{"id":"https://openalex.org/W4366817005","doi":"https://doi.org/10.1097/inf.0000000000003941","title":"Postmortem Nasopharyngeal Microbiome Analysis of Zambian Infants With and Without Respiratory Syncytial Virus Disease: A Nested Case Control Study","display_name":"Postmortem Nasopharyngeal Microbiome Analysis of Zambian Infants With and Without Respiratory Syncytial Virus Disease: A Nested Case Control Study","publication_year":2023,"publication_date":"2023-04-24","ids":{"openalex":"https://openalex.org/W4366817005","doi":"https://doi.org/10.1097/inf.0000000000003941","pmid":"https://pubmed.ncbi.nlm.nih.gov/37093853","pmcid":"https://www.ncbi.nlm.nih.gov/pmc/articles/10348642"},"language":"en","primary_location":{"id":"doi:10.1097/inf.0000000000003941","doi":"https://doi.org/10.1097/inf.0000000000003941","is_oa":true,"landing_page_url":"https://doi.org/10.1097/inf.0000000000003941","pdf_url":null,"source":{"id":"https://openalex.org/S109369870","display_name":"The Pediatric Infectious Disease Journal","issn_l":"0891-3668","issn":["0891-3668","1532-0987"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["cwts-core","dongbi-c","doyens","jufo-1","ki-jl-1","medline","norway-1","poland-100","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310315671","host_organization_name":"Lippincott Williams & Wilkins","host_organization_lineage":["https://openalex.org/P4310315671","https://openalex.org/P4310318547"],"host_organization_lineage_names":["Lippincott Williams & Wilkins","Wolters Kluwer"],"type":"journal"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Pediatric Infectious Disease Journal","raw_type":"journal-article"},"volume":null,"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://doi.org/10.1097/inf.0000000000003941","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5043357374","display_name":"Jessica McClintock","orcid":"https://orcid.org/0000-0002-0542-9872","observed_orcids":["https://orcid.org/0000-0002-0542-9872"]},"institutions":[{"id":"https://openalex.org/I4402554120","display_name":"Rutgers New Jersey Medical School","ror":"https://ror.org/014ye1258","country_code":"US","type":"education","lineage":["https://openalex.org/I102322142","https://openalex.org/I4390039302","https://openalex.org/I4402554120"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Jessica McClintock","raw_affiliation_strings":["Division of Infectious Disease, Center for Data Science, Rutgers New Jersey Medical School, Newark, New Jersey"],"raw_orcid":"https://orcid.org/0000-0002-0542-9872","affiliations":[{"raw_affiliation_string":"Division of Infectious Disease, Center for Data Science, Rutgers New Jersey Medical School, Newark, New Jersey","institution_ids":["https://openalex.org/I4402554120"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5004345433","display_name":"Aubrey R. Odom-Mabey","orcid":"https://orcid.org/0000-0001-7113-7598","observed_orcids":["https://orcid.org/0000-0001-7113-7598"]},"institutions":[{"id":"https://openalex.org/I111088046","display_name":"Boston University","ror":"https://ror.org/05qwgg493","country_code":"US","type":"education","lineage":["https://openalex.org/I111088046"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Aubrey R. Odom-Mabey","raw_affiliation_strings":["Bioinformatics Program, Boston University, Boston, Massachusetts"],"raw_orcid":"https://orcid.org/0000-0001-7113-7598","affiliations":[{"raw_affiliation_string":"Bioinformatics Program, Boston University, Boston, Massachusetts","institution_ids":["https://openalex.org/I111088046"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5079007967","display_name":"Nitsueh Kebere","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I111088046","display_name":"Boston University","ror":"https://ror.org/05qwgg493","country_code":"US","type":"education","lineage":["https://openalex.org/I111088046"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Nitsueh Kebere","raw_affiliation_strings":["Bioinformatics Program, Boston University, Boston, Massachusetts"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Bioinformatics Program, Boston University, Boston, Massachusetts","institution_ids":["https://openalex.org/I111088046"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5051785095","display_name":"Arshad Ismail","orcid":"https://orcid.org/0000-0003-4672-5915","observed_orcids":["https://orcid.org/0000-0003-4672-5915"]},"institutions":[{"id":"https://openalex.org/I107920810","display_name":"National Health Laboratory Service","ror":"https://ror.org/00znvbk37","country_code":"ZA","type":"government","lineage":["https://openalex.org/I107920810"]},{"id":"https://openalex.org/I4387155312","display_name":"National Institute for Communicable Diseases","ror":"https://ror.org/007wwmx82","country_code":"ZA","type":"government","lineage":["https://openalex.org/I4387155312"]},{"id":"https://openalex.org/I84929415","display_name":"University of Venda","ror":"https://ror.org/0338xea48","country_code":"ZA","type":"education","lineage":["https://openalex.org/I84929415"]}],"countries":["ZA"],"is_corresponding":false,"raw_author_name":"Arshad Ismail","raw_affiliation_strings":["Department of Biochemistry and Microbiology, University of Venda, Thohoyandou, South Africa","Sequencing Core Facility, National Institute for Communicable Diseases of the National Health Laboratory Service, Johannesburg, South Africa"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biochemistry and Microbiology, University of Venda, Thohoyandou, South Africa","institution_ids":["https://openalex.org/I84929415"]},{"raw_affiliation_string":"Sequencing Core Facility, National Institute for Communicable Diseases of the National Health Laboratory Service, Johannesburg, South Africa","institution_ids":["https://openalex.org/I107920810","https://openalex.org/I4387155312"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5001586892","display_name":"Lawrence M Mwananyanda","orcid":"https://orcid.org/0000-0002-3034-749X","observed_orcids":["https://orcid.org/0000-0002-3034-749X"]},"institutions":[{"id":"https://openalex.org/I111088046","display_name":"Boston University","ror":"https://ror.org/05qwgg493","country_code":"US","type":"education","lineage":["https://openalex.org/I111088046"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Lawrence Mwananyanda","raw_affiliation_strings":["Department of Global Health, Boston University School of Public Health, Boston, Massachusetts"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Global Health, Boston University School of Public Health, Boston, Massachusetts","institution_ids":["https://openalex.org/I111088046"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5053146265","display_name":"Christopher John Gill","orcid":"https://orcid.org/0000-0003-3353-0617","observed_orcids":["https://orcid.org/0000-0003-3353-0617"]},"institutions":[{"id":"https://openalex.org/I111088046","display_name":"Boston University","ror":"https://ror.org/05qwgg493","country_code":"US","type":"education","lineage":["https://openalex.org/I111088046"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Christopher J. Gill","raw_affiliation_strings":["Department of Global Health, Boston University School of Public Health, Boston, Massachusetts"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Global Health, Boston University School of Public Health, Boston, Massachusetts","institution_ids":["https://openalex.org/I111088046"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5051155900","display_name":"William MacLeod","orcid":"https://orcid.org/0000-0001-8003-8874","observed_orcids":["https://orcid.org/0000-0001-8003-8874"]},"institutions":[{"id":"https://openalex.org/I111088046","display_name":"Boston University","ror":"https://ror.org/05qwgg493","country_code":"US","type":"education","lineage":["https://openalex.org/I111088046"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"William B. MacLeod","raw_affiliation_strings":["Department of Global Health, Boston University School of Public Health, Boston, Massachusetts"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Global Health, Boston University School of Public Health, Boston, Massachusetts","institution_ids":["https://openalex.org/I111088046"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5067654120","display_name":"Rachel C Pieciak","orcid":"https://orcid.org/0000-0002-5893-1065","observed_orcids":["https://orcid.org/0000-0002-5893-1065"]},"institutions":[{"id":"https://openalex.org/I111088046","display_name":"Boston University","ror":"https://ror.org/05qwgg493","country_code":"US","type":"education","lineage":["https://openalex.org/I111088046"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Rachel C. Pieciak","raw_affiliation_strings":["Department of Global Health, Boston University School of Public Health, Boston, Massachusetts"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Global Health, Boston University School of Public Health, Boston, Massachusetts","institution_ids":["https://openalex.org/I111088046"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5036251319","display_name":"Rotem Lapidot","orcid":"https://orcid.org/0000-0002-4398-1588","observed_orcids":["https://orcid.org/0000-0002-4398-1588"]},"institutions":[{"id":"https://openalex.org/I111088046","display_name":"Boston University","ror":"https://ror.org/05qwgg493","country_code":"US","type":"education","lineage":["https://openalex.org/I111088046"]},{"id":"https://openalex.org/I1286490081","display_name":"Boston Medical Center","ror":"https://ror.org/010b9wj87","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1286490081"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Rotem Lapidot","raw_affiliation_strings":["Pediatric Infectious Diseases, Boston Medical Center, Boston, Massachusetts","Pediatrics, Boston University School of Medicine, Boston, Massachusetts"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Pediatric Infectious Diseases, Boston Medical Center, Boston, Massachusetts","institution_ids":["https://openalex.org/I1286490081"]},{"raw_affiliation_string":"Pediatrics, Boston University School of Medicine, Boston, Massachusetts","institution_ids":["https://openalex.org/I111088046"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5021633597","display_name":"William Evan Johnson","orcid":"https://orcid.org/0000-0002-6247-6595","observed_orcids":["https://orcid.org/0000-0002-6247-6595"]},"institutions":[{"id":"https://openalex.org/I111088046","display_name":"Boston University","ror":"https://ror.org/05qwgg493","country_code":"US","type":"education","lineage":["https://openalex.org/I111088046"]},{"id":"https://openalex.org/I4402554120","display_name":"Rutgers New Jersey Medical School","ror":"https://ror.org/014ye1258","country_code":"US","type":"education","lineage":["https://openalex.org/I102322142","https://openalex.org/I4390039302","https://openalex.org/I4402554120"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"W. Evan Johnson","raw_affiliation_strings":["Bioinformatics Program, Boston University, Boston, Massachusetts","Division of Infectious Disease, Center for Data Science, Rutgers New Jersey Medical School, Newark, New Jersey"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Bioinformatics Program, Boston University, Boston, Massachusetts","institution_ids":["https://openalex.org/I111088046"]},{"raw_affiliation_string":"Division of Infectious Disease, Center for Data Science, Rutgers New Jersey Medical School, Newark, New Jersey","institution_ids":["https://openalex.org/I4402554120"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5021633597","https://openalex.org/A5036251319","https://openalex.org/A5043357374"],"corresponding_institution_ids":["https://openalex.org/I111088046","https://openalex.org/I1286490081","https://openalex.org/I4402554120"],"apc_list":null,"apc_paid":null,"fwci":0.5619,"has_fulltext":true,"cited_by_count":3,"citation_normalized_percentile":{"value":0.63884432,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":88,"max":94},"biblio":{"volume":"42","issue":"8","first_page":"637","last_page":"643"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11243","display_name":"Respiratory viral infections research","score":0.9965999722480774,"subfield":{"id":"https://openalex.org/subfields/2713","display_name":"Epidemiology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T11243","display_name":"Respiratory viral infections research","score":0.9965999722480774,"subfield":{"id":"https://openalex.org/subfields/2713","display_name":"Epidemiology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T11688","display_name":"Microbial infections and disease research","score":0.0005000000237487257,"subfield":{"id":"https://openalex.org/subfields/2404","display_name":"Microbiology"},"field":{"id":"https://openalex.org/fields/24","display_name":"Immunology and Microbiology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10654","display_name":"Pneumonia and Respiratory Infections","score":0.00039999998989515007,"subfield":{"id":"https://openalex.org/subfields/2713","display_name":"Epidemiology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/respiratory-syncytial-virus","display_name":"respiratory syncytial virus","score":0.9760000109672546},{"id":"https://openalex.org/keywords/nasopharyngeal-microbiota","display_name":"nasopharyngeal microbiota","score":0.9789999723434448},{"id":"https://openalex.org/keywords/infant-mortality","display_name":"infant mortality","score":0.7749999761581421},{"id":"https://openalex.org/keywords/bronchiolitis","display_name":"bronchiolitis","score":0.8610000014305115},{"id":"https://openalex.org/keywords/moraxella","display_name":"Moraxella","score":0.871999979019165},{"id":"https://openalex.org/keywords/gemella","display_name":"Gemella","score":0.9409999847412109},{"id":"https://openalex.org/keywords/staphylococcus","display_name":"Staphylococcus","score":1.0},{"id":"https://openalex.org/keywords/microbial-abundance","display_name":"microbial abundance","score":0.5260000228881836},{"id":"https://openalex.org/keywords/zambia","display_name":"Zambia","score":0.5170000195503235},{"id":"https://openalex.org/keywords/16s-rrna-gene-sequencing","display_name":"16S rRNA gene sequencing","score":0.8059999942779541}],"concepts":[{"id":"https://openalex.org/C143121216","wikidata":"https://www.wikidata.org/wiki/Q1330402","display_name":"Microbiome","level":2,"score":0.6373815536499023},{"id":"https://openalex.org/C534529494","wikidata":"https://www.wikidata.org/wiki/Q7891","display_name":"Respiratory system","level":2,"score":0.5060815215110779},{"id":"https://openalex.org/C2779134260","wikidata":"https://www.wikidata.org/wiki/Q12136","display_name":"Disease","level":2,"score":0.48480167984962463},{"id":"https://openalex.org/C165617652","wikidata":"https://www.wikidata.org/wiki/Q17071134","display_name":"Nested case-control study","level":3,"score":0.45553091168403625},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.453703373670578},{"id":"https://openalex.org/C2522874641","wikidata":"https://www.wikidata.org/wiki/Q808","display_name":"Virus","level":2,"score":0.44069093465805054},{"id":"https://openalex.org/C159047783","wikidata":"https://www.wikidata.org/wiki/Q7215","display_name":"Virology","level":1,"score":0.42183998227119446},{"id":"https://openalex.org/C203014093","wikidata":"https://www.wikidata.org/wiki/Q101929","display_name":"Immunology","level":1,"score":0.3984297513961792},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.3758120536804199},{"id":"https://openalex.org/C146304588","wikidata":"https://www.wikidata.org/wiki/Q961652","display_name":"Case-control study","level":2,"score":0.3130609691143036},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.2971324622631073},{"id":"https://openalex.org/C126322002","wikidata":"https://www.wikidata.org/wiki/Q11180","display_name":"Internal medicine","level":1,"score":0.1310252547264099},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.10345381498336792}],"mesh":[{"descriptor_ui":"D002648","descriptor_name":"Child","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003141","descriptor_name":"Communicable Diseases","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D006760","descriptor_name":"Hospitalization","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007223","descriptor_name":"Infant","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015024","descriptor_name":"Zambia","qualifier_ui":"Q000453","qualifier_name":"epidemiology","is_major_topic":false},{"descriptor_ui":"D016022","descriptor_name":"Case-Control Studies","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018113","descriptor_name":"Respiratory Syncytial Virus, Human","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D018357","descriptor_name":"Respiratory Syncytial Virus Infections","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D064307","descriptor_name":"Microbiota","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":4,"locations":[{"id":"doi:10.1097/inf.0000000000003941","doi":"https://doi.org/10.1097/inf.0000000000003941","is_oa":true,"landing_page_url":"https://doi.org/10.1097/inf.0000000000003941","pdf_url":null,"source":{"id":"https://openalex.org/S109369870","display_name":"The Pediatric Infectious Disease Journal","issn_l":"0891-3668","issn":["0891-3668","1532-0987"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["cwts-core","dongbi-c","doyens","jufo-1","ki-jl-1","medline","norway-1","poland-100","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310315671","host_organization_name":"Lippincott Williams & Wilkins","host_organization_lineage":["https://openalex.org/P4310315671","https://openalex.org/P4310318547"],"host_organization_lineage_names":["Lippincott Williams & Wilkins","Wolters Kluwer"],"type":"journal"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Pediatric Infectious Disease Journal","raw_type":"journal-article"},{"id":"doi:10.1101/2022.12.23.22283745","doi":"https://doi.org/10.1101/2022.12.23.22283745","is_oa":true,"landing_page_url":"https://doi.org/10.1101/2022.12.23.22283745","pdf_url":"https://www.medrxiv.org/content/medrxiv/early/2022/12/26/2022.12.23.22283745.full.pdf","source":{"id":"https://openalex.org/S3005729997","display_name":"medRxiv","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["cwts-core"],"host_organization":null,"host_organization_name":null,"host_organization_lineage":["https://openalex.org/P4310315909"],"host_organization_lineage_names":["Cold Spring Harbor Laboratory Press"],"type":"repository"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"acceptedVersion","is_accepted":true,"is_published":false,"raw_source_name":"medRxiv","raw_type":"posted-content"},{"id":"pmh:oai:pubmedcentral.nih.gov:10348642","doi":null,"is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/10348642","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC10348642/pdf/inf-42-637.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Pediatr Infect Dis J","raw_type":"Text"},{"id":"pmid:37093853","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/37093853","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"The Pediatric infectious disease journal","raw_type":"Journal Article"}],"best_oa_location":{"id":"doi:10.1097/inf.0000000000003941","doi":"https://doi.org/10.1097/inf.0000000000003941","is_oa":true,"landing_page_url":"https://doi.org/10.1097/inf.0000000000003941","pdf_url":null,"source":{"id":"https://openalex.org/S109369870","display_name":"The Pediatric Infectious Disease Journal","issn_l":"0891-3668","issn":["0891-3668","1532-0987"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["cwts-core","dongbi-c","doyens","jufo-1","ki-jl-1","medline","norway-1","poland-100","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310315671","host_organization_name":"Lippincott Williams & Wilkins","host_organization_lineage":["https://openalex.org/P4310315671","https://openalex.org/P4310318547"],"host_organization_lineage_names":["Lippincott Williams & Wilkins","Wolters Kluwer"],"type":"journal"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Pediatric Infectious Disease Journal","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.98580002784729,"display_name":"Good health and well-being","id":"https://metadata.un.org/sdg/3"}],"study_designs":[],"awards":[{"id":"https://openalex.org/G3067281006","display_name":"Signature of profiling and staging the progression of TB from infection to disease.","funder_award_id":"R21AI154387","funder_id":"https://openalex.org/F4320337355","funder_display_name":"National Institute of Allergy and Infectious Diseases"},{"id":"https://openalex.org/G9000904641","display_name":"Removing batch effects in high-throughput biomedical studies","funder_award_id":"R01GM127430","funder_id":"https://openalex.org/F4320337354","funder_display_name":"National Institute of General Medical Sciences"}],"funders":[{"id":"https://openalex.org/F4320337354","display_name":"National Institute of General Medical Sciences","ror":"https://ror.org/04q48ey07"},{"id":"https://openalex.org/F4320337355","display_name":"National Institute of Allergy and Infectious Diseases","ror":"https://ror.org/043z4tv69"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4366817005.pdf","grobid_xml":"https://content.openalex.org/works/W4366817005.grobid-xml"},"referenced_works_count":48,"referenced_works":["https://openalex.org/W1543298386","https://openalex.org/W1987106455","https://openalex.org/W1991669423","https://openalex.org/W1995875735","https://openalex.org/W2025110740","https://openalex.org/W2054167525","https://openalex.org/W2056279562","https://openalex.org/W2060910587","https://openalex.org/W2067643279","https://openalex.org/W2084706776","https://openalex.org/W2087189381","https://openalex.org/W2106533426","https://openalex.org/W2120949068","https://openalex.org/W2131787276","https://openalex.org/W2135445066","https://openalex.org/W2147618390","https://openalex.org/W2149421543","https://openalex.org/W2156975150","https://openalex.org/W2166325326","https://openalex.org/W2301152512","https://openalex.org/W2346069395","https://openalex.org/W2358072345","https://openalex.org/W2493898491","https://openalex.org/W2499292135","https://openalex.org/W2727509207","https://openalex.org/W2783328678","https://openalex.org/W2795510964","https://openalex.org/W2890162123","https://openalex.org/W2895205778","https://openalex.org/W2922158324","https://openalex.org/W2944437597","https://openalex.org/W2945078298","https://openalex.org/W2949901474","https://openalex.org/W3015877343","https://openalex.org/W3025572901","https://openalex.org/W3030441098","https://openalex.org/W3034164354","https://openalex.org/W3087020446","https://openalex.org/W3141939466","https://openalex.org/W3176643945","https://openalex.org/W3206267179","https://openalex.org/W4205382675","https://openalex.org/W4235887661","https://openalex.org/W4240863263","https://openalex.org/W4308916168","https://openalex.org/W4386193794","https://openalex.org/W6723941685","https://openalex.org/W6778459756"],"related_works":["https://openalex.org/W4405067410","https://openalex.org/W3085268924","https://openalex.org/W3025572901","https://openalex.org/W3172964930","https://openalex.org/W2990575530","https://openalex.org/W2981727587","https://openalex.org/W4205382675","https://openalex.org/W2559974100","https://openalex.org/W4385411039","https://openalex.org/W4408279389"],"abstract_inverted_index":{"BACKGROUND:":[0],"Respiratory":[1],"syncytial":[2],"virus":[3],"(RSV)":[4],"is":[5],"the":[6,36,58,121,135,147,162,165,175,189,197,212,223,226,236,253],"most":[7],"common":[8],"cause":[9],"of":[10,23,40,57,93,141,146,169,192,222,238],"bronchiolitis":[11],"and":[12,60,109,124,171,202,229,231,246],"lower":[13,54],"respiratory":[14],"tract":[15],"infections":[16],"in":[17,19,28,62,72,78,120,188,196,207,211,235],"children":[18],"their":[20],"first":[21],"year":[22],"life,":[24],"disproportionately":[25],"affecting":[26],"infants":[27,41,70,97,114,132],"developing":[29],"countries.":[30,80],"Previous":[31],"studies":[32,66],"have":[33,67],"found":[34,182],"that":[35,48,183,233],"nasopharyngeal":[37],"(NP)":[38],"microbiome":[39,167,191,228],"with":[42,50,98,249,252],"RSV":[43,125,230,245],"infection":[44],"has":[45],"specific":[46,243],"characteristics":[47],"correlate":[49,248],"disease":[51],"severity,":[52],"including":[53],"biodiversity,":[55],"perturbations":[56],"microbiota":[59],"differences":[61,163],"relative":[63],"abundance.":[64],"These":[65,216],"focused":[68],"on":[69],"seen":[71],"clinical":[73],"or":[74,137],"hospital":[75],"settings,":[76],"predominantly":[77],"developed":[79],"METHODS:":[81],"We":[82,181],"conducted":[83],"a":[84,90],"nested":[85],"case":[86],"control":[87],"study":[88,149],"within":[89,134,138],"random":[91],"sample":[92],"50":[94,110],"deceased":[95,112],"RSV+":[96,170,193,208],"age":[99],"at":[100],"death":[101],"ranging":[102],"from":[103],"4":[104],"days":[105],"to":[106,244],"6":[107],"months":[108],"matched":[111],"RSV-":[113,172,198,213],"who":[115],"were":[116,204],"all":[117,151],"previously":[118,219],"enrolled":[119],"Zambia":[122],"Pertussis":[123],"Infant":[126],"Mortality":[127],"Estimation":[128],"(ZPRIME)":[129],"study.":[130],"All":[131],"died":[133],"community":[136],"48":[139],"hours":[140],"facility":[142],"admittance.":[143],"As":[144],"part":[145],"ZPRIME":[148],"procedures,":[150],"decedents":[152,173,194,209],"underwent":[153],"one-time,":[154],"postmortem":[155],"NP":[156,166,190,227],"sampling.":[157],"The":[158],"current":[159],"analysis":[160],"explored":[161],"between":[164,225],"profiles":[168],"using":[174],"16S":[176],"ribosomal":[177],"DNA":[178],"sequencing.":[179],"RESULTS:":[180],"Moraxella":[184],"was":[185],"more":[186],"abundant":[187,206],"than":[195,210],"decedents.":[199,214],"Additionally,":[200],"Gemella":[201],"Staphylococcus":[203],"less":[205],"CONCLUSIONS:":[215],"results":[217],"support":[218],"reported":[220],"findings":[221],"association":[224],"suggest":[232],"changes":[234],"abundance":[237],"these":[239],"microbes":[240],"are":[241],"likely":[242],"may":[247],"mortality":[250],"associated":[251],"disease.":[254]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":1}],"updated_date":"2026-11-04T10:54:05.112534","created_date":"2023-04-25T00:00:00"}
