{"id":"https://openalex.org/W4361876940","doi":"https://doi.org/10.1158/0008-5472.22411650","title":"Supplementary Methods and References from Identification of MYC-Dependent Transcriptional Programs in Oncogene-Addicted Liver Tumors","display_name":"Supplementary Methods and References from Identification of MYC-Dependent Transcriptional Programs in Oncogene-Addicted Liver Tumors","publication_year":2023,"publication_date":"2023-03-31","ids":{"openalex":"https://openalex.org/W4361876940","doi":"https://doi.org/10.1158/0008-5472.22411650"},"language":"en","primary_location":{"id":"doi:10.1158/0008-5472.22411650","doi":"https://doi.org/10.1158/0008-5472.22411650","is_oa":true,"landing_page_url":"https://doi.org/10.1158/0008-5472.22411650","pdf_url":null,"source":null,"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"acceptedVersion","is_accepted":true,"is_published":false,"raw_source_name":"American Association for Cancer Research","raw_type":"posted-content"},"volume":null,"type":"supplementary-materials","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://doi.org/10.1158/0008-5472.22411650","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5110967393","display_name":"Theresia R. Kress","orcid":null,"observed_orcids":[]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Theresia R. Kress","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5036897614","display_name":"Paola Pellanda","orcid":"https://orcid.org/0000-0002-7494-8334","observed_orcids":["https://orcid.org/0000-0002-7494-8334"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Paola Pellanda","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5009698399","display_name":"Luca Pellegrinet","orcid":"https://orcid.org/0000-0003-2081-8531","observed_orcids":["https://orcid.org/0000-0003-2081-8531"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Luca Pellegrinet","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5085896954","display_name":"Valerio Bianchi","orcid":"https://orcid.org/0000-0001-9025-7923","observed_orcids":["https://orcid.org/0000-0001-9025-7923"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Valerio Bianchi","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5015568698","display_name":"Paola Nicoli","orcid":"https://orcid.org/0000-0002-6284-1839","observed_orcids":["https://orcid.org/0000-0002-6284-1839"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Paola Nicoli","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5073541194","display_name":"Mirko Doni","orcid":"https://orcid.org/0000-0001-7099-2701","observed_orcids":["https://orcid.org/0000-0001-7099-2701"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Mirko Doni","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5090326151","display_name":"Camilla Recordati","orcid":"https://orcid.org/0000-0002-7172-9662","observed_orcids":["https://orcid.org/0000-0002-7172-9662"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Camilla Recordati","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5058937103","display_name":"Salvatore Bianchi","orcid":"https://orcid.org/0009-0009-7383-9732","observed_orcids":["https://orcid.org/0009-0009-7383-9732"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Salvatore Bianchi","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5026698342","display_name":"Luca Rotta","orcid":"https://orcid.org/0000-0001-6915-1120","observed_orcids":["https://orcid.org/0000-0001-6915-1120"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Luca Rotta","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5030754377","display_name":"Thelma Capra","orcid":null,"observed_orcids":[]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Thelma Capra","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5071842065","display_name":"Micol Rav\u00e0","orcid":"https://orcid.org/0000-0001-7606-8368","observed_orcids":["https://orcid.org/0000-0001-7606-8368"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Micol Rav\u00e0","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5073844034","display_name":"Alessandro Verrecchia","orcid":"https://orcid.org/0000-0002-8596-6650","observed_orcids":["https://orcid.org/0000-0002-8596-6650"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Alessandro Verrecchia","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5016391982","display_name":"Enrico Radaelli","orcid":"https://orcid.org/0000-0002-2885-0221","observed_orcids":["https://orcid.org/0000-0002-2885-0221"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Enrico Radaelli","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5043387899","display_name":"Trevor D. Littlewood","orcid":"https://orcid.org/0000-0003-3475-1462","observed_orcids":["https://orcid.org/0000-0003-3475-1462"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Trevor D. Littlewood","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5042437588","display_name":"G\u00e9rard I. Evan","orcid":"https://orcid.org/0000-0003-0412-1216","observed_orcids":["https://orcid.org/0000-0003-0412-1216"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Gerard I. Evan","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"last","author":{"id":"https://openalex.org/A5036162019","display_name":"Bruno B. Amati","orcid":"https://orcid.org/0000-0002-2958-1799","observed_orcids":["https://orcid.org/0000-0002-2958-1799"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Bruno Amati","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]}],"institutions":[],"countries_distinct_count":0,"institutions_distinct_count":0,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12820","display_name":"Chromatin Remodeling and Cancer","score":0.16419999301433563,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12820","display_name":"Chromatin Remodeling and Cancer","score":0.16419999301433563,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10073","display_name":"Hepatocellular Carcinoma Treatment and Prognosis","score":0.1509999930858612,"subfield":{"id":"https://openalex.org/subfields/2721","display_name":"Hepatology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10222","display_name":"Genomics and Chromatin Dynamics","score":0.12070000171661377,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/c-myc","display_name":"c-Myc","score":0.9520000219345093},{"id":"https://openalex.org/keywords/transcriptional-programs","display_name":"transcriptional programs","score":0.8830000162124634},{"id":"https://openalex.org/keywords/liver-tumors","display_name":"liver tumors","score":0.7369999885559082},{"id":"https://openalex.org/keywords/oncogene-addiction","display_name":"oncogene addiction","score":0.9490000009536743},{"id":"https://openalex.org/keywords/hepatocellular-carcinoma","display_name":"hepatocellular carcinoma","score":0.7870000004768372},{"id":"https://openalex.org/keywords/gene-expression-profiling","display_name":"gene expression profiling","score":0.4230000078678131}],"concepts":[{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.7207170128822327},{"id":"https://openalex.org/C2781018059","wikidata":"https://www.wikidata.org/wiki/Q207609","display_name":"Oncogene","level":4,"score":0.5668321847915649},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.4986722469329834},{"id":"https://openalex.org/C502942594","wikidata":"https://www.wikidata.org/wiki/Q3421914","display_name":"Cancer research","level":1,"score":0.41521143913269043},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.33129340410232544},{"id":"https://openalex.org/C15744967","wikidata":"https://www.wikidata.org/wiki/Q9418","display_name":"Psychology","level":0,"score":0.327312707901001},{"id":"https://openalex.org/C126322002","wikidata":"https://www.wikidata.org/wiki/Q11180","display_name":"Internal medicine","level":1,"score":0.29700759053230286},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.27585726976394653},{"id":"https://openalex.org/C121608353","wikidata":"https://www.wikidata.org/wiki/Q12078","display_name":"Cancer","level":2,"score":0.1577780544757843},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.0},{"id":"https://openalex.org/C29537977","wikidata":"https://www.wikidata.org/wiki/Q188941","display_name":"Cell cycle","level":3,"score":0.0}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1158/0008-5472.22411650","doi":"https://doi.org/10.1158/0008-5472.22411650","is_oa":true,"landing_page_url":"https://doi.org/10.1158/0008-5472.22411650","pdf_url":null,"source":null,"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"acceptedVersion","is_accepted":true,"is_published":false,"raw_source_name":"American Association for Cancer Research","raw_type":"posted-content"},{"id":"doi:10.1158/0008-5472.22411650.v1","doi":"https://doi.org/10.1158/0008-5472.22411650.v1","is_oa":true,"landing_page_url":"https://doi.org/10.1158/0008-5472.22411650.v1","pdf_url":null,"source":null,"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"acceptedVersion","is_accepted":true,"is_published":false,"raw_source_name":"American Association for Cancer Research","raw_type":"posted-content"},{"id":"pmh:oai:figshare.com:article/22411650","doi":null,"is_oa":true,"landing_page_url":"https://figshare.com/articles/journal_contribution/Supplementary_Methods_and_References_from_Identification_of_MYC-Dependent_Transcriptional_Programs_in_Oncogene-Addicted_Liver_Tumors/22411650","pdf_url":null,"source":{"id":"https://openalex.org/S4377196282","display_name":"Figshare","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I4210132348","host_organization_name":"Figshare (United Kingdom)","host_organization_lineage":["https://openalex.org/I4210132348"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1158/0008-5472.22411650","doi":"https://doi.org/10.1158/0008-5472.22411650","is_oa":true,"landing_page_url":"https://doi.org/10.1158/0008-5472.22411650","pdf_url":null,"source":null,"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"acceptedVersion","is_accepted":true,"is_published":false,"raw_source_name":"American Association for Cancer Research","raw_type":"posted-content"},"sustainable_development_goals":[{"score":0.46810001134872437,"display_name":"Good health and well-being","id":"https://metadata.un.org/sdg/3"}],"study_designs":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":0,"referenced_works":[],"related_works":["https://openalex.org/W4361827112","https://openalex.org/W2339244615","https://openalex.org/W2288922715","https://openalex.org/W6922238429","https://openalex.org/W2011378554","https://openalex.org/W4387608981","https://openalex.org/W2439543196","https://openalex.org/W4241907230","https://openalex.org/W2141688229","https://openalex.org/W7197216093"],"abstract_inverted_index":{"Description":[0],"of":[1],"additional":[2],"methods":[3],"and":[4],"procedures":[5],"used":[6],"in":[7],"the":[8],"study.":[9],"Also":[10],"includes":[11],"Supplementary":[12],"References.":[13]},"counts_by_year":[],"updated_date":"2026-11-04T10:54:05.112534","created_date":"2023-04-05T00:00:00"}