{"id":"https://openalex.org/W4241555545","doi":"https://doi.org/10.1002/9783527609482.ch3","title":"HUPO Plasma Proteome Project specimen collection and handling: Towards the standardization of parameters for plasma proteome samples","display_name":"HUPO Plasma Proteome Project specimen collection and handling: Towards the standardization of parameters for plasma proteome samples","publication_year":2006,"publication_date":"2006-10-06","ids":{"openalex":"https://openalex.org/W4241555545","doi":"https://doi.org/10.1002/9783527609482.ch3"},"language":"en","primary_location":{"id":"doi:10.1002/9783527609482.ch3","doi":"https://doi.org/10.1002/9783527609482.ch3","is_oa":false,"landing_page_url":"https://doi.org/10.1002/9783527609482.ch3","pdf_url":null,"source":{"id":"https://openalex.org/S4306464293","display_name":"Wiley eBooks","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/P4310320595","host_organization_name":"Wiley","host_organization_lineage":["https://openalex.org/P4310320595"],"host_organization_lineage_names":["Wiley"],"type":"ebook platform"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Exploring the Human Plasma Proteome","raw_type":"other"},"volume":{"id":"https://openalex.org/W2495392018","display_name":"Exploring the Human Plasma Proteome"},"type":"book-chapter","is_traditional":true,"indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":null,"display_name":"Alex J. Rai","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I145311948","display_name":"Johns Hopkins University","ror":"https://ror.org/00za53h95","country_code":"US","type":"education","lineage":["https://openalex.org/I145311948"]},{"id":"https://openalex.org/I2799853436","display_name":"Johns Hopkins Medicine","ror":"https://ror.org/037zgn354","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I2799853436"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Alex J. Rai","raw_affiliation_strings":["The Johns Hopkins University School of Medicine, Department of Pathology, Division of Clinical Chemistry, 600 N. Wolfe St., Meyer B-121, Baltimore, MD 21287-7065, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"The Johns Hopkins University School of Medicine, Department of Pathology, Division of Clinical Chemistry, 600 N. Wolfe St., Meyer B-121, Baltimore, MD 21287-7065, USA","institution_ids":["https://openalex.org/I145311948","https://openalex.org/I2799853436"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5007436679","display_name":"Craig A. Gelfand","orcid":"https://orcid.org/0009-0007-7349-7395","observed_orcids":["https://orcid.org/0009-0007-7349-7395"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Craig A. Gelfand","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5064238892","display_name":"Bruce C. Haywood","orcid":null,"observed_orcids":[]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Bruce C. Haywood","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5066409619","display_name":"David Warunek","orcid":null,"observed_orcids":[]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"David J. Warunek","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5052437531","display_name":"Jizu Yi","orcid":"https://orcid.org/0000-0002-8976-5207","observed_orcids":["https://orcid.org/0000-0002-8976-5207"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Jizu Yi","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5042704512","display_name":"Mark D. Schuchard","orcid":null,"observed_orcids":[]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Mark D. Schuchard","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5073006468","display_name":"Richard J. Mehigh","orcid":null,"observed_orcids":[]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Richard J. Mehigh","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5013175358","display_name":"Steven L. Cockrill","orcid":null,"observed_orcids":[]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Steven L. Cockrill","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5015214393","display_name":"Graham Scott","orcid":"https://orcid.org/0000-0003-3467-5957","observed_orcids":["https://orcid.org/0000-0003-3467-5957"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Graham B. I. Scott","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5035212482","display_name":"Harald Tammen","orcid":null,"observed_orcids":[]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Harald Tammen","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5005474475","display_name":"Peter Schulz\u2010Knappe","orcid":null,"observed_orcids":[]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Peter Schulz\u2010Knappe","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5039555481","display_name":"David W. Speicher","orcid":"https://orcid.org/0000-0003-1311-4261","observed_orcids":["https://orcid.org/0000-0003-1311-4261"]},"institutions":[{"id":"https://openalex.org/I102322052","display_name":"The Wistar Institute","ror":"https://ror.org/04wncat98","country_code":"US","type":"facility","lineage":["https://openalex.org/I102322052"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"David W. Speicher","raw_affiliation_strings":["The Wistar Institute, 3601 Spruce St., Rm. 151, Philadelphia, PA 19104, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"The Wistar Institute, 3601 Spruce St., Rm. 151, Philadelphia, PA 19104, USA","institution_ids":["https://openalex.org/I102322052"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5084516050","display_name":"Frank Vitzthum","orcid":null,"observed_orcids":[]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Frank Vitzthum","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5046744833","display_name":"Brian B. Haab","orcid":"https://orcid.org/0000-0002-3471-1535","observed_orcids":["https://orcid.org/0000-0002-3471-1535"]},"institutions":[{"id":"https://openalex.org/I1317189400","display_name":"Van Andel Institute","ror":"https://ror.org/00wm07d60","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I1317189400"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Brian B. Haab","raw_affiliation_strings":["The Van Andel Research Institute, 333 Bostwick NE, Grand Rapids, MI 49503, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"The Van Andel Research Institute, 333 Bostwick NE, Grand Rapids, MI 49503, USA","institution_ids":["https://openalex.org/I1317189400"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5075309289","display_name":"G\u00e9rard Siest","orcid":"https://orcid.org/0000-0002-3001-760X","observed_orcids":["https://orcid.org/0000-0002-3001-760X"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Gerard Siest","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"last","author":{"id":"https://openalex.org/A5103203422","display_name":"Daniel W. Chan","orcid":"https://orcid.org/0000-0002-6398-6597","observed_orcids":["https://orcid.org/0000-0002-6398-6597"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Daniel W. Chan","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":7.9305,"has_fulltext":false,"cited_by_count":28,"citation_normalized_percentile":{"value":0.97837658,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":88,"max":97},"biblio":{"volume":null,"issue":null,"first_page":"63","last_page":"89"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10519","display_name":"Advanced Proteomics Techniques and Applications","score":0.9735999703407288,"subfield":{"id":"https://openalex.org/subfields/1607","display_name":"Spectroscopy"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10519","display_name":"Advanced Proteomics Techniques and Applications","score":0.9735999703407288,"subfield":{"id":"https://openalex.org/subfields/1607","display_name":"Spectroscopy"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12867","display_name":"Advanced Biosensing Techniques and Applications","score":0.012199999764561653,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11314","display_name":"Clinical Laboratory Practices and Quality Control","score":0.008200000040233135,"subfield":{"id":"https://openalex.org/subfields/3607","display_name":"Medical Laboratory Technology"},"field":{"id":"https://openalex.org/fields/36","display_name":"Health Professions"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/plasma-proteome","display_name":"plasma proteome","score":0.9290000200271606},{"id":"https://openalex.org/keywords/specimen-collection","display_name":"sample collection","score":0.5550000071525574},{"id":"https://openalex.org/keywords/sample-handling","display_name":"sample handling","score":0.75},{"id":"https://openalex.org/keywords/sample-stability","display_name":"sample stability","score":0.6499999761581421},{"id":"https://openalex.org/keywords/protease-inhibitors","display_name":"protease inhibitors","score":0.9369999766349792},{"id":"https://openalex.org/keywords/preanalytical-variables","display_name":"pre-analytical variables","score":0.7609999775886536},{"id":"https://openalex.org/keywords/reference-materials","display_name":"reference materials","score":0.6549999713897705},{"id":"https://openalex.org/keywords/antibody-microarrays","display_name":"antibody microarrays","score":0.6710000038146973},{"id":"https://openalex.org/keywords/rolling-circle-amplification","display_name":"rolling circle amplification","score":0.8169999718666077},{"id":"https://openalex.org/keywords/seldi-tof-mass-spectrometry","display_name":"SELDI-TOF mass spectrometry","score":0.8199999928474426},{"id":"https://openalex.org/keywords/two-dimensional-electrophoresis","display_name":"two-dimensional gel electrophoresis","score":0.9409999847412109},{"id":"https://openalex.org/keywords/serum-versus-plasma","display_name":"serum versus plasma","score":0.46399998664855957},{"id":"https://openalex.org/keywords/storage-conditions","display_name":"storage conditions","score":0.5619999766349792}],"concepts":[{"id":"https://openalex.org/C2776714187","wikidata":"https://www.wikidata.org/wiki/Q212410","display_name":"Protease","level":3,"score":0.7226604223251343},{"id":"https://openalex.org/C104397665","wikidata":"https://www.wikidata.org/wiki/Q860947","display_name":"Proteome","level":2,"score":0.6492459774017334},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.4391593337059021},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.43382030725479126},{"id":"https://openalex.org/C2781143361","wikidata":"https://www.wikidata.org/wiki/Q55761529","display_name":"Protease inhibitor (pharmacology)","level":5,"score":0.41473355889320374},{"id":"https://openalex.org/C43617362","wikidata":"https://www.wikidata.org/wiki/Q170050","display_name":"Chromatography","level":1,"score":0.3787941038608551},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.2804223895072937},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.22847524285316467},{"id":"https://openalex.org/C203014093","wikidata":"https://www.wikidata.org/wiki/Q101929","display_name":"Immunology","level":1,"score":0.1333664059638977},{"id":"https://openalex.org/C181199279","wikidata":"https://www.wikidata.org/wiki/Q8047","display_name":"Enzyme","level":2,"score":0.13005530834197998},{"id":"https://openalex.org/C2993143319","wikidata":"https://www.wikidata.org/wiki/Q583050","display_name":"Antiretroviral therapy","level":4,"score":0.0},{"id":"https://openalex.org/C3013748606","wikidata":"https://www.wikidata.org/wiki/Q15787","display_name":"Human immunodeficiency virus (HIV)","level":2,"score":0.0},{"id":"https://openalex.org/C142462285","wikidata":"https://www.wikidata.org/wiki/Q2528140","display_name":"Viral load","level":3,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1002/9783527609482.ch3","doi":"https://doi.org/10.1002/9783527609482.ch3","is_oa":false,"landing_page_url":"https://doi.org/10.1002/9783527609482.ch3","pdf_url":null,"source":{"id":"https://openalex.org/S4306464293","display_name":"Wiley eBooks","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/P4310320595","host_organization_name":"Wiley","host_organization_lineage":["https://openalex.org/P4310320595"],"host_organization_lineage_names":["Wiley"],"type":"ebook platform"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Exploring the Human Plasma Proteome","raw_type":"other"}],"best_oa_location":null,"sustainable_development_goals":[],"study_designs":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":0,"referenced_works":[],"related_works":["https://openalex.org/W2032183031","https://openalex.org/W2019409612","https://openalex.org/W2418130694","https://openalex.org/W2495392018","https://openalex.org/W2038241145","https://openalex.org/W2004473457","https://openalex.org/W7100605529","https://openalex.org/W7095979434","https://openalex.org/W1977184198","https://openalex.org/W7100258648"],"abstract_inverted_index":{"This":[0],"chapter":[1],"contains":[2],"sections":[3],"titled:":[4],"Introduction":[5],"Materials":[6],"and":[7,19,45,74,108],"methods":[8],"HUPO":[9],"reference":[10],"sample":[11],"collection":[12],"protocol":[13],"Differential":[14],"peptide":[15],"display":[16],"Stability":[17],"studies":[18,26,30,36,42,51],"SELDI":[20],"analysis":[21,23,32,54],"SDS-PAGE":[22],"for":[24,28,33,38,48],"stability":[25,29],"2-DE":[27,37,99],"SELDI-TOF":[31,86],"protease":[34,40,49,82,93],"inhibitor":[35],"plasma":[39,70,96],"inhibition":[41,50],"Tryptic":[43],"digestion":[44],"protein":[46],"identification":[47],"Antibody":[52],"microarray":[53],"using":[55],"two-color":[56],"rolling":[57],"circle":[58],"amplification":[59],"Results":[60],"Comparisons":[61],"of":[62,66,69,72,78,81,88,92],"specimen":[63],"types":[64],"Analysis":[65,68,84,97,100],"serum":[67],"Evaluation":[71],"storage":[73],"handling":[75],"conditions":[76],"Evaluations":[77],"the":[79],"use":[80],"inhibitors":[83,94],"with":[85,101],"MS":[87],"\u201ctime":[89],"zero\u201d":[90],"effects":[91],"in":[95],"by":[98],"antibody":[102],"arrays":[103],"Discussion":[104],"Other":[105],"pre-analytical":[106],"variables":[107],"control":[109],"considerations":[110],"Reference":[111],"materials":[112],"Concluding":[113],"remarks":[114],"References":[115]},"counts_by_year":[{"year":2024,"cited_by_count":1},{"year":2022,"cited_by_count":4},{"year":2021,"cited_by_count":5},{"year":2020,"cited_by_count":1},{"year":2019,"cited_by_count":2},{"year":2017,"cited_by_count":3},{"year":2014,"cited_by_count":1},{"year":2012,"cited_by_count":3}],"updated_date":"2026-11-07T11:25:07.637180","created_date":"2022-05-12T00:00:00"}