{"id":"https://openalex.org/W4386474333","doi":"https://doi.org/10.1016/j.stress.2023.100215","title":"Genome-wide analysis reveals the TCP-miR159-miR319 module is crucial for rice (Oryza sativa L.) growth and response to drought and salinity.","display_name":"Genome-wide analysis reveals the TCP-miR159-miR319 module is crucial for rice (Oryza sativa L.) growth and response to drought and salinity.","publication_year":2023,"publication_date":"2023-09-06","ids":{"openalex":"https://openalex.org/W4386474333","doi":"https://doi.org/10.1016/j.stress.2023.100215"},"language":"en","primary_location":{"id":"doi:10.1016/j.stress.2023.100215","doi":"https://doi.org/10.1016/j.stress.2023.100215","is_oa":true,"landing_page_url":"https://doi.org/10.1016/j.stress.2023.100215","pdf_url":null,"source":{"id":"https://openalex.org/S4210194692","display_name":"Plant Stress","issn_l":"2667-064X","issn":["2667-064X"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["cwts-core","doaj","jufo-1","norway-1","oarl","poland-20"],"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Plant Stress","raw_type":"journal-article"},"volume":null,"type":"article","is_traditional":true,"indexed_in":["crossref","doaj"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://doi.org/10.1016/j.stress.2023.100215","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5048670252","display_name":"Sadia Gull","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I78978612","display_name":"Yangzhou University","ror":"https://ror.org/03tqb8s11","country_code":"CN","type":"education","lineage":["https://openalex.org/I78978612"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Sadia Gull","raw_affiliation_strings":["College of Plant Protection, Yangzhou University, Yangzhou, Jiangsu 225009, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Plant Protection, Yangzhou University, Yangzhou, Jiangsu 225009, China","institution_ids":["https://openalex.org/I78978612"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5001305451","display_name":"Saleem Uddin","orcid":"https://orcid.org/0000-0002-7597-1237","observed_orcids":["https://orcid.org/0000-0002-7597-1237"]},"institutions":[{"id":"https://openalex.org/I142108993","display_name":"Southwest University","ror":"https://ror.org/01kj4z117","country_code":"CN","type":"education","lineage":["https://openalex.org/I142108993"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Saleem Uddin","raw_affiliation_strings":["College of Horticulture and Landscape Architecture, Southwest University, Chongqing 400716, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Horticulture and Landscape Architecture, Southwest University, Chongqing 400716, China","institution_ids":["https://openalex.org/I142108993"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5040702295","display_name":"Hafiz Athar Hussain","orcid":"https://orcid.org/0000-0001-5239-6172","observed_orcids":["https://orcid.org/0000-0001-5239-6172"]},"institutions":[{"id":"https://openalex.org/I142108993","display_name":"Southwest University","ror":"https://ror.org/01kj4z117","country_code":"CN","type":"education","lineage":["https://openalex.org/I142108993"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Hafiz Athar Hussain","raw_affiliation_strings":["College of Horticulture and Landscape Architecture, Southwest University, Chongqing 400716, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Horticulture and Landscape Architecture, Southwest University, Chongqing 400716, China","institution_ids":["https://openalex.org/I142108993"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100375564","display_name":"Shuang Wang","orcid":"https://orcid.org/0000-0001-9275-5299","observed_orcids":["https://orcid.org/0000-0001-9275-5299"]},"institutions":[{"id":"https://openalex.org/I78978612","display_name":"Yangzhou University","ror":"https://ror.org/03tqb8s11","country_code":"CN","type":"education","lineage":["https://openalex.org/I78978612"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Shuang Wang","raw_affiliation_strings":["College of Plant Protection, Yangzhou University, Yangzhou, Jiangsu 225009, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Plant Protection, Yangzhou University, Yangzhou, Jiangsu 225009, China","institution_ids":["https://openalex.org/I78978612"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5092762654","display_name":"Jalal Bayar","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I246743127","display_name":"The University of Agriculture, Peshawar","ror":"https://ror.org/02sp3q482","country_code":"PK","type":"education","lineage":["https://openalex.org/I246743127"]}],"countries":["PK"],"is_corresponding":false,"raw_author_name":"Jalal Bayar","raw_affiliation_strings":["Department of Agronomy, The University of Agriculture Peshawar, Peshawar 25120, Pakistan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Agronomy, The University of Agriculture Peshawar, Peshawar 25120, Pakistan","institution_ids":["https://openalex.org/I246743127"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5056712638","display_name":"Jinglan Liu","orcid":"https://orcid.org/0000-0001-6211-2890","observed_orcids":["https://orcid.org/0000-0001-6211-2890"]},"institutions":[{"id":"https://openalex.org/I78978612","display_name":"Yangzhou University","ror":"https://ror.org/03tqb8s11","country_code":"CN","type":"education","lineage":["https://openalex.org/I78978612"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Jinglan Liu","raw_affiliation_strings":["College of Plant Protection, Yangzhou University, Yangzhou, Jiangsu 225009, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Plant Protection, Yangzhou University, Yangzhou, Jiangsu 225009, China","institution_ids":["https://openalex.org/I78978612"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5056712638"],"corresponding_institution_ids":["https://openalex.org/I78978612"],"apc_list":{"value":1400,"currency":"USD","value_usd":1400},"apc_paid":{"value":1400,"currency":"USD","value_usd":1400},"fwci":1.6618,"has_fulltext":false,"cited_by_count":12,"citation_normalized_percentile":{"value":0.81068785,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":95,"max":98},"biblio":{"volume":"10","issue":null,"first_page":"100215","last_page":"100215"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10184","display_name":"Plant Molecular Biology Research","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10184","display_name":"Plant Molecular Biology Research","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10014","display_name":"Plant Stress Responses and Tolerance","score":0.00019999999494757503,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12475","display_name":"Plant Parasitism and Resistance","score":0.0,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/tcp-transcription-factors","display_name":"TCP transcription factors","score":0.8389999866485596},{"id":"https://openalex.org/keywords/mir159","display_name":"miR159","score":0.9449999928474426},{"id":"https://openalex.org/keywords/mir319","display_name":"miR319","score":1.0},{"id":"https://openalex.org/keywords/rice","display_name":"rice","score":0.6060000061988831},{"id":"https://openalex.org/keywords/drought-stress","display_name":"drought stress","score":0.8980000019073486},{"id":"https://openalex.org/keywords/salt-stress","display_name":"salt stress","score":0.9739999771118164},{"id":"https://openalex.org/keywords/auxin-signaling","display_name":"auxin signaling","score":0.7149999737739563},{"id":"https://openalex.org/keywords/gene-expression-profiling","display_name":"gene expression profiling","score":0.5720000267028809},{"id":"https://openalex.org/keywords/phylogenetic-clustering","display_name":"phylogenetic clustering","score":0.7940000295639038},{"id":"https://openalex.org/keywords/mirna-target-prediction","display_name":"miRNA target prediction","score":0.6769999861717224},{"id":"https://openalex.org/keywords/plant-growth-and-development","display_name":"plant growth and development","score":0.6859999895095825},{"id":"https://openalex.org/keywords/abiotic-stress-response","display_name":"abiotic stress response","score":0.6639999747276306}],"concepts":[{"id":"https://openalex.org/C2778543611","wikidata":"https://www.wikidata.org/wiki/Q161426","display_name":"Oryza sativa","level":3,"score":0.8397790193557739},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.774610161781311},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.7253542542457581},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.6479640007019043},{"id":"https://openalex.org/C8415881","wikidata":"https://www.wikidata.org/wiki/Q6839217","display_name":"Microarray analysis techniques","level":4,"score":0.5504171848297119},{"id":"https://openalex.org/C44465124","wikidata":"https://www.wikidata.org/wiki/Q713623","display_name":"Clade","level":4,"score":0.5381117463111877},{"id":"https://openalex.org/C186836561","wikidata":"https://www.wikidata.org/wiki/Q1931516","display_name":"Microarray","level":4,"score":0.49124687910079956},{"id":"https://openalex.org/C2987395477","wikidata":"https://www.wikidata.org/wiki/Q135085","display_name":"Gene ontology","level":4,"score":0.4796733856201172},{"id":"https://openalex.org/C18431079","wikidata":"https://www.wikidata.org/wiki/Q1502169","display_name":"Gene expression profiling","level":4,"score":0.4744240641593933},{"id":"https://openalex.org/C2777923347","wikidata":"https://www.wikidata.org/wiki/Q690633","display_name":"Oryza","level":4,"score":0.45904746651649475},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.45670270919799805},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.4237849712371826},{"id":"https://openalex.org/C90132467","wikidata":"https://www.wikidata.org/wiki/Q171184","display_name":"Phylogenetics","level":3,"score":0.37660589814186096},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.3260759115219116}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1016/j.stress.2023.100215","doi":"https://doi.org/10.1016/j.stress.2023.100215","is_oa":true,"landing_page_url":"https://doi.org/10.1016/j.stress.2023.100215","pdf_url":null,"source":{"id":"https://openalex.org/S4210194692","display_name":"Plant Stress","issn_l":"2667-064X","issn":["2667-064X"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["cwts-core","doaj","jufo-1","norway-1","oarl","poland-20"],"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Plant Stress","raw_type":"journal-article"},{"id":"pmh:oai:doaj.org/article:173dc6af28e14cfba68959304a3b7f67","doi":null,"is_oa":true,"landing_page_url":"https://doaj.org/article/173dc6af28e14cfba68959304a3b7f67","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Plant Stress, Vol 10, Iss , Pp 100215- (2023)","raw_type":"article"}],"best_oa_location":{"id":"doi:10.1016/j.stress.2023.100215","doi":"https://doi.org/10.1016/j.stress.2023.100215","is_oa":true,"landing_page_url":"https://doi.org/10.1016/j.stress.2023.100215","pdf_url":null,"source":{"id":"https://openalex.org/S4210194692","display_name":"Plant Stress","issn_l":"2667-064X","issn":["2667-064X"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["cwts-core","doaj","jufo-1","norway-1","oarl","poland-20"],"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Plant Stress","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/2","display_name":"Zero hunger","score":0.8409000039100647}],"study_designs":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":75,"referenced_works":["https://openalex.org/W1896681215","https://openalex.org/W1909993122","https://openalex.org/W1963536129","https://openalex.org/W1996511356","https://openalex.org/W2003062832","https://openalex.org/W2039355319","https://openalex.org/W2042570077","https://openalex.org/W2048928592","https://openalex.org/W2049354794","https://openalex.org/W2059569140","https://openalex.org/W2063944697","https://openalex.org/W2067048150","https://openalex.org/W2072777662","https://openalex.org/W2084709911","https://openalex.org/W2084799820","https://openalex.org/W2100680386","https://openalex.org/W2119205648","https://openalex.org/W2138098955","https://openalex.org/W2141290377","https://openalex.org/W2150789757","https://openalex.org/W2154110613","https://openalex.org/W2160862063","https://openalex.org/W2162151071","https://openalex.org/W2169669582","https://openalex.org/W2422138179","https://openalex.org/W2477453901","https://openalex.org/W2503240832","https://openalex.org/W2509075769","https://openalex.org/W2602584533","https://openalex.org/W2749573973","https://openalex.org/W2752651139","https://openalex.org/W2761719638","https://openalex.org/W2768005838","https://openalex.org/W2793884874","https://openalex.org/W2807949675","https://openalex.org/W2914172150","https://openalex.org/W2914267186","https://openalex.org/W2915762001","https://openalex.org/W2921183496","https://openalex.org/W2923955894","https://openalex.org/W2933525591","https://openalex.org/W2946717857","https://openalex.org/W2953994524","https://openalex.org/W2961947643","https://openalex.org/W2963987086","https://openalex.org/W2966478152","https://openalex.org/W3004949581","https://openalex.org/W3086975404","https://openalex.org/W3087139798","https://openalex.org/W3129577391","https://openalex.org/W3138238053","https://openalex.org/W3147068985","https://openalex.org/W3164733764","https://openalex.org/W3167530027","https://openalex.org/W3186934428","https://openalex.org/W3194637839","https://openalex.org/W4205482434","https://openalex.org/W4220661273","https://openalex.org/W4221087044","https://openalex.org/W4281692873","https://openalex.org/W4291535903","https://openalex.org/W4292257939","https://openalex.org/W4296955232","https://openalex.org/W4307656575","https://openalex.org/W4308773498","https://openalex.org/W4310496916","https://openalex.org/W4311629934","https://openalex.org/W4361263515","https://openalex.org/W4361263579","https://openalex.org/W4366824916","https://openalex.org/W4375948119","https://openalex.org/W4381851681","https://openalex.org/W4385652080","https://openalex.org/W6641200245","https://openalex.org/W6767064526"],"related_works":["https://openalex.org/W3087139798","https://openalex.org/W2901110416","https://openalex.org/W2071827962","https://openalex.org/W2768005838","https://openalex.org/W185127964","https://openalex.org/W4313215871","https://openalex.org/W4417191666","https://openalex.org/W4402354759","https://openalex.org/W2935706349","https://openalex.org/W4286213853"],"abstract_inverted_index":{"The":[0,24,56,81,100,131],"TCP":[1],"are":[2,89],"key":[3,47],"plant-specific":[4],"proteins":[5,86],"responsible":[6],"for":[7,189],"regulating":[8],"various":[9,182],"developmental":[10,94],"activities.":[11],"Herein,":[12],"we":[13,158],"retrieved":[14],"21":[15],"OsTCP":[16,50,61,85,116,144,161],"genes":[17,51,117,145,162],"from":[18],"the":[19,42,46,75,92,111,141,147,155,164,178],"genome":[20,167],"database":[21],"of":[22,49,84,115,143,150],"rice.":[23],"bioinformatics":[25],"analysis,":[26,36],"including":[27],"conserved":[28],"motif,":[29],"domain,":[30],"interactive":[31],"proteins,":[32],"gene":[33],"ontology":[34],"(GO)":[35],"target":[37],"micro-RNAs":[38],"(miRNA)":[39],"prediction,":[40],"and":[41,78,110,125,129,137,174,176],"physiochemical":[43],"properties,":[44],"highlight":[45],"aspects":[48],"in":[52,98,106,122,146,163,172],"Oryza":[53],"sativa":[54,166],"L.":[55],"phylogeny":[57],"analysis":[58,83,103],"disclosed":[59],"that":[60,134,160],"was":[62],"further":[63,140,190],"clustered":[64],"into":[65],"five":[66],"clades":[67],"(Clade":[68],"I":[69],"-":[70],"Clade":[71],"V)":[72],"based":[73],"on":[74],"structural":[76],"similarities":[77],"functional":[79,191],"diversities.":[80],"GO":[82],"showed":[87,104],"they":[88],"primarily":[90],"exercising":[91],"rice":[93,108,151],"processes,":[95],"reproductive":[96],"stages":[97],"particular.":[99],"microarray":[101],"expression":[102,113],"transcription":[105],"twelve":[107],"tissues,":[109],"differential":[112],"pattern":[114],"revealed":[118],"their":[119],"possible":[120],"involvement":[121],"auxin-mediated":[123],"growth":[124,173],"response":[126],"against":[127],"salinity":[128],"drought.":[130],"predicted":[132],"miRNA":[133],"includes":[135],"miR159":[136],"miR319":[138],"families":[139],"engagement":[142],"post-translational":[148],"regulation":[149],"growth.":[152],"Owing":[153],"to":[154,181],"above-mentioned":[156],"outcomes,":[157],"speculate":[159],"O.":[165],"play":[168],"an":[169],"essential":[170],"role":[171],"development":[175],"fine-tuning":[177],"immune":[179],"responses":[180],"environmental":[183],"stresses,":[184],"thus":[185],"providing":[186],"major":[187],"indications":[188],"studies.":[192]},"counts_by_year":[{"year":2026,"cited_by_count":2},{"year":2025,"cited_by_count":3},{"year":2024,"cited_by_count":7}],"updated_date":"2026-11-10T11:39:43.021295","created_date":"2023-09-07T00:00:00"}