{"id":"https://openalex.org/W4232902774","doi":"https://doi.org/10.1128/aem.00658-06","title":"Molecular Epidemiologic Investigation of Campylobacter coli in Swine Production Systems, Using Multilocus Sequence Typing","display_name":"Molecular Epidemiologic Investigation of Campylobacter coli in Swine Production Systems, Using Multilocus Sequence Typing","publication_year":2006,"publication_date":"2006-08-01","ids":{"openalex":"https://openalex.org/W4232902774","doi":"https://doi.org/10.1128/aem.00658-06"},"language":"en","primary_location":{"id":"doi:10.1128/aem.00658-06","doi":"https://doi.org/10.1128/aem.00658-06","is_oa":false,"landing_page_url":"https://doi.org/10.1128/aem.00658-06","pdf_url":null,"source":{"id":"https://openalex.org/S158228368","display_name":"Applied and Environmental Microbiology","issn_l":"0099-2240","issn":["0099-2240","1070-6291","1098-5336"],"is_oa":false,"is_in_doaj":true,"is_core":true,"listed_in":["anvur-scientific","cwts-core","doaj","dongbi-b","doyens","jufo-1","ki-jl-1","medline","norway-2","poland-100","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310320263","host_organization_name":"American Society for Microbiology","host_organization_lineage":["https://openalex.org/P4310320263"],"host_organization_lineage_names":["American Society for Microbiology"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Applied and Environmental Microbiology","raw_type":"journal-article"},"volume":null,"type":"article","is_traditional":true,"indexed_in":["crossref","doaj"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5016954726","display_name":"Siddhartha Thakur","orcid":"https://orcid.org/0000-0003-3787-9939","observed_orcids":["https://orcid.org/0000-0003-3787-9939"]},"institutions":[{"id":"https://openalex.org/I137902535","display_name":"North Carolina State University","ror":"https://ror.org/04tj63d06","country_code":"US","type":"education","lineage":["https://openalex.org/I137902535"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Siddhartha Thakur","raw_affiliation_strings":["Department of Population Health and Pathobiology, College of Veterinary Medicine, North Carolina State University, 4700 Hillsborough St., Raleigh, North Carolina 27606"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Population Health and Pathobiology, College of Veterinary Medicine, North Carolina State University, 4700 Hillsborough St., Raleigh, North Carolina 27606","institution_ids":["https://openalex.org/I137902535"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5111599390","display_name":"William E. Morgan Morrow","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I137902535","display_name":"North Carolina State University","ror":"https://ror.org/04tj63d06","country_code":"US","type":"education","lineage":["https://openalex.org/I137902535"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"W. E. Morgan Morrow","raw_affiliation_strings":["Department of Animal Science, North Carolina State University, Raleigh, North Carolina 27606"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Animal Science, North Carolina State University, Raleigh, North Carolina 27606","institution_ids":["https://openalex.org/I137902535"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5111379775","display_name":"Julie A. Funk","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I52357470","display_name":"The Ohio State University","ror":"https://ror.org/00rs6vg23","country_code":"US","type":"education","lineage":["https://openalex.org/I52357470"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Julie A. Funk","raw_affiliation_strings":["Department of Veterinary Preventive Medicine, The Ohio State University, Columbus, Ohio"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Veterinary Preventive Medicine, The Ohio State University, Columbus, Ohio","institution_ids":["https://openalex.org/I52357470"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5089232634","display_name":"Peter B. Bahnson","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I135310074","display_name":"University of Wisconsin\u2013Madison","ror":"https://ror.org/01y2jtd41","country_code":"US","type":"education","lineage":["https://openalex.org/I135310074"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Peter B. Bahnson","raw_affiliation_strings":["Department of Medical Sciences, University of Wisconsin, Madison, Wisconsin"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Medical Sciences, University of Wisconsin, Madison, Wisconsin","institution_ids":["https://openalex.org/I135310074"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5040781012","display_name":"Wondwossen Abebe Gebreyes","orcid":"https://orcid.org/0000-0003-1885-3952","observed_orcids":["https://orcid.org/0000-0003-1885-3952"]},"institutions":[{"id":"https://openalex.org/I137902535","display_name":"North Carolina State University","ror":"https://ror.org/04tj63d06","country_code":"US","type":"education","lineage":["https://openalex.org/I137902535"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Wondwossen A. Gebreyes","raw_affiliation_strings":["Department of Population Health and Pathobiology, College of Veterinary Medicine, North Carolina State University, 4700 Hillsborough St., Raleigh, North Carolina 27606"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Population Health and Pathobiology, College of Veterinary Medicine, North Carolina State University, 4700 Hillsborough St., Raleigh, North Carolina 27606","institution_ids":["https://openalex.org/I137902535"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5040781012"],"corresponding_institution_ids":["https://openalex.org/I137902535"],"apc_list":null,"apc_paid":null,"fwci":2.8479,"has_fulltext":false,"cited_by_count":40,"citation_normalized_percentile":{"value":0.89130599,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":88,"max":97},"biblio":{"volume":"72","issue":"8","first_page":"5666","last_page":"5669"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10486","display_name":"Salmonella and Campylobacter epidemiology","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1106","display_name":"Food Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10486","display_name":"Salmonella and Campylobacter epidemiology","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1106","display_name":"Food Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T13791","display_name":"Veterinary medicine and infectious diseases","score":0.0,"subfield":{"id":"https://openalex.org/subfields/3404","display_name":"Small Animals"},"field":{"id":"https://openalex.org/fields/34","display_name":"Veterinary"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T11688","display_name":"Microbial infections and disease research","score":0.0,"subfield":{"id":"https://openalex.org/subfields/2404","display_name":"Microbiology"},"field":{"id":"https://openalex.org/fields/24","display_name":"Immunology and Microbiology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/campylobacter-coli","display_name":"Campylobacter coli","score":1.0},{"id":"https://openalex.org/keywords/swine-production-systems","display_name":"swine production systems","score":0.7839999794960022},{"id":"https://openalex.org/keywords/multilocus-sequence-typing","display_name":"multilocus sequence typing","score":0.8870000243186951},{"id":"https://openalex.org/keywords/clonal-complexes","display_name":"clonal complexes","score":0.9070000052452087},{"id":"https://openalex.org/keywords/ciprofloxacin-resistance","display_name":"ciprofloxacin resistance","score":0.9869999885559082},{"id":"https://openalex.org/keywords/genotypic-diversity","display_name":"genotypic diversity","score":0.9419999718666077},{"id":"https://openalex.org/keywords/molecular-epidemiology","display_name":"molecular epidemiology","score":0.7059999704360962}],"concepts":[{"id":"https://openalex.org/C77434933","wikidata":"https://www.wikidata.org/wiki/Q4043440","display_name":"Multilocus sequence typing","level":4,"score":0.9450699090957642},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.8311166763305664},{"id":"https://openalex.org/C2779910956","wikidata":"https://www.wikidata.org/wiki/Q131488","display_name":"Campylobacter","level":3,"score":0.8297634124755859},{"id":"https://openalex.org/C2777403496","wikidata":"https://www.wikidata.org/wiki/Q1031711","display_name":"Campylobacter coli","level":4,"score":0.7706340551376343},{"id":"https://openalex.org/C2781209916","wikidata":"https://www.wikidata.org/wiki/Q3215756","display_name":"Typing","level":2,"score":0.6468596458435059},{"id":"https://openalex.org/C135763542","wikidata":"https://www.wikidata.org/wiki/Q106016","display_name":"Genotype","level":3,"score":0.5817254781723022},{"id":"https://openalex.org/C89423630","wikidata":"https://www.wikidata.org/wiki/Q7193","display_name":"Microbiology","level":1,"score":0.530659556388855},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.49762704968452454},{"id":"https://openalex.org/C2778112365","wikidata":"https://www.wikidata.org/wiki/Q3511065","display_name":"Sequence (biology)","level":2,"score":0.46155592799186707},{"id":"https://openalex.org/C2778512257","wikidata":"https://www.wikidata.org/wiki/Q256602","display_name":"Ciprofloxacin","level":3,"score":0.4550931453704834},{"id":"https://openalex.org/C547475151","wikidata":"https://www.wikidata.org/wiki/Q25419","display_name":"Escherichia coli","level":3,"score":0.45249930024147034},{"id":"https://openalex.org/C97669555","wikidata":"https://www.wikidata.org/wiki/Q4118435","display_name":"Molecular epidemiology","level":4,"score":0.43638068437576294},{"id":"https://openalex.org/C523546767","wikidata":"https://www.wikidata.org/wiki/Q10876","display_name":"Bacteria","level":2,"score":0.1558043658733368},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.1467595100402832}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1128/aem.00658-06","doi":"https://doi.org/10.1128/aem.00658-06","is_oa":false,"landing_page_url":"https://doi.org/10.1128/aem.00658-06","pdf_url":null,"source":{"id":"https://openalex.org/S158228368","display_name":"Applied and Environmental Microbiology","issn_l":"0099-2240","issn":["0099-2240","1070-6291","1098-5336"],"is_oa":false,"is_in_doaj":true,"is_core":true,"listed_in":["anvur-scientific","cwts-core","doaj","dongbi-b","doyens","jufo-1","ki-jl-1","medline","norway-2","poland-100","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310320263","host_organization_name":"American Society for Microbiology","host_organization_lineage":["https://openalex.org/P4310320263"],"host_organization_lineage_names":["American Society for Microbiology"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Applied and Environmental Microbiology","raw_type":"journal-article"}],"best_oa_location":null,"sustainable_development_goals":[{"score":0.6735000014305115,"id":"https://metadata.un.org/sdg/2","display_name":"Zero hunger"},{"score":0.5683000087738037,"id":"https://metadata.un.org/sdg/3","display_name":"Good health and well-being"}],"study_designs":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":21,"referenced_works":["https://openalex.org/W1546619211","https://openalex.org/W1581962345","https://openalex.org/W1964368171","https://openalex.org/W1984702361","https://openalex.org/W1997647899","https://openalex.org/W2009615063","https://openalex.org/W2059466089","https://openalex.org/W2066485878","https://openalex.org/W2098177564","https://openalex.org/W2109607229","https://openalex.org/W2110874528","https://openalex.org/W2117455947","https://openalex.org/W2125302790","https://openalex.org/W2143500294","https://openalex.org/W2146396346","https://openalex.org/W2148419513","https://openalex.org/W2149652290","https://openalex.org/W2154975875","https://openalex.org/W2163476348","https://openalex.org/W2166422451","https://openalex.org/W2169541508"],"related_works":["https://openalex.org/W1964114975","https://openalex.org/W7097864635","https://openalex.org/W2156896486","https://openalex.org/W265689701","https://openalex.org/W645823276","https://openalex.org/W226481285","https://openalex.org/W36923859","https://openalex.org/W2148419513","https://openalex.org/W2145658868","https://openalex.org/W7017827343"],"abstract_inverted_index":{"ABSTRACT":[0],"Multilocus":[1],"sequence":[2],"typing":[3],"of":[4,51],"151":[5],"Campylobacter":[6],"coli":[7,45],"isolates":[8,52],"from":[9,53],"swine":[10],"reared":[11],"in":[12],"conventional":[13],"(":[14,20],"n":[15,21],"=":[16,22],"74)":[17],"and":[18,36],"antimicrobial-free":[19],"77)":[23],"production":[24,55],"systems":[25],"revealed":[26],"high":[27],"genotypic":[28],"diversity.":[29],"Sequence":[30],"type":[31],"(ST)":[32],"1413":[33],"was":[34],"predominant":[35],"observed":[37],"among":[38],"ciprofloxacin-resistant":[39],"strains.":[40],"We":[41],"identified":[42],"a":[43],"C.":[44],"ST":[46],"828":[47],"clonal":[48],"complex":[49],"consisting":[50],"both":[54],"systems.":[56]},"counts_by_year":[{"year":2024,"cited_by_count":2},{"year":2023,"cited_by_count":3},{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":3},{"year":2020,"cited_by_count":1},{"year":2019,"cited_by_count":2},{"year":2018,"cited_by_count":3},{"year":2017,"cited_by_count":3},{"year":2016,"cited_by_count":1},{"year":2014,"cited_by_count":3},{"year":2013,"cited_by_count":1},{"year":2012,"cited_by_count":4}],"updated_date":"2026-11-07T11:25:07.637180","created_date":"2022-05-12T00:00:00"}