{"id":"https://openalex.org/W4249771630","doi":"https://doi.org/10.1134/s1022795418060133","title":"Cold Temperature Regulation of Zoospore Release in Phytophthora sojae: The Genes That Differentially Expressed by Cold Temperature","display_name":"Cold Temperature Regulation of Zoospore Release in Phytophthora sojae: The Genes That Differentially Expressed by Cold Temperature","publication_year":2018,"publication_date":"2018-06-01","ids":{"openalex":"https://openalex.org/W4249771630","doi":"https://doi.org/10.1134/s1022795418060133"},"language":"en","primary_location":{"id":"doi:10.1134/s1022795418060133","doi":"https://doi.org/10.1134/s1022795418060133","is_oa":false,"landing_page_url":"https://doi.org/10.1134/s1022795418060133","pdf_url":null,"source":{"id":"https://openalex.org/S96120751","display_name":"Russian Journal of Genetics","issn_l":"1022-7954","issn":["1022-7954","1608-3369"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["cwts-core","dongbi-d","norway-1","poland-20","russia-white-list-3"],"host_organization":"https://openalex.org/P4310320267","host_organization_name":"Pleiades Publishing","host_organization_lineage":["https://openalex.org/P4310320267","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Pleiades Publishing","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Russian Journal of Genetics","raw_type":"journal-article"},"volume":null,"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5100677057","display_name":"Ya Wang","orcid":"https://orcid.org/0000-0001-7514-8542","observed_orcids":["https://orcid.org/0000-0001-7514-8542"]},"institutions":[{"id":"https://openalex.org/I4210124184","display_name":"Heilongjiang Bayi Agricultural University","ror":"https://ror.org/030jxf285","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210124184"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Ya. Wang","raw_affiliation_strings":["Heilongjiang Bayi Agricultural University, Daqing, Heilongjiang, 163319, P.R. China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Heilongjiang Bayi Agricultural University, Daqing, Heilongjiang, 163319, P.R. China","institution_ids":["https://openalex.org/I4210124184"]}]},{"author_position":"middle","author":{"id":null,"display_name":"X. Jin","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I4210124184","display_name":"Heilongjiang Bayi Agricultural University","ror":"https://ror.org/030jxf285","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210124184"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"X. Jin","raw_affiliation_strings":["Heilongjiang Bayi Agricultural University, Daqing, Heilongjiang, 163319, P.R. China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Heilongjiang Bayi Agricultural University, Daqing, Heilongjiang, 163319, P.R. China","institution_ids":["https://openalex.org/I4210124184"]}]},{"author_position":"middle","author":{"id":null,"display_name":"H. Rui","orcid":null,"observed_orcids":[]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"H. Rui","raw_affiliation_strings":["Heilongjiang Academy of Agricultural Sciences, Daqing, Heilongjiang, 163316, P.R. China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Heilongjiang Academy of Agricultural Sciences, Daqing, Heilongjiang, 163316, P.R. China","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5008514988","display_name":"T. Liu","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I20942203","display_name":"Hainan University","ror":"https://ror.org/03q648j11","country_code":"CN","type":"education","lineage":["https://openalex.org/I20942203"]},{"id":"https://openalex.org/I4210124184","display_name":"Heilongjiang Bayi Agricultural University","ror":"https://ror.org/030jxf285","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210124184"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"T. Liu","raw_affiliation_strings":["Hainan University, Haikou, Hainan Province, 570228, P.R. China","Heilongjiang Bayi Agricultural University, Daqing, Heilongjiang, 163319, P.R. China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Hainan University, Haikou, Hainan Province, 570228, P.R. China","institution_ids":["https://openalex.org/I20942203"]},{"raw_affiliation_string":"Heilongjiang Bayi Agricultural University, Daqing, Heilongjiang, 163319, P.R. China","institution_ids":["https://openalex.org/I4210124184"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5000051619","display_name":"J. M. Hou","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I4210124184","display_name":"Heilongjiang Bayi Agricultural University","ror":"https://ror.org/030jxf285","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210124184"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"J. Hou","raw_affiliation_strings":["Heilongjiang Bayi Agricultural University, Daqing, Heilongjiang, 163319, P.R. China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Heilongjiang Bayi Agricultural University, Daqing, Heilongjiang, 163319, P.R. China","institution_ids":["https://openalex.org/I4210124184"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5008514988"],"corresponding_institution_ids":["https://openalex.org/I20942203","https://openalex.org/I4210124184"],"apc_list":null,"apc_paid":null,"fwci":0.2213,"has_fulltext":false,"cited_by_count":2,"citation_normalized_percentile":{"value":0.63672926,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":94},"biblio":{"volume":"54","issue":"6","first_page":"618","last_page":"628"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11771","display_name":"Plant Pathogens and Resistance","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11771","display_name":"Plant Pathogens and Resistance","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10076","display_name":"Plant-Microbe Interactions and Immunity","score":0.0,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12858","display_name":"Plant Disease Resistance and Genetics","score":0.0,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/phytophthora-sojae","display_name":"Phytophthora sojae","score":1.0},{"id":"https://openalex.org/keywords/zoospore-release","display_name":"zoospore release","score":0.9229999780654907},{"id":"https://openalex.org/keywords/low-temperature","display_name":"low temperature","score":0.7929999828338623},{"id":"https://openalex.org/keywords/sporangium","display_name":"sporangia","score":0.8880000114440918},{"id":"https://openalex.org/keywords/differentially-expressed-genes","display_name":"differentially expressed genes","score":0.9409999847412109},{"id":"https://openalex.org/keywords/gene-expression","display_name":"gene expression","score":0.7009999752044678},{"id":"https://openalex.org/keywords/signal-transduction","display_name":"signal transduction","score":0.8059999942779541},{"id":"https://openalex.org/keywords/amino-sugar-and-nucleotide-sugar-metabolism","display_name":"amino sugar and nucleotide sugar metabolism","score":0.9309999942779541},{"id":"https://openalex.org/keywords/arginine-and-proline-metabolism","display_name":"arginine and proline metabolism","score":0.953000009059906},{"id":"https://openalex.org/keywords/starch-and-sucrose-metabolism","display_name":"starch and sucrose metabolism","score":0.9739999771118164},{"id":"https://openalex.org/keywords/oomycete-pathogen","display_name":"oomycete pathogen","score":0.7170000076293945}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.8618602752685547},{"id":"https://openalex.org/C2779872957","wikidata":"https://www.wikidata.org/wiki/Q7189828","display_name":"Phytophthora sojae","level":3,"score":0.7351894378662109},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.5935625433921814},{"id":"https://openalex.org/C113735248","wikidata":"https://www.wikidata.org/wiki/Q220341","display_name":"Zoospore","level":3,"score":0.515557050704956},{"id":"https://openalex.org/C17093226","wikidata":"https://www.wikidata.org/wiki/Q2734081","display_name":"Carbohydrate metabolism","level":2,"score":0.47367674112319946},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.4345913529396057},{"id":"https://openalex.org/C192989942","wikidata":"https://www.wikidata.org/wiki/Q68685","display_name":"Metabolic pathway","level":3,"score":0.41200700402259827},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.3923732042312622},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.287696897983551},{"id":"https://openalex.org/C174618031","wikidata":"https://www.wikidata.org/wiki/Q177332","display_name":"Spore","level":2,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1134/s1022795418060133","doi":"https://doi.org/10.1134/s1022795418060133","is_oa":false,"landing_page_url":"https://doi.org/10.1134/s1022795418060133","pdf_url":null,"source":{"id":"https://openalex.org/S96120751","display_name":"Russian Journal of Genetics","issn_l":"1022-7954","issn":["1022-7954","1608-3369"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["cwts-core","dongbi-d","norway-1","poland-20","russia-white-list-3"],"host_organization":"https://openalex.org/P4310320267","host_organization_name":"Pleiades Publishing","host_organization_lineage":["https://openalex.org/P4310320267","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Pleiades Publishing","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Russian Journal of Genetics","raw_type":"journal-article"}],"best_oa_location":null,"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/2","display_name":"Zero hunger","score":0.5365999937057495}],"study_designs":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":29,"referenced_works":["https://openalex.org/W1493283928","https://openalex.org/W1507140736","https://openalex.org/W1546401409","https://openalex.org/W1972982896","https://openalex.org/W1990708453","https://openalex.org/W2026791013","https://openalex.org/W2028665984","https://openalex.org/W2033313057","https://openalex.org/W2033467032","https://openalex.org/W2034963583","https://openalex.org/W2052346632","https://openalex.org/W2060584742","https://openalex.org/W2072122732","https://openalex.org/W2079149250","https://openalex.org/W2100921992","https://openalex.org/W2101618611","https://openalex.org/W2105456389","https://openalex.org/W2110052025","https://openalex.org/W2110393579","https://openalex.org/W2123715175","https://openalex.org/W2140729960","https://openalex.org/W2143758994","https://openalex.org/W2155130938","https://openalex.org/W2166798520","https://openalex.org/W2168002090","https://openalex.org/W2168023061","https://openalex.org/W2191935349","https://openalex.org/W2224345684","https://openalex.org/W2525096511"],"related_works":["https://openalex.org/W2100921992","https://openalex.org/W2048800106","https://openalex.org/W7099735033","https://openalex.org/W2164186566","https://openalex.org/W1996694314","https://openalex.org/W2896479194","https://openalex.org/W1520720496","https://openalex.org/W2053837220","https://openalex.org/W4406468743","https://openalex.org/W2033313057"],"abstract_inverted_index":{"Cold":[0],"temperature":[1,21,59,107],"is":[2,195],"an":[3],"important":[4],"environmental":[5],"factor":[6],"that":[7,131,155],"affects":[8],"the":[9,26,45,80,85,105,111,120,128,156,182,187,198,208],"lives":[10],"of":[11,28,48,79,122,181,189,210],"many":[12],"organisms":[13],"in":[14,104,137,162,186,197],"various":[15],"ways.":[16],"In":[17],"this":[18,37],"study,":[19],"cold":[20,58,88,106,215],"was":[22,41],"found":[23],"to":[24,43,110],"promote":[25],"release":[27,188,212],"zoospores":[29,190],"from":[30,191],"Phytophthora":[31],"sojae":[32,50,193],"sporangia.":[33],"To":[34],"better":[35],"understand":[36],"phenomenon,":[38],"Illumina":[39],"sequencing":[40,76],"used":[42],"examine":[44],"differential":[46],"expression":[47,82],"P.":[49,192],"genes":[51,95,103],"between":[52,84],"three":[53,57],"control":[54,86,112],"libraries":[55,65],"and":[56,72,87,100,127,143,146,149,167,172,175,177],"(4\u00b0C)":[60],"treatment":[61,89],"libraries.":[62],"The":[63,114],"six":[64],"generated":[66],"1.04,":[67],"1.17,":[68],"1.11,":[69],"0.96,":[70],"1.23,":[71],"1.13":[73],"million":[74],"clean":[75],"reads.":[77],"Comparison":[78],"gene":[81],"levels":[83],"conditions":[90],"revealed":[91],"175":[92],"differentially":[93],"expressed":[94],"(DEGs),":[96],"including":[97],"38":[98],"up-regulated":[99],"137":[101],"down-regulated":[102],"group":[108],"compared":[109],"group.":[113],"DEGs":[115,133,163,183],"were":[116,134],"functionally":[117],"classified":[118],"using":[119],"Clusters":[121],"Orthologous":[123],"Groups":[124],"(COG)":[125],"database,":[126],"results":[129],"indicated":[130],"these":[132],"mainly":[135],"involved":[136,185],"signal":[138],"transduction,":[139],"translation,":[140],"ribosomal":[141],"structure":[142],"biogenesis,":[144],"transcription":[145],"carbohydrate":[147],"transport":[148],"metabolism.":[150,179],"KEGG":[151],"pathway":[152],"analysis":[153],"showed":[154],"top":[157],"20":[158],"pathways":[159],"significantly":[160],"enriched":[161],"included":[164],"amino":[165],"sugar":[166,169],"nucleotide":[168],"metabolism,":[170,174],"arginine":[171],"proline":[173],"starch":[176],"sucrose":[178],"Some":[180],"are":[184],"sporangia":[194],"discussed":[196],"present":[199],"work.":[200],"This":[201],"information":[202],"will":[203],"be":[204],"helpful":[205],"for":[206],"understanding":[207],"mechanism":[209],"zoospore":[211],"induced":[213],"by":[214],"temperature.":[216]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2019,"cited_by_count":1}],"updated_date":"2026-09-27T08:07:27.782135","created_date":"2022-05-12T00:00:00"}