{"id":"https://openalex.org/W4378374698","doi":"https://doi.org/10.1016/j.micres.2023.127411","title":"Absence of proline-peptide transporter YjiY in Salmonella Typhimurium leads to secretion of factors which inhibits intra-species biofilm formation","display_name":"Absence of proline-peptide transporter YjiY in Salmonella Typhimurium leads to secretion of factors which inhibits intra-species biofilm formation","publication_year":2023,"publication_date":"2023-05-26","ids":{"openalex":"https://openalex.org/W4378374698","doi":"https://doi.org/10.1016/j.micres.2023.127411","pmid":"https://pubmed.ncbi.nlm.nih.gov/37285689"},"language":"en","primary_location":{"id":"doi:10.1016/j.micres.2023.127411","doi":"https://doi.org/10.1016/j.micres.2023.127411","is_oa":true,"landing_page_url":"https://doi.org/10.1016/j.micres.2023.127411","pdf_url":null,"source":{"id":"https://openalex.org/S106450229","display_name":"Microbiological Research","issn_l":"0944-5013","issn":["0944-5013","1618-0623"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["cwts-core","dongbi-d","doyens","jufo-1","ki-jl-1","medline","norway-1","poland-100","russia-white-list-1"],"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Microbiological Research","raw_type":"journal-article"},"volume":null,"type":"article","is_traditional":true,"indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://doi.org/10.1016/j.micres.2023.127411","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5070489115","display_name":"Kasturi Chandra","orcid":"https://orcid.org/0000-0002-1596-9290","observed_orcids":["https://orcid.org/0000-0002-1596-9290"]},"institutions":[{"id":"https://openalex.org/I59270414","display_name":"Indian Institute of Science Bangalore","ror":"https://ror.org/04dese585","country_code":"IN","type":"education","lineage":["https://openalex.org/I59270414"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Kasturi Chandra","raw_affiliation_strings":["Department of Microbiology and Cell Biology, Indian Institute of Science, Bangalore, India"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Microbiology and Cell Biology, Indian Institute of Science, Bangalore, India","institution_ids":["https://openalex.org/I59270414"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5073878781","display_name":"Abhilash Vijay Nair","orcid":"https://orcid.org/0000-0002-0822-7651","observed_orcids":["https://orcid.org/0000-0002-0822-7651"]},"institutions":[{"id":"https://openalex.org/I59270414","display_name":"Indian Institute of Science Bangalore","ror":"https://ror.org/04dese585","country_code":"IN","type":"education","lineage":["https://openalex.org/I59270414"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Abhilash Vijay Nair","raw_affiliation_strings":["Department of Microbiology and Cell Biology, Indian Institute of Science, Bangalore, India"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Microbiology and Cell Biology, Indian Institute of Science, Bangalore, India","institution_ids":["https://openalex.org/I59270414"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5018333739","display_name":"Ritika Chatterjee","orcid":"https://orcid.org/0000-0003-3432-9245","observed_orcids":["https://orcid.org/0000-0003-3432-9245"]},"institutions":[{"id":"https://openalex.org/I59270414","display_name":"Indian Institute of Science Bangalore","ror":"https://ror.org/04dese585","country_code":"IN","type":"education","lineage":["https://openalex.org/I59270414"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Ritika Chatterjee","raw_affiliation_strings":["Department of Microbiology and Cell Biology, Indian Institute of Science, Bangalore, India"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Microbiology and Cell Biology, Indian Institute of Science, Bangalore, India","institution_ids":["https://openalex.org/I59270414"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5079537441","display_name":"Prerana Muralidhara","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I59270414","display_name":"Indian Institute of Science Bangalore","ror":"https://ror.org/04dese585","country_code":"IN","type":"education","lineage":["https://openalex.org/I59270414"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Prerana Muralidhara","raw_affiliation_strings":["Department of Microbiology and Cell Biology, Indian Institute of Science, Bangalore, India"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Microbiology and Cell Biology, Indian Institute of Science, Bangalore, India","institution_ids":["https://openalex.org/I59270414"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5068338535","display_name":"Anmol Singh","orcid":"https://orcid.org/0000-0001-9320-320X","observed_orcids":["https://orcid.org/0000-0001-9320-320X"]},"institutions":[{"id":"https://openalex.org/I59270414","display_name":"Indian Institute of Science Bangalore","ror":"https://ror.org/04dese585","country_code":"IN","type":"education","lineage":["https://openalex.org/I59270414"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Anmol Singh","raw_affiliation_strings":["Department of Microbiology and Cell Biology, Indian Institute of Science, Bangalore, India"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Microbiology and Cell Biology, Indian Institute of Science, Bangalore, India","institution_ids":["https://openalex.org/I59270414"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5068355172","display_name":"Sathisha Kamanna","orcid":"https://orcid.org/0000-0001-6231-9883","observed_orcids":["https://orcid.org/0000-0001-6231-9883"]},"institutions":[{"id":"https://openalex.org/I59270414","display_name":"Indian Institute of Science Bangalore","ror":"https://ror.org/04dese585","country_code":"IN","type":"education","lineage":["https://openalex.org/I59270414"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Sathisha Kamanna","raw_affiliation_strings":["Department of Biochemistry, Indian Institute of Science, Bangalore, India"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biochemistry, Indian Institute of Science, Bangalore, India","institution_ids":["https://openalex.org/I59270414"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5015977998","display_name":"Utpal Shashikant Tatu","orcid":"https://orcid.org/0000-0003-0404-8872","observed_orcids":["https://orcid.org/0000-0003-0404-8872"]},"institutions":[{"id":"https://openalex.org/I59270414","display_name":"Indian Institute of Science Bangalore","ror":"https://ror.org/04dese585","country_code":"IN","type":"education","lineage":["https://openalex.org/I59270414"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Utpal S. Tatu","raw_affiliation_strings":["Department of Biochemistry, Indian Institute of Science, Bangalore, India"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biochemistry, Indian Institute of Science, Bangalore, India","institution_ids":["https://openalex.org/I59270414"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5030416693","display_name":"Dipshikha Chakravortty","orcid":"https://orcid.org/0000-0002-7838-5145","observed_orcids":["https://orcid.org/0000-0002-7838-5145"]},"institutions":[{"id":"https://openalex.org/I50557253","display_name":"Indian Institute of Science Education and Research Thiruvananthapuram","ror":"https://ror.org/01pe3t004","country_code":"IN","type":"education","lineage":["https://openalex.org/I50557253"]},{"id":"https://openalex.org/I59270414","display_name":"Indian Institute of Science Bangalore","ror":"https://ror.org/04dese585","country_code":"IN","type":"education","lineage":["https://openalex.org/I59270414"]}],"countries":["IN"],"is_corresponding":true,"raw_author_name":"Dipshikha Chakravortty","raw_affiliation_strings":["Department of Microbiology and Cell Biology, Indian Institute of Science, Bangalore, India; Adjunct Faculty, School of Biology, Indian Institute of Science Education and Research, Thiruvananthapuram, India. Electronic address: dipa@iisc.ac.in","Adjunct Faculty, School of Biology, Indian Institute of Science Education and Research, Thiruvananthapuram, India","Department of Microbiology and Cell Biology, Indian Institute of Science, Bangalore, India"],"raw_orcid":"https://orcid.org/0000-0002-7838-5145","affiliations":[{"raw_affiliation_string":"Department of Microbiology and Cell Biology, Indian Institute of Science, Bangalore, India; Adjunct Faculty, School of Biology, Indian Institute of Science Education and Research, Thiruvananthapuram, India. Electronic address: dipa@iisc.ac.in","institution_ids":["https://openalex.org/I50557253","https://openalex.org/I59270414"]},{"raw_affiliation_string":"Adjunct Faculty, School of Biology, Indian Institute of Science Education and Research, Thiruvananthapuram, India","institution_ids":["https://openalex.org/I50557253"]},{"raw_affiliation_string":"Department of Microbiology and Cell Biology, Indian Institute of Science, Bangalore, India","institution_ids":["https://openalex.org/I59270414"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5030416693"],"corresponding_institution_ids":["https://openalex.org/I50557253","https://openalex.org/I59270414"],"apc_list":{"value":4020,"currency":"USD","value_usd":4020},"apc_paid":null,"fwci":0.5288,"has_fulltext":false,"cited_by_count":7,"citation_normalized_percentile":{"value":0.53249077,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":88,"max":97},"biblio":{"volume":"273","issue":null,"first_page":"127411","last_page":"127411"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10593","display_name":"Bacterial biofilms and quorum sensing","score":0.9951000213623047,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10593","display_name":"Bacterial biofilms and quorum sensing","score":0.9951000213623047,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10120","display_name":"Bacterial Genetics and Biotechnology","score":0.003700000001117587,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10943","display_name":"Escherichia coli research studies","score":0.0006000000284984708,"subfield":{"id":"https://openalex.org/subfields/2404","display_name":"Microbiology"},"field":{"id":"https://openalex.org/fields/24","display_name":"Immunology and Microbiology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/salmonella-typhimurium","display_name":"Salmonella typhimurium","score":0.9869999885559082},{"id":"https://openalex.org/keywords/biofilm-inhibition","display_name":"biofilm inhibition","score":0.8360000252723694},{"id":"https://openalex.org/keywords/cell-free-supernatant","display_name":"cell-free supernatant","score":0.8650000095367432},{"id":"https://openalex.org/keywords/carbon-starvation","display_name":"carbon starvation","score":0.6759999990463257},{"id":"https://openalex.org/keywords/flgm","display_name":"FlgM","score":0.8679999709129333},{"id":"https://openalex.org/keywords/flagella","display_name":"flagella","score":0.7049999833106995},{"id":"https://openalex.org/keywords/nusg","display_name":"NusG","score":0.9869999885559082},{"id":"https://openalex.org/keywords/h-ns","display_name":"H-NS","score":0.972000002861023},{"id":"https://openalex.org/keywords/global-transcriptional-regulator","display_name":"global transcriptional regulator","score":0.6690000295639038},{"id":"https://openalex.org/keywords/glutaredoxin","display_name":"glutaredoxin","score":1.0},{"id":"https://openalex.org/keywords/thiol-peroxidase","display_name":"thiol peroxidase","score":0.9850000143051147},{"id":"https://openalex.org/keywords/reactive-oxygen-species","display_name":"reactive oxygen species","score":0.9829999804496765},{"id":"https://openalex.org/keywords/oxidative-stress","display_name":"oxidative stress","score":0.8339999914169312}],"concepts":[{"id":"https://openalex.org/C58123911","wikidata":"https://www.wikidata.org/wiki/Q467410","display_name":"Biofilm","level":3,"score":0.9337879419326782},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.8166913986206055},{"id":"https://openalex.org/C89423630","wikidata":"https://www.wikidata.org/wiki/Q7193","display_name":"Microbiology","level":1,"score":0.7909226417541504},{"id":"https://openalex.org/C2781065037","wikidata":"https://www.wikidata.org/wiki/Q150839","display_name":"Salmonella","level":3,"score":0.6213551163673401},{"id":"https://openalex.org/C188082640","wikidata":"https://www.wikidata.org/wiki/Q1780899","display_name":"Complementation","level":4,"score":0.5803181529045105},{"id":"https://openalex.org/C523546767","wikidata":"https://www.wikidata.org/wiki/Q10876","display_name":"Bacteria","level":2,"score":0.5094688534736633},{"id":"https://openalex.org/C143065580","wikidata":"https://www.wikidata.org/wiki/Q3285695","display_name":"Mutant","level":3,"score":0.4140614867210388},{"id":"https://openalex.org/C2779607309","wikidata":"https://www.wikidata.org/wiki/Q2264864","display_name":"Salmonella enterica","level":4,"score":0.4134975075721741},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.2619829773902893},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.16590535640716553},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011392","descriptor_name":"Proline","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D012486","descriptor_name":"Salmonella typhimurium","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D012486","descriptor_name":"Salmonella typhimurium","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D014435","descriptor_name":"Typhoid Fever","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D018441","descriptor_name":"Biofilms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D026901","descriptor_name":"Membrane Transport Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false}],"locations_count":2,"locations":[{"id":"doi:10.1016/j.micres.2023.127411","doi":"https://doi.org/10.1016/j.micres.2023.127411","is_oa":true,"landing_page_url":"https://doi.org/10.1016/j.micres.2023.127411","pdf_url":null,"source":{"id":"https://openalex.org/S106450229","display_name":"Microbiological Research","issn_l":"0944-5013","issn":["0944-5013","1618-0623"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["cwts-core","dongbi-d","doyens","jufo-1","ki-jl-1","medline","norway-1","poland-100","russia-white-list-1"],"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Microbiological Research","raw_type":"journal-article"},{"id":"pmid:37285689","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/37285689","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Microbiological research","raw_type":"Journal Article"}],"best_oa_location":{"id":"doi:10.1016/j.micres.2023.127411","doi":"https://doi.org/10.1016/j.micres.2023.127411","is_oa":true,"landing_page_url":"https://doi.org/10.1016/j.micres.2023.127411","pdf_url":null,"source":{"id":"https://openalex.org/S106450229","display_name":"Microbiological Research","issn_l":"0944-5013","issn":["0944-5013","1618-0623"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["cwts-core","dongbi-d","doyens","jufo-1","ki-jl-1","medline","norway-1","poland-100","russia-white-list-1"],"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Microbiological Research","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Good health and well-being","id":"https://metadata.un.org/sdg/3","score":0.428600013256073}],"study_designs":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":75,"referenced_works":["https://openalex.org/W121064638","https://openalex.org/W1583942422","https://openalex.org/W1588438160","https://openalex.org/W1599002996","https://openalex.org/W1970604584","https://openalex.org/W1992841053","https://openalex.org/W1994205261","https://openalex.org/W1996221252","https://openalex.org/W2006181950","https://openalex.org/W2016158447","https://openalex.org/W2020459826","https://openalex.org/W2024498667","https://openalex.org/W2026856977","https://openalex.org/W2062139873","https://openalex.org/W2067566372","https://openalex.org/W2071789812","https://openalex.org/W2071999738","https://openalex.org/W2072333923","https://openalex.org/W2079744143","https://openalex.org/W2080292048","https://openalex.org/W2084162463","https://openalex.org/W2090646249","https://openalex.org/W2108540012","https://openalex.org/W2117414599","https://openalex.org/W2120722473","https://openalex.org/W2122343132","https://openalex.org/W2122721391","https://openalex.org/W2129006693","https://openalex.org/W2130424990","https://openalex.org/W2136538121","https://openalex.org/W2141311721","https://openalex.org/W2143939511","https://openalex.org/W2145429597","https://openalex.org/W2146626584","https://openalex.org/W2148558010","https://openalex.org/W2149116450","https://openalex.org/W2150389885","https://openalex.org/W2152749400","https://openalex.org/W2158816114","https://openalex.org/W2163942376","https://openalex.org/W2191183145","https://openalex.org/W2192819731","https://openalex.org/W2297740385","https://openalex.org/W2475943270","https://openalex.org/W2499281969","https://openalex.org/W2507163756","https://openalex.org/W2511242571","https://openalex.org/W2538045531","https://openalex.org/W2739852539","https://openalex.org/W2753150462","https://openalex.org/W2756067653","https://openalex.org/W2757972702","https://openalex.org/W2782308553","https://openalex.org/W2786049734","https://openalex.org/W2797184297","https://openalex.org/W2800790547","https://openalex.org/W2806709049","https://openalex.org/W2808076717","https://openalex.org/W2811005164","https://openalex.org/W2903895936","https://openalex.org/W2911108397","https://openalex.org/W2913523145","https://openalex.org/W2948188768","https://openalex.org/W2949415382","https://openalex.org/W2961276096","https://openalex.org/W2979246406","https://openalex.org/W3004527156","https://openalex.org/W3084262776","https://openalex.org/W3120688865","https://openalex.org/W3126230446","https://openalex.org/W3194131713","https://openalex.org/W3201722642","https://openalex.org/W4238861095","https://openalex.org/W6744534172","https://openalex.org/W6751683718"],"related_works":["https://openalex.org/W4214854421","https://openalex.org/W3042797769","https://openalex.org/W2811005164","https://openalex.org/W2088085650","https://openalex.org/W2580533373","https://openalex.org/W7149596064","https://openalex.org/W2519463193","https://openalex.org/W3084262776","https://openalex.org/W2522309178","https://openalex.org/W2134186130"],"abstract_inverted_index":null,"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":3},{"year":2024,"cited_by_count":2},{"year":2023,"cited_by_count":1}],"updated_date":"2026-11-04T10:54:05.112534","created_date":"2023-05-27T00:00:00"}