{"id":"https://openalex.org/W4283697249","doi":"https://doi.org/10.1099/jgv.0.001749","title":"Differential and defective transcription of koala retrovirus indicates the complexity of host and virus evolution","display_name":"Differential and defective transcription of koala retrovirus indicates the complexity of host and virus evolution","publication_year":2022,"publication_date":"2022-06-28","ids":{"openalex":"https://openalex.org/W4283697249","doi":"https://doi.org/10.1099/jgv.0.001749","pmid":"https://pubmed.ncbi.nlm.nih.gov/35762858"},"language":"en","primary_location":{"id":"doi:10.1099/jgv.0.001749","doi":"https://doi.org/10.1099/jgv.0.001749","is_oa":true,"landing_page_url":"https://doi.org/10.1099/jgv.0.001749","pdf_url":null,"source":{"id":"https://openalex.org/S103035011","display_name":"Journal of General Virology","issn_l":"0022-1317","issn":["0022-1317","1465-2099"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["anvur-scientific","cwts-core","dongbi-b","doyens","jufo-1","ki-jl-1","medline","norway-1","poland-70","russia-white-list-2","vabb-shw"],"host_organization":"https://openalex.org/P4310320497","host_organization_name":"Microbiology Society","host_organization_lineage":["https://openalex.org/P4310320497"],"host_organization_lineage_names":["Microbiology Society"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of General Virology","raw_type":"journal-article"},"volume":null,"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://doi.org/10.1099/jgv.0.001749","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5012842442","display_name":"Rachael Eugenie Tarlinton","orcid":"https://orcid.org/0000-0003-3325-2311","observed_orcids":["https://orcid.org/0000-0003-3325-2311"]},"institutions":[{"id":"https://openalex.org/I142263535","display_name":"University of Nottingham","ror":"https://ror.org/01ee9ar58","country_code":"GB","type":"education","lineage":["https://openalex.org/I142263535"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"R. E. Tarlinton","raw_affiliation_strings":["School of Veterinary Medicine and Science, University of Nottingham, Nottingham, UK"],"raw_orcid":"https://orcid.org/0000-0003-3325-2311","affiliations":[{"raw_affiliation_string":"School of Veterinary Medicine and Science, University of Nottingham, Nottingham, UK","institution_ids":["https://openalex.org/I142263535"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5006200141","display_name":"Alistair R. Legione","orcid":"https://orcid.org/0000-0003-2407-4496","observed_orcids":["https://orcid.org/0000-0003-2407-4496"]},"institutions":[{"id":"https://openalex.org/I165779595","display_name":"The University of Melbourne","ror":"https://ror.org/01ej9dk98","country_code":"AU","type":"education","lineage":["https://openalex.org/I165779595"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"A. R. Legione","raw_affiliation_strings":["Faculty of Veterinary and Agricultural Sciences, University of Melbourne, Melbourne, Australia"],"raw_orcid":"https://orcid.org/0000-0003-2407-4496","affiliations":[{"raw_affiliation_string":"Faculty of Veterinary and Agricultural Sciences, University of Melbourne, Melbourne, Australia","institution_ids":["https://openalex.org/I165779595"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5018199270","display_name":"Nishat Sarker","orcid":"https://orcid.org/0000-0002-6050-7239","observed_orcids":["https://orcid.org/0000-0002-6050-7239"]},"institutions":[{"id":"https://openalex.org/I165143802","display_name":"The University of Queensland","ror":"https://ror.org/00rqy9422","country_code":"AU","type":"education","lineage":["https://openalex.org/I165143802"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"N. Sarker","raw_affiliation_strings":["School of Veterinary Science, The University of Queensland, Brisbane, Australia"],"raw_orcid":"https://orcid.org/0000-0002-6050-7239","affiliations":[{"raw_affiliation_string":"School of Veterinary Science, The University of Queensland, Brisbane, Australia","institution_ids":["https://openalex.org/I165143802"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5042431031","display_name":"J. Fabijan","orcid":"https://orcid.org/0000-0002-3795-4882","observed_orcids":["https://orcid.org/0000-0002-3795-4882"]},"institutions":[{"id":"https://openalex.org/I132121772","display_name":"Durrell Wildlife Conservation Trust","ror":"https://ror.org/04t35nt16","country_code":"JE","type":"nonprofit","lineage":["https://openalex.org/I132121772"]}],"countries":["JE"],"is_corresponding":false,"raw_author_name":"J. Fabijan","raw_affiliation_strings":["Longleat Safari Park, Durrel Wildlife Conservation Trust, UK"],"raw_orcid":"https://orcid.org/0000-0002-3795-4882","affiliations":[{"raw_affiliation_string":"Longleat Safari Park, Durrel Wildlife Conservation Trust, UK","institution_ids":["https://openalex.org/I132121772"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5084085223","display_name":"J. Meers","orcid":"https://orcid.org/0000-0001-9305-0469","observed_orcids":["https://orcid.org/0000-0001-9305-0469"]},"institutions":[{"id":"https://openalex.org/I165143802","display_name":"The University of Queensland","ror":"https://ror.org/00rqy9422","country_code":"AU","type":"education","lineage":["https://openalex.org/I165143802"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"J. Meers","raw_affiliation_strings":["School of Veterinary Science, The University of Queensland, Brisbane, Australia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Veterinary Science, The University of Queensland, Brisbane, Australia","institution_ids":["https://openalex.org/I165143802"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5008404076","display_name":"Lee McMichael","orcid":"https://orcid.org/0000-0002-7675-4859","observed_orcids":["https://orcid.org/0000-0002-7675-4859"]},"institutions":[{"id":"https://openalex.org/I165143802","display_name":"The University of Queensland","ror":"https://ror.org/00rqy9422","country_code":"AU","type":"education","lineage":["https://openalex.org/I165143802"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"L. McMichael","raw_affiliation_strings":["School of Veterinary Science, The University of Queensland, Brisbane, Australia"],"raw_orcid":"https://orcid.org/0000-0002-7675-4859","affiliations":[{"raw_affiliation_string":"School of Veterinary Science, The University of Queensland, Brisbane, Australia","institution_ids":["https://openalex.org/I165143802"]}]},{"author_position":"middle","author":{"id":null,"display_name":"G. Simmons","orcid":"https://orcid.org/0000-0002-6154-738X","observed_orcids":["https://orcid.org/0000-0002-6154-738X"]},"institutions":[{"id":"https://openalex.org/I165143802","display_name":"The University of Queensland","ror":"https://ror.org/00rqy9422","country_code":"AU","type":"education","lineage":["https://openalex.org/I165143802"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"G. Simmons","raw_affiliation_strings":["School of Veterinary Science, The University of Queensland, Brisbane, Australia"],"raw_orcid":"https://orcid.org/0000-0002-6154-738X","affiliations":[{"raw_affiliation_string":"School of Veterinary Science, The University of Queensland, Brisbane, Australia","institution_ids":["https://openalex.org/I165143802"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5103207912","display_name":"Helen C. Owen","orcid":"https://orcid.org/0000-0003-0859-4766","observed_orcids":["https://orcid.org/0000-0003-0859-4766"]},"institutions":[{"id":"https://openalex.org/I165143802","display_name":"The University of Queensland","ror":"https://ror.org/00rqy9422","country_code":"AU","type":"education","lineage":["https://openalex.org/I165143802"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"H. Owen","raw_affiliation_strings":["School of Veterinary Science, The University of Queensland, Brisbane, Australia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Veterinary Science, The University of Queensland, Brisbane, Australia","institution_ids":["https://openalex.org/I165143802"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5050305550","display_name":"Jennifer M. Seddon","orcid":"https://orcid.org/0000-0003-3789-6878","observed_orcids":["https://orcid.org/0000-0003-3789-6878"]},"institutions":[{"id":"https://openalex.org/I165143802","display_name":"The University of Queensland","ror":"https://ror.org/00rqy9422","country_code":"AU","type":"education","lineage":["https://openalex.org/I165143802"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"J. M. Seddon","raw_affiliation_strings":["School of Veterinary Science, The University of Queensland, Brisbane, Australia"],"raw_orcid":"https://orcid.org/0000-0003-3789-6878","affiliations":[{"raw_affiliation_string":"School of Veterinary Science, The University of Queensland, Brisbane, Australia","institution_ids":["https://openalex.org/I165143802"]}]},{"author_position":"middle","author":{"id":null,"display_name":"G. Dick","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I132121772","display_name":"Durrell Wildlife Conservation Trust","ror":"https://ror.org/04t35nt16","country_code":"JE","type":"nonprofit","lineage":["https://openalex.org/I132121772"]}],"countries":["JE"],"is_corresponding":false,"raw_author_name":"G. Dick","raw_affiliation_strings":["Longleat Safari Park, Durrel Wildlife Conservation Trust, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Longleat Safari Park, Durrel Wildlife Conservation Trust, UK","institution_ids":["https://openalex.org/I132121772"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5064954713","display_name":"James Ryder","orcid":null,"observed_orcids":[]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"J. S. Ryder","raw_affiliation_strings":["Garston Veterinary Group, Somerset, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Garston Veterinary Group, Somerset, UK","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5108813140","display_name":"F. Hemmatzedah","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I5681781","display_name":"The University of Adelaide","ror":"https://ror.org/00892tw58","country_code":"AU","type":"education","lineage":["https://openalex.org/I4405259444","https://openalex.org/I5681781"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"F. Hemmatzedah","raw_affiliation_strings":["School of Animal and Veterinary Sciences, University of Adelaide, Adelaide, Australia"],"raw_orcid":"https://orcid.org/0000-0002-4572-8869","affiliations":[{"raw_affiliation_string":"School of Animal and Veterinary Sciences, University of Adelaide, Adelaide, Australia","institution_ids":["https://openalex.org/I5681781"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5078960481","display_name":"Darren John Trott","orcid":"https://orcid.org/0000-0002-8297-5770","observed_orcids":["https://orcid.org/0000-0002-8297-5770"]},"institutions":[{"id":"https://openalex.org/I5681781","display_name":"The University of Adelaide","ror":"https://ror.org/00892tw58","country_code":"AU","type":"education","lineage":["https://openalex.org/I4405259444","https://openalex.org/I5681781"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"D. J. Trott","raw_affiliation_strings":["School of Animal and Veterinary Sciences, University of Adelaide, Adelaide, Australia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Animal and Veterinary Sciences, University of Adelaide, Adelaide, Australia","institution_ids":["https://openalex.org/I5681781"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5037211576","display_name":"Natasha Speight","orcid":"https://orcid.org/0000-0001-5367-0241","observed_orcids":["https://orcid.org/0000-0001-5367-0241"]},"institutions":[{"id":"https://openalex.org/I5681781","display_name":"The University of Adelaide","ror":"https://ror.org/00892tw58","country_code":"AU","type":"education","lineage":["https://openalex.org/I4405259444","https://openalex.org/I5681781"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"N. Speight","raw_affiliation_strings":["School of Animal and Veterinary Sciences, University of Adelaide, Adelaide, Australia"],"raw_orcid":"https://orcid.org/0000-0001-5367-0241","affiliations":[{"raw_affiliation_string":"School of Animal and Veterinary Sciences, University of Adelaide, Adelaide, Australia","institution_ids":["https://openalex.org/I5681781"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5026726105","display_name":"Nadine Holmes","orcid":"https://orcid.org/0000-0001-7470-3786","observed_orcids":["https://orcid.org/0000-0001-7470-3786"]},"institutions":[{"id":"https://openalex.org/I142263535","display_name":"University of Nottingham","ror":"https://ror.org/01ee9ar58","country_code":"GB","type":"education","lineage":["https://openalex.org/I142263535"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"N. Holmes","raw_affiliation_strings":["School of Life Sciences, University of Nottingham, Nottingham, UK"],"raw_orcid":"https://orcid.org/0000-0001-7470-3786","affiliations":[{"raw_affiliation_string":"School of Life Sciences, University of Nottingham, Nottingham, UK","institution_ids":["https://openalex.org/I142263535"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5066945868","display_name":"Matthew Loose","orcid":"https://orcid.org/0000-0002-5264-0929","observed_orcids":["https://orcid.org/0000-0002-5264-0929"]},"institutions":[{"id":"https://openalex.org/I142263535","display_name":"University of Nottingham","ror":"https://ror.org/01ee9ar58","country_code":"GB","type":"education","lineage":["https://openalex.org/I142263535"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"M. Loose","raw_affiliation_strings":["School of Life Sciences, University of Nottingham, Nottingham, UK"],"raw_orcid":"https://orcid.org/0000-0002-5264-0929","affiliations":[{"raw_affiliation_string":"School of Life Sciences, University of Nottingham, Nottingham, UK","institution_ids":["https://openalex.org/I142263535"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5081245556","display_name":"Richard David Emes","orcid":"https://orcid.org/0000-0001-6855-5481","observed_orcids":["https://orcid.org/0000-0001-6855-5481"]},"institutions":[{"id":"https://openalex.org/I142263535","display_name":"University of Nottingham","ror":"https://ror.org/01ee9ar58","country_code":"GB","type":"education","lineage":["https://openalex.org/I142263535"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"R. D. Emes","raw_affiliation_strings":["School of Veterinary Medicine and Science, University of Nottingham, Nottingham, UK"],"raw_orcid":"https://orcid.org/0000-0001-6855-5481","affiliations":[{"raw_affiliation_string":"School of Veterinary Medicine and Science, University of Nottingham, Nottingham, UK","institution_ids":["https://openalex.org/I142263535"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":5,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":2.2447,"has_fulltext":true,"cited_by_count":35,"citation_normalized_percentile":{"value":0.87117536,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":93,"max":99},"biblio":{"volume":"103","issue":"6","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10434","display_name":"Chromosomal and Genetic Variations","score":0.5497999787330627,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10434","display_name":"Chromosomal and Genetic Variations","score":0.5497999787330627,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T13385","display_name":"Infectious Diseases and Mycology","score":0.1468999981880188,"subfield":{"id":"https://openalex.org/subfields/3404","display_name":"Small Animals"},"field":{"id":"https://openalex.org/fields/34","display_name":"Veterinary"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T12159","display_name":"T-cell and Retrovirus Studies","score":0.0771000012755394,"subfield":{"id":"https://openalex.org/subfields/2403","display_name":"Immunology"},"field":{"id":"https://openalex.org/fields/24","display_name":"Immunology and Microbiology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/koala-retrovirus","display_name":"koala retrovirus","score":0.9990000128746033},{"id":"https://openalex.org/keywords/endogenous-retroviruses","display_name":"endogenous retroviruses","score":0.8489999771118164},{"id":"https://openalex.org/keywords/koala","display_name":"Phascolarctos cinereus","score":0.5889999866485596},{"id":"https://openalex.org/keywords/lymphoma","display_name":"lymphoma","score":0.7310000061988831},{"id":"https://openalex.org/keywords/retroviral-integration-sites","display_name":"retroviral integration sites","score":0.796999990940094},{"id":"https://openalex.org/keywords/host-virus-coevolution","display_name":"host-virus coevolution","score":0.8199999928474426},{"id":"https://openalex.org/keywords/disease-resistance","display_name":"disease resistance","score":0.7289999723434448},{"id":"https://openalex.org/keywords/retroviral-gene-expression","display_name":"retroviral gene expression","score":0.3709999918937683}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.9053022861480713},{"id":"https://openalex.org/C121346293","wikidata":"https://www.wikidata.org/wiki/Q1340715","display_name":"Endogenous retrovirus","level":4,"score":0.7128871083259583},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.6625139713287354},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.6120080947875977},{"id":"https://openalex.org/C2908647359","wikidata":"https://www.wikidata.org/wiki/Q2625603","display_name":"Population","level":2,"score":0.49114319682121277},{"id":"https://openalex.org/C98108389","wikidata":"https://www.wikidata.org/wiki/Q412563","display_name":"CRISPR","level":3,"score":0.48975372314453125},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.4557177722454071},{"id":"https://openalex.org/C2778431562","wikidata":"https://www.wikidata.org/wiki/Q189308","display_name":"Retrovirus","level":3,"score":0.44353923201560974},{"id":"https://openalex.org/C159047783","wikidata":"https://www.wikidata.org/wiki/Q7215","display_name":"Virology","level":1,"score":0.42776599526405334},{"id":"https://openalex.org/C2522874641","wikidata":"https://www.wikidata.org/wiki/Q808","display_name":"Virus","level":2,"score":0.41328567266464233},{"id":"https://openalex.org/C78458016","wikidata":"https://www.wikidata.org/wiki/Q840400","display_name":"Evolutionary biology","level":1,"score":0.3741174340248108},{"id":"https://openalex.org/C149923435","wikidata":"https://www.wikidata.org/wiki/Q37732","display_name":"Demography","level":1,"score":0.0},{"id":"https://openalex.org/C144024400","wikidata":"https://www.wikidata.org/wiki/Q21201","display_name":"Sociology","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001315","descriptor_name":"Australia","qualifier_ui":"Q000453","qualifier_name":"epidemiology","is_major_topic":false},{"descriptor_ui":"D012190","descriptor_name":"Retroviridae","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012192","descriptor_name":"Retroviridae Infections","qualifier_ui":"Q000662","qualifier_name":"veterinary","is_major_topic":true},{"descriptor_ui":"D017988","descriptor_name":"Gammaretrovirus","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D048368","descriptor_name":"Phascolarctidae","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":9,"locations":[{"id":"doi:10.1099/jgv.0.001749","doi":"https://doi.org/10.1099/jgv.0.001749","is_oa":true,"landing_page_url":"https://doi.org/10.1099/jgv.0.001749","pdf_url":null,"source":{"id":"https://openalex.org/S103035011","display_name":"Journal of General Virology","issn_l":"0022-1317","issn":["0022-1317","1465-2099"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["anvur-scientific","cwts-core","dongbi-b","doyens","jufo-1","ki-jl-1","medline","norway-1","poland-70","russia-white-list-2","vabb-shw"],"host_organization":"https://openalex.org/P4310320497","host_organization_name":"Microbiology Society","host_organization_lineage":["https://openalex.org/P4310320497"],"host_organization_lineage_names":["Microbiology Society"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of General Virology","raw_type":"journal-article"},{"id":"doi:10.1101/211466","doi":"https://doi.org/10.1101/211466","is_oa":true,"landing_page_url":"https://doi.org/10.1101/211466","pdf_url":"https://www.biorxiv.org/content/biorxiv/early/2021/12/15/211466.full.pdf","source":{"id":"https://openalex.org/S4306402567","display_name":"bioRxiv (Cold Spring Harbor Laboratory)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I2750212522","host_organization_name":"Cold Spring Harbor Laboratory","host_organization_lineage":["https://openalex.org/I2750212522"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"acceptedVersion","is_accepted":true,"is_published":false,"raw_source_name":"bioRxiv","raw_type":"posted-content"},{"id":"pmid:35762858","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/35762858","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"The Journal of general virology","raw_type":"Journal Article"},{"id":"pmh:oai:nottingham-repository.worktribe.com:7606844","doi":null,"is_oa":true,"landing_page_url":"https://doi.org/10.1099/jgv.0.001749","pdf_url":null,"source":{"id":"https://openalex.org/S4306402483","display_name":"Repository@Nottingham (University of Nottingham)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I142263535","host_organization_name":"University of Nottingham","host_organization_lineage":["https://openalex.org/I142263535"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":null,"raw_type":"Journal Article"},{"id":"pmh:oai:researchonline.jcu.edu.au:90123","doi":null,"is_oa":true,"landing_page_url":"https://researchonline.jcu.edu.au/90123/1/90123.pdf","pdf_url":"https://researchonline.jcu.edu.au/90123/1/90123.pdf","source":{"id":"https://openalex.org/S4306400519","display_name":"ResearchOnline at James Cook University (James Cook University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I86467917","host_organization_name":"James Cook University","host_organization_lineage":["https://openalex.org/I86467917"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Article"},{"id":"pmh:oai:https://nottingham-repository.worktribe.com/:1856345","doi":null,"is_oa":true,"landing_page_url":"https://nottingham-repository.worktribe.com/output/1856345","pdf_url":"https://nottingham-repository.worktribe.com/preview/46162697/211466v2.full.pdf","source":{"id":"https://openalex.org/S4306402483","display_name":"Repository@Nottingham (University of Nottingham)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I142263535","host_organization_name":"University of Nottingham","host_organization_lineage":["https://openalex.org/I142263535"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Preprint / Working Paper"},{"id":"pmh:oai:https://nottingham-repository.worktribe.com/:7606844","doi":null,"is_oa":true,"landing_page_url":"https://nottingham-repository.worktribe.com/output/7606844","pdf_url":"https://nottingham-repository.worktribe.com/file/7606844/1/Differential%20and%20defective%20transcription%20of%20koala%20retrovirus%20indicates%20the%20complexity%20of%20host%20and%20virus%20evolution","source":{"id":"https://openalex.org/S4306402483","display_name":"Repository@Nottingham (University of Nottingham)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I142263535","host_organization_name":"University of Nottingham","host_organization_lineage":["https://openalex.org/I142263535"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Journal Article"},{"id":"pmh:oai:irep.ntu.ac.uk:48188","doi":null,"is_oa":true,"landing_page_url":"http://irep.ntu.ac.uk/id/eprint/48188/","pdf_url":null,"source":{"id":"https://openalex.org/S4306400559","display_name":"Nottingham Trent University's Institutional Repository (Nottingham Trent Repository)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I52590639","host_organization_name":"Nottingham Trent University","host_organization_lineage":["https://openalex.org/I52590639"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Article"},{"id":"pmh:oai:nottingham-repository.worktribe.com:1856345","doi":null,"is_oa":true,"landing_page_url":"https://doi.org/10.1101/211466","pdf_url":null,"source":{"id":"https://openalex.org/S4306402483","display_name":"Repository@Nottingham (University of Nottingham)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I142263535","host_organization_name":"University of Nottingham","host_organization_lineage":["https://openalex.org/I142263535"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Preprint / Working Paper"}],"best_oa_location":{"id":"doi:10.1099/jgv.0.001749","doi":"https://doi.org/10.1099/jgv.0.001749","is_oa":true,"landing_page_url":"https://doi.org/10.1099/jgv.0.001749","pdf_url":null,"source":{"id":"https://openalex.org/S103035011","display_name":"Journal of General Virology","issn_l":"0022-1317","issn":["0022-1317","1465-2099"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["anvur-scientific","cwts-core","dongbi-b","doyens","jufo-1","ki-jl-1","medline","norway-1","poland-70","russia-white-list-2","vabb-shw"],"host_organization":"https://openalex.org/P4310320497","host_organization_name":"Microbiology Society","host_organization_lineage":["https://openalex.org/P4310320497"],"host_organization_lineage_names":["Microbiology Society"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of General Virology","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Good health and well-being","id":"https://metadata.un.org/sdg/3","score":0.428600013256073}],"study_designs":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320313811","display_name":"Veski","ror":"https://ror.org/04vq43039"},{"id":"https://openalex.org/F4320320984","display_name":"University of Queensland","ror":"https://ror.org/00rqy9422"},{"id":"https://openalex.org/F4320321995","display_name":"Queensland Government","ror":"https://ror.org/037405308"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4283697249.pdf","grobid_xml":"https://content.openalex.org/works/W4283697249.grobid-xml"},"referenced_works_count":80,"referenced_works":["https://openalex.org/W1513359116","https://openalex.org/W1967953772","https://openalex.org/W1968449202","https://openalex.org/W1969606079","https://openalex.org/W1981662437","https://openalex.org/W1989297410","https://openalex.org/W2000998128","https://openalex.org/W2006552475","https://openalex.org/W2007485145","https://openalex.org/W2020873370","https://openalex.org/W2024907713","https://openalex.org/W2029511310","https://openalex.org/W2031333605","https://openalex.org/W2039386265","https://openalex.org/W2046643465","https://openalex.org/W2049768226","https://openalex.org/W2055097234","https://openalex.org/W2063855257","https://openalex.org/W2066251405","https://openalex.org/W2068878293","https://openalex.org/W2069384396","https://openalex.org/W2082666195","https://openalex.org/W2088065670","https://openalex.org/W2102278945","https://openalex.org/W2108178576","https://openalex.org/W2108234281","https://openalex.org/W2111945115","https://openalex.org/W2114853012","https://openalex.org/W2121429599","https://openalex.org/W2134966580","https://openalex.org/W2137726111","https://openalex.org/W2138014890","https://openalex.org/W2146740497","https://openalex.org/W2149544405","https://openalex.org/W2152252855","https://openalex.org/W2153967947","https://openalex.org/W2157051716","https://openalex.org/W2160734881","https://openalex.org/W2170239652","https://openalex.org/W2276803874","https://openalex.org/W2311422246","https://openalex.org/W2323326409","https://openalex.org/W2323884331","https://openalex.org/W2419952782","https://openalex.org/W2471967956","https://openalex.org/W2515923605","https://openalex.org/W2516601938","https://openalex.org/W2548462477","https://openalex.org/W2552323757","https://openalex.org/W2555724080","https://openalex.org/W2564685971","https://openalex.org/W2588150189","https://openalex.org/W2593824282","https://openalex.org/W2768445522","https://openalex.org/W2771823534","https://openalex.org/W2788228074","https://openalex.org/W2789843538","https://openalex.org/W2809304428","https://openalex.org/W2810416640","https://openalex.org/W2886967317","https://openalex.org/W2922263141","https://openalex.org/W2938595881","https://openalex.org/W2949053168","https://openalex.org/W2953899971","https://openalex.org/W2963905942","https://openalex.org/W2979831476","https://openalex.org/W3000410326","https://openalex.org/W3006495831","https://openalex.org/W3011564037","https://openalex.org/W3016182769","https://openalex.org/W3043813156","https://openalex.org/W3049066810","https://openalex.org/W3090218254","https://openalex.org/W3105357385","https://openalex.org/W3110813835","https://openalex.org/W3125561560","https://openalex.org/W3129249930","https://openalex.org/W3133101820","https://openalex.org/W3196984533","https://openalex.org/W4394187597"],"related_works":["https://openalex.org/W2767763531","https://openalex.org/W2149708129","https://openalex.org/W7065260828","https://openalex.org/W2069384396","https://openalex.org/W2316628929","https://openalex.org/W3105357385","https://openalex.org/W2152252855","https://openalex.org/W3125561560","https://openalex.org/W2768445522","https://openalex.org/W141778263"],"abstract_inverted_index":{"Abstract":[0],"Koala":[1],"retrovirus":[2],"(KoRV)":[3],"is":[4,18],"unique":[5],"amongst":[6],"endogenous":[7,82],"(inherited)":[8],"retroviruses":[9],"in":[10,31,36,72,164],"that":[11,145,147,175,183],"its":[12],"incorporation":[13],"to":[14,24,49,55,132,150,157,190,196,228,236],"the":[15,37,41,73,151,212,222,238],"host":[16],"genome":[17,33],"still":[19],"active,":[20],"providing":[21],"an":[22],"opportunity":[23],"study":[25],"what":[26],"drives":[27],"this":[28],"fundamental":[29],"process":[30],"vertebrate":[32],"evolution.":[34],"Animals":[35],"southern":[38],"part":[39,75],"of":[40,44,60,65,76,90,102,108,123,125,140,215,225],"natural":[42],"range":[43,78],"koalas":[45,116,146],"were":[46],"previously":[47],"thought":[48],"be":[50],"either":[51],"virus":[52],"free":[53,167],"or":[54,204],"have":[56,80,186,200],"only":[57],"exogenous":[58,84],"variants":[59,174,199],"KoRV":[61,66,85,91,141,152,166,191,243],"with":[62,86],"low":[63],"rates":[64,89],"induced":[67,92,244],"disease.":[68,245],"In":[69],"contrast,":[70],"animals":[71],"northern":[74],"their":[77],"universally":[79],"both":[81],"and":[83,112,117,120,129,137,192,230],"very":[87],"high":[88],"disease":[93,234],"such":[94],"as":[95,195],"lymphoma.":[96],"This":[97,181,217],"paper":[98],"uses":[99],"a":[100,208],"combination":[101],"sequencing":[103,107,122],"technologies,":[104],"Illumina":[105],"RNA":[106],"\u201csouthern\u201d":[109,126],"(south":[110],"Australian)":[111],"\u201cnorthern\u201d":[113],"(SE":[114],"QLD)":[115],"CRISPR":[118],"enrichment":[119],"nanopore":[121],"DNA":[124],"(South":[127],"Australian":[128],"Victorian":[130],"animals)":[131],"retrieve":[133],"full":[134],"length":[135],"loci":[136],"intregration":[138],"sites":[139],"variants.":[142],"We":[143],"demonstrate":[144],"tested":[148],"negative":[149],"pol":[153],"gene":[154],"qPCR,":[155],"used":[156],"detect":[158],"replication":[159],"competent":[160],"KoRV,":[161],"are":[162,176],"not":[163,177],"fact":[165],"but":[168],"harbour":[169],"defective,":[170],"presumably":[171],"endogenous,":[172],"\u201cRecKoRV\u201d":[173],"fixed":[178],"between":[179],"animals.":[180],"indicates":[182],"these":[184,198],"populations":[185],"historically":[187],"been":[188],"exposed":[189],"raises":[193],"questions":[194],"whether":[197,205],"arisen":[201],"by":[202],"chance":[203],"they":[206],"provide":[207],"protective":[209],"effect":[210],"from":[211,242],"infectious":[213],"forms":[214],"KoRV.":[216],"latter":[218],"explanation":[219],"would":[220],"offer":[221],"intriguing":[223],"prospect":[224],"being":[226],"able":[227],"monitor":[229],"selectively":[231],"breed":[232],"for":[233],"resistance":[235],"protect":[237],"wild":[239],"koala":[240],"population":[241]},"counts_by_year":[{"year":2026,"cited_by_count":5},{"year":2025,"cited_by_count":6},{"year":2024,"cited_by_count":2},{"year":2023,"cited_by_count":5},{"year":2022,"cited_by_count":4},{"year":2021,"cited_by_count":4},{"year":2020,"cited_by_count":4},{"year":2019,"cited_by_count":2},{"year":2018,"cited_by_count":2}],"updated_date":"2026-11-04T10:54:05.112534","created_date":"2022-06-30T00:00:00"}