{"id":"https://openalex.org/W4387737539","doi":"https://doi.org/10.1038/s41467-023-42151-3","title":"Conserved enhancers control notochord expression of vertebrate Brachyury","display_name":"Conserved enhancers control notochord expression of vertebrate Brachyury","publication_year":2023,"publication_date":"2023-10-18","ids":{"openalex":"https://openalex.org/W4387737539","doi":"https://doi.org/10.1038/s41467-023-42151-3","pmid":"https://pubmed.ncbi.nlm.nih.gov/37852970","pmcid":"https://www.ncbi.nlm.nih.gov/pmc/articles/10584899"},"language":"en","primary_location":{"id":"doi:10.1038/s41467-023-42151-3","doi":"https://doi.org/10.1038/s41467-023-42151-3","is_oa":true,"landing_page_url":"https://doi.org/10.1038/s41467-023-42151-3","pdf_url":null,"source":{"id":"https://openalex.org/S64187185","display_name":"Nature Communications","issn_l":"2041-1723","issn":["2041-1723"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["anvur-class-a","anvur-scientific","cwts-core","doaj","dongbi-a","doyens","jufo-3","ki-jl-3","medline","norway-2","oarl","poland-200","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310319908","host_organization_name":"Nature Portfolio","host_organization_lineage":["https://openalex.org/P4310319908","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Nature Portfolio","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nature Communications","raw_type":"journal-article"},"volume":null,"type":"article","is_traditional":true,"indexed_in":["crossref","datacite","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://doi.org/10.1038/s41467-023-42151-3","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5026248582","display_name":"Cassie L. Kemmler","orcid":"https://orcid.org/0000-0002-4516-029X","observed_orcids":["https://orcid.org/0000-0002-4516-029X"]},"institutions":[{"id":"https://openalex.org/I51713134","display_name":"University of Colorado Anschutz","ror":"https://ror.org/03wmf1y16","country_code":"US","type":"education","lineage":["https://openalex.org/I51713134"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Cassie L. Kemmler","raw_affiliation_strings":["Section of Developmental Biology, Department of Pediatrics, University of Colorado Anschutz Medical Campus, Aurora, CO, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Section of Developmental Biology, Department of Pediatrics, University of Colorado Anschutz Medical Campus, Aurora, CO, USA","institution_ids":["https://openalex.org/I51713134"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5016222821","display_name":"Jana Smolikova","orcid":"https://orcid.org/0009-0009-1262-4500","observed_orcids":["https://orcid.org/0009-0009-1262-4500"]},"institutions":[{"id":"https://openalex.org/I4210138103","display_name":"Czech Academy of Sciences, Institute of Molecular Genetics","ror":"https://ror.org/045syc608","country_code":"CZ","type":"facility","lineage":["https://openalex.org/I202391551","https://openalex.org/I4210138103"]}],"countries":["CZ"],"is_corresponding":false,"raw_author_name":"Jana Smolikova","raw_affiliation_strings":["Institute of Molecular Genetics of the ASCR, v. v. i., Prague, Czech Republic"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Molecular Genetics of the ASCR, v. v. i., Prague, Czech Republic","institution_ids":["https://openalex.org/I4210138103"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5047465759","display_name":"Hannah R. Moran","orcid":"https://orcid.org/0000-0001-8056-5762","observed_orcids":["https://orcid.org/0000-0001-8056-5762"]},"institutions":[{"id":"https://openalex.org/I51713134","display_name":"University of Colorado Anschutz","ror":"https://ror.org/03wmf1y16","country_code":"US","type":"education","lineage":["https://openalex.org/I51713134"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Hannah R. Moran","raw_affiliation_strings":["Section of Developmental Biology, Department of Pediatrics, University of Colorado Anschutz Medical Campus, Aurora, CO, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Section of Developmental Biology, Department of Pediatrics, University of Colorado Anschutz Medical Campus, Aurora, CO, USA","institution_ids":["https://openalex.org/I51713134"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5050300019","display_name":"Brandon J. Mannion","orcid":"https://orcid.org/0000-0002-1149-3790","observed_orcids":["https://orcid.org/0000-0002-1149-3790"]},"institutions":[{"id":"https://openalex.org/I148283060","display_name":"Lawrence Berkeley National Laboratory","ror":"https://ror.org/02jbv0t02","country_code":"US","type":"facility","lineage":["https://openalex.org/I1330989302","https://openalex.org/I148283060","https://openalex.org/I39565521"]},{"id":"https://openalex.org/I95457486","display_name":"University of California, Berkeley","ror":"https://ror.org/01an7q238","country_code":"US","type":"education","lineage":["https://openalex.org/I95457486"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Brandon J. Mannion","raw_affiliation_strings":["Comparative Biochemistry Program, University of California, Berkeley, CA, 94720, USA","Environmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratory, Berkeley, CA, USA"],"raw_orcid":"https://orcid.org/0000-0002-1149-3790","affiliations":[{"raw_affiliation_string":"Comparative Biochemistry Program, University of California, Berkeley, CA, 94720, USA","institution_ids":["https://openalex.org/I95457486"]},{"raw_affiliation_string":"Environmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratory, Berkeley, CA, USA","institution_ids":["https://openalex.org/I148283060"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5075190219","display_name":"Dunja Knapp","orcid":"https://orcid.org/0000-0002-7533-2208","observed_orcids":["https://orcid.org/0000-0002-7533-2208"]},"institutions":[{"id":"https://openalex.org/I4405266872","display_name":"Center for Regenerative Therapies Dresden","ror":"https://ror.org/00490nx58","country_code":"DE","type":"facility","lineage":["https://openalex.org/I4405266872","https://openalex.org/I4405279746","https://openalex.org/I78650965"]},{"id":"https://openalex.org/I78650965","display_name":"Technische Universit\u00e4t Dresden","ror":"https://ror.org/042aqky30","country_code":"DE","type":"education","lineage":["https://openalex.org/I78650965"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Dunja Knapp","raw_affiliation_strings":["Technische Universit\u00e4t Dresden, CRTD Center for Regenerative Therapies Dresden, Dresden, Germany"],"raw_orcid":"https://orcid.org/0000-0002-7533-2208","affiliations":[{"raw_affiliation_string":"Technische Universit\u00e4t Dresden, CRTD Center for Regenerative Therapies Dresden, Dresden, Germany","institution_ids":["https://openalex.org/I4405266872","https://openalex.org/I78650965"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5036881461","display_name":"Fabian Lim","orcid":"https://orcid.org/0000-0001-5628-7707","observed_orcids":["https://orcid.org/0000-0001-5628-7707"]},"institutions":[{"id":"https://openalex.org/I36258959","display_name":"University of California San Diego","ror":"https://ror.org/0168r3w48","country_code":"US","type":"education","lineage":["https://openalex.org/I36258959"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Fabian Lim","raw_affiliation_strings":["Biological Sciences Graduate Program, University of California San Diego, La Jolla, CA, USA","Department of Medicine, Health Sciences, University of California San Diego, La Jolla, CA, USA","Department of Molecular Biology, Biological Sciences, University of California San Diego, La Jolla, CA, USA"],"raw_orcid":"https://orcid.org/0000-0001-5628-7707","affiliations":[{"raw_affiliation_string":"Biological Sciences Graduate Program, University of California San Diego, La Jolla, CA, USA","institution_ids":["https://openalex.org/I36258959"]},{"raw_affiliation_string":"Department of Medicine, Health Sciences, University of California San Diego, La Jolla, CA, USA","institution_ids":["https://openalex.org/I36258959"]},{"raw_affiliation_string":"Department of Molecular Biology, Biological Sciences, University of California San Diego, La Jolla, CA, USA","institution_ids":["https://openalex.org/I36258959"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5013655170","display_name":"Anna Czarkwiani","orcid":"https://orcid.org/0000-0002-8845-3113","observed_orcids":["https://orcid.org/0000-0002-8845-3113"]},"institutions":[{"id":"https://openalex.org/I4405266872","display_name":"Center for Regenerative Therapies Dresden","ror":"https://ror.org/00490nx58","country_code":"DE","type":"facility","lineage":["https://openalex.org/I4405266872","https://openalex.org/I4405279746","https://openalex.org/I78650965"]},{"id":"https://openalex.org/I78650965","display_name":"Technische Universit\u00e4t Dresden","ror":"https://ror.org/042aqky30","country_code":"DE","type":"education","lineage":["https://openalex.org/I78650965"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Anna Czarkwiani","raw_affiliation_strings":["Technische Universit\u00e4t Dresden, CRTD Center for Regenerative Therapies Dresden, Dresden, Germany"],"raw_orcid":"https://orcid.org/0000-0002-8845-3113","affiliations":[{"raw_affiliation_string":"Technische Universit\u00e4t Dresden, CRTD Center for Regenerative Therapies Dresden, Dresden, Germany","institution_ids":["https://openalex.org/I4405266872","https://openalex.org/I78650965"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5022475487","display_name":"Viviana E. Hermosilla","orcid":"https://orcid.org/0000-0002-2495-4867","observed_orcids":["https://orcid.org/0000-0002-2495-4867"]},"institutions":[{"id":"https://openalex.org/I180670191","display_name":"University of California, San Francisco","ror":"https://ror.org/043mz5j54","country_code":"US","type":"education","lineage":["https://openalex.org/I180670191"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Viviana Hermosilla Aguayo","raw_affiliation_strings":["Department of Anatomy, University of California San Francisco, San Francisco, CA, USA","Department of Orofacial Sciences, University of California San Francisco, San Francisco, CA, USA","Institute for Human Genetics, University of California San Francisco, San Francisco, CA, USA","Program in Craniofacial Biology, University of California San Francisco, San Francisco, CA, USA"],"raw_orcid":"https://orcid.org/0000-0002-2495-4867","affiliations":[{"raw_affiliation_string":"Department of Anatomy, University of California San Francisco, San Francisco, CA, USA","institution_ids":["https://openalex.org/I180670191"]},{"raw_affiliation_string":"Department of Orofacial Sciences, University of California San Francisco, San Francisco, CA, USA","institution_ids":["https://openalex.org/I180670191"]},{"raw_affiliation_string":"Institute for Human Genetics, University of California San Francisco, San Francisco, CA, USA","institution_ids":["https://openalex.org/I180670191"]},{"raw_affiliation_string":"Program in Craniofacial Biology, University of California San Francisco, San Francisco, CA, USA","institution_ids":["https://openalex.org/I180670191"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Vincent Rapp","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I118564535","display_name":"University of Bern","ror":"https://ror.org/02k7v4d05","country_code":"CH","type":"education","lineage":["https://openalex.org/I118564535"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Vincent Rapp","raw_affiliation_strings":["Department for BioMedical Research (DBMR), University of Bern, Bern, Switzerland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department for BioMedical Research (DBMR), University of Bern, Bern, Switzerland","institution_ids":["https://openalex.org/I118564535"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5072774555","display_name":"Olivia E. Fitch","orcid":"https://orcid.org/0000-0003-4702-8214","observed_orcids":["https://orcid.org/0000-0003-4702-8214"]},"institutions":[{"id":"https://openalex.org/I87216513","display_name":"Michigan State University","ror":"https://ror.org/05hs6h993","country_code":"US","type":"education","lineage":["https://openalex.org/I87216513"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Olivia E. Fitch","raw_affiliation_strings":["Department of Integrative Biology and Ecology, Evolution and Behavior Program, Michigan State University, East Lansing, MI, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Integrative Biology and Ecology, Evolution and Behavior Program, Michigan State University, East Lansing, MI, USA","institution_ids":["https://openalex.org/I87216513"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5083078848","display_name":"Seraina B\u00f6tschi","orcid":"https://orcid.org/0000-0002-2721-133X","observed_orcids":["https://orcid.org/0000-0002-2721-133X"]},"institutions":[{"id":"https://openalex.org/I202697423","display_name":"University of Zurich","ror":"https://ror.org/02crff812","country_code":"CH","type":"education","lineage":["https://openalex.org/I202697423"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Seraina B\u00f6tschi","raw_affiliation_strings":["Institute of Molecular Life Sciences, University of Zurich, Zurich, Switzerland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Molecular Life Sciences, University of Zurich, Zurich, Switzerland","institution_ids":["https://openalex.org/I202697423"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5012615456","display_name":"Licia Selleri","orcid":"https://orcid.org/0000-0002-6817-1469","observed_orcids":["https://orcid.org/0000-0002-6817-1469"]},"institutions":[{"id":"https://openalex.org/I180670191","display_name":"University of California, San Francisco","ror":"https://ror.org/043mz5j54","country_code":"US","type":"education","lineage":["https://openalex.org/I180670191"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Licia Selleri","raw_affiliation_strings":["Department of Anatomy, University of California San Francisco, San Francisco, CA, USA","Department of Orofacial Sciences, University of California San Francisco, San Francisco, CA, USA","Institute for Human Genetics, University of California San Francisco, San Francisco, CA, USA","Program in Craniofacial Biology, University of California San Francisco, San Francisco, CA, USA"],"raw_orcid":"https://orcid.org/0000-0002-6817-1469","affiliations":[{"raw_affiliation_string":"Department of Anatomy, University of California San Francisco, San Francisco, CA, USA","institution_ids":["https://openalex.org/I180670191"]},{"raw_affiliation_string":"Department of Orofacial Sciences, University of California San Francisco, San Francisco, CA, USA","institution_ids":["https://openalex.org/I180670191"]},{"raw_affiliation_string":"Institute for Human Genetics, University of California San Francisco, San Francisco, CA, USA","institution_ids":["https://openalex.org/I180670191"]},{"raw_affiliation_string":"Program in Craniofacial Biology, University of California San Francisco, San Francisco, CA, USA","institution_ids":["https://openalex.org/I180670191"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5031598839","display_name":"Emma K. Farley","orcid":"https://orcid.org/0000-0002-9241-247X","observed_orcids":["https://orcid.org/0000-0002-9241-247X"]},"institutions":[{"id":"https://openalex.org/I36258959","display_name":"University of California San Diego","ror":"https://ror.org/0168r3w48","country_code":"US","type":"education","lineage":["https://openalex.org/I36258959"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Emma Farley","raw_affiliation_strings":["Department of Medicine, Health Sciences, University of California San Diego, La Jolla, CA, USA","Department of Molecular Biology, Biological Sciences, University of California San Diego, La Jolla, CA, USA"],"raw_orcid":"https://orcid.org/0000-0002-9241-247X","affiliations":[{"raw_affiliation_string":"Department of Medicine, Health Sciences, University of California San Diego, La Jolla, CA, USA","institution_ids":["https://openalex.org/I36258959"]},{"raw_affiliation_string":"Department of Molecular Biology, Biological Sciences, University of California San Diego, La Jolla, CA, USA","institution_ids":["https://openalex.org/I36258959"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5060807605","display_name":"Ingo Braasch","orcid":"https://orcid.org/0000-0003-4766-611X","observed_orcids":["https://orcid.org/0000-0003-4766-611X"]},"institutions":[{"id":"https://openalex.org/I87216513","display_name":"Michigan State University","ror":"https://ror.org/05hs6h993","country_code":"US","type":"education","lineage":["https://openalex.org/I87216513"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Ingo Braasch","raw_affiliation_strings":["Department of Integrative Biology and Ecology, Evolution and Behavior Program, Michigan State University, East Lansing, MI, USA"],"raw_orcid":"https://orcid.org/0000-0003-4766-611X","affiliations":[{"raw_affiliation_string":"Department of Integrative Biology and Ecology, Evolution and Behavior Program, Michigan State University, East Lansing, MI, USA","institution_ids":["https://openalex.org/I87216513"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5083484332","display_name":"Maximina Hee Yun","orcid":"https://orcid.org/0000-0001-9019-2453","observed_orcids":["https://orcid.org/0000-0001-9019-2453"]},"institutions":[{"id":"https://openalex.org/I149899117","display_name":"Max Planck Society","ror":"https://ror.org/01hhn8329","country_code":"DE","type":"nonprofit","lineage":["https://openalex.org/I149899117"]},{"id":"https://openalex.org/I4210159854","display_name":"Max Planck Institute of Molecular Cell Biology and Genetics","ror":"https://ror.org/05b8d3w18","country_code":"DE","type":"facility","lineage":["https://openalex.org/I149899117","https://openalex.org/I4210159854"]},{"id":"https://openalex.org/I4405266872","display_name":"Center for Regenerative Therapies Dresden","ror":"https://ror.org/00490nx58","country_code":"DE","type":"facility","lineage":["https://openalex.org/I4405266872","https://openalex.org/I4405279746","https://openalex.org/I78650965"]},{"id":"https://openalex.org/I4405267341","display_name":"Physics of Life","ror":"https://ror.org/029yt9178","country_code":"DE","type":"facility","lineage":["https://openalex.org/I4405267341","https://openalex.org/I78650965"]},{"id":"https://openalex.org/I78650965","display_name":"Technische Universit\u00e4t Dresden","ror":"https://ror.org/042aqky30","country_code":"DE","type":"education","lineage":["https://openalex.org/I78650965"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Maximina Yun","raw_affiliation_strings":["Cluster of Excellence Physics of Life, Technische Universit\u00e4t Dresden, Dresden, Germany","Max Planck Institute for Molecular Cell Biology and Genetics, Dresden, Germany","Technische Universit\u00e4t Dresden, CRTD Center for Regenerative Therapies Dresden, Dresden, Germany"],"raw_orcid":"https://orcid.org/0000-0001-9019-2453","affiliations":[{"raw_affiliation_string":"Cluster of Excellence Physics of Life, Technische Universit\u00e4t Dresden, Dresden, Germany","institution_ids":["https://openalex.org/I4405267341","https://openalex.org/I78650965"]},{"raw_affiliation_string":"Max Planck Institute for Molecular Cell Biology and Genetics, Dresden, Germany","institution_ids":["https://openalex.org/I149899117","https://openalex.org/I4210159854"]},{"raw_affiliation_string":"Technische Universit\u00e4t Dresden, CRTD Center for Regenerative Therapies Dresden, Dresden, Germany","institution_ids":["https://openalex.org/I4405266872","https://openalex.org/I78650965"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5002417563","display_name":"Axel Visel","orcid":"https://orcid.org/0000-0002-4130-7784","observed_orcids":["https://orcid.org/0000-0002-4130-7784"]},"institutions":[{"id":"https://openalex.org/I148283060","display_name":"Lawrence Berkeley National Laboratory","ror":"https://ror.org/02jbv0t02","country_code":"US","type":"facility","lineage":["https://openalex.org/I1330989302","https://openalex.org/I148283060","https://openalex.org/I39565521"]},{"id":"https://openalex.org/I156087764","display_name":"University of California, Merced","ror":"https://ror.org/00d9ah105","country_code":"US","type":"education","lineage":["https://openalex.org/I156087764"]},{"id":"https://openalex.org/I196679689","display_name":"Joint Genome Institute","ror":"https://ror.org/04xm1d337","country_code":"US","type":"facility","lineage":["https://openalex.org/I1330989302","https://openalex.org/I148283060","https://openalex.org/I196679689","https://openalex.org/I39565521"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Axel Visel","raw_affiliation_strings":["Environmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratory, Berkeley, CA, USA","School of Natural Sciences, University of California Merced, Merced, CA, USA","US Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, USA"],"raw_orcid":"https://orcid.org/0000-0002-4130-7784","affiliations":[{"raw_affiliation_string":"Environmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratory, Berkeley, CA, USA","institution_ids":["https://openalex.org/I148283060"]},{"raw_affiliation_string":"School of Natural Sciences, University of California Merced, Merced, CA, USA","institution_ids":["https://openalex.org/I156087764"]},{"raw_affiliation_string":"US Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, USA","institution_ids":["https://openalex.org/I148283060","https://openalex.org/I196679689"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5056518897","display_name":"Marco Osterwalder","orcid":"https://orcid.org/0000-0002-1969-2313","observed_orcids":["https://orcid.org/0000-0002-1969-2313"]},"institutions":[{"id":"https://openalex.org/I118564535","display_name":"University of Bern","ror":"https://ror.org/02k7v4d05","country_code":"CH","type":"education","lineage":["https://openalex.org/I118564535"]},{"id":"https://openalex.org/I148283060","display_name":"Lawrence Berkeley National Laboratory","ror":"https://ror.org/02jbv0t02","country_code":"US","type":"facility","lineage":["https://openalex.org/I1330989302","https://openalex.org/I148283060","https://openalex.org/I39565521"]},{"id":"https://openalex.org/I2801112126","display_name":"University Hospital of Bern","ror":"https://ror.org/01q9sj412","country_code":"CH","type":"healthcare","lineage":["https://openalex.org/I2801112126"]}],"countries":["CH","US"],"is_corresponding":false,"raw_author_name":"Marco Osterwalder","raw_affiliation_strings":["Department for BioMedical Research (DBMR), University of Bern, Bern, Switzerland","Department of Cardiology, Bern University Hospital, Bern, Switzerland","Environmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratory, Berkeley, CA, USA"],"raw_orcid":"https://orcid.org/0000-0002-1969-2313","affiliations":[{"raw_affiliation_string":"Department for BioMedical Research (DBMR), University of Bern, Bern, Switzerland","institution_ids":["https://openalex.org/I118564535"]},{"raw_affiliation_string":"Department of Cardiology, Bern University Hospital, Bern, Switzerland","institution_ids":["https://openalex.org/I2801112126"]},{"raw_affiliation_string":"Environmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratory, Berkeley, CA, USA","institution_ids":["https://openalex.org/I148283060"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5023446529","display_name":"Christian Mosimann","orcid":"https://orcid.org/0000-0002-0749-2576","observed_orcids":["https://orcid.org/0000-0002-0749-2576"]},"institutions":[{"id":"https://openalex.org/I51713134","display_name":"University of Colorado Anschutz","ror":"https://ror.org/03wmf1y16","country_code":"US","type":"education","lineage":["https://openalex.org/I51713134"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Christian Mosimann","raw_affiliation_strings":["Section of Developmental Biology, Department of Pediatrics, University of Colorado Anschutz Medical Campus, Aurora, CO, USA"],"raw_orcid":"https://orcid.org/0000-0002-0749-2576","affiliations":[{"raw_affiliation_string":"Section of Developmental Biology, Department of Pediatrics, University of Colorado Anschutz Medical Campus, Aurora, CO, USA","institution_ids":["https://openalex.org/I51713134"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5054781141","display_name":"Zbyn\u011bk Kozm\u00edk","orcid":"https://orcid.org/0000-0002-5850-2105","observed_orcids":["https://orcid.org/0000-0002-5850-2105","https://orcid.org/0000-0002-7861-9802"]},"institutions":[{"id":"https://openalex.org/I4210138103","display_name":"Czech Academy of Sciences, Institute of Molecular Genetics","ror":"https://ror.org/045syc608","country_code":"CZ","type":"facility","lineage":["https://openalex.org/I202391551","https://openalex.org/I4210138103"]}],"countries":["CZ"],"is_corresponding":true,"raw_author_name":"Zbynek Kozmik","raw_affiliation_strings":["Institute of Molecular Genetics of the ASCR, v. v. i., Prague, Czech Republic. zbynek.kozmik@img.cas.cz","Institute of Molecular Genetics of the ASCR, v. v. i., Prague, Czech Republic"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Molecular Genetics of the ASCR, v. v. i., Prague, Czech Republic. zbynek.kozmik@img.cas.cz","institution_ids":["https://openalex.org/I4210138103"]},{"raw_affiliation_string":"Institute of Molecular Genetics of the ASCR, v. v. i., Prague, Czech Republic","institution_ids":["https://openalex.org/I4210138103"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5078891718","display_name":"Alexa Burger","orcid":"https://orcid.org/0000-0001-7137-3910","observed_orcids":["https://orcid.org/0000-0001-7137-3910"]},"institutions":[{"id":"https://openalex.org/I51713134","display_name":"University of Colorado Anschutz","ror":"https://ror.org/03wmf1y16","country_code":"US","type":"education","lineage":["https://openalex.org/I51713134"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Alexa Burger","raw_affiliation_strings":["Section of Developmental Biology, Department of Pediatrics, University of Colorado Anschutz Medical Campus, Aurora, CO, USA. alexa.burger@cuanschutz.edu","Section of Developmental Biology, Department of Pediatrics, University of Colorado Anschutz Medical Campus, Aurora, CO, USA"],"raw_orcid":"https://orcid.org/0000-0001-7137-3910","affiliations":[{"raw_affiliation_string":"Section of Developmental Biology, Department of Pediatrics, University of Colorado Anschutz Medical Campus, Aurora, CO, USA. alexa.burger@cuanschutz.edu","institution_ids":["https://openalex.org/I51713134"]},{"raw_affiliation_string":"Section of Developmental Biology, Department of Pediatrics, University of Colorado Anschutz Medical Campus, Aurora, CO, USA","institution_ids":["https://openalex.org/I51713134"]}]}],"institutions":[],"countries_distinct_count":4,"institutions_distinct_count":17,"corresponding_author_ids":["https://openalex.org/A5054781141","https://openalex.org/A5078891718"],"corresponding_institution_ids":["https://openalex.org/I4210138103","https://openalex.org/I51713134"],"apc_list":{"value":6290,"currency":"USD","value_usd":6290},"apc_paid":{"value":6290,"currency":"USD","value_usd":6290},"fwci":1.3363,"has_fulltext":true,"cited_by_count":19,"citation_normalized_percentile":{"value":0.78928582,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":88,"max":99},"biblio":{"volume":"14","issue":"1","first_page":"6594","last_page":"6594"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10268","display_name":"Developmental Biology and Gene Regulation","score":0.9911999702453613,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10268","display_name":"Developmental Biology and Gene Regulation","score":0.9911999702453613,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10222","display_name":"Genomics and Chromatin Dynamics","score":0.00839999970048666,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10929","display_name":"Wnt/\u03b2-catenin signaling in development and cancer","score":0.0,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/brachyury","display_name":"Brachyury","score":0.9589999914169312},{"id":"https://openalex.org/keywords/notochord","display_name":"notochord","score":0.8799999952316284},{"id":"https://openalex.org/keywords/enhancers","display_name":"enhancers","score":0.8399999737739563},{"id":"https://openalex.org/keywords/transcription-factor-regulation","display_name":"transcription factor regulation","score":0.5899999737739563},{"id":"https://openalex.org/keywords/cis-regulatory-elements","display_name":"cis-regulatory elements","score":0.6650000214576721},{"id":"https://openalex.org/keywords/neural-tube-defects","display_name":"neural tube defects","score":0.6899999976158142},{"id":"https://openalex.org/keywords/vertebrate-evolution","display_name":"vertebrate evolution","score":0.6840000152587891},{"id":"https://openalex.org/keywords/marsupials","display_name":"marsupials","score":0.5400000214576721},{"id":"https://openalex.org/keywords/zebrafish","display_name":"zebrafish","score":0.8999999761581421},{"id":"https://openalex.org/keywords/axolotl","display_name":"axolotl","score":0.9729999899864197},{"id":"https://openalex.org/keywords/mice","display_name":"mice","score":0.6399999856948853},{"id":"https://openalex.org/keywords/gastrulation","display_name":"gastrulation","score":0.5260000228881836}],"concepts":[{"id":"https://openalex.org/C46122727","wikidata":"https://www.wikidata.org/wiki/Q14885879","display_name":"Brachyury","level":5,"score":0.994331955909729},{"id":"https://openalex.org/C2776133846","wikidata":"https://www.wikidata.org/wiki/Q243469","display_name":"Notochord","level":4,"score":0.9667208790779114},{"id":"https://openalex.org/C111936080","wikidata":"https://www.wikidata.org/wiki/Q913367","display_name":"Enhancer","level":4,"score":0.8272417783737183},{"id":"https://openalex.org/C2777738586","wikidata":"https://www.wikidata.org/wiki/Q5173","display_name":"Bilateria","level":4,"score":0.8211416602134705},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.7335797548294067},{"id":"https://openalex.org/C2776878037","wikidata":"https://www.wikidata.org/wiki/Q169444","display_name":"Zebrafish","level":3,"score":0.7238308191299438},{"id":"https://openalex.org/C129536746","wikidata":"https://www.wikidata.org/wiki/Q1141026","display_name":"Gastrulation","level":4,"score":0.684012770652771},{"id":"https://openalex.org/C2778961482","wikidata":"https://www.wikidata.org/wiki/Q25241","display_name":"Vertebrate","level":3,"score":0.601202130317688},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.5292068123817444},{"id":"https://openalex.org/C2778712684","wikidata":"https://www.wikidata.org/wiki/Q10915","display_name":"Chordate","level":4,"score":0.507710337638855},{"id":"https://openalex.org/C86339819","wikidata":"https://www.wikidata.org/wiki/Q407384","display_name":"Transcription factor","level":3,"score":0.4170389175415039},{"id":"https://openalex.org/C95444343","wikidata":"https://www.wikidata.org/wiki/Q7141","display_name":"Cell biology","level":1,"score":0.4028157591819763},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.28998297452926636},{"id":"https://openalex.org/C145103041","wikidata":"https://www.wikidata.org/wiki/Q1151519","display_name":"Embryonic stem cell","level":3,"score":0.23570439219474792},{"id":"https://openalex.org/C90132467","wikidata":"https://www.wikidata.org/wiki/Q171184","display_name":"Phylogenetics","level":3,"score":0.21037790179252625},{"id":"https://openalex.org/C2780915607","wikidata":"https://www.wikidata.org/wiki/Q323438","display_name":"Mesoderm","level":4,"score":0.20028474926948547},{"id":"https://openalex.org/C87073359","wikidata":"https://www.wikidata.org/wiki/Q33196","display_name":"Embryogenesis","level":3,"score":0.12153998017311096}],"mesh":[{"descriptor_ui":"D000098908","descriptor_name":"Brachyury Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005326","descriptor_name":"Fetal Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D005326","descriptor_name":"Fetal Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008322","descriptor_name":"Mammals","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D009672","descriptor_name":"Notochord","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D015027","descriptor_name":"Zebrafish","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D015027","descriptor_name":"Zebrafish","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D018507","descriptor_name":"Gene Expression Regulation, Developmental","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020825","descriptor_name":"T-Box Domain Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D020825","descriptor_name":"T-Box Domain Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":14,"locations":[{"id":"doi:10.1038/s41467-023-42151-3","doi":"https://doi.org/10.1038/s41467-023-42151-3","is_oa":true,"landing_page_url":"https://doi.org/10.1038/s41467-023-42151-3","pdf_url":null,"source":{"id":"https://openalex.org/S64187185","display_name":"Nature Communications","issn_l":"2041-1723","issn":["2041-1723"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["anvur-class-a","anvur-scientific","cwts-core","doaj","dongbi-a","doyens","jufo-3","ki-jl-3","medline","norway-2","oarl","poland-200","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310319908","host_organization_name":"Nature Portfolio","host_organization_lineage":["https://openalex.org/P4310319908","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Nature Portfolio","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nature Communications","raw_type":"journal-article"},{"id":"doi:10.1101/2023.04.20.536761","doi":"https://doi.org/10.1101/2023.04.20.536761","is_oa":true,"landing_page_url":"https://doi.org/10.1101/2023.04.20.536761","pdf_url":"https://www.biorxiv.org/content/biorxiv/early/2023/04/20/2023.04.20.536761.full.pdf","source":{"id":"https://openalex.org/S4306402567","display_name":"bioRxiv (Cold Spring Harbor Laboratory)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I2750212522","host_organization_name":"Cold Spring Harbor Laboratory","host_organization_lineage":["https://openalex.org/I2750212522"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"bioRxiv","raw_type":"posted-content"},{"id":"pmh:oai:pubmedcentral.nih.gov:10584899","doi":null,"is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/10584899","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC10584899/pdf/41467_2023_Article_42151.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nat Commun","raw_type":"Text"},{"id":"pmid:37131681","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/37131681","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"bioRxiv : the preprint server for biology","raw_type":"Preprint"},{"id":"pmid:37852970","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/37852970","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nature communications","raw_type":"Journal Article"},{"id":"pmh:oai:escholarship.org:ark:/13030/qt9jc2r2pk","doi":null,"is_oa":true,"landing_page_url":"https://escholarship.org/uc/item/9jc2r2pk","pdf_url":"https://escholarship.org/content/qt9jc2r2pk/qt9jc2r2pk.pdf?t=s3qzcy","source":{"id":"https://openalex.org/S4306400115","display_name":"eScholarship (California Digital Library)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I2801248553","host_organization_name":"California Digital Library","host_organization_lineage":["https://openalex.org/I2801248553"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Nature Communications, vol 14, iss 1","raw_type":"article"},{"id":"pmh:oai:osti.gov:2470993","doi":null,"is_oa":true,"landing_page_url":"https://www.osti.gov/biblio/2470993","pdf_url":"https://www.osti.gov/servlets/purl/2470993","source":{"id":"https://openalex.org/S4306402487","display_name":"OSTI OAI (U.S. Department of Energy Office of Scientific and Technical Information)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I139351228","host_organization_name":"Office of Scientific and Technical Information","host_organization_lineage":["https://openalex.org/I139351228"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:10153258","doi":null,"is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/10153258","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"bioRxiv","raw_type":"Text"},{"id":"pmh:doi:10.48350/187295","doi":null,"is_oa":false,"landing_page_url":"https://boris-portal.unibe.ch/handle/20.500.12422/170755","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"JournalArticle"},{"id":"pmh:oai:RePEc:nat:natcom:v:14:y:2023:i:1:d:10.1038_s41467-023-42151-3","doi":null,"is_oa":false,"landing_page_url":"https://www.nature.com/articles/s41467-023-42151-3","pdf_url":null,"source":{"id":"https://openalex.org/S4306401271","display_name":"RePEc: Research Papers in Economics","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I77793887","host_organization_name":"Federal Reserve Bank of St. Louis","host_organization_lineage":["https://openalex.org/I77793887"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"article"},{"id":"pmh:oai:boris.unibe.ch:187295","doi":null,"is_oa":true,"landing_page_url":"https://boris.unibe.ch/187295/","pdf_url":null,"source":{"id":"https://openalex.org/S4306401086","display_name":"Bern Open Repository and Information System (University of Bern)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I118564535","host_organization_name":"University of Bern","host_organization_lineage":["https://openalex.org/I118564535"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:doaj.org/article:8918433ad9dc464ebd1fe886936070f5","doi":null,"is_oa":true,"landing_page_url":"https://doaj.org/article/8918433ad9dc464ebd1fe886936070f5","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Nature Communications, Vol 14, Iss 1, Pp 1-18 (2023)","raw_type":"article"},{"id":"pmh:oai:escholarship.org:ark:/13030/qt4g09r0kb","doi":null,"is_oa":true,"landing_page_url":"https://escholarship.org/uc/item/4g09r0kb","pdf_url":null,"source":{"id":"https://openalex.org/S4306400115","display_name":"eScholarship (California Digital Library)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I2801248553","host_organization_name":"California Digital Library","host_organization_lineage":["https://openalex.org/I2801248553"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"bioRxiv, vol 4, iss 05-02","raw_type":"article"},{"id":"doi:10.48350/187295","doi":"https://doi.org/10.48350/187295","is_oa":true,"landing_page_url":"https://doi.org/10.48350/187295","pdf_url":null,"source":{"id":"https://openalex.org/S7407053152","display_name":"Open Access CRIS of the University of Bern","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"JournalArticle"}],"best_oa_location":{"id":"doi:10.1038/s41467-023-42151-3","doi":"https://doi.org/10.1038/s41467-023-42151-3","is_oa":true,"landing_page_url":"https://doi.org/10.1038/s41467-023-42151-3","pdf_url":null,"source":{"id":"https://openalex.org/S64187185","display_name":"Nature Communications","issn_l":"2041-1723","issn":["2041-1723"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["anvur-class-a","anvur-scientific","cwts-core","doaj","dongbi-a","doyens","jufo-3","ki-jl-3","medline","norway-2","oarl","poland-200","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310319908","host_organization_name":"Nature Portfolio","host_organization_lineage":["https://openalex.org/P4310319908","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Nature Portfolio","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nature Communications","raw_type":"journal-article"},"sustainable_development_goals":[],"study_designs":[],"awards":[{"id":"https://openalex.org/G1725164653","display_name":"Regulatory dynamics of heart formation and in vivo cardiac reprogramming","funder_award_id":"186993","funder_id":"https://openalex.org/F4320320924","funder_display_name":"Schweizerischer Nationalfonds zur F\u00f6rderung der Wissenschaftlichen Forschung"},{"id":"https://openalex.org/G1760975967","display_name":null,"funder_award_id":"3T32GM121742-02S1","funder_id":"https://openalex.org/F4320337354","funder_display_name":"National Institute of General Medical Sciences"},{"id":"https://openalex.org/G1794731937","display_name":null,"funder_award_id":"1R01DK129350-01A1","funder_id":"https://openalex.org/F4320306085","funder_display_name":"U.S. Department of Health and Human Services"},{"id":"https://openalex.org/G2469247777","display_name":"Zellul\u00e4re und molekulare Grundlagen der\u200b de novo Regeneration des Thymus","funder_award_id":"450807335","funder_id":"https://openalex.org/F4320320879","funder_display_name":"Deutsche Forschungsgemeinschaft"},{"id":"https://openalex.org/G2784031255","display_name":null,"funder_award_id":"CZ.1.05/1.1.00/02.0109","funder_id":"https://openalex.org/F4320321006","funder_display_name":"Grantov\u00e1 Agentura \u010cesk\u00e9 Republiky"},{"id":"https://openalex.org/G3100812835","display_name":"EDGE FGT: Functional Genomics in Gar - Discovery Tools for Major Vertebrate Transitions","funder_award_id":"2029216","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G3257704058","display_name":null,"funder_award_id":"SVRF2021-1048003","funder_id":"https://openalex.org/F4320319761","funder_display_name":"Additional Ventures"},{"id":"https://openalex.org/G3944189357","display_name":"A Single-Cell Resolution Enhancer Atlas of Craniofacial Development","funder_award_id":"R01DE028599","funder_id":"https://openalex.org/F4320337365","funder_display_name":"National Institute of Dental and Craniofacial Research"},{"id":"https://openalex.org/G4841770953","display_name":"Deciphering the regulatory principles governing enhancer specificity","funder_award_id":"DP2HG010013","funder_id":"https://openalex.org/F4320337348","funder_display_name":"National Human Genome Research Institute"},{"id":"https://openalex.org/G5743978726","display_name":"Investigating the regulation of chromatin associated proteins by intrinsically disordered regions","funder_award_id":"2203311","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G6597117708","display_name":"Chemical modulation of bromodomain function in development and disease","funder_award_id":"180345","funder_id":"https://openalex.org/F4320320924","funder_display_name":"Schweizerischer Nationalfonds zur F\u00f6rderung der Wissenschaftlichen Forschung"},{"id":"https://openalex.org/G660440469","display_name":null,"funder_award_id":"CZ.1.05/1.1.00/02.0109","funder_id":"https://openalex.org/F4320320879","funder_display_name":"Deutsche Forschungsgemeinschaft"},{"id":"https://openalex.org/G6668512820","display_name":"Defining the developmental mechanisms of pericardium formation","funder_award_id":"F31HL167580","funder_id":"https://openalex.org/F4320337338","funder_display_name":"National Heart, Lung, and Blood Institute"},{"id":"https://openalex.org/G6701738673","display_name":"Wechselspiel zwischen Regeneration und Alterung beim Axolotl, einer Art mit vernachl\u00e4ssigbarer Seneszenz","funder_award_id":"497658823","funder_id":"https://openalex.org/F4320320879","funder_display_name":"Deutsche Forschungsgemeinschaft"},{"id":"https://openalex.org/G7894656854","display_name":"FZT 111: Zentrum f\u00fcr Regenerative Therapien Dresden (CRTD)","funder_award_id":"22137416","funder_id":"https://openalex.org/F4320320879","funder_display_name":"Deutsche Forschungsgemeinschaft"},{"id":"https://openalex.org/G9000882884","display_name":"In vivo Characterization of Regulatory Variant Pathogenicity in Congenital Heart Disease","funder_award_id":"R01HL162304","funder_id":"https://openalex.org/F4320337338","funder_display_name":"National Heart, Lung, and Blood Institute"},{"id":"https://openalex.org/G9000893671","display_name":"Pbx-Directed Control of Cellular Behaviors that Drive Midface Morphogenesis","funder_award_id":"R01DE024745","funder_id":"https://openalex.org/F4320337365","funder_display_name":"National Institute of Dental and Craniofacial Research"},{"id":"https://openalex.org/G9000901250","display_name":"Predoctoral Training in the Genetics of Development, Disease and Regeneration","funder_award_id":"T32GM141742","funder_id":"https://openalex.org/F4320337354","funder_display_name":"National Institute of General Medical Sciences"},{"id":"https://openalex.org/G9000911607","display_name":"Functionally Assessing Transcriptional Enhancers In Vivo","funder_award_id":"R01HG003988","funder_id":"https://openalex.org/F4320337348","funder_display_name":"National Human Genome Research Institute"},{"id":"https://openalex.org/G961758034","display_name":"Developmental causes of syndromic Thrombocytopenia and co-morbidities","funder_award_id":"R01DK129350","funder_id":"https://openalex.org/F4320337357","funder_display_name":"National Institute of Diabetes and Digestive and Kidney Diseases"}],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"},{"id":"https://openalex.org/F4320306085","display_name":"U.S. Department of Health and Human Services","ror":"https://ror.org/033jnv181"},{"id":"https://openalex.org/F4320309583","display_name":"Children's Hospital Colorado","ror":"https://ror.org/00mj9k629"},{"id":"https://openalex.org/F4320319761","display_name":"Additional Ventures","ror":"https://ror.org/01jmvv781"},{"id":"https://openalex.org/F4320320879","display_name":"Deutsche Forschungsgemeinschaft","ror":"https://ror.org/018mejw64"},{"id":"https://openalex.org/F4320320924","display_name":"Schweizerischer Nationalfonds zur F\u00f6rderung der Wissenschaftlichen Forschung","ror":"https://ror.org/00yjd3n13"},{"id":"https://openalex.org/F4320321006","display_name":"Grantov\u00e1 Agentura \u010cesk\u00e9 Republiky","ror":"https://ror.org/01pv73b02"},{"id":"https://openalex.org/F4320321613","display_name":"Technische Universit\u00e4t Dresden","ror":"https://ror.org/042aqky30"},{"id":"https://openalex.org/F4320324476","display_name":"Zentrum f\u00fcr Regenerative Therapien Dresden","ror":"https://ror.org/042aqky30"},{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320333634","display_name":"Anschutz Medical Campus, University of Colorado","ror":"https://ror.org/03wmf1y16"},{"id":"https://openalex.org/F4320337338","display_name":"National Heart, Lung, and Blood Institute","ror":"https://ror.org/012pb6c26"},{"id":"https://openalex.org/F4320337348","display_name":"National Human Genome Research Institute","ror":"https://ror.org/00baak391"},{"id":"https://openalex.org/F4320337354","display_name":"National Institute of General Medical Sciences","ror":"https://ror.org/04q48ey07"},{"id":"https://openalex.org/F4320337357","display_name":"National Institute of Diabetes and Digestive and Kidney Diseases","ror":"https://ror.org/00adh9b73"},{"id":"https://openalex.org/F4320337365","display_name":"National Institute of Dental and Craniofacial Research","ror":"https://ror.org/004a2wv92"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4387737539.pdf","grobid_xml":"https://content.openalex.org/works/W4387737539.grobid-xml"},"referenced_works_count":113,"referenced_works":["https://openalex.org/W103593936","https://openalex.org/W118013854","https://openalex.org/W209659943","https://openalex.org/W241315913","https://openalex.org/W1503533733","https://openalex.org/W1901203685","https://openalex.org/W1920770960","https://openalex.org/W1963630241","https://openalex.org/W1964795153","https://openalex.org/W1967187300","https://openalex.org/W1975382013","https://openalex.org/W1982267895","https://openalex.org/W1987833442","https://openalex.org/W1989388378","https://openalex.org/W1991615568","https://openalex.org/W1995714143","https://openalex.org/W1995762311","https://openalex.org/W2001220605","https://openalex.org/W2002718898","https://openalex.org/W2006824094","https://openalex.org/W2008758954","https://openalex.org/W2009096862","https://openalex.org/W2011515619","https://openalex.org/W2025741801","https://openalex.org/W2025853097","https://openalex.org/W2027554521","https://openalex.org/W2027857819","https://openalex.org/W2029252550","https://openalex.org/W2030390431","https://openalex.org/W2031325912","https://openalex.org/W2032344982","https://openalex.org/W2035178674","https://openalex.org/W2044779230","https://openalex.org/W2046760010","https://openalex.org/W2055847955","https://openalex.org/W2065105749","https://openalex.org/W2067901284","https://openalex.org/W2070353993","https://openalex.org/W2070395066","https://openalex.org/W2075359789","https://openalex.org/W2077480850","https://openalex.org/W2083289888","https://openalex.org/W2085295733","https://openalex.org/W2088560595","https://openalex.org/W2089000296","https://openalex.org/W2102171639","https://openalex.org/W2102186324","https://openalex.org/W2102681982","https://openalex.org/W2104065792","https://openalex.org/W2105449447","https://openalex.org/W2108968666","https://openalex.org/W2113102609","https://openalex.org/W2117669477","https://openalex.org/W2122968962","https://openalex.org/W2123092799","https://openalex.org/W2135447402","https://openalex.org/W2138708491","https://openalex.org/W2140952049","https://openalex.org/W2149327445","https://openalex.org/W2158486555","https://openalex.org/W2161533644","https://openalex.org/W2163471135","https://openalex.org/W2164207497","https://openalex.org/W2169049403","https://openalex.org/W2181933303","https://openalex.org/W2194390873","https://openalex.org/W2296098063","https://openalex.org/W2296550515","https://openalex.org/W2307880694","https://openalex.org/W2308616703","https://openalex.org/W2345943684","https://openalex.org/W2429126092","https://openalex.org/W2560810409","https://openalex.org/W2580767461","https://openalex.org/W2586637063","https://openalex.org/W2600090860","https://openalex.org/W2604308930","https://openalex.org/W2604852629","https://openalex.org/W2609873084","https://openalex.org/W2747297590","https://openalex.org/W2750682736","https://openalex.org/W2760852017","https://openalex.org/W2769712315","https://openalex.org/W2784936077","https://openalex.org/W2786174959","https://openalex.org/W2792254596","https://openalex.org/W2808760278","https://openalex.org/W2809646190","https://openalex.org/W2909188408","https://openalex.org/W2952808666","https://openalex.org/W2970016695","https://openalex.org/W2990122700","https://openalex.org/W3007402690","https://openalex.org/W3008214033","https://openalex.org/W3012001726","https://openalex.org/W3035090529","https://openalex.org/W3044799576","https://openalex.org/W3045910546","https://openalex.org/W3092102965","https://openalex.org/W3110953611","https://openalex.org/W3119327744","https://openalex.org/W3165226791","https://openalex.org/W3172305265","https://openalex.org/W3198242174","https://openalex.org/W3215596355","https://openalex.org/W3217699142","https://openalex.org/W4200103838","https://openalex.org/W4210966658","https://openalex.org/W4293873596","https://openalex.org/W4295671557","https://openalex.org/W4307843054","https://openalex.org/W4361190816","https://openalex.org/W4405514972"],"related_works":["https://openalex.org/W4366550858","https://openalex.org/W3217699142","https://openalex.org/W4387948942","https://openalex.org/W4381856663","https://openalex.org/W2886730726","https://openalex.org/W4405366982","https://openalex.org/W6887607556","https://openalex.org/W4412695611","https://openalex.org/W4394578954","https://openalex.org/W2098957345"],"abstract_inverted_index":{"The":[0,112],"cell":[1],"type-specific":[2],"expression":[3,30,95,147],"of":[4,45,87,125,135],"key":[5],"transcription":[6,18],"factors":[7],"is":[8,15,31],"central":[9],"to":[10,130],"development":[11],"and":[12,24,59,70,75,103,155],"disease.":[13],"Brachyury/T/TBXT":[14,51],"a":[16],"major":[17],"factor":[19],"for":[20,144,160],"gastrulation,":[21],"tailbud":[22,110],"patterning,":[23],"notochord":[25,36,66,115,146],"formation;":[26],"however,":[27],"how":[28],"its":[29],"controlled":[32],"in":[33,48,56,72,84,91,97,121],"the":[34,43,49,98,122,131,141],"mammalian":[35,50],"has":[37],"remained":[38],"elusive.":[39],"Here,":[40],"we":[41,61],"identify":[42],"complement":[44],"notochord-specific":[46],"enhancers":[47,90,116,143],"gene.":[52],"Using":[53],"transgenic":[54],"assays":[55],"zebrafish,":[57],"axolotl,":[58],"mouse,":[60,74],"discover":[62],"three":[63,89,113],"conserved":[64,118],"Brachyury-controlling":[65],"enhancers,":[67,83],"T3,":[68],"C,":[69],"I,":[71],"human,":[73],"marsupial":[76],"genomes.":[77],"Acting":[78],"as":[79,157],"Brachyury-responsive,":[80],"auto-regulatory":[81,150],"shadow":[82],"cis":[85],"deletion":[86],"all":[88],"mouse":[92],"abolishes":[93],"Brachyury/T/Tbxt":[94],"selectively":[96],"notochord,":[99],"causing":[100],"specific":[101],"trunk":[102],"neural":[104],"tube":[105],"defects":[106],"without":[107],"gastrulation":[108],"or":[109],"defects.":[111],"Brachyury-driving":[114],"are":[117],"beyond":[119],"mammals":[120],"brachyury/tbxtb":[123],"loci":[124],"fishes,":[126],"dating":[127],"their":[128],"origin":[129],"last":[132],"common":[133],"ancestor":[134],"jawed":[136],"vertebrates.":[137],"Our":[138],"data":[139],"define":[140],"vertebrate":[142],"Brachyury/T/TBXTB":[145],"through":[148],"an":[149],"mechanism":[151],"that":[152],"conveys":[153],"robustness":[154],"adaptability":[156],"ancient":[158],"basis":[159],"axis":[161],"development.":[162]},"counts_by_year":[{"year":2026,"cited_by_count":6},{"year":2025,"cited_by_count":7},{"year":2024,"cited_by_count":3},{"year":2023,"cited_by_count":2},{"year":2022,"cited_by_count":1}],"updated_date":"2026-11-12T12:28:57.059296","created_date":"2023-10-19T00:00:00"}
