{"id":"https://openalex.org/W4376615005","doi":"https://doi.org/10.3390/ijms24108705","title":"Genome-Wide Characterization of Light-Regulated Gene Expression in Botrytis cinerea Reveals Underlying Complex Photobiology","display_name":"Genome-Wide Characterization of Light-Regulated Gene Expression in Botrytis cinerea Reveals Underlying Complex Photobiology","publication_year":2023,"publication_date":"2023-05-13","ids":{"openalex":"https://openalex.org/W4376615005","doi":"https://doi.org/10.3390/ijms24108705","pmid":"https://pubmed.ncbi.nlm.nih.gov/37240051","pmcid":"https://www.ncbi.nlm.nih.gov/pmc/articles/10218500"},"language":"en","primary_location":{"id":"doi:10.3390/ijms24108705","doi":"https://doi.org/10.3390/ijms24108705","is_oa":true,"landing_page_url":"https://doi.org/10.3390/ijms24108705","pdf_url":"https://www.mdpi.com/1422-0067/24/10/8705/pdf?version=1683953387","source":{"id":"https://openalex.org/S10623703","display_name":"International Journal of Molecular Sciences","issn_l":"1422-0067","issn":["1422-0067","1661-6596"],"is_oa":true,"is_in_doaj":false,"is_core":true,"listed_in":["anvur-scientific","cwts-core","medline","poland-140","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310310987","host_organization_name":"Multidisciplinary Digital Publishing Institute","host_organization_lineage":["https://openalex.org/P4310310987"],"host_organization_lineage_names":["Multidisciplinary Digital Publishing Institute"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"International Journal of Molecular Sciences","raw_type":"journal-article"},"volume":null,"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://www.mdpi.com/1422-0067/24/10/8705/pdf?version=1683953387","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5003745004","display_name":"Gabriel P\u00e9rez-Lara","orcid":"https://orcid.org/0000-0002-1468-1260","observed_orcids":["https://orcid.org/0000-0002-1468-1260"]},"institutions":[{"id":"https://openalex.org/I13897259","display_name":"Universidad Andr\u00e9s Bello","ror":"https://ror.org/01qq57711","country_code":"CL","type":"education","lineage":["https://openalex.org/I13897259"]},{"id":"https://openalex.org/I2802531901","display_name":"Millennium Science Initiative","ror":"https://ror.org/01c080z51","country_code":"CL","type":"government","lineage":["https://openalex.org/I2802531901"]},{"id":"https://openalex.org/I4210167034","display_name":"Millennium Institute for Integrative Biology","ror":"https://ror.org/05xcmte05","country_code":"CL","type":"other","lineage":["https://openalex.org/I4210167034"]}],"countries":["CL"],"is_corresponding":false,"raw_author_name":"Gabriel P\u00e9rez-Lara","raw_affiliation_strings":["ANID\u2013Millennium Science Initiative\u2013Millennium Institute for Integrative Biology (iBIO), Santiago 7500565, Chile","Centro de Biotecnologia Vegetal, Facultad de Ciencias de la Vida, Universidad Andres Bello, Santiago 8370186, Chile"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"ANID\u2013Millennium Science Initiative\u2013Millennium Institute for Integrative Biology (iBIO), Santiago 7500565, Chile","institution_ids":["https://openalex.org/I2802531901","https://openalex.org/I4210167034"]},{"raw_affiliation_string":"Centro de Biotecnologia Vegetal, Facultad de Ciencias de la Vida, Universidad Andres Bello, Santiago 8370186, Chile","institution_ids":["https://openalex.org/I13897259"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5029766427","display_name":"Consuelo Olivares-Y\u00e1\u00f1ez","orcid":"https://orcid.org/0000-0002-7292-3467","observed_orcids":["https://orcid.org/0000-0002-7292-3467"]},"institutions":[{"id":"https://openalex.org/I13897259","display_name":"Universidad Andr\u00e9s Bello","ror":"https://ror.org/01qq57711","country_code":"CL","type":"education","lineage":["https://openalex.org/I13897259"]},{"id":"https://openalex.org/I2802531901","display_name":"Millennium Science Initiative","ror":"https://ror.org/01c080z51","country_code":"CL","type":"government","lineage":["https://openalex.org/I2802531901"]},{"id":"https://openalex.org/I4210167034","display_name":"Millennium Institute for Integrative Biology","ror":"https://ror.org/05xcmte05","country_code":"CL","type":"other","lineage":["https://openalex.org/I4210167034"]}],"countries":["CL"],"is_corresponding":false,"raw_author_name":"Consuelo Olivares-Ya\u00f1ez","raw_affiliation_strings":["ANID\u2013Millennium Science Initiative\u2013Millennium Institute for Integrative Biology (iBIO), Santiago 7500565, Chile","Centro de Biotecnologia Vegetal, Facultad de Ciencias de la Vida, Universidad Andres Bello, Santiago 8370186, Chile"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"ANID\u2013Millennium Science Initiative\u2013Millennium Institute for Integrative Biology (iBIO), Santiago 7500565, Chile","institution_ids":["https://openalex.org/I2802531901","https://openalex.org/I4210167034"]},{"raw_affiliation_string":"Centro de Biotecnologia Vegetal, Facultad de Ciencias de la Vida, Universidad Andres Bello, Santiago 8370186, Chile","institution_ids":["https://openalex.org/I13897259"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5060689942","display_name":"Harm van Bakel","orcid":"https://orcid.org/0000-0002-1376-6916","observed_orcids":["https://orcid.org/0000-0002-1376-6916"]},"institutions":[{"id":"https://openalex.org/I98704320","display_name":"Icahn School of Medicine at Mount Sinai","ror":"https://ror.org/04a9tmd77","country_code":"US","type":"education","lineage":["https://openalex.org/I1320796813","https://openalex.org/I98704320"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Harm van Bakel","raw_affiliation_strings":["Department of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, One Gustave L. Levy Place, New York, NY 10029, USA","Department of Microbiology, Icahn School of Medicine at Mount Sinai, One Gustave L. Levy Place, New York, NY 10029, USA","Icahn Genomics Institute, Icahn School of Medicine at Mount Sinai, One Gustave L. Levy Place, New York, NY 10029, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, One Gustave L. Levy Place, New York, NY 10029, USA","institution_ids":["https://openalex.org/I98704320"]},{"raw_affiliation_string":"Department of Microbiology, Icahn School of Medicine at Mount Sinai, One Gustave L. Levy Place, New York, NY 10029, USA","institution_ids":["https://openalex.org/I98704320"]},{"raw_affiliation_string":"Icahn Genomics Institute, Icahn School of Medicine at Mount Sinai, One Gustave L. Levy Place, New York, NY 10029, USA","institution_ids":["https://openalex.org/I98704320"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5134940460","display_name":"Luis Fernando Larrondo","orcid":"https://orcid.org/0000-0002-8832-7109","observed_orcids":["https://orcid.org/0000-0002-8832-7109"]},"institutions":[{"id":"https://openalex.org/I162148367","display_name":"Pontificia Universidad Cat\u00f3lica de Chile","ror":"https://ror.org/04teye511","country_code":"CL","type":"education","lineage":["https://openalex.org/I162148367"]},{"id":"https://openalex.org/I2802531901","display_name":"Millennium Science Initiative","ror":"https://ror.org/01c080z51","country_code":"CL","type":"government","lineage":["https://openalex.org/I2802531901"]},{"id":"https://openalex.org/I4210167034","display_name":"Millennium Institute for Integrative Biology","ror":"https://ror.org/05xcmte05","country_code":"CL","type":"other","lineage":["https://openalex.org/I4210167034"]}],"countries":["CL"],"is_corresponding":false,"raw_author_name":"Luis F. Larrondo","raw_affiliation_strings":["ANID\u2013Millennium Science Initiative\u2013Millennium Institute for Integrative Biology (iBIO), Santiago 7500565, Chile","Departamento de Genetica Molecular y Microbiologia, Facultad de Ciencias Biologicas, Pontificia Universidad Catolica de Chile, Santiago 8331150, Chile"],"raw_orcid":"https://orcid.org/0000-0002-8832-7109","affiliations":[{"raw_affiliation_string":"ANID\u2013Millennium Science Initiative\u2013Millennium Institute for Integrative Biology (iBIO), Santiago 7500565, Chile","institution_ids":["https://openalex.org/I2802531901","https://openalex.org/I4210167034"]},{"raw_affiliation_string":"Departamento de Genetica Molecular y Microbiologia, Facultad de Ciencias Biologicas, Pontificia Universidad Catolica de Chile, Santiago 8331150, Chile","institution_ids":["https://openalex.org/I162148367"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5022104701","display_name":"Paulo Canessa","orcid":"https://orcid.org/0000-0003-3138-8223","observed_orcids":["https://orcid.org/0000-0003-3138-8223"]},"institutions":[{"id":"https://openalex.org/I13897259","display_name":"Universidad Andr\u00e9s Bello","ror":"https://ror.org/01qq57711","country_code":"CL","type":"education","lineage":["https://openalex.org/I13897259"]},{"id":"https://openalex.org/I2802531901","display_name":"Millennium Science Initiative","ror":"https://ror.org/01c080z51","country_code":"CL","type":"government","lineage":["https://openalex.org/I2802531901"]},{"id":"https://openalex.org/I4210167034","display_name":"Millennium Institute for Integrative Biology","ror":"https://ror.org/05xcmte05","country_code":"CL","type":"other","lineage":["https://openalex.org/I4210167034"]}],"countries":["CL"],"is_corresponding":true,"raw_author_name":"Paulo Canessa","raw_affiliation_strings":["ANID\u2013Millennium Science Initiative\u2013Millennium Institute for Integrative Biology (iBIO), Santiago 7500565, Chile","Centro de Biotecnologia Vegetal, Facultad de Ciencias de la Vida, Universidad Andres Bello, Santiago 8370186, Chile"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"ANID\u2013Millennium Science Initiative\u2013Millennium Institute for Integrative Biology (iBIO), Santiago 7500565, Chile","institution_ids":["https://openalex.org/I2802531901","https://openalex.org/I4210167034"]},{"raw_affiliation_string":"Centro de Biotecnologia Vegetal, Facultad de Ciencias de la Vida, Universidad Andres Bello, Santiago 8370186, Chile","institution_ids":["https://openalex.org/I13897259"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5022104701"],"corresponding_institution_ids":["https://openalex.org/I13897259","https://openalex.org/I2802531901","https://openalex.org/I4210167034"],"apc_list":{"value":2500,"currency":"CHF","value_usd":2780},"apc_paid":{"value":2500,"currency":"CHF","value_usd":2780},"fwci":1.4516,"has_fulltext":true,"cited_by_count":10,"citation_normalized_percentile":{"value":0.79148708,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":92,"max":98},"biblio":{"volume":"24","issue":"10","first_page":"8705","last_page":"8705"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11268","display_name":"Light effects on plants","score":0.37279999256134033,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11268","display_name":"Light effects on plants","score":0.37279999256134033,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10825","display_name":"Plant Pathogens and Fungal Diseases","score":0.19529999792575836,"subfield":{"id":"https://openalex.org/subfields/1307","display_name":"Cell Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11900","display_name":"Fungal Plant Pathogen Control","score":0.17440000176429749,"subfield":{"id":"https://openalex.org/subfields/1105","display_name":"Ecology, Evolution, Behavior and Systematics"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/botrytis-cinerea","display_name":"Botrytis cinerea","score":1.0},{"id":"https://openalex.org/keywords/white-collar-1","display_name":"white collar-1","score":0.8169999718666077},{"id":"https://openalex.org/keywords/blue-light-receptor","display_name":"blue light receptor","score":0.8840000033378601},{"id":"https://openalex.org/keywords/photoreceptors","display_name":"photoreceptors","score":0.6600000262260437},{"id":"https://openalex.org/keywords/light-controlled-gene-expression","display_name":"light-regulated gene expression","score":0.9580000042915344},{"id":"https://openalex.org/keywords/necrotrophic-fungal-infection","display_name":"necrotrophic fungal infection","score":0.5789999961853027},{"id":"https://openalex.org/keywords/arabidopsis-thaliana","display_name":"Arabidopsis thaliana","score":0.9350000023841858},{"id":"https://openalex.org/keywords/virulence","display_name":"virulence","score":0.8069999814033508},{"id":"https://openalex.org/keywords/plant-defense","display_name":"plant defense","score":0.43799999356269836},{"id":"https://openalex.org/keywords/energy-metabolism","display_name":"energy metabolism","score":0.5600000023841858},{"id":"https://openalex.org/keywords/transcriptome","display_name":"transcriptome","score":0.3569999933242798}],"concepts":[{"id":"https://openalex.org/C2775867217","wikidata":"https://www.wikidata.org/wiki/Q1135851","display_name":"Botrytis cinerea","level":2,"score":0.9488946199417114},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.8732097148895264},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.6500944495201111},{"id":"https://openalex.org/C2776919067","wikidata":"https://www.wikidata.org/wiki/Q134284","display_name":"Botrytis","level":3,"score":0.6085688471794128},{"id":"https://openalex.org/C60987743","wikidata":"https://www.wikidata.org/wiki/Q1460232","display_name":"Virulence","level":3,"score":0.6060096621513367},{"id":"https://openalex.org/C143065580","wikidata":"https://www.wikidata.org/wiki/Q3285695","display_name":"Mutant","level":3,"score":0.5837603211402893},{"id":"https://openalex.org/C2775988993","wikidata":"https://www.wikidata.org/wiki/Q158695","display_name":"Arabidopsis thaliana","level":4,"score":0.5715162754058838},{"id":"https://openalex.org/C2779491563","wikidata":"https://www.wikidata.org/wiki/Q157892","display_name":"Arabidopsis","level":4,"score":0.562595009803772},{"id":"https://openalex.org/C2775839086","wikidata":"https://www.wikidata.org/wiki/Q6471530","display_name":"Pathogenic fungus","level":3,"score":0.4939456582069397},{"id":"https://openalex.org/C162317418","wikidata":"https://www.wikidata.org/wiki/Q252857","display_name":"Transcriptome","level":4,"score":0.48634272813796997},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.4711044430732727},{"id":"https://openalex.org/C89423630","wikidata":"https://www.wikidata.org/wiki/Q7193","display_name":"Microbiology","level":1,"score":0.4465230107307434},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.4304809868335724},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.3230556845664978}],"mesh":[{"descriptor_ui":"D010935","descriptor_name":"Plant Diseases","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D010935","descriptor_name":"Plant Diseases","qualifier_ui":"Q000382","qualifier_name":"microbiology","is_major_topic":false},{"descriptor_ui":"D015870","descriptor_name":"Gene Expression","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017360","descriptor_name":"Arabidopsis","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D017360","descriptor_name":"Arabidopsis","qualifier_ui":"Q000382","qualifier_name":"microbiology","is_major_topic":true},{"descriptor_ui":"D018462","descriptor_name":"Photobiology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D018506","descriptor_name":"Gene Expression Regulation, Plant","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020171","descriptor_name":"Botrytis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.3390/ijms24108705","doi":"https://doi.org/10.3390/ijms24108705","is_oa":true,"landing_page_url":"https://doi.org/10.3390/ijms24108705","pdf_url":"https://www.mdpi.com/1422-0067/24/10/8705/pdf?version=1683953387","source":{"id":"https://openalex.org/S10623703","display_name":"International Journal of Molecular Sciences","issn_l":"1422-0067","issn":["1422-0067","1661-6596"],"is_oa":true,"is_in_doaj":false,"is_core":true,"listed_in":["anvur-scientific","cwts-core","medline","poland-140","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310310987","host_organization_name":"Multidisciplinary Digital Publishing Institute","host_organization_lineage":["https://openalex.org/P4310310987"],"host_organization_lineage_names":["Multidisciplinary Digital Publishing Institute"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"International Journal of Molecular Sciences","raw_type":"journal-article"},{"id":"pmh:oai:pubmedcentral.nih.gov:10218500","doi":null,"is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/10218500","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC10218500/pdf/ijms-24-08705.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Int J Mol Sci","raw_type":"Text"},{"id":"pmid:37240051","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/37240051","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"International journal of molecular sciences","raw_type":"Journal Article"},{"id":"pmh:oai:repositorio.unab.cl:ria/61350","doi":null,"is_oa":true,"landing_page_url":"https://repositorio.unab.cl/handle/ria/61350","pdf_url":"https://repositorio.unab.cl/bitstreams/7bab925e-794e-4d9a-9a0a-6ae3be2e866c/download","source":{"id":"https://openalex.org/S4306400858","display_name":"Repositorio Institucional Acad\u00e9mico , Sistema de Bibliotecas Universidad Andr\u00e9s Bello (UNAB) (Universidad Andr\u00e9s Bello (UNAB))","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I4210156962","host_organization_name":"Universidad Dr. Andr\u00e9s Bello","host_organization_lineage":["https://openalex.org/I4210156962"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Art\u00edculo"}],"best_oa_location":{"id":"doi:10.3390/ijms24108705","doi":"https://doi.org/10.3390/ijms24108705","is_oa":true,"landing_page_url":"https://doi.org/10.3390/ijms24108705","pdf_url":"https://www.mdpi.com/1422-0067/24/10/8705/pdf?version=1683953387","source":{"id":"https://openalex.org/S10623703","display_name":"International Journal of Molecular Sciences","issn_l":"1422-0067","issn":["1422-0067","1661-6596"],"is_oa":true,"is_in_doaj":false,"is_core":true,"listed_in":["anvur-scientific","cwts-core","medline","poland-140","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310310987","host_organization_name":"Multidisciplinary Digital Publishing Institute","host_organization_lineage":["https://openalex.org/P4310310987"],"host_organization_lineage_names":["Multidisciplinary Digital Publishing Institute"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"International Journal of Molecular Sciences","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/2","display_name":"Zero hunger","score":0.40450000762939453}],"study_designs":[],"awards":[{"id":"https://openalex.org/G3184353081","display_name":null,"funder_award_id":"3190628","funder_id":"https://openalex.org/F4320334812","funder_display_name":"Comisi\u00f3n Nacional de Investigaci\u00f3n Cient\u00edfica y Tecnol\u00f3gica"},{"id":"https://openalex.org/G3410762436","display_name":"ASSESSING THE ROLE OF SOCIAL SRNA IN THE BOTRYTIS-TRICHODERMA INTERACTION","funder_award_id":"3190628","funder_id":"https://openalex.org/F4320331146","funder_display_name":"Agencia Nacional de Investigaci\u00f3n y Desarrollo"},{"id":"https://openalex.org/G4084203167","display_name":"Big Omics Data Engine 2 Supercomputer","funder_award_id":"1s10od026880-01","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G4727163740","display_name":null,"funder_award_id":"3190628","funder_id":"https://openalex.org/F4320338073","funder_display_name":"Fondo Nacional de Desarrollo Cient\u00edfico y Tecnol\u00f3gico"},{"id":"https://openalex.org/G5284675477","display_name":null,"funder_award_id":"ICN17_022","funder_id":"https://openalex.org/F4320331146","funder_display_name":"Agencia Nacional de Investigaci\u00f3n y Desarrollo"},{"id":"https://openalex.org/G5585772244","display_name":null,"funder_award_id":"1190611","funder_id":"https://openalex.org/F4320334812","funder_display_name":"Comisi\u00f3n Nacional de Investigaci\u00f3n Cient\u00edfica y Tecnol\u00f3gica"},{"id":"https://openalex.org/G6083746180","display_name":"IRON ACQUISITION IN BOTRYTIS CINEREA THE REDUCTIVE IRON ASSIMILATION PATHWAY AND THE MODULATION OF THE FUNGAL PATHOGENIC POTENTIAL.","funder_award_id":"1190611","funder_id":"https://openalex.org/F4320331146","funder_display_name":"Agencia Nacional de Investigaci\u00f3n y Desarrollo"},{"id":"https://openalex.org/G6447821733","display_name":null,"funder_award_id":"21210760","funder_id":"https://openalex.org/F4320334812","funder_display_name":"Comisi\u00f3n Nacional de Investigaci\u00f3n Cient\u00edfica y Tecnol\u00f3gica"},{"id":"https://openalex.org/G7800425709","display_name":null,"funder_award_id":"11140678","funder_id":"https://openalex.org/F4320334812","funder_display_name":"Comisi\u00f3n Nacional de Investigaci\u00f3n Cient\u00edfica y Tecnol\u00f3gica"},{"id":"https://openalex.org/G7971341814","display_name":"COVID and Translational Science supercomputer (CATS)","funder_award_id":"1s10od030463-01","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G8703714907","display_name":"DIGGING INTO THE LIGHT-DEPENDENT REGULATION OF A PATHOGEN/HOST MOLECULAR SYSTEM UNDERSTANDING THE EFFECTS OF LIGHT MODULATING  BOTRYTIS CINEREA PATHOGENESIS ON ARABIDOPSIS THALIANA.","funder_award_id":"11140678","funder_id":"https://openalex.org/F4320331146","funder_display_name":"Agencia Nacional de Investigaci\u00f3n y Desarrollo"},{"id":"https://openalex.org/G9000872736","display_name":"Conduits: Mount Sinai Health System Translational Science Hub","funder_award_id":"UL1TR004419","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"}],"funders":[{"id":"https://openalex.org/F4320331146","display_name":"Agencia Nacional de Investigaci\u00f3n y Desarrollo","ror":"https://ror.org/05btm5233"},{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320334812","display_name":"Comisi\u00f3n Nacional de Investigaci\u00f3n Cient\u00edfica y Tecnol\u00f3gica","ror":"https://ror.org/02ap3w078"},{"id":"https://openalex.org/F4320337472","display_name":"National Center for Advancing Translational Sciences","ror":"https://ror.org/04pw6fb54"},{"id":"https://openalex.org/F4320338073","display_name":"Fondo Nacional de Desarrollo Cient\u00edfico y Tecnol\u00f3gico","ror":"https://ror.org/02ap3w078"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4376615005.pdf","grobid_xml":"https://content.openalex.org/works/W4376615005.grobid-xml"},"referenced_works_count":62,"referenced_works":["https://openalex.org/W1523902116","https://openalex.org/W1589862831","https://openalex.org/W1864021403","https://openalex.org/W1934545207","https://openalex.org/W1938406104","https://openalex.org/W1945661233","https://openalex.org/W1966327575","https://openalex.org/W1970312062","https://openalex.org/W1974116356","https://openalex.org/W1982454925","https://openalex.org/W1984668713","https://openalex.org/W1997070889","https://openalex.org/W2002495711","https://openalex.org/W2007518091","https://openalex.org/W2026021379","https://openalex.org/W2030470198","https://openalex.org/W2033876912","https://openalex.org/W2056319775","https://openalex.org/W2061117777","https://openalex.org/W2073555182","https://openalex.org/W2092022527","https://openalex.org/W2092392048","https://openalex.org/W2110065044","https://openalex.org/W2112044923","https://openalex.org/W2118751052","https://openalex.org/W2124737945","https://openalex.org/W2129824725","https://openalex.org/W2131271579","https://openalex.org/W2144868839","https://openalex.org/W2145120518","https://openalex.org/W2162616598","https://openalex.org/W2166574880","https://openalex.org/W2169003523","https://openalex.org/W2169456326","https://openalex.org/W2169784081","https://openalex.org/W2179438025","https://openalex.org/W2277362925","https://openalex.org/W2312827689","https://openalex.org/W2328746547","https://openalex.org/W2331481621","https://openalex.org/W2332299787","https://openalex.org/W2337351770","https://openalex.org/W2474373794","https://openalex.org/W2604726463","https://openalex.org/W2650152358","https://openalex.org/W2766051486","https://openalex.org/W2799501975","https://openalex.org/W2808745360","https://openalex.org/W2899104222","https://openalex.org/W2921224140","https://openalex.org/W2970123092","https://openalex.org/W2988240595","https://openalex.org/W2988878233","https://openalex.org/W3046951412","https://openalex.org/W3198859234","https://openalex.org/W3207115724","https://openalex.org/W3216705517","https://openalex.org/W4214858427","https://openalex.org/W4229070024","https://openalex.org/W4283171707","https://openalex.org/W4290805706","https://openalex.org/W4297995000"],"related_works":["https://openalex.org/W2026021379","https://openalex.org/W4376634563","https://openalex.org/W2092392048","https://openalex.org/W7095806112","https://openalex.org/W4301905264","https://openalex.org/W4409304172","https://openalex.org/W4297073252","https://openalex.org/W1988978396","https://openalex.org/W2743441178","https://openalex.org/W4376509008"],"abstract_inverted_index":{"Botrytis":[0],"cinerea":[1,105,153,198,234],"is":[2],"a":[3,26,31,93,110,193,205,239,248],"necrotrophic":[4],"fungus":[5],"characterized":[6],"mainly":[7],"by":[8,59],"its":[9,125],"wide":[10],"host":[11],"range":[12],"of":[13,18,43,53],"infected":[14],"plants.":[15,221],"The":[16,107],"deletion":[17],"the":[19,41,51,54,87,99,115,121,128,140,144,167,178,182,196,227],"white-collar-1":[20],"gene":[21,89],"(bcwcl1),":[22],"which":[23],"encodes":[24],"for":[25],"blue-light":[27],"receptor/transcription":[28],"factor,":[29],"causes":[30],"decrease":[32,194],"in":[33,40,74,143,151,164,177,191,195,219],"virulence,":[34],"particularly":[35],"when":[36,79,131,244],"assays":[37],"are":[38],"conducted":[39,71],"presence":[42],"light":[44,96,122,141,168,206,242],"or":[45,102],"photocycles.":[46],"However,":[47],"despite":[48],"ample":[49],"characterization,":[50],"extent":[52],"light-modulated":[55],"transcriptional":[56],"responses":[57],"regulated":[58],"BcWCL1":[60],"remains":[61],"unknown.":[62],"In":[63,170],"this":[64],"study,":[65],"pathogen":[66],"and":[67,78,181,236,251],"pathogen:host":[68],"RNA-seq":[69],"analyses,":[70],"during":[72,124,173],"non-infective":[73],"vitro":[75],"plate":[76],"growth":[77],"infecting":[80,132],"Arabidopsis":[81],"thaliana":[82],"leaves,":[83],"respectively,":[84],"informed":[85],"on":[86,98,247],"global":[88],"expression":[90],"patterns":[91],"after":[92,204,238],"60":[94,240],"min":[95,241],"pulse":[97,123,142,243],"wild-type":[100,232],"B05.10":[101,179,235],"\u2206bcwcl1":[103,145,183,237],"B.":[104,152,197,233],"strains.":[106],"results":[108,225],"revealed":[109],"complex":[111],"fungal":[112],"photobiology,":[113],"where":[114],"mutant":[116],"did":[117],"not":[118],"react":[119],"to":[120,160,166],"interaction":[126],"with":[127,211],"plant.":[129],"Indeed,":[130],"Arabidopsis,":[133],"no":[134],"photoreceptor-encoding":[135],"genes":[136,149,218],"were":[137,157],"upregulated":[138],"upon":[139],"mutant.":[146,184],"Differentially":[147],"expressed":[148],"(DEGs)":[150],"under":[154],"non-infecting":[155],"conditions":[156],"predominantly":[158],"related":[159],"decreased":[161],"energy":[162],"production":[163],"response":[165],"pulse.":[169],"contrast,":[171],"DEGs":[172],"infection":[174],"significantly":[175],"differ":[176],"strain":[180],"Upon":[185],"illumination":[186],"at":[187],"24":[188],"h":[189],"post-infection":[190],"planta,":[192],"virulence-associated":[199],"transcripts":[200],"was":[201],"observed.":[202],"Accordingly,":[203],"pulse,":[207],"biological":[208],"functions":[209],"associated":[210],"plant":[212],"defense":[213],"appear":[214],"enriched":[215],"among":[216],"light-repressed":[217],"fungus-infected":[220],"Taken":[222],"together,":[223],"our":[224],"show":[226],"main":[228],"transcriptomic":[229],"differences":[230],"between":[231],"growing":[245],"saprophytically":[246],"Petri":[249],"dish":[250],"necrotrophically":[252],"over":[253],"A.":[254],"thaliana.":[255]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":3},{"year":2024,"cited_by_count":6}],"updated_date":"2026-11-04T10:54:05.112534","created_date":"2023-05-17T00:00:00"}