{"id":"https://openalex.org/W4387045237","doi":"https://doi.org/10.1261/rna.079633.123","title":"Znf598-mediated Rps10/eS10 ubiquitination contributes to the ribosome ubiquitination dynamics during zebrafish development","display_name":"Znf598-mediated Rps10/eS10 ubiquitination contributes to the ribosome ubiquitination dynamics during zebrafish development","publication_year":2023,"publication_date":"2023-09-26","ids":{"openalex":"https://openalex.org/W4387045237","doi":"https://doi.org/10.1261/rna.079633.123","pmid":"https://pubmed.ncbi.nlm.nih.gov/37751929","pmcid":"https://www.ncbi.nlm.nih.gov/pmc/articles/10653392"},"language":"en","primary_location":{"id":"doi:10.1261/rna.079633.123","doi":"https://doi.org/10.1261/rna.079633.123","is_oa":true,"landing_page_url":"https://doi.org/10.1261/rna.079633.123","pdf_url":"http://rnajournal.cshlp.org/content/29/12/1910.full.pdf","source":{"id":"https://openalex.org/S187657468","display_name":"RNA","issn_l":"1355-8382","issn":["1355-8382","1469-9001"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["cwts-core","dongbi-b","doyens","jufo-2","ki-jl-2","medline","norway-2","poland-140","russia-white-list-1"],"host_organization":"https://openalex.org/P4310315909","host_organization_name":"Cold Spring Harbor Laboratory Press","host_organization_lineage":["https://openalex.org/P4310315909"],"host_organization_lineage_names":["Cold Spring Harbor Laboratory Press"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"RNA","raw_type":"journal-article"},"volume":null,"type":"article","is_traditional":true,"indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"http://rnajournal.cshlp.org/content/29/12/1910.full.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5071631819","display_name":"Nozomi Ugajin","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I168356945","display_name":"Kyoto Sangyo University","ror":"https://ror.org/05t70xh16","country_code":"JP","type":"education","lineage":["https://openalex.org/I168356945"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Nozomi Ugajin","raw_affiliation_strings":["Department of Frontier Life Sciences, Faculty of Life Sciences, Kyoto Sangyo University, Kita-ku, Kyoto 603-8555, Japan","1Department of Frontier Life Sciences, Faculty of Life Sciences, Kyoto Sangyo University, Kita-ku, Kyoto 603-8555, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Frontier Life Sciences, Faculty of Life Sciences, Kyoto Sangyo University, Kita-ku, Kyoto 603-8555, Japan","institution_ids":["https://openalex.org/I168356945"]},{"raw_affiliation_string":"1Department of Frontier Life Sciences, Faculty of Life Sciences, Kyoto Sangyo University, Kita-ku, Kyoto 603-8555, Japan","institution_ids":["https://openalex.org/I168356945"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5042532056","display_name":"Koshi Imami","orcid":"https://orcid.org/0000-0002-7451-4982","observed_orcids":["https://orcid.org/0000-0002-7451-4982"]},"institutions":[{"id":"https://openalex.org/I22299242","display_name":"Kyoto University","ror":"https://ror.org/02kpeqv85","country_code":"JP","type":"education","lineage":["https://openalex.org/I22299242"]},{"id":"https://openalex.org/I4210150921","display_name":"RIKEN Center for Integrative Medical Sciences","ror":"https://ror.org/04mb6s476","country_code":"JP","type":"facility","lineage":["https://openalex.org/I4210110652","https://openalex.org/I4210150921"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Koshi Imami","raw_affiliation_strings":["Graduate School of Pharmaceutical Sciences, Kyoto University, Kyoto 606- 8501, Japan","RIKEN Center for Integrative Medical Sciences, Tsurumi-ku, Yokohama, Kanagawa 230- 0045, Japan","2RIKEN Center for Integrative Medical Sciences, Tsurumi-ku, Yokohama, Kanagawa 230-0045, Japan","3Graduate School of Pharmaceutical Sciences, Kyoto University, Sakyo-ku, Kyoto 606-8501, Japan"],"raw_orcid":"https://orcid.org/0000-0002-7451-4982","affiliations":[{"raw_affiliation_string":"Graduate School of Pharmaceutical Sciences, Kyoto University, Kyoto 606- 8501, Japan","institution_ids":["https://openalex.org/I22299242"]},{"raw_affiliation_string":"RIKEN Center for Integrative Medical Sciences, Tsurumi-ku, Yokohama, Kanagawa 230- 0045, Japan","institution_ids":["https://openalex.org/I4210150921"]},{"raw_affiliation_string":"2RIKEN Center for Integrative Medical Sciences, Tsurumi-ku, Yokohama, Kanagawa 230-0045, Japan","institution_ids":["https://openalex.org/I4210150921"]},{"raw_affiliation_string":"3Graduate School of Pharmaceutical Sciences, Kyoto University, Sakyo-ku, Kyoto 606-8501, Japan","institution_ids":["https://openalex.org/I22299242"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5058784218","display_name":"Hiraku Takada","orcid":"https://orcid.org/0000-0003-2034-5666","observed_orcids":["https://orcid.org/0000-0003-2034-5666"]},"institutions":[{"id":"https://openalex.org/I168356945","display_name":"Kyoto Sangyo University","ror":"https://ror.org/05t70xh16","country_code":"JP","type":"education","lineage":["https://openalex.org/I168356945"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Hiraku Takada","raw_affiliation_strings":["Department of Frontier Life Sciences, Faculty of Life Sciences, Kyoto Sangyo University, Kita-ku, Kyoto 603-8555, Japan","1Department of Frontier Life Sciences, Faculty of Life Sciences, Kyoto Sangyo University, Kita-ku, Kyoto 603-8555, Japan"],"raw_orcid":"https://orcid.org/0000-0003-2034-5666","affiliations":[{"raw_affiliation_string":"Department of Frontier Life Sciences, Faculty of Life Sciences, Kyoto Sangyo University, Kita-ku, Kyoto 603-8555, Japan","institution_ids":["https://openalex.org/I168356945"]},{"raw_affiliation_string":"1Department of Frontier Life Sciences, Faculty of Life Sciences, Kyoto Sangyo University, Kita-ku, Kyoto 603-8555, Japan","institution_ids":["https://openalex.org/I168356945"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5001763350","display_name":"Yasushi Ishihama","orcid":"https://orcid.org/0000-0001-7714-203X","observed_orcids":["https://orcid.org/0000-0001-7714-203X"]},"institutions":[{"id":"https://openalex.org/I22299242","display_name":"Kyoto University","ror":"https://ror.org/02kpeqv85","country_code":"JP","type":"education","lineage":["https://openalex.org/I22299242"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Yasushi Ishihama","raw_affiliation_strings":["Graduate School of Pharmaceutical Sciences, Kyoto University, Kyoto 606- 8501, Japan","3Graduate School of Pharmaceutical Sciences, Kyoto University, Sakyo-ku, Kyoto 606-8501, Japan"],"raw_orcid":"https://orcid.org/0000-0001-7714-203X","affiliations":[{"raw_affiliation_string":"Graduate School of Pharmaceutical Sciences, Kyoto University, Kyoto 606- 8501, Japan","institution_ids":["https://openalex.org/I22299242"]},{"raw_affiliation_string":"3Graduate School of Pharmaceutical Sciences, Kyoto University, Sakyo-ku, Kyoto 606-8501, Japan","institution_ids":["https://openalex.org/I22299242"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5021524480","display_name":"Shinobu Chiba","orcid":"https://orcid.org/0000-0003-3485-3477","observed_orcids":["https://orcid.org/0000-0003-3485-3477"]},"institutions":[{"id":"https://openalex.org/I168356945","display_name":"Kyoto Sangyo University","ror":"https://ror.org/05t70xh16","country_code":"JP","type":"education","lineage":["https://openalex.org/I168356945"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Shinobu Chiba","raw_affiliation_strings":["Department of Frontier Life Sciences, Faculty of Life Sciences, Kyoto Sangyo University, Kita-ku, Kyoto 603-8555, Japan","1Department of Frontier Life Sciences, Faculty of Life Sciences, Kyoto Sangyo University, Kita-ku, Kyoto 603-8555, Japan"],"raw_orcid":"https://orcid.org/0000-0003-3485-3477","affiliations":[{"raw_affiliation_string":"Department of Frontier Life Sciences, Faculty of Life Sciences, Kyoto Sangyo University, Kita-ku, Kyoto 603-8555, Japan","institution_ids":["https://openalex.org/I168356945"]},{"raw_affiliation_string":"1Department of Frontier Life Sciences, Faculty of Life Sciences, Kyoto Sangyo University, Kita-ku, Kyoto 603-8555, Japan","institution_ids":["https://openalex.org/I168356945"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5052409368","display_name":"Yuichiro Mishima","orcid":"https://orcid.org/0000-0002-1075-9454","observed_orcids":["https://orcid.org/0000-0002-1075-9454"]},"institutions":[{"id":"https://openalex.org/I168356945","display_name":"Kyoto Sangyo University","ror":"https://ror.org/05t70xh16","country_code":"JP","type":"education","lineage":["https://openalex.org/I168356945"]}],"countries":["JP"],"is_corresponding":true,"raw_author_name":"Yuichiro Mishima","raw_affiliation_strings":["Department of Frontier Life Sciences, Faculty of Life Sciences, Kyoto Sangyo University, Kita-ku, Kyoto 603-8555, Japan","1Department of Frontier Life Sciences, Faculty of Life Sciences, Kyoto Sangyo University, Kita-ku, Kyoto 603-8555, Japan"],"raw_orcid":"https://orcid.org/0000-0002-1075-9454","affiliations":[{"raw_affiliation_string":"Department of Frontier Life Sciences, Faculty of Life Sciences, Kyoto Sangyo University, Kita-ku, Kyoto 603-8555, Japan","institution_ids":["https://openalex.org/I168356945"]},{"raw_affiliation_string":"1Department of Frontier Life Sciences, Faculty of Life Sciences, Kyoto Sangyo University, Kita-ku, Kyoto 603-8555, Japan","institution_ids":["https://openalex.org/I168356945"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5052409368"],"corresponding_institution_ids":["https://openalex.org/I168356945"],"apc_list":null,"apc_paid":null,"fwci":1.0393,"has_fulltext":true,"cited_by_count":14,"citation_normalized_percentile":{"value":0.72131515,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":91,"max":98},"biblio":{"volume":"29","issue":"12","first_page":"1910","last_page":"1927"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11041","display_name":"Ubiquitin and proteasome pathways","score":0.5170999765396118,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11041","display_name":"Ubiquitin and proteasome pathways","score":0.5170999765396118,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.4587000012397766,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10222","display_name":"Genomics and Chromatin Dynamics","score":0.002300000051036477,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/znf598","display_name":"ZNF598","score":0.9449999928474426},{"id":"https://openalex.org/keywords/e3-ubiquitin-ligase","display_name":"E3 ubiquitin ligase","score":0.9589999914169312},{"id":"https://openalex.org/keywords/ribosome-associated-quality-control","display_name":"ribosome-associated quality control","score":0.9520000219345093},{"id":"https://openalex.org/keywords/ribosomal-proteins","display_name":"ribosomal proteins","score":0.8479999899864197},{"id":"https://openalex.org/keywords/zebrafish-development","display_name":"zebrafish development","score":0.8500000238418579},{"id":"https://openalex.org/keywords/ribosome-dynamics","display_name":"ribosome dynamics","score":0.46299999952316284},{"id":"https://openalex.org/keywords/translational-control","display_name":"translational regulation","score":0.781000018119812}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.7633912563323975},{"id":"https://openalex.org/C88478588","wikidata":"https://www.wikidata.org/wiki/Q42244","display_name":"Ribosome","level":4,"score":0.743446409702301},{"id":"https://openalex.org/C25602115","wikidata":"https://www.wikidata.org/wiki/Q407111","display_name":"Ubiquitin","level":3,"score":0.7129696607589722},{"id":"https://openalex.org/C2776878037","wikidata":"https://www.wikidata.org/wiki/Q169444","display_name":"Zebrafish","level":3,"score":0.6960010528564453},{"id":"https://openalex.org/C38062823","wikidata":"https://www.wikidata.org/wiki/Q3408228","display_name":"Ribosomal protein","level":5,"score":0.6390284299850464},{"id":"https://openalex.org/C134459356","wikidata":"https://www.wikidata.org/wiki/Q4274835","display_name":"Ubiquitin ligase","level":4,"score":0.6072633862495422},{"id":"https://openalex.org/C95444343","wikidata":"https://www.wikidata.org/wiki/Q7141","display_name":"Cell biology","level":1,"score":0.5630459785461426},{"id":"https://openalex.org/C131312102","wikidata":"https://www.wikidata.org/wiki/Q5423632","display_name":"F-box protein","level":5,"score":0.5096216201782227},{"id":"https://openalex.org/C67905577","wikidata":"https://www.wikidata.org/wiki/Q215980","display_name":"Ribosomal RNA","level":3,"score":0.45326751470565796},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.2608415484428406},{"id":"https://openalex.org/C67705224","wikidata":"https://www.wikidata.org/wiki/Q11053","display_name":"RNA","level":3,"score":0.252677321434021},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.046934545040130615}],"mesh":[{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012269","descriptor_name":"Ribosomal Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D012269","descriptor_name":"Ribosomal Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D012270","descriptor_name":"Ribosomes","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D014176","descriptor_name":"Protein Biosynthesis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015027","descriptor_name":"Zebrafish","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D015027","descriptor_name":"Zebrafish","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D025801","descriptor_name":"Ubiquitin","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D029961","descriptor_name":"Zebrafish Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D029961","descriptor_name":"Zebrafish Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D044767","descriptor_name":"Ubiquitin-Protein Ligases","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D044767","descriptor_name":"Ubiquitin-Protein Ligases","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D054875","descriptor_name":"Ubiquitination","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":5,"locations":[{"id":"doi:10.1261/rna.079633.123","doi":"https://doi.org/10.1261/rna.079633.123","is_oa":true,"landing_page_url":"https://doi.org/10.1261/rna.079633.123","pdf_url":"http://rnajournal.cshlp.org/content/29/12/1910.full.pdf","source":{"id":"https://openalex.org/S187657468","display_name":"RNA","issn_l":"1355-8382","issn":["1355-8382","1469-9001"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["cwts-core","dongbi-b","doyens","jufo-2","ki-jl-2","medline","norway-2","poland-140","russia-white-list-1"],"host_organization":"https://openalex.org/P4310315909","host_organization_name":"Cold Spring Harbor Laboratory Press","host_organization_lineage":["https://openalex.org/P4310315909"],"host_organization_lineage_names":["Cold Spring Harbor Laboratory Press"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"RNA","raw_type":"journal-article"},{"id":"doi:10.1101/2023.02.12.528238","doi":"https://doi.org/10.1101/2023.02.12.528238","is_oa":true,"landing_page_url":"https://doi.org/10.1101/2023.02.12.528238","pdf_url":"https://www.biorxiv.org/content/biorxiv/early/2023/02/13/2023.02.12.528238.full.pdf","source":{"id":"https://openalex.org/S4306402567","display_name":"bioRxiv (Cold Spring Harbor Laboratory)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I2750212522","host_organization_name":"Cold Spring Harbor Laboratory","host_organization_lineage":["https://openalex.org/I2750212522"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"bioRxiv","raw_type":"posted-content"},{"id":"pmh:oai:pubmedcentral.nih.gov:10653392","doi":null,"is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/10653392","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC10653392/pdf/1910.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"RNA","raw_type":"Text"},{"id":"pmid:37751929","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/37751929","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"RNA (New York, N.Y.)","raw_type":"Journal Article"},{"id":"pmh:oai:open-archive.highwire.org:rna:29/12/1910","doi":null,"is_oa":false,"landing_page_url":"http://rnajournal.cshlp.org/cgi/content/short/29/12/1910","pdf_url":null,"source":{"id":"https://openalex.org/S4406923041","display_name":"HighWire Press Open Archive","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"TEXT"}],"best_oa_location":{"id":"doi:10.1261/rna.079633.123","doi":"https://doi.org/10.1261/rna.079633.123","is_oa":true,"landing_page_url":"https://doi.org/10.1261/rna.079633.123","pdf_url":"http://rnajournal.cshlp.org/content/29/12/1910.full.pdf","source":{"id":"https://openalex.org/S187657468","display_name":"RNA","issn_l":"1355-8382","issn":["1355-8382","1469-9001"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["cwts-core","dongbi-b","doyens","jufo-2","ki-jl-2","medline","norway-2","poland-140","russia-white-list-1"],"host_organization":"https://openalex.org/P4310315909","host_organization_name":"Cold Spring Harbor Laboratory Press","host_organization_lineage":["https://openalex.org/P4310315909"],"host_organization_lineage_names":["Cold Spring Harbor Laboratory Press"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"RNA","raw_type":"journal-article"},"sustainable_development_goals":[],"study_designs":[],"awards":[{"id":"https://openalex.org/G1364192285","display_name":"Dynamism of codon-mediated regulation of gene expression","funder_award_id":"18H02370","funder_id":"https://openalex.org/F4320334764","funder_display_name":"Japan Society for the Promotion of Science"},{"id":"https://openalex.org/G1463426655","display_name":null,"funder_award_id":"JP20gm6310017","funder_id":"https://openalex.org/F4320311405","funder_display_name":"Japan Agency for Medical Research and Development"},{"id":"https://openalex.org/G1838301330","display_name":"Large-scale proteoform analysis for unveiling the entire view","funder_award_id":"21H02459","funder_id":"https://openalex.org/F4320334764","funder_display_name":"Japan Society for the Promotion of Science"},{"id":"https://openalex.org/G3423342103","display_name":"Studies of ABC-F translation factors: from antibiotic resistance to translational control.","funder_award_id":"23K05017","funder_id":"https://openalex.org/F4320334764","funder_display_name":"Japan Society for the Promotion of Science"},{"id":"https://openalex.org/G4619669398","display_name":null,"funder_award_id":"21K06053","funder_id":"https://openalex.org/F4320334764","funder_display_name":"Japan Society for the Promotion of Science"},{"id":"https://openalex.org/G4624254123","display_name":"Dissecting the co-translational modifications by quantitative proteomics","funder_award_id":"20H03241","funder_id":"https://openalex.org/F4320334764","funder_display_name":"Japan Society for the Promotion of Science"},{"id":"https://openalex.org/G4722467670","display_name":"\u7ffb\u8a33\u7570\u5e38\u3092\u89e3\u6d88\u3059\u308b\u30ea\u30dc\u30bd\u30fc\u30e0\u54c1\u8cea\u7ba1\u7406\u6a5f\u69cb\u306e\u500b\u4f53\u5185\u30a4\u30e1\u30fc\u30b8\u30f3\u30b0","funder_award_id":"22K19300","funder_id":"https://openalex.org/F4320334764","funder_display_name":"Japan Society for the Promotion of Science"},{"id":"https://openalex.org/G5363184618","display_name":null,"funder_award_id":"20H05926","funder_id":"https://openalex.org/F4320334764","funder_display_name":"Japan Society for the Promotion of Science"},{"id":"https://openalex.org/G5440424050","display_name":null,"funder_award_id":"21H05720","funder_id":"https://openalex.org/F4320334764","funder_display_name":"Japan Society for the Promotion of Science"},{"id":"https://openalex.org/G7203320543","display_name":null,"funder_award_id":"G-2021-2-063","funder_id":"https://openalex.org/F4320310088","funder_display_name":"Institute for Fermentation, Osaka"},{"id":"https://openalex.org/G7622633956","display_name":"Tissue-specific regulation of translation initiation mediated by ribosome heterogeneity","funder_award_id":"23K23813","funder_id":"https://openalex.org/F4320334764","funder_display_name":"Japan Society for the Promotion of Science"}],"funders":[{"id":"https://openalex.org/F259686030","display_name":"Support for Pioneering Research Initiated by the Next Generation","ror":null},{"id":"https://openalex.org/F4320310088","display_name":"Institute for Fermentation, Osaka","ror":"https://ror.org/05nq89q24"},{"id":"https://openalex.org/F4320311405","display_name":"Japan Agency for Medical Research and Development","ror":"https://ror.org/004rtk039"},{"id":"https://openalex.org/F4320320912","display_name":"Ministry of Education, Culture, Sports, Science and Technology","ror":"https://ror.org/048rj2z13"},{"id":"https://openalex.org/F4320334764","display_name":"Japan Society for the Promotion of Science","ror":"https://ror.org/00hhkn466"},{"id":"https://openalex.org/F4320334789","display_name":"Japan Science and Technology Agency","ror":"https://ror.org/00097mb19"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4387045237.pdf","grobid_xml":"https://content.openalex.org/works/W4387045237.grobid-xml"},"referenced_works_count":82,"referenced_works":["https://openalex.org/W64791834","https://openalex.org/W1517086909","https://openalex.org/W1526181383","https://openalex.org/W1705731262","https://openalex.org/W1965677186","https://openalex.org/W1983859619","https://openalex.org/W1986656413","https://openalex.org/W2000789682","https://openalex.org/W2010691148","https://openalex.org/W2021263359","https://openalex.org/W2036321220","https://openalex.org/W2037786814","https://openalex.org/W2040899334","https://openalex.org/W2056032938","https://openalex.org/W2059193889","https://openalex.org/W2076358214","https://openalex.org/W2080752012","https://openalex.org/W2095848833","https://openalex.org/W2126238482","https://openalex.org/W2126602665","https://openalex.org/W2144040176","https://openalex.org/W2146152985","https://openalex.org/W2298977477","https://openalex.org/W2529755192","https://openalex.org/W2557925011","https://openalex.org/W2568866823","https://openalex.org/W2580905939","https://openalex.org/W2589978322","https://openalex.org/W2604467178","https://openalex.org/W2605873159","https://openalex.org/W2620667287","https://openalex.org/W2621126205","https://openalex.org/W2625763766","https://openalex.org/W2730564452","https://openalex.org/W2738059873","https://openalex.org/W2758757342","https://openalex.org/W2884058580","https://openalex.org/W2891583395","https://openalex.org/W2895153371","https://openalex.org/W2896740594","https://openalex.org/W2900144052","https://openalex.org/W2903508759","https://openalex.org/W2908095537","https://openalex.org/W2909869524","https://openalex.org/W2921996673","https://openalex.org/W2922547250","https://openalex.org/W2927984698","https://openalex.org/W2950681580","https://openalex.org/W2950813204","https://openalex.org/W2963893845","https://openalex.org/W2979414255","https://openalex.org/W3000190685","https://openalex.org/W3000247586","https://openalex.org/W3000377151","https://openalex.org/W3002288156","https://openalex.org/W3003678194","https://openalex.org/W3010254892","https://openalex.org/W3014161378","https://openalex.org/W3016233074","https://openalex.org/W3019427055","https://openalex.org/W3026265675","https://openalex.org/W3035939632","https://openalex.org/W3038768407","https://openalex.org/W3041421192","https://openalex.org/W3100366281","https://openalex.org/W3111841994","https://openalex.org/W3128578963","https://openalex.org/W3135663330","https://openalex.org/W3148675655","https://openalex.org/W3189320354","https://openalex.org/W3196366141","https://openalex.org/W4206648957","https://openalex.org/W4220937155","https://openalex.org/W4235129795","https://openalex.org/W4282941964","https://openalex.org/W4294026064","https://openalex.org/W4295958124","https://openalex.org/W4307445418","https://openalex.org/W4310459043","https://openalex.org/W4313479177","https://openalex.org/W4315784839","https://openalex.org/W4317390912"],"related_works":["https://openalex.org/W7144397974","https://openalex.org/W3189320354","https://openalex.org/W7029146924","https://openalex.org/W2568866823","https://openalex.org/W7070990488","https://openalex.org/W3003678194","https://openalex.org/W2769121188","https://openalex.org/W2580905939","https://openalex.org/W1526181383","https://openalex.org/W4404814273"],"abstract_inverted_index":{"The":[0],"ribosome":[1,19,39,50,73,114,162],"is":[2,21,33],"a":[3,57,62,133],"translational":[4,24],"apparatus":[5],"that":[6,18,60,95,109,123,142],"comprises":[7],"about":[8,35],"80":[9],"ribosomal":[10,64,99],"proteins":[11,100],"and":[12,26,159],"four":[13],"rRNAs.":[14],"Recent":[15],"studies":[16],"reported":[17],"ubiquitination":[20,40,51,74,97,149,163],"crucial":[22],"for":[23],"regulation":[25],"ribosome-associated":[27],"quality":[28],"control":[29],"(RQC).":[30],"However,":[31],"little":[32],"known":[34],"the":[36,96,113,147,152,157],"dynamics":[37,160],"of":[38,45,82,98,151,161],"under":[41],"complex":[42],"biological":[43],"processes":[44],"multicellular":[46],"organisms.":[47],"To":[48],"explore":[49],"during":[52,75,110,137,164],"animal":[53],"development,":[54,112],"we":[55,140],"generated":[56],"zebrafish":[58,76,87,111,165],"strain":[59],"expresses":[61],"FLAG-tagged":[63],"protein":[65,127,136],"Rpl36/eL36":[66],"from":[67,84],"its":[68],"endogenous":[69],"locus.":[70],"We":[71,106],"examined":[72],"development":[77,104],"by":[78,117],"combining":[79],"affinity":[80],"purification":[81],"ribosomes":[83],"rpl36":[85],"-FLAG":[86],"embryos":[88],"with":[89],"immunoblotting":[90],"analysis.":[91],"Our":[92],"findings":[93],"showed":[94,108,141],"dynamically":[101],"changed":[102],"as":[103],"proceeded.":[105],"also":[107],"was":[115,129],"ubiquitinated":[116,135],"Znf598,":[118],"an":[119],"E3":[120],"ubiquitin":[121],"ligase":[122],"activates":[124],"RQC.":[125],"Ribosomal":[126],"Rps10/eS10":[128,143],"found":[130],"to":[131],"be":[132],"key":[134],"development.":[138,166],"Furthermore,":[139],"ubiquitination-site":[144],"mutations":[145],"reduced":[146],"overall":[148],"pattern":[150],"ribosome.":[153],"These":[154],"results":[155],"demonstrate":[156],"complexity":[158]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":7},{"year":2024,"cited_by_count":6}],"updated_date":"2026-11-12T12:28:57.059296","created_date":"2023-09-27T00:00:00"}