{"id":"https://openalex.org/W4283769006","doi":"https://doi.org/10.1093/plcell/koac199","title":"The maize gene maternal derepression of r1 encodes a DNA glycosylase that demethylates DNA and reduces siRNA expression in the endosperm","display_name":"The maize gene maternal derepression of r1 encodes a DNA glycosylase that demethylates DNA and reduces siRNA expression in the endosperm","publication_year":2022,"publication_date":"2022-07-01","ids":{"openalex":"https://openalex.org/W4283769006","doi":"https://doi.org/10.1093/plcell/koac199","pmid":"https://pubmed.ncbi.nlm.nih.gov/35775949","pmcid":"https://www.ncbi.nlm.nih.gov/pmc/articles/9516051"},"language":"en","primary_location":{"id":"doi:10.1093/plcell/koac199","doi":"https://doi.org/10.1093/plcell/koac199","is_oa":true,"landing_page_url":"https://doi.org/10.1093/plcell/koac199","pdf_url":"https://academic.oup.com/plcell/article-pdf/34/10/3685/46168331/koac199.pdf","source":{"id":"https://openalex.org/S48849333","display_name":"The Plant Cell","issn_l":"1040-4651","issn":["1040-4651","1532-298X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["cwts-core","dongbi-a","jufo-3","ki-jl-2","medline","norway-2","poland-200","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"The Plant Cell","raw_type":"journal-article"},"volume":null,"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://academic.oup.com/plcell/article-pdf/34/10/3685/46168331/koac199.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5032237809","display_name":"Jonathan Isaiah Gent","orcid":"https://orcid.org/0000-0002-3584-7717","observed_orcids":["https://orcid.org/0000-0002-3584-7717"]},"institutions":[{"id":"https://openalex.org/I165733156","display_name":"University of Georgia","ror":"https://ror.org/00te3t702","country_code":"US","type":"education","lineage":["https://openalex.org/I165733156"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Jonathan I Gent","raw_affiliation_strings":["Department of Plant Biology, University of Georgia , Athens, Georgia 30602, USA"],"raw_orcid":"https://orcid.org/0000-0002-3584-7717","affiliations":[{"raw_affiliation_string":"Department of Plant Biology, University of Georgia , Athens, Georgia 30602, USA","institution_ids":["https://openalex.org/I165733156"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5075578490","display_name":"Kaitlin Higgins","orcid":"https://orcid.org/0000-0001-7759-4386","observed_orcids":["https://orcid.org/0000-0001-7759-4386"]},"institutions":[{"id":"https://openalex.org/I173911158","display_name":"Iowa State University","ror":"https://ror.org/04rswrd78","country_code":"US","type":"education","lineage":["https://openalex.org/I173911158"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Kaitlin M Higgins","raw_affiliation_strings":["Department of Genetics, Development, and Cell Biology, Iowa State University , Ames, Iowa 50011, USA"],"raw_orcid":"https://orcid.org/0000-0001-7759-4386","affiliations":[{"raw_affiliation_string":"Department of Genetics, Development, and Cell Biology, Iowa State University , Ames, Iowa 50011, USA","institution_ids":["https://openalex.org/I173911158"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5039033802","display_name":"Kyle W Swentowsky","orcid":"https://orcid.org/0000-0002-5148-3642","observed_orcids":["https://orcid.org/0000-0002-5148-3642"]},"institutions":[{"id":"https://openalex.org/I165733156","display_name":"University of Georgia","ror":"https://ror.org/00te3t702","country_code":"US","type":"education","lineage":["https://openalex.org/I165733156"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Kyle W Swentowsky","raw_affiliation_strings":["Department of Plant Biology, University of Georgia , Athens, Georgia 30602, USA"],"raw_orcid":"https://orcid.org/0000-0002-5148-3642","affiliations":[{"raw_affiliation_string":"Department of Plant Biology, University of Georgia , Athens, Georgia 30602, USA","institution_ids":["https://openalex.org/I165733156"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5024735253","display_name":"Fangfang Fu","orcid":"https://orcid.org/0000-0002-3187-9308","observed_orcids":["https://orcid.org/0000-0002-3187-9308"]},"institutions":[{"id":"https://openalex.org/I165733156","display_name":"University of Georgia","ror":"https://ror.org/00te3t702","country_code":"US","type":"education","lineage":["https://openalex.org/I165733156"]},{"id":"https://openalex.org/I167027274","display_name":"Nanjing Forestry University","ror":"https://ror.org/03m96p165","country_code":"CN","type":"education","lineage":["https://openalex.org/I167027274"]}],"countries":["CN","US"],"is_corresponding":false,"raw_author_name":"Fang-Fang Fu","raw_affiliation_strings":["Co-Innovation Center for Sustainable Forestry in Southern China, College of Forestry, Nanjing Forestry University , Nanjing 210037, China","Department of Plant Biology, University of Georgia , Athens, Georgia 30602, USA"],"raw_orcid":"https://orcid.org/0000-0002-3187-9308","affiliations":[{"raw_affiliation_string":"Co-Innovation Center for Sustainable Forestry in Southern China, College of Forestry, Nanjing Forestry University , Nanjing 210037, China","institution_ids":["https://openalex.org/I167027274"]},{"raw_affiliation_string":"Department of Plant Biology, University of Georgia , Athens, Georgia 30602, USA","institution_ids":["https://openalex.org/I165733156"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5079292064","display_name":"Yibing Zeng","orcid":"https://orcid.org/0000-0001-5538-2550","observed_orcids":["https://orcid.org/0000-0001-5538-2550"]},"institutions":[{"id":"https://openalex.org/I165733156","display_name":"University of Georgia","ror":"https://ror.org/00te3t702","country_code":"US","type":"education","lineage":["https://openalex.org/I165733156"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Yibing Zeng","raw_affiliation_strings":["Department of Genetics, University of Georgia , Athens, Georgia 30602, USA"],"raw_orcid":"https://orcid.org/0000-0001-5538-2550","affiliations":[{"raw_affiliation_string":"Department of Genetics, University of Georgia , Athens, Georgia 30602, USA","institution_ids":["https://openalex.org/I165733156"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5049153887","display_name":"Dong won Kim","orcid":"https://orcid.org/0000-0001-7286-0171","observed_orcids":["https://orcid.org/0000-0001-7286-0171"]},"institutions":[{"id":"https://openalex.org/I165733156","display_name":"University of Georgia","ror":"https://ror.org/00te3t702","country_code":"US","type":"education","lineage":["https://openalex.org/I165733156"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Dong won Kim","raw_affiliation_strings":["Department of Plant Biology, University of Georgia , Athens, Georgia 30602, USA"],"raw_orcid":"https://orcid.org/0000-0001-7286-0171","affiliations":[{"raw_affiliation_string":"Department of Plant Biology, University of Georgia , Athens, Georgia 30602, USA","institution_ids":["https://openalex.org/I165733156"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5002828396","display_name":"R. Kelly Dawe","orcid":"https://orcid.org/0000-0003-3407-4553","observed_orcids":["https://orcid.org/0000-0003-3407-4553"]},"institutions":[{"id":"https://openalex.org/I165733156","display_name":"University of Georgia","ror":"https://ror.org/00te3t702","country_code":"US","type":"education","lineage":["https://openalex.org/I165733156"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"R Kelly Dawe","raw_affiliation_strings":["Department of Genetics, University of Georgia , Athens, Georgia 30602, USA","Department of Plant Biology, University of Georgia , Athens, Georgia 30602, USA"],"raw_orcid":"https://orcid.org/0000-0003-3407-4553","affiliations":[{"raw_affiliation_string":"Department of Genetics, University of Georgia , Athens, Georgia 30602, USA","institution_ids":["https://openalex.org/I165733156"]},{"raw_affiliation_string":"Department of Plant Biology, University of Georgia , Athens, Georgia 30602, USA","institution_ids":["https://openalex.org/I165733156"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5023378154","display_name":"Nathan M. Springer","orcid":"https://orcid.org/0000-0002-7301-4759","observed_orcids":["https://orcid.org/0000-0002-7301-4759"]},"institutions":[{"id":"https://openalex.org/I130238516","display_name":"University of Minnesota","ror":"https://ror.org/017zqws13","country_code":"US","type":"education","lineage":["https://openalex.org/I130238516"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Nathan M Springer","raw_affiliation_strings":["Department of Plant and Microbial Biology, University of Minnesota , Saint Paul, Minnesota 55108, USA"],"raw_orcid":"https://orcid.org/0000-0002-7301-4759","affiliations":[{"raw_affiliation_string":"Department of Plant and Microbial Biology, University of Minnesota , Saint Paul, Minnesota 55108, USA","institution_ids":["https://openalex.org/I130238516"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5007186211","display_name":"Sarah N. Anderson","orcid":"https://orcid.org/0000-0002-1671-2286","observed_orcids":["https://orcid.org/0000-0002-1671-2286"]},"institutions":[{"id":"https://openalex.org/I173911158","display_name":"Iowa State University","ror":"https://ror.org/04rswrd78","country_code":"US","type":"education","lineage":["https://openalex.org/I173911158"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Sarah N Anderson","raw_affiliation_strings":["Department of Genetics, Development, and Cell Biology, Iowa State University , Ames, Iowa 50011, USA"],"raw_orcid":"https://orcid.org/0000-0002-1671-2286","affiliations":[{"raw_affiliation_string":"Department of Genetics, Development, and Cell Biology, Iowa State University , Ames, Iowa 50011, USA","institution_ids":["https://openalex.org/I173911158"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5032237809"],"corresponding_institution_ids":["https://openalex.org/I165733156"],"apc_list":{"value":4371,"currency":"USD","value_usd":4371},"apc_paid":{"value":4371,"currency":"USD","value_usd":4371},"fwci":2.5181,"has_fulltext":true,"cited_by_count":30,"citation_normalized_percentile":{"value":0.91463278,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":92,"max":99},"biblio":{"volume":"34","issue":"10","first_page":"3685","last_page":"3701"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10269","display_name":"Epigenetics and DNA Methylation","score":0.41260001063346863,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10269","display_name":"Epigenetics and DNA Methylation","score":0.41260001063346863,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11928","display_name":"Genetic Syndromes and Imprinting","score":0.4113999903202057,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10184","display_name":"Plant Molecular Biology Research","score":0.10689999908208847,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/mdr1","display_name":"MDR1","score":0.9160000085830688},{"id":"https://openalex.org/keywords/dna-glycosylase","display_name":"DNA glycosylase","score":0.9789999723434448},{"id":"https://openalex.org/keywords/dna-demethylation","display_name":"DNA demethylation","score":0.9929999709129333},{"id":"https://openalex.org/keywords/genomic-imprinting","display_name":"genomic imprinting","score":0.777999997138977},{"id":"https://openalex.org/keywords/endosperm","display_name":"endosperm","score":0.7710000276565552},{"id":"https://openalex.org/keywords/sirna","display_name":"siRNA","score":0.7459999918937683},{"id":"https://openalex.org/keywords/transposon-silencing","display_name":"transposon silencing","score":0.878000020980835},{"id":"https://openalex.org/keywords/helitrons","display_name":"Helitrons","score":0.8100000023841858},{"id":"https://openalex.org/keywords/pollen","display_name":"pollen","score":0.38199999928474426},{"id":"https://openalex.org/keywords/female-gametophyte","display_name":"embryo sac","score":0.7689999938011169},{"id":"https://openalex.org/keywords/microgametophyte","display_name":"microgametophyte","score":0.9380000233650208},{"id":"https://openalex.org/keywords/seed-development","display_name":"seed development","score":0.4950000047683716},{"id":"https://openalex.org/keywords/maize","display_name":"maize","score":0.3720000088214874}],"concepts":[{"id":"https://openalex.org/C113442657","wikidata":"https://www.wikidata.org/wiki/Q25624","display_name":"Endosperm","level":2,"score":0.9030858278274536},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.8703672885894775},{"id":"https://openalex.org/C16824249","wikidata":"https://www.wikidata.org/wiki/Q5205753","display_name":"DNA demethylation","level":5,"score":0.7548625469207764},{"id":"https://openalex.org/C201492766","wikidata":"https://www.wikidata.org/wiki/Q84087","display_name":"Genomic imprinting","level":5,"score":0.644812822341919},{"id":"https://openalex.org/C4918238","wikidata":"https://www.wikidata.org/wiki/Q121438","display_name":"Transposable element","level":4,"score":0.6445679664611816},{"id":"https://openalex.org/C73766848","wikidata":"https://www.wikidata.org/wiki/Q5262529","display_name":"Derepression","level":5,"score":0.5621961951255798},{"id":"https://openalex.org/C192396546","wikidata":"https://www.wikidata.org/wiki/Q413156","display_name":"DNA glycosylase","level":4,"score":0.555791974067688},{"id":"https://openalex.org/C190727270","wikidata":"https://www.wikidata.org/wiki/Q874745","display_name":"DNA methylation","level":4,"score":0.5541179776191711},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.5365633368492126},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.5297471284866333},{"id":"https://openalex.org/C143065580","wikidata":"https://www.wikidata.org/wiki/Q3285695","display_name":"Mutant","level":3,"score":0.44974732398986816},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.37736544013023376},{"id":"https://openalex.org/C153911025","wikidata":"https://www.wikidata.org/wiki/Q7202","display_name":"Molecular biology","level":1,"score":0.34065675735473633},{"id":"https://openalex.org/C186310378","wikidata":"https://www.wikidata.org/wiki/Q941796","display_name":"Psychological repression","level":4,"score":0.17002713680267334},{"id":"https://openalex.org/C134935766","wikidata":"https://www.wikidata.org/wiki/Q210538","display_name":"DNA repair","level":3,"score":0.15921688079833984}],"mesh":[{"descriptor_ui":"D003313","descriptor_name":"Zea mays","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D003313","descriptor_name":"Zea mays","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D004247","descriptor_name":"DNA","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D017360","descriptor_name":"Arabidopsis","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D018392","descriptor_name":"Genomic Imprinting","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D018506","descriptor_name":"Gene Expression Regulation, Plant","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D019175","descriptor_name":"DNA Methylation","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D034741","descriptor_name":"RNA, Small Interfering","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D045647","descriptor_name":"DNA Glycosylases","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D045647","descriptor_name":"DNA Glycosylases","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D056625","descriptor_name":"Endosperm","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D056625","descriptor_name":"Endosperm","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1093/plcell/koac199","doi":"https://doi.org/10.1093/plcell/koac199","is_oa":true,"landing_page_url":"https://doi.org/10.1093/plcell/koac199","pdf_url":"https://academic.oup.com/plcell/article-pdf/34/10/3685/46168331/koac199.pdf","source":{"id":"https://openalex.org/S48849333","display_name":"The Plant Cell","issn_l":"1040-4651","issn":["1040-4651","1532-298X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["cwts-core","dongbi-a","jufo-3","ki-jl-2","medline","norway-2","poland-200","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"The Plant Cell","raw_type":"journal-article"},{"id":"doi:10.1101/2021.10.04.463062","doi":"https://doi.org/10.1101/2021.10.04.463062","is_oa":true,"landing_page_url":"https://doi.org/10.1101/2021.10.04.463062","pdf_url":"https://www.biorxiv.org/content/biorxiv/early/2022/03/29/2021.10.04.463062.full.pdf","source":{"id":"https://openalex.org/S4306402567","display_name":"bioRxiv (Cold Spring Harbor Laboratory)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I2750212522","host_organization_name":"Cold Spring Harbor Laboratory","host_organization_lineage":["https://openalex.org/I2750212522"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"acceptedVersion","is_accepted":true,"is_published":false,"raw_source_name":"bioRxiv","raw_type":"posted-content"},{"id":"pmh:oai:pubmedcentral.nih.gov:9516051","doi":null,"is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/9516051","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Plant Cell","raw_type":"Text"},{"id":"pmid:35775949","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/35775949","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"The Plant cell","raw_type":"Journal Article"}],"best_oa_location":{"id":"doi:10.1093/plcell/koac199","doi":"https://doi.org/10.1093/plcell/koac199","is_oa":true,"landing_page_url":"https://doi.org/10.1093/plcell/koac199","pdf_url":"https://academic.oup.com/plcell/article-pdf/34/10/3685/46168331/koac199.pdf","source":{"id":"https://openalex.org/S48849333","display_name":"The Plant Cell","issn_l":"1040-4651","issn":["1040-4651","1532-298X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["cwts-core","dongbi-a","jufo-3","ki-jl-2","medline","norway-2","poland-200","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"The Plant Cell","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.4359000027179718,"display_name":"Zero hunger","id":"https://metadata.un.org/sdg/2"}],"study_designs":[],"awards":[{"id":"https://openalex.org/G2609911163","display_name":"TRANSFORM-PGR: Whole genome assembly of the maize NAM founders","funder_award_id":"1744001","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G8079466770","display_name":"DNA demethylation in maize endosperm gene regulation","funder_award_id":"2114797","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"}],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"},{"id":"https://openalex.org/F4320310010","display_name":"University of Georgia","ror":"https://ror.org/00te3t702"},{"id":"https://openalex.org/F4320334074","display_name":"Georgia Advanced Computing Resource Center, University of Georgia","ror":null}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4283769006.pdf","grobid_xml":"https://content.openalex.org/works/W4283769006.grobid-xml"},"referenced_works_count":95,"referenced_works":["https://openalex.org/W209389415","https://openalex.org/W564531506","https://openalex.org/W1531079516","https://openalex.org/W1586021010","https://openalex.org/W1919257374","https://openalex.org/W1979479180","https://openalex.org/W1983671446","https://openalex.org/W1985676173","https://openalex.org/W1996423252","https://openalex.org/W2004955906","https://openalex.org/W2005611856","https://openalex.org/W2011303868","https://openalex.org/W2018249152","https://openalex.org/W2019630339","https://openalex.org/W2020173141","https://openalex.org/W2020746228","https://openalex.org/W2034851274","https://openalex.org/W2036897871","https://openalex.org/W2051465150","https://openalex.org/W2057695331","https://openalex.org/W2063947061","https://openalex.org/W2089812281","https://openalex.org/W2101184565","https://openalex.org/W2101641832","https://openalex.org/W2102619694","https://openalex.org/W2103441770","https://openalex.org/W2104824203","https://openalex.org/W2109051018","https://openalex.org/W2114883397","https://openalex.org/W2121549284","https://openalex.org/W2123931334","https://openalex.org/W2127207387","https://openalex.org/W2130535352","https://openalex.org/W2132121419","https://openalex.org/W2132926880","https://openalex.org/W2134100102","https://openalex.org/W2135640258","https://openalex.org/W2138381647","https://openalex.org/W2140952049","https://openalex.org/W2142136518","https://openalex.org/W2149992227","https://openalex.org/W2151883199","https://openalex.org/W2156825952","https://openalex.org/W2162691890","https://openalex.org/W2163967622","https://openalex.org/W2170551349","https://openalex.org/W2223836536","https://openalex.org/W2285024752","https://openalex.org/W2321492620","https://openalex.org/W2336835708","https://openalex.org/W2342913879","https://openalex.org/W2401562190","https://openalex.org/W2419538277","https://openalex.org/W2503803182","https://openalex.org/W2561680509","https://openalex.org/W2580815116","https://openalex.org/W2623168030","https://openalex.org/W2647936361","https://openalex.org/W2737056215","https://openalex.org/W2748659517","https://openalex.org/W2754256904","https://openalex.org/W2754946693","https://openalex.org/W2756351847","https://openalex.org/W2774024647","https://openalex.org/W2790779827","https://openalex.org/W2806742579","https://openalex.org/W2883756413","https://openalex.org/W2898392666","https://openalex.org/W2898440040","https://openalex.org/W2935979075","https://openalex.org/W2939954111","https://openalex.org/W2950176439","https://openalex.org/W2951690611","https://openalex.org/W2952150941","https://openalex.org/W2964820234","https://openalex.org/W2967595161","https://openalex.org/W2973160552","https://openalex.org/W2993526744","https://openalex.org/W2998675227","https://openalex.org/W3008089063","https://openalex.org/W3014227144","https://openalex.org/W3027512039","https://openalex.org/W3083393593","https://openalex.org/W3104343176","https://openalex.org/W3122287224","https://openalex.org/W3124671267","https://openalex.org/W3137030566","https://openalex.org/W3139265997","https://openalex.org/W3140760506","https://openalex.org/W3159648982","https://openalex.org/W3160971999","https://openalex.org/W3171321388","https://openalex.org/W3180005229","https://openalex.org/W3181129858","https://openalex.org/W3189525949"],"related_works":["https://openalex.org/W4411796914","https://openalex.org/W4220661376","https://openalex.org/W6920982942","https://openalex.org/W6976827726","https://openalex.org/W2135640258","https://openalex.org/W2089812281","https://openalex.org/W4283779318","https://openalex.org/W7220735032","https://openalex.org/W4402922696","https://openalex.org/W2021695374"],"abstract_inverted_index":{"Demethylation":[0],"of":[1,7,26,54,75,77,82,93,109,123],"transposons":[2],"can":[3],"activate":[4],"the":[5,16,36,121],"expression":[6,14,25,85],"nearby":[8],"genes":[9,114,124],"and":[10,68,138,148,166,168],"cause":[11],"imprinted":[12,113],"gene":[13],"in":[15,35,79,86,98,144,163,181],"endosperm;":[17],"this":[18],"demethylation":[19,74,158],"is":[20,70,100,177],"hypothesized":[21],"to":[22,24,64],"lead":[23],"transposon":[27,172],"small":[28],"interfering":[29],"RNAs":[30],"(siRNAs)":[31],"that":[32,125,170],"reinforce":[33],"silencing":[34],"next":[37],"generation":[38],"through":[39],"transfer":[40],"either":[41],"into":[42],"egg":[43],"or":[44],"embryo.":[45],"Here":[46],"we":[47],"describe":[48],"maize":[49,164],"(Zea":[50],"mays)":[51],"maternal":[52],"derepression":[53],"r1":[55],"(mdr1),":[56],"which":[57,69],"encodes":[58],"a":[59],"DNA":[60,96,157],"glycosylase":[61],"with":[62,106,117],"homology":[63],"Arabidopsis":[65],"thaliana":[66],"DEMETER":[67],"partially":[71],"responsible":[72],"for":[73],"thousands":[76],"regions":[78,128],"endosperm.":[80,182],"Instead":[81],"promoting":[83],"siRNA":[84],"endosperm,":[87],"MDR1":[88,118,137],"activity":[89],"inhibits":[90],"it.":[91],"Methylation":[92],"most":[94],"repetitive":[95],"elements":[97],"endosperm":[99,165],"not":[101,130],"significantly":[102],"affected":[103],"by":[104,159],"MDR1,":[105],"an":[107],"exception":[108],"Helitrons.":[110],"While":[111],"maternally-expressed":[112],"preferentially":[115],"overlap":[116,126],"demethylated":[119,127],"regions,":[120],"majority":[122],"are":[129],"imprinted.":[131],"Double":[132],"mutant":[133,150],"megagametophytes":[134],"lacking":[135],"both":[136],"its":[139,178],"close":[140],"homolog":[141],"DNG102":[142],"result":[143],"early":[145],"seed":[146],"failure,":[147],"double":[149],"microgametophytes":[151],"fail":[152],"pre-fertilization.":[153],"These":[154],"data":[155],"establish":[156],"glycosylases":[160],"as":[161],"essential":[162],"pollen":[167],"suggest":[169],"neither":[171],"repression":[173],"nor":[174],"genomic":[175],"imprinting":[176],"main":[179],"function":[180]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":10},{"year":2024,"cited_by_count":7},{"year":2023,"cited_by_count":7},{"year":2022,"cited_by_count":5}],"updated_date":"2026-11-03T10:50:19.383937","created_date":"2022-07-03T00:00:00"}
