{"id":"https://openalex.org/W4385877408","doi":"https://doi.org/10.1158/1541-7786.23968588.v1","title":"Supplementary Data File S2 from USP1 Expression Driven by EWS::FLI1 Transcription Factor Stabilizes Survivin and Mitigates Replication Stress in Ewing Sarcoma","display_name":"Supplementary Data File S2 from USP1 Expression Driven by EWS::FLI1 Transcription Factor Stabilizes Survivin and Mitigates Replication Stress in Ewing Sarcoma","publication_year":2023,"publication_date":"2023-08-16","ids":{"openalex":"https://openalex.org/W4385877408","doi":"https://doi.org/10.1158/1541-7786.23968588.v1"},"language":"en","primary_location":{"id":"doi:10.1158/1541-7786.23968588.v1","doi":"https://doi.org/10.1158/1541-7786.23968588.v1","is_oa":true,"landing_page_url":"https://doi.org/10.1158/1541-7786.23968588.v1","pdf_url":null,"source":null,"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"acceptedVersion","is_accepted":true,"is_published":false,"raw_source_name":"American Association for Cancer Research","raw_type":"posted-content"},"volume":null,"type":"supplementary-materials","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://doi.org/10.1158/1541-7786.23968588.v1","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5035433197","display_name":"Halle J. Mallard","orcid":"https://orcid.org/0000-0002-8534-9759","observed_orcids":["https://orcid.org/0000-0002-8534-9759"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Halle J. Mallard","raw_affiliation_strings":[],"raw_orcid":"https://orcid.org/0000-0002-8534-9759","affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5065053020","display_name":"Shibiao Wan","orcid":"https://orcid.org/0000-0003-0661-2684","observed_orcids":["https://orcid.org/0000-0003-0661-2684"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Shibiao Wan","raw_affiliation_strings":[],"raw_orcid":"https://orcid.org/0000-0003-0661-2684","affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5013817010","display_name":"Prakriti Nidhi","orcid":"https://orcid.org/0000-0003-0665-5879","observed_orcids":["https://orcid.org/0000-0003-0665-5879"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Prakriti Nidhi","raw_affiliation_strings":[],"raw_orcid":"https://orcid.org/0000-0003-0665-5879","affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5092515617","display_name":"Yvan D. Hanscom-Trofy","orcid":"https://orcid.org/0009-0009-6017-4102","observed_orcids":["https://orcid.org/0009-0009-6017-4102"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Yvan D. Hanscom-Trofy","raw_affiliation_strings":[],"raw_orcid":"https://orcid.org/0009-0009-6017-4102","affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5052638149","display_name":"Bhopal C. Mohapatra","orcid":"https://orcid.org/0000-0003-3434-4306","observed_orcids":["https://orcid.org/0000-0003-3434-4306"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Bhopal Mohapatra","raw_affiliation_strings":[],"raw_orcid":"https://orcid.org/0000-0003-3434-4306","affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5086801886","display_name":"Nicholas T. Woods","orcid":"https://orcid.org/0000-0002-4962-9083","observed_orcids":["https://orcid.org/0000-0002-4962-9083"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Nicholas T. Woods","raw_affiliation_strings":[],"raw_orcid":"https://orcid.org/0000-0002-4962-9083","affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5076792937","display_name":"Jos\u00e9 Antonio L\u00f3pez\u2010Guerrero","orcid":"https://orcid.org/0000-0002-7369-8388","observed_orcids":["https://orcid.org/0000-0002-7369-8388"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Jose Antonio Lopez-Guerrero","raw_affiliation_strings":[],"raw_orcid":"https://orcid.org/0000-0002-7369-8388","affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5081762027","display_name":"Antonio Llombart-Bosch","orcid":"https://orcid.org/0000-0001-9205-103X","observed_orcids":["https://orcid.org/0000-0001-9205-103X"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Antonio Llombart-Bosch","raw_affiliation_strings":[],"raw_orcid":"https://orcid.org/0000-0001-9205-103X","affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5020278891","display_name":"Isidro Machado","orcid":"https://orcid.org/0000-0001-7318-1330","observed_orcids":["https://orcid.org/0000-0001-7318-1330"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Isidro Machado","raw_affiliation_strings":[],"raw_orcid":"https://orcid.org/0000-0001-7318-1330","affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5015636061","display_name":"Katia Scotlandi","orcid":"https://orcid.org/0000-0001-6114-9499","observed_orcids":["https://orcid.org/0000-0001-6114-9499"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Katia Scotlandi","raw_affiliation_strings":[],"raw_orcid":"https://orcid.org/0000-0001-6114-9499","affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5088279314","display_name":"Natasha F. Kreiling","orcid":"https://orcid.org/0009-0000-7847-3375","observed_orcids":["https://orcid.org/0009-0000-7847-3375","https://orcid.org/0000-0002-1067-3722"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Natasha F. Kreiling","raw_affiliation_strings":[],"raw_orcid":"https://orcid.org/0009-0000-7847-3375","affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5023732783","display_name":"Megan C. Perry","orcid":"https://orcid.org/0009-0000-0558-2378","observed_orcids":["https://orcid.org/0009-0000-0558-2378"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Megan C. Perry","raw_affiliation_strings":[],"raw_orcid":"https://orcid.org/0009-0000-0558-2378","affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5023583190","display_name":"Sameer Mirza","orcid":"https://orcid.org/0000-0002-9394-2421","observed_orcids":["https://orcid.org/0000-0002-9394-2421"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Sameer Mirza","raw_affiliation_strings":[],"raw_orcid":"https://orcid.org/0000-0002-9394-2421","affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5001227004","display_name":"Donald W. Coulter","orcid":"https://orcid.org/0000-0002-7829-0971","observed_orcids":["https://orcid.org/0000-0002-7829-0971"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Donald W. Coulter","raw_affiliation_strings":[],"raw_orcid":"https://orcid.org/0000-0002-7829-0971","affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5031432482","display_name":"Vimla Band","orcid":"https://orcid.org/0000-0003-2014-7205","observed_orcids":["https://orcid.org/0000-0003-2014-7205"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Vimla Band","raw_affiliation_strings":[],"raw_orcid":"https://orcid.org/0000-0003-2014-7205","affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5001446897","display_name":"Hamid Band","orcid":"https://orcid.org/0000-0002-4996-9002","observed_orcids":["https://orcid.org/0000-0002-4996-9002"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Hamid Band","raw_affiliation_strings":[],"raw_orcid":"https://orcid.org/0000-0002-4996-9002","affiliations":[]},{"author_position":"last","author":{"id":"https://openalex.org/A5039747575","display_name":"Gargi Ghosal","orcid":"https://orcid.org/0000-0001-8399-5354","observed_orcids":["https://orcid.org/0000-0001-8399-5354"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Gargi Ghosal","raw_affiliation_strings":[],"raw_orcid":"https://orcid.org/0000-0001-8399-5354","affiliations":[]}],"institutions":[],"countries_distinct_count":0,"institutions_distinct_count":0,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10253","display_name":"Sarcoma Diagnosis and Treatment","score":0.8755000233650208,"subfield":{"id":"https://openalex.org/subfields/2740","display_name":"Pulmonary and Respiratory Medicine"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T10253","display_name":"Sarcoma Diagnosis and Treatment","score":0.8755000233650208,"subfield":{"id":"https://openalex.org/subfields/2740","display_name":"Pulmonary and Respiratory Medicine"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T11041","display_name":"Ubiquitin and proteasome pathways","score":0.07890000194311142,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10583","display_name":"Cancer-related Molecular Pathways","score":0.010400000028312206,"subfield":{"id":"https://openalex.org/subfields/2730","display_name":"Oncology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/usp1","display_name":"USP1","score":0.968999981880188},{"id":"https://openalex.org/keywords/ews-fli1","display_name":"EWS-FLI1","score":0.9620000123977661},{"id":"https://openalex.org/keywords/ewing-sarcoma","display_name":"Ewing sarcoma","score":0.9520000219345093},{"id":"https://openalex.org/keywords/survivin","display_name":"survivin","score":0.9120000004768372},{"id":"https://openalex.org/keywords/replication-stress","display_name":"replication stress","score":0.8579999804496765},{"id":"https://openalex.org/keywords/protein-stability","display_name":"protein stability","score":0.6110000014305115},{"id":"https://openalex.org/keywords/differentially-expressed-proteins","display_name":"differentially expressed proteins","score":0.9010000228881836},{"id":"https://openalex.org/keywords/pathway-analysis","display_name":"pathway analysis","score":0.5350000262260437},{"id":"https://openalex.org/keywords/proteomics","display_name":"proteomics","score":0.5}],"concepts":[{"id":"https://openalex.org/C12590798","wikidata":"https://www.wikidata.org/wiki/Q3933199","display_name":"Replication (statistics)","level":2,"score":0.713346004486084},{"id":"https://openalex.org/C2775975398","wikidata":"https://www.wikidata.org/wiki/Q906904","display_name":"Survivin","level":3,"score":0.6389001607894897},{"id":"https://openalex.org/C86339819","wikidata":"https://www.wikidata.org/wiki/Q407384","display_name":"Transcription factor","level":3,"score":0.5243188142776489},{"id":"https://openalex.org/C179926584","wikidata":"https://www.wikidata.org/wiki/Q207714","display_name":"Transcription (linguistics)","level":2,"score":0.48271748423576355},{"id":"https://openalex.org/C502942594","wikidata":"https://www.wikidata.org/wiki/Q3421914","display_name":"Cancer research","level":1,"score":0.45227038860321045},{"id":"https://openalex.org/C2778256501","wikidata":"https://www.wikidata.org/wiki/Q223911","display_name":"Sarcoma","level":2,"score":0.4495500326156616},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.3908790349960327},{"id":"https://openalex.org/C159047783","wikidata":"https://www.wikidata.org/wiki/Q7215","display_name":"Virology","level":1,"score":0.22486409544944763},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.1914987564086914},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.15852347016334534},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.1460658311843872},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.049756258726119995},{"id":"https://openalex.org/C41895202","wikidata":"https://www.wikidata.org/wiki/Q8162","display_name":"Linguistics","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1158/1541-7786.23968588.v1","doi":"https://doi.org/10.1158/1541-7786.23968588.v1","is_oa":true,"landing_page_url":"https://doi.org/10.1158/1541-7786.23968588.v1","pdf_url":null,"source":null,"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"acceptedVersion","is_accepted":true,"is_published":false,"raw_source_name":"American Association for Cancer Research","raw_type":"posted-content"},{"id":"pmh:oai:figshare.com:article/23968588","doi":null,"is_oa":true,"landing_page_url":"https://figshare.com/articles/dataset/Supplementary_Data_File_S2_from_USP1_Expression_Driven_by_EWS_FLI1_Transcription_Factor_Stabilizes_Survivin_and_Mitigates_Replication_Stress_in_Ewing_Sarcoma/23968588","pdf_url":null,"source":{"id":"https://openalex.org/S4377196282","display_name":"Figshare","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I4210132348","host_organization_name":"Figshare (United Kingdom)","host_organization_lineage":["https://openalex.org/I4210132348"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Dataset"}],"best_oa_location":{"id":"doi:10.1158/1541-7786.23968588.v1","doi":"https://doi.org/10.1158/1541-7786.23968588.v1","is_oa":true,"landing_page_url":"https://doi.org/10.1158/1541-7786.23968588.v1","pdf_url":null,"source":null,"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"acceptedVersion","is_accepted":true,"is_published":false,"raw_source_name":"American Association for Cancer Research","raw_type":"posted-content"},"sustainable_development_goals":[{"display_name":"Good health and well-being","id":"https://metadata.un.org/sdg/3","score":0.504800021648407}],"sustainable_development_goals_aurora":[{"display_name":"Zero hunger","id":"https://metadata.un.org/sdg/2","score":0.47999998927116394}],"study_designs":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":0,"referenced_works":[],"related_works":["https://openalex.org/W2080053800","https://openalex.org/W2955113018","https://openalex.org/W307194245","https://openalex.org/W2064698074","https://openalex.org/W994533074","https://openalex.org/W2151783231","https://openalex.org/W3010624073","https://openalex.org/W1951362600","https://openalex.org/W2097434817","https://openalex.org/W3030542211"],"abstract_inverted_index":{"Analysis":[0],"of":[1,9],"TMT-MS":[2],"data;":[3],"Page":[4],"2:":[5],"DAVID":[6],"pathway":[7],"analysis":[8],"differentially":[10],"expressed":[11],"proteins":[12],"identified":[13],"by":[14],"TMT-MS.":[15]},"counts_by_year":[],"updated_date":"2026-09-24T07:57:37.273135","created_date":"2025-10-10T00:00:00"}
