{"id":"https://openalex.org/W4311569732","doi":"https://doi.org/10.1101/2022.12.15.520197","title":"Understanding the mechanism of the SARS CoV-2 coinfection with other respiratory viruses","display_name":"Understanding the mechanism of the SARS CoV-2 coinfection with other respiratory viruses","publication_year":2022,"publication_date":"2022-12-15","ids":{"openalex":"https://openalex.org/W4311569732","doi":"https://doi.org/10.1101/2022.12.15.520197"},"language":"en","primary_location":{"id":"doi:10.1101/2022.12.15.520197","doi":"https://doi.org/10.1101/2022.12.15.520197","is_oa":true,"landing_page_url":"https://doi.org/10.1101/2022.12.15.520197","pdf_url":"https://www.biorxiv.org/content/biorxiv/early/2022/12/15/2022.12.15.520197.full.pdf","source":{"id":"https://openalex.org/S4306402567","display_name":"bioRxiv (Cold Spring Harbor Laboratory)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I2750212522","host_organization_name":"Cold Spring Harbor Laboratory","host_organization_lineage":["https://openalex.org/I2750212522"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"bioRxiv","raw_type":"posted-content"},"volume":null,"type":"preprint","is_traditional":true,"indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://www.biorxiv.org/content/biorxiv/early/2022/12/15/2022.12.15.520197.full.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5016451527","display_name":"Kalaiarasan Ponnusamy","orcid":"https://orcid.org/0000-0002-4913-2237","observed_orcids":["https://orcid.org/0000-0002-4913-2237"]},"institutions":[{"id":"https://openalex.org/I103004294","display_name":"National Center for Disease Control","ror":"https://ror.org/01ks7f963","country_code":"IN","type":"government","lineage":["https://openalex.org/I103004294","https://openalex.org/I2799351866","https://openalex.org/I4210148677"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Kalaiarasan Ponnusamy","raw_affiliation_strings":["Biotechnology Division, National Centre for Disease Control, Delhi"],"raw_orcid":"https://orcid.org/0000-0002-4913-2237","affiliations":[{"raw_affiliation_string":"Biotechnology Division, National Centre for Disease Control, Delhi","institution_ids":["https://openalex.org/I103004294"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5107996619","display_name":"Radhakrishnan VS","orcid":"https://orcid.org/0000-0002-3443-526X","observed_orcids":["https://orcid.org/0000-0002-3443-526X"]},"institutions":[{"id":"https://openalex.org/I103004294","display_name":"National Center for Disease Control","ror":"https://ror.org/01ks7f963","country_code":"IN","type":"government","lineage":["https://openalex.org/I103004294","https://openalex.org/I2799351866","https://openalex.org/I4210148677"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"RadhaKrishnan Venkatraman Srinivasan","raw_affiliation_strings":["Biotechnology Division, National Centre for Disease Control, Delhi"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Biotechnology Division, National Centre for Disease Control, Delhi","institution_ids":["https://openalex.org/I103004294"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5091620514","display_name":"Robin Marwal","orcid":"https://orcid.org/0000-0002-8314-1743","observed_orcids":["https://orcid.org/0000-0002-8314-1743"]},"institutions":[{"id":"https://openalex.org/I103004294","display_name":"National Center for Disease Control","ror":"https://ror.org/01ks7f963","country_code":"IN","type":"government","lineage":["https://openalex.org/I103004294","https://openalex.org/I2799351866","https://openalex.org/I4210148677"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Robin Marwal","raw_affiliation_strings":["Biotechnology Division, National Centre for Disease Control, Delhi"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Biotechnology Division, National Centre for Disease Control, Delhi","institution_ids":["https://openalex.org/I103004294"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5064257672","display_name":"Meena Datta","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I103004294","display_name":"National Center for Disease Control","ror":"https://ror.org/01ks7f963","country_code":"IN","type":"government","lineage":["https://openalex.org/I103004294","https://openalex.org/I2799351866","https://openalex.org/I4210148677"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Meena Datta","raw_affiliation_strings":["Biotechnology Division, National Centre for Disease Control, Delhi"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Biotechnology Division, National Centre for Disease Control, Delhi","institution_ids":["https://openalex.org/I103004294"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5027185597","display_name":"Mahesh Shanker Dhar","orcid":"https://orcid.org/0000-0002-2006-3581","observed_orcids":["https://orcid.org/0000-0002-2006-3581"]},"institutions":[{"id":"https://openalex.org/I103004294","display_name":"National Center for Disease Control","ror":"https://ror.org/01ks7f963","country_code":"IN","type":"government","lineage":["https://openalex.org/I103004294","https://openalex.org/I2799351866","https://openalex.org/I4210148677"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Mahesh Shankar Dhar","raw_affiliation_strings":["Biotechnology Division, National Centre for Disease Control, Delhi"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Biotechnology Division, National Centre for Disease Control, Delhi","institution_ids":["https://openalex.org/I103004294"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5023088884","display_name":"Urmila Chaudhary","orcid":"https://orcid.org/0000-0003-1509-5164","observed_orcids":["https://orcid.org/0000-0003-1509-5164"]},"institutions":[{"id":"https://openalex.org/I103004294","display_name":"National Center for Disease Control","ror":"https://ror.org/01ks7f963","country_code":"IN","type":"government","lineage":["https://openalex.org/I103004294","https://openalex.org/I2799351866","https://openalex.org/I4210148677"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Urmila Chaudhary","raw_affiliation_strings":["Biotechnology Division, National Centre for Disease Control, Delhi"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Biotechnology Division, National Centre for Disease Control, Delhi","institution_ids":["https://openalex.org/I103004294"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5106444671","display_name":"Uma Sharma","orcid":"https://orcid.org/0000-0003-2276-6958","observed_orcids":["https://orcid.org/0000-0003-2276-6958"]},"institutions":[{"id":"https://openalex.org/I103004294","display_name":"National Center for Disease Control","ror":"https://ror.org/01ks7f963","country_code":"IN","type":"government","lineage":["https://openalex.org/I103004294","https://openalex.org/I2799351866","https://openalex.org/I4210148677"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Uma Sharma","raw_affiliation_strings":["Biotechnology Division, National Centre for Disease Control, Delhi"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Biotechnology Division, National Centre for Disease Control, Delhi","institution_ids":["https://openalex.org/I103004294"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5051528562","display_name":"Swati Kumari","orcid":"https://orcid.org/0000-0002-0937-4960","observed_orcids":["https://orcid.org/0000-0002-0937-4960"]},"institutions":[{"id":"https://openalex.org/I103004294","display_name":"National Center for Disease Control","ror":"https://ror.org/01ks7f963","country_code":"IN","type":"government","lineage":["https://openalex.org/I103004294","https://openalex.org/I2799351866","https://openalex.org/I4210148677"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Swati Kumari","raw_affiliation_strings":["Biotechnology Division, National Centre for Disease Control, Delhi"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Biotechnology Division, National Centre for Disease Control, Delhi","institution_ids":["https://openalex.org/I103004294"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Kalpana Sharma","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I103004294","display_name":"National Center for Disease Control","ror":"https://ror.org/01ks7f963","country_code":"IN","type":"government","lineage":["https://openalex.org/I103004294","https://openalex.org/I2799351866","https://openalex.org/I4210148677"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Kalpana Sharma","raw_affiliation_strings":["Biotechnology Division, National Centre for Disease Control, Delhi"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Biotechnology Division, National Centre for Disease Control, Delhi","institution_ids":["https://openalex.org/I103004294"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5065786673","display_name":"Hema Gogia","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I103004294","display_name":"National Center for Disease Control","ror":"https://ror.org/01ks7f963","country_code":"IN","type":"government","lineage":["https://openalex.org/I103004294","https://openalex.org/I2799351866","https://openalex.org/I4210148677"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Hema Gogia","raw_affiliation_strings":["Biotechnology Division, National Centre for Disease Control, Delhi"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Biotechnology Division, National Centre for Disease Control, Delhi","institution_ids":["https://openalex.org/I103004294"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5002020825","display_name":"Preeti Madan","orcid":"https://orcid.org/0000-0002-9146-7049","observed_orcids":["https://orcid.org/0000-0002-9146-7049"]},"institutions":[{"id":"https://openalex.org/I103004294","display_name":"National Center for Disease Control","ror":"https://ror.org/01ks7f963","country_code":"IN","type":"government","lineage":["https://openalex.org/I103004294","https://openalex.org/I2799351866","https://openalex.org/I4210148677"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Preeti Madan","raw_affiliation_strings":["Biotechnology Division, National Centre for Disease Control, Delhi"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Biotechnology Division, National Centre for Disease Control, Delhi","institution_ids":["https://openalex.org/I103004294"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5048971076","display_name":"Sandhya Kabra","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I103004294","display_name":"National Center for Disease Control","ror":"https://ror.org/01ks7f963","country_code":"IN","type":"government","lineage":["https://openalex.org/I103004294","https://openalex.org/I2799351866","https://openalex.org/I4210148677"]}],"countries":["IN"],"is_corresponding":true,"raw_author_name":"Sandhya Kabra","raw_affiliation_strings":["Biotechnology Division, National Centre for Disease Control, Delhi"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Biotechnology Division, National Centre for Disease Control, Delhi","institution_ids":["https://openalex.org/I103004294"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5004877275","display_name":"Partha Rakshit","orcid":"https://orcid.org/0000-0002-8285-1479","observed_orcids":["https://orcid.org/0000-0002-8285-1479"]},"institutions":[{"id":"https://openalex.org/I103004294","display_name":"National Center for Disease Control","ror":"https://ror.org/01ks7f963","country_code":"IN","type":"government","lineage":["https://openalex.org/I103004294","https://openalex.org/I2799351866","https://openalex.org/I4210148677"]}],"countries":["IN"],"is_corresponding":true,"raw_author_name":"Partha Rakshit","raw_affiliation_strings":["Biotechnology Division, National Centre for Disease Control, Delhi"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Biotechnology Division, National Centre for Disease Control, Delhi","institution_ids":["https://openalex.org/I103004294"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":["https://openalex.org/A5004877275","https://openalex.org/A5048971076"],"corresponding_institution_ids":["https://openalex.org/I103004294"],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":true,"cited_by_count":0,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11243","display_name":"Respiratory viral infections research","score":0.7103999853134155,"subfield":{"id":"https://openalex.org/subfields/2713","display_name":"Epidemiology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T11243","display_name":"Respiratory viral infections research","score":0.7103999853134155,"subfield":{"id":"https://openalex.org/subfields/2713","display_name":"Epidemiology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10041","display_name":"COVID-19 Clinical Research Studies","score":0.23280000686645508,"subfield":{"id":"https://openalex.org/subfields/2725","display_name":"Infectious Diseases"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10118","display_name":"SARS-CoV-2 and COVID-19 Research","score":0.02280000038444996,"subfield":{"id":"https://openalex.org/subfields/2725","display_name":"Infectious Diseases"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/sars-cov-2","display_name":"SARS-CoV-2","score":0.9879999756813049},{"id":"https://openalex.org/keywords/covid-19","display_name":"COVID-19 pandemic","score":0.9350000023841858},{"id":"https://openalex.org/keywords/viral-coinfection","display_name":"viral coinfection","score":0.9520000219345093},{"id":"https://openalex.org/keywords/respiratory-viruses","display_name":"respiratory viruses","score":0.9810000061988831},{"id":"https://openalex.org/keywords/co-circulation","display_name":"co-circulation","score":0.7260000109672546},{"id":"https://openalex.org/keywords/rapid-diagnostic-tests","display_name":"rapid diagnostic tests","score":0.6830000281333923}],"concepts":[{"id":"https://openalex.org/C2777813720","wikidata":"https://www.wikidata.org/wiki/Q1243018","display_name":"Coinfection","level":3,"score":0.9714789390563965},{"id":"https://openalex.org/C89623803","wikidata":"https://www.wikidata.org/wiki/Q12184","display_name":"Pandemic","level":5,"score":0.7479317784309387},{"id":"https://openalex.org/C534529494","wikidata":"https://www.wikidata.org/wiki/Q7891","display_name":"Respiratory system","level":2,"score":0.6322320103645325},{"id":"https://openalex.org/C3008058167","wikidata":"https://www.wikidata.org/wiki/Q84263196","display_name":"Coronavirus disease 2019 (COVID-19)","level":4,"score":0.6000139713287354},{"id":"https://openalex.org/C159047783","wikidata":"https://www.wikidata.org/wiki/Q7215","display_name":"Virology","level":1,"score":0.5328564643859863},{"id":"https://openalex.org/C3007834351","wikidata":"https://www.wikidata.org/wiki/Q82069695","display_name":"Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2)","level":5,"score":0.5086303949356079},{"id":"https://openalex.org/C2522874641","wikidata":"https://www.wikidata.org/wiki/Q808","display_name":"Virus","level":2,"score":0.49223533272743225},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.4114590883255005},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.39905327558517456},{"id":"https://openalex.org/C203014093","wikidata":"https://www.wikidata.org/wiki/Q101929","display_name":"Immunology","level":1,"score":0.3744015097618103},{"id":"https://openalex.org/C177713679","wikidata":"https://www.wikidata.org/wiki/Q679690","display_name":"Intensive care medicine","level":1,"score":0.34451258182525635},{"id":"https://openalex.org/C126322002","wikidata":"https://www.wikidata.org/wiki/Q11180","display_name":"Internal medicine","level":1,"score":0.20510923862457275},{"id":"https://openalex.org/C2779134260","wikidata":"https://www.wikidata.org/wiki/Q12136","display_name":"Disease","level":2,"score":0.09174621105194092},{"id":"https://openalex.org/C524204448","wikidata":"https://www.wikidata.org/wiki/Q788926","display_name":"Infectious disease (medical specialty)","level":3,"score":0.07961183786392212}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1101/2022.12.15.520197","doi":"https://doi.org/10.1101/2022.12.15.520197","is_oa":true,"landing_page_url":"https://doi.org/10.1101/2022.12.15.520197","pdf_url":"https://www.biorxiv.org/content/biorxiv/early/2022/12/15/2022.12.15.520197.full.pdf","source":{"id":"https://openalex.org/S4306402567","display_name":"bioRxiv (Cold Spring Harbor Laboratory)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I2750212522","host_organization_name":"Cold Spring Harbor Laboratory","host_organization_lineage":["https://openalex.org/I2750212522"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"bioRxiv","raw_type":"posted-content"}],"best_oa_location":{"id":"doi:10.1101/2022.12.15.520197","doi":"https://doi.org/10.1101/2022.12.15.520197","is_oa":true,"landing_page_url":"https://doi.org/10.1101/2022.12.15.520197","pdf_url":"https://www.biorxiv.org/content/biorxiv/early/2022/12/15/2022.12.15.520197.full.pdf","source":{"id":"https://openalex.org/S4306402567","display_name":"bioRxiv (Cold Spring Harbor Laboratory)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I2750212522","host_organization_name":"Cold Spring Harbor Laboratory","host_organization_lineage":["https://openalex.org/I2750212522"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"bioRxiv","raw_type":"posted-content"},"sustainable_development_goals":[{"score":0.9537000060081482,"id":"https://metadata.un.org/sdg/3","display_name":"Good health and well-being"}],"study_designs":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320324333","display_name":"Ministry of Health and Family Welfare","ror":"https://ror.org/04pqetg36"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4311569732.pdf","grobid_xml":"https://content.openalex.org/works/W4311569732.grobid-xml"},"referenced_works_count":13,"referenced_works":["https://openalex.org/W2121546207","https://openalex.org/W3012156253","https://openalex.org/W3045933137","https://openalex.org/W3080903776","https://openalex.org/W3107118294","https://openalex.org/W3169938151","https://openalex.org/W3185090567","https://openalex.org/W3192215430","https://openalex.org/W3193229779","https://openalex.org/W3212689303","https://openalex.org/W4200497893","https://openalex.org/W4283768572","https://openalex.org/W4306795463"],"related_works":["https://openalex.org/W3197357982","https://openalex.org/W4200025513","https://openalex.org/W4281644765","https://openalex.org/W4409869993","https://openalex.org/W4401848032","https://openalex.org/W4200631705","https://openalex.org/W3162611735","https://openalex.org/W3183473281","https://openalex.org/W3040604774","https://openalex.org/W4402813499"],"abstract_inverted_index":{"Abstract":[0],"Coinfections":[1],"have":[2,74],"a":[3,33],"potential":[4],"role":[5],"in":[6,24,42,68,93,102,120,143],"increased":[7],"morbidity":[8],"and":[9],"mortality":[10],"rates":[11],"during":[12],"pandemics.":[13],"Our":[14],"investigation":[15],"is":[16,49],"aimed":[17],"at":[18],"evaluating":[19],"the":[20,43,56,85,109,118,129,132,139,144],"viral":[21,114,123],"coinfection":[22,88],"prevalence":[23],"COVID-19":[25,61,133],"patients.":[26],"Rapid":[27],"diagnostic":[28],"tests":[29],"are":[30],"tools":[31],"with":[32,66,113],"paramount":[34],"impact":[35],"both":[36],"on":[37],"improving":[38],"patient":[39],"care.":[40],"Particularly":[41],"case":[44],"of":[45,50,58,87,89,99,111,131,147],"respiratory":[46,69,91,148],"infections,":[47],"it":[48],"great":[51],"importance":[52],"to":[53],"quickly":[54],"confirm/exclude":[55],"involvement":[57],"pathogens.":[59],"The":[60,105],"pandemic":[62],"has":[63],"been":[64],"associated":[65],"changes":[67,121],"virus":[70,77],"infections":[71],"worldwide,":[72],"which":[73],"differed":[75],"between":[76,122],"types.":[78],"In":[79],"this":[80],"paper,":[81],"we":[82,135],"systematically":[83],"searched":[84],"percentage":[86],"various":[90],"viruses":[92],"COVID-19-positive":[94],"samples.":[95],"We":[96],"included":[97],"patients":[98,112],"all":[100,103],"ages,":[101],"settings.":[104],"main":[106],"outcome":[107],"was":[108],"proportion":[110],"coinfection.":[115],"By":[116],"describing":[117],"differences":[119],"species":[124],"across":[125],"different":[126],"geographies":[127],"over":[128],"course":[130],"pandemic,":[134],"may":[136],"better":[137],"understand":[138],"complex":[140],"factors":[141],"involved":[142],"community":[145],"cocirculation":[146],"viruses.":[149]},"counts_by_year":[],"updated_date":"2026-11-09T13:22:03.289127","created_date":"2022-12-27T00:00:00"}