079931"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Cathy S Jones","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I195460627","display_name":"University of Aberdeen","ror":"https://ror.org/016476m91","country_code":"GB","type":"education","lineage":["https://openalex.org/I195460627"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Cathy S Jones","raw_affiliation_strings":["University of Aberdeen"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of Aberdeen","institution_ids":["https://openalex.org/I195460627"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5023696683","display_name":"Leslie Robert Noble","orcid":"https://orcid.org/0000-0003-3076-0759","observed_orcids":["https://orcid.org/0000-0003-3076-0759"]},"institutions":[{"id":"https://openalex.org/I2802079931","display_name":"Nord University","ror":"https://ror.org/030mwrt98","country_code":"NO","type":"education","lineage":["https://openalex.org/I2802079931"]}],"countries":["NO"],"is_corresponding":false,"raw_author_name":"Leslie Noble","raw_affiliation_strings":["Nord universitet"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Nord universitet","institution_ids":["https://openalex.org/I2802079931"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5066305086","display_name":"Galice Guillaume Hoarau","orcid":"https://orcid.org/0000-0002-0593-0894","observed_orcids":["https://orcid.org/0000-0002-0593-0894"]},"institutions":[{"id":"https://openalex.org/I2802079931","display_name":"Nord University","ror":"https://ror.org/030mwrt98","country_code":"NO","type":"education","lineage":["https://openalex.org/I2802079931"]}],"countries":["NO"],"is_corresponding":false,"raw_author_name":"Galice Hoarau","raw_affiliation_strings":["Nord Universitetet"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Nord Universitetet","institution_ids":["https://openalex.org/I2802079931"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5060810631"],"corresponding_institution_ids":["https://openalex.org/I2802079931"],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":false,"cited_by_count":1,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10012","display_name":"Genetic diversity and population structure","score":0.7627000212669373,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10012","display_name":"Genetic diversity and population structure","score":0.7627000212669373,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.10000000149011612,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11387","display_name":"Ichthyology and Marine Biology","score":0.058800000697374344,"subfield":{"id":"https://openalex.org/subfields/2309","display_name":"Nature and Landscape Conservation"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/snp-markers","display_name":"SNP markers","score":0.7099999785423279},{"id":"https://openalex.org/keywords/lamniformes","display_name":"Lamniformes","score":0.7870000004768372},{"id":"https://openalex.org/keywords/population-genetics","display_name":"population genetics","score":0.6589999794960022},{"id":"https://openalex.org/keywords/conservation-genetics","display_name":"conservation genetics","score":0.5590000152587891},{"id":"https://openalex.org/keywords/biallelic-snps","display_name":"biallelic SNPs","score":0.6639999747276306}],"concepts":[{"id":"https://openalex.org/C179345059","wikidata":"https://www.wikidata.org/wiki/Q11394","display_name":"Endangered species","level":3,"score":0.8169782161712646},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.7729907035827637},{"id":"https://openalex.org/C24518262","wikidata":"https://www.wikidata.org/wiki/Q16197023","display_name":"Threatened species","level":3,"score":0.5478711128234863},{"id":"https://openalex.org/C2908647359","wikidata":"https://www.wikidata.org/wiki/Q2625603","display_name":"Population","level":2,"score":0.5199757814407349},{"id":"https://openalex.org/C78458016","wikidata":"https://www.wikidata.org/wiki/Q840400","display_name":"Evolutionary biology","level":1,"score":0.5134114027023315},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.512150764465332},{"id":"https://openalex.org/C153209595","wikidata":"https://www.wikidata.org/wiki/Q501128","display_name":"Single-nucleotide polymorphism","level":4,"score":0.4721237123012543},{"id":"https://openalex.org/C204323151","wikidata":"https://www.wikidata.org/wiki/Q905424","display_name":"Range (aeronautics)","level":2,"score":0.4542172849178314},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.3054518699645996},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.2130683958530426},{"id":"https://openalex.org/C18903297","wikidata":"https://www.wikidata.org/wiki/Q7150","display_name":"Ecology","level":1,"score":0.209212064743042},{"id":"https://openalex.org/C135763542","wikidata":"https://www.wikidata.org/wiki/Q106016","display_name":"Genotype","level":3,"score":0.07593193650245667},{"id":"https://openalex.org/C192562407","wikidata":"https://www.wikidata.org/wiki/Q228736","display_name":"Materials science","level":0,"score":0.0},{"id":"https://openalex.org/C185933670","wikidata":"https://www.wikidata.org/wiki/Q52105","display_name":"Habitat","level":2,"score":0.0},{"id":"https://openalex.org/C159985019","wikidata":"https://www.wikidata.org/wiki/Q181790","display_name":"Composite material","level":1,"score":0.0},{"id":"https://openalex.org/C149923435","wikidata":"https://www.wikidata.org/wiki/Q37732","display_name":"Demography","level":1,"score":0.0},{"id":"https://openalex.org/C144024400","wikidata":"https://www.wikidata.org/wiki/Q21201","display_name":"Sociology","level":0,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.22541/au.169812932.23834906/v1","doi":"https://doi.org/10.22541/au.169812932.23834906/v1","is_oa":false,"landing_page_url":"https://doi.org/10.22541/au.169812932.23834906/v1","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"acceptedVersion","is_accepted":true,"is_published":false,"raw_source_name":null,"raw_type":"posted-content"}],"best_oa_location":null,"sustainable_development_goals":[{"score":0.7778000235557556,"id":"https://metadata.un.org/sdg/14","display_name":"Life below water"}],"sustainable_development_goals_aurora":[{"score":0.44999998807907104,"id":"https://metadata.un.org/sdg/15","display_name":"Life on land"}],"study_designs":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":0,"referenced_works":[],"related_works":["https://openalex.org/W2155737275","https://openalex.org/W4318261965","https://openalex.org/W1887295403","https://openalex.org/W7213468218","https://openalex.org/W2515048441","https://openalex.org/W7055832943","https://openalex.org/W4406840033","https://openalex.org/W2623746085","https://openalex.org/W2569718921","https://openalex.org/W4290182763"],"abstract_inverted_index":{"More":[0],"than":[1],"30%":[2],"of":[3,25,54,76,116],"extant":[4],"shark":[5,38,63,117],"species":[6,67,99],"are":[7],"classified":[8],"as":[9],"threatened":[10],"with":[11],"extinction,":[12],"yet":[13],"reliable":[14],"population-level":[15],"data":[16],"is":[17],"often":[18],"rare,":[19],"frequently":[20],"due":[21],"to":[22],"a":[23,31,42,55,113],"lack":[24],"genomic":[26],"resources.":[27],"Here":[28],"we":[29],"present":[30],"new":[32],"genome-wide":[33],"marker":[34,105],"set":[35,47,106],"for":[36,110],"endangered":[37],"species.":[39],"We":[40],"developed":[41],"target":[43,83],"gene":[44],"capture":[45],"bait":[46],"based":[48],"on":[49,61],"the":[50,88],"transcriptome":[51],"and":[52,58,74,123,126],"genome":[53],"Lamnid":[56],"shark,":[57],"tested":[59],"it":[60],"36":[62],"specimens,":[64],"representing":[65],"seven":[66],"from":[68],"three":[69],"orders.":[70],"Illumina":[71],"read":[72],"mapping":[73],"calling":[75],"Single":[77],"Nucleotide":[78],"Polymorphisms":[79],"(SNPs)":[80],"showed":[81],"high":[82],"recovery":[84],"rates,":[85],"especially":[86],"in":[87,97,112],"order":[89],"Lamniformes,":[90],"providing":[91],"several":[92],"thousand":[93],"detected":[94],"biallelic":[95],"SNPs":[96],"each":[98],"tested.":[100],"Our":[101],"results":[102],"show":[103],"this":[104],"can":[107],"be":[108],"used":[109],"SNP-calling":[111],"broad":[114],"range":[115],"species,":[118],"enabling":[119],"detailed":[120],"population":[121],"assessments":[122],"other":[124],"ecological":[125],"evolutionary":[127],"studies.":[128]},"counts_by_year":[{"year":2024,"cited_by_count":1}],"updated_date":"2026-10-14T16:39:01.820549","created_date":"2023-10-25T00:00:00"}
