{"id":"https://openalex.org/W4386885622","doi":"https://doi.org/10.1016/j.compbiolchem.2023.107961","title":"A bioinformatic analysis: Previous allergen exposure may support anti- SARS-CoV-2 immune response","display_name":"A bioinformatic analysis: Previous allergen exposure may support anti- SARS-CoV-2 immune response","publication_year":2023,"publication_date":"2023-09-20","ids":{"openalex":"https://openalex.org/W4386885622","doi":"https://doi.org/10.1016/j.compbiolchem.2023.107961","pmid":"https://pubmed.ncbi.nlm.nih.gov/37788543"},"language":"en","primary_location":{"id":"doi:10.1016/j.compbiolchem.2023.107961","doi":"https://doi.org/10.1016/j.compbiolchem.2023.107961","is_oa":false,"landing_page_url":"https://doi.org/10.1016/j.compbiolchem.2023.107961","pdf_url":null,"source":{"id":"https://openalex.org/S104924063","display_name":"Computational Biology and Chemistry","issn_l":"1476-9271","issn":["1476-9271","1476-928X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["cwts-core","dongbi-d","doyens","jufo-1","ki-jl-1","medline","norway-1","poland-70","russia-white-list-1"],"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Computational Biology and Chemistry","raw_type":"journal-article"},"volume":null,"type":"article","is_traditional":true,"indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5015421421","display_name":"I\u015f\u0131l Kutlut\u00fcrk Karag\u00f6z","orcid":"https://orcid.org/0000-0001-7367-2906","observed_orcids":["https://orcid.org/0000-0001-7367-2906"]},"institutions":[{"id":"https://openalex.org/I4101805","display_name":"Y\u0131ld\u0131z Technical University","ror":"https://ror.org/0547yzj13","country_code":"TR","type":"education","lineage":["https://openalex.org/I4101805"]},{"id":"https://openalex.org/I4210110321","display_name":"\u00dcmraniye E\u011fitim ve Ara\u015ft\u0131rma Hastanesi","ror":"https://ror.org/023wdy559","country_code":"TR","type":"healthcare","lineage":["https://openalex.org/I4210110321"]}],"countries":["TR"],"is_corresponding":true,"raw_author_name":"Is\u0131l Kutluturk Karag\u00f6z","raw_affiliation_strings":["Umraniye Trn. And Rch. Hospital, Division of Ophthalmology, Istanbul, Turkey; Y\u0131ld\u0131z Technical University, Bioengineering Department, Istanbul, Turkey. Electronic address: slkutluturk@gmail.com","Umraniye Trn. And Rch. Hospital, Division of Ophthalmology, Istanbul, Turkey","Y\u0131ld\u0131z Technical University, Bioengineering Department, Istanbul, Turkey"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Umraniye Trn. And Rch. Hospital, Division of Ophthalmology, Istanbul, Turkey; Y\u0131ld\u0131z Technical University, Bioengineering Department, Istanbul, Turkey. Electronic address: slkutluturk@gmail.com","institution_ids":["https://openalex.org/I4101805","https://openalex.org/I4210110321"]},{"raw_affiliation_string":"Umraniye Trn. And Rch. Hospital, Division of Ophthalmology, Istanbul, Turkey","institution_ids":["https://openalex.org/I4210110321"]},{"raw_affiliation_string":"Y\u0131ld\u0131z Technical University, Bioengineering Department, Istanbul, Turkey","institution_ids":["https://openalex.org/I4101805"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5027246701","display_name":"M\u00fccahit Kaya","orcid":"https://orcid.org/0000-0001-6793-536X","observed_orcids":["https://orcid.org/0000-0001-6793-536X"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Mucahit Kaya","raw_affiliation_strings":["Diagen Biotechnology, Ankara, Turkey"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Diagen Biotechnology, Ankara, Turkey","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5109787063","display_name":"Ren\u00e9 R\u00fcckert","orcid":null,"observed_orcids":[]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Ren\u00e9 R\u00fcckert","raw_affiliation_strings":["Eyegnos Consulting GmbH, Bern, Switzerland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Eyegnos Consulting GmbH, Bern, Switzerland","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5070502004","display_name":"Nazli Bozman","orcid":"https://orcid.org/0000-0001-9639-8540","observed_orcids":["https://orcid.org/0000-0001-9639-8540"]},"institutions":[{"id":"https://openalex.org/I59738393","display_name":"Gaziantep University","ror":"https://ror.org/020vvc407","country_code":"TR","type":"education","lineage":["https://openalex.org/I59738393"]}],"countries":["TR"],"is_corresponding":false,"raw_author_name":"Nazli Bozman","raw_affiliation_strings":["Gaziantep University Arts and Science Faculty Department of Biology, Gaziantep, Turkey"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Gaziantep University Arts and Science Faculty Department of Biology, Gaziantep, Turkey","institution_ids":["https://openalex.org/I59738393"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5102956104","display_name":"Vildan Kaya","orcid":"https://orcid.org/0000-0001-9035-4977","observed_orcids":["https://orcid.org/0000-0001-9035-4977"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Vildan Kaya","raw_affiliation_strings":["Medstar Antalya Hospital, Division of Radiation Oncology, Antalya, Turkey"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Medstar Antalya Hospital, Division of Radiation Oncology, Antalya, Turkey","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5067060440","display_name":"Halim Bayram","orcid":"https://orcid.org/0000-0002-0023-0645","observed_orcids":["https://orcid.org/0000-0002-0023-0645"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Halim Bayram","raw_affiliation_strings":["Dr. Ersin Arslan Trn. And Rch Hospital, Division of Infection Diseases, Gaziantep, Turkey"],"raw_orcid":"https://orcid.org/0000-0002-0023-0645","affiliations":[{"raw_affiliation_string":"Dr. Ersin Arslan Trn. And Rch Hospital, Division of Infection Diseases, Gaziantep, Turkey","institution_ids":[]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5101601946","display_name":"Mustafa Y\u0131ld\u0131r\u0131m","orcid":"https://orcid.org/0000-0001-8165-1814","observed_orcids":["https://orcid.org/0000-0001-8165-1814"]},"institutions":[{"id":"https://openalex.org/I4210135744","display_name":"Sanko University","ror":"https://ror.org/04a94ee43","country_code":"TR","type":"education","lineage":["https://openalex.org/I4210135744"]}],"countries":["TR"],"is_corresponding":false,"raw_author_name":"Mustafa Y\u0131ld\u0131r\u0131m","raw_affiliation_strings":["Sanko University, School of Medicine, Internal Diseases, Division of Oncology, Gaziantep, Turkey"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Sanko University, School of Medicine, Internal Diseases, Division of Oncology, Gaziantep, Turkey","institution_ids":["https://openalex.org/I4210135744"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5015421421"],"corresponding_institution_ids":["https://openalex.org/I4101805","https://openalex.org/I4210110321"],"apc_list":{"value":2960,"currency":"USD","value_usd":2960},"apc_paid":null,"fwci":0.0755,"has_fulltext":false,"cited_by_count":1,"citation_normalized_percentile":{"value":0.24915863,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":93},"biblio":{"volume":"107","issue":null,"first_page":"107961","last_page":"107961"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12576","display_name":"vaccines and immunoinformatics approaches","score":0.8134999871253967,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12576","display_name":"vaccines and immunoinformatics approaches","score":0.8134999871253967,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10118","display_name":"SARS-CoV-2 and COVID-19 Research","score":0.18359999358654022,"subfield":{"id":"https://openalex.org/subfields/2725","display_name":"Infectious Diseases"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T12796","display_name":"Dermatological and COVID-19 studies","score":9.999999747378752e-05,"subfield":{"id":"https://openalex.org/subfields/2708","display_name":"Dermatology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/covid-19","display_name":"COVID-19 pandemic","score":0.9089999794960022},{"id":"https://openalex.org/keywords/sars-cov-2","display_name":"SARS-CoV-2","score":0.9959999918937683},{"id":"https://openalex.org/keywords/cross-reactive-t-cells","display_name":"cross-reactive T cells","score":0.7239999771118164},{"id":"https://openalex.org/keywords/preexisting-immunity","display_name":"pre-existing immunity","score":0.5820000171661377},{"id":"https://openalex.org/keywords/allergen-epitopes","display_name":"allergen epitopes","score":0.7720000147819519},{"id":"https://openalex.org/keywords/sars-cov-2-spike-protein","display_name":"SARS-CoV-2 spike protein","score":0.8140000104904175},{"id":"https://openalex.org/keywords/mhc-class-i-epitopes","display_name":"MHC class I epitopes","score":0.8880000114440918},{"id":"https://openalex.org/keywords/mhc-class-ii-epitopes","display_name":"MHC class II epitopes","score":0.9639999866485596},{"id":"https://openalex.org/keywords/pollen-allergens","display_name":"pollen allergens","score":0.8769999742507935},{"id":"https://openalex.org/keywords/house-dust-mites","display_name":"house dust mites","score":0.9229999780654907},{"id":"https://openalex.org/keywords/wheat-allergens","display_name":"wheat allergens","score":0.6240000128746033},{"id":"https://openalex.org/keywords/hornbeam","display_name":"hornbeam","score":0.7900000214576721},{"id":"https://openalex.org/keywords/immune-response","display_name":"immune response","score":0.5370000004768372}],"concepts":[{"id":"https://openalex.org/C195616568","wikidata":"https://www.wikidata.org/wiki/Q128711","display_name":"Epitope","level":3,"score":0.9710395336151123},{"id":"https://openalex.org/C147483822","wikidata":"https://www.wikidata.org/wiki/Q103537","display_name":"Antigen","level":2,"score":0.6451058983802795},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.5834038257598877},{"id":"https://openalex.org/C203014093","wikidata":"https://www.wikidata.org/wiki/Q101929","display_name":"Immunology","level":1,"score":0.5808364748954773},{"id":"https://openalex.org/C8891405","wikidata":"https://www.wikidata.org/wiki/Q1059","display_name":"Immune system","level":2,"score":0.5688090324401855},{"id":"https://openalex.org/C2780510475","wikidata":"https://www.wikidata.org/wiki/Q186752","display_name":"Allergen","level":3,"score":0.5387059450149536},{"id":"https://openalex.org/C207936829","wikidata":"https://www.wikidata.org/wiki/Q423163","display_name":"Major histocompatibility complex","level":3,"score":0.5280659198760986},{"id":"https://openalex.org/C2777119779","wikidata":"https://www.wikidata.org/wiki/Q963278","display_name":"Molecular mimicry","level":3,"score":0.5010025501251221},{"id":"https://openalex.org/C159047783","wikidata":"https://www.wikidata.org/wiki/Q7215","display_name":"Virology","level":1,"score":0.49431300163269043},{"id":"https://openalex.org/C2522874641","wikidata":"https://www.wikidata.org/wiki/Q808","display_name":"Virus","level":2,"score":0.41527116298675537},{"id":"https://openalex.org/C207480886","wikidata":"https://www.wikidata.org/wiki/Q42982","display_name":"Allergy","level":2,"score":0.3360958695411682}],"mesh":[{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000086402","descriptor_name":"SARS-CoV-2","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000485","descriptor_name":"Allergens","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007109","descriptor_name":"Immunity","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018984","descriptor_name":"Epitopes, T-Lymphocyte","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":2,"locations":[{"id":"doi:10.1016/j.compbiolchem.2023.107961","doi":"https://doi.org/10.1016/j.compbiolchem.2023.107961","is_oa":false,"landing_page_url":"https://doi.org/10.1016/j.compbiolchem.2023.107961","pdf_url":null,"source":{"id":"https://openalex.org/S104924063","display_name":"Computational Biology and Chemistry","issn_l":"1476-9271","issn":["1476-9271","1476-928X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["cwts-core","dongbi-d","doyens","jufo-1","ki-jl-1","medline","norway-1","poland-70","russia-white-list-1"],"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Computational Biology and Chemistry","raw_type":"journal-article"},{"id":"pmid:37788543","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/37788543","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Computational biology and chemistry","raw_type":"Journal Article"}],"best_oa_location":null,"sustainable_development_goals":[{"display_name":"Good health and well-being","id":"https://metadata.un.org/sdg/3","score":0.9537000060081482}],"study_designs":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":96,"referenced_works":["https://openalex.org/W1503928854","https://openalex.org/W1581000856","https://openalex.org/W1603763228","https://openalex.org/W1976985910","https://openalex.org/W2012625502","https://openalex.org/W2020564539","https://openalex.org/W2047773273","https://openalex.org/W2053707749","https://openalex.org/W2059646198","https://openalex.org/W2060109277","https://openalex.org/W2069807065","https://openalex.org/W2074259682","https://openalex.org/W2075878132","https://openalex.org/W2076787873","https://openalex.org/W2104962128","https://openalex.org/W2112874093","https://openalex.org/W2114533414","https://openalex.org/W2117333383","https://openalex.org/W2118943119","https://openalex.org/W2120399005","https://openalex.org/W2120467372","https://openalex.org/W2121169858","https://openalex.org/W2125732073","https://openalex.org/W2127635589","https://openalex.org/W2132116179","https://openalex.org/W2142774061","https://openalex.org/W2151932306","https://openalex.org/W2160215386","https://openalex.org/W2163632492","https://openalex.org/W2168518560","https://openalex.org/W2588895177","https://openalex.org/W2768089064","https://openalex.org/W2884557428","https://openalex.org/W2922503279","https://openalex.org/W2997888749","https://openalex.org/W2999409984","https://openalex.org/W3001118548","https://openalex.org/W3002108456","https://openalex.org/W3004280078","https://openalex.org/W3007814559","https://openalex.org/W3008905334","https://openalex.org/W3010699833","https://openalex.org/W3012764845","https://openalex.org/W3014275885","https://openalex.org/W3014916488","https://openalex.org/W3015553111","https://openalex.org/W3015696390","https://openalex.org/W3015861468","https://openalex.org/W3016897056","https://openalex.org/W3020781652","https://openalex.org/W3022325117","https://openalex.org/W3024012792","https://openalex.org/W3025320502","https://openalex.org/W3032543466","https://openalex.org/W3032838347","https://openalex.org/W3035033705","https://openalex.org/W3038202667","https://openalex.org/W3042183476","https://openalex.org/W3042965382","https://openalex.org/W3043083362","https://openalex.org/W3043502363","https://openalex.org/W3045971896","https://openalex.org/W3046259209","https://openalex.org/W3049605393","https://openalex.org/W3080190395","https://openalex.org/W3082329198","https://openalex.org/W3084914618","https://openalex.org/W3087030846","https://openalex.org/W3087755171","https://openalex.org/W3088314701","https://openalex.org/W3089547000","https://openalex.org/W3091888222","https://openalex.org/W3093257568","https://openalex.org/W3095024243","https://openalex.org/W3097687963","https://openalex.org/W3098914336","https://openalex.org/W3099454912","https://openalex.org/W3110755304","https://openalex.org/W3116572094","https://openalex.org/W3124723903","https://openalex.org/W3133229618","https://openalex.org/W3157404991","https://openalex.org/W3157757268","https://openalex.org/W3163304692","https://openalex.org/W3172475512","https://openalex.org/W3178283049","https://openalex.org/W3197882125","https://openalex.org/W3213348312","https://openalex.org/W4225383480","https://openalex.org/W4226082485","https://openalex.org/W4296577793","https://openalex.org/W4297517337","https://openalex.org/W4308973104","https://openalex.org/W4323857582","https://openalex.org/W6783290986","https://openalex.org/W6784610137"],"related_works":["https://openalex.org/W3133229618","https://openalex.org/W3047159181","https://openalex.org/W3199047933","https://openalex.org/W3094494252","https://openalex.org/W3109111614","https://openalex.org/W6906558124","https://openalex.org/W4320061657","https://openalex.org/W4282824856","https://openalex.org/W3204635183","https://openalex.org/W3096738825"],"abstract_inverted_index":null,"counts_by_year":[{"year":2025,"cited_by_count":1}],"updated_date":"2026-11-04T10:54:05.112534","created_date":"2023-09-21T00:00:00"}