{"id":"https://openalex.org/W4205348696","doi":"https://doi.org/10.17918/etd-3214","title":"Improving an automated mosaicing algorithm for wide-field microscopy","display_name":"Improving an automated mosaicing algorithm for wide-field microscopy","publication_year":2010,"publication_date":"2010-03-01","ids":{"openalex":"https://openalex.org/W4205348696","doi":"https://doi.org/10.17918/etd-3214"},"language":"en","primary_location":{"id":"doi:10.17918/etd-3214","doi":"https://doi.org/10.17918/etd-3214","is_oa":true,"landing_page_url":"https://doi.org/10.17918/etd-3214","pdf_url":null,"source":null,"license":"public-domain","license_id":"https://openalex.org/licenses/public-domain","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Drexel University","raw_type":"dissertation"},"volume":null,"type":"dissertation","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://doi.org/10.17918/etd-3214","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5068535306","display_name":"Sankhesh Jhaveri","orcid":"https://orcid.org/0000-0002-7072-9556","observed_orcids":["https://orcid.org/0000-0002-7072-9556"]},"institutions":[{"id":"https://openalex.org/I205746353","display_name":"University of Dhaka","ror":"https://ror.org/05wv2vq37","country_code":"BD","type":"education","lineage":["https://openalex.org/I205746353"]}],"countries":["BD"],"is_corresponding":true,"raw_author_name":"Sankhesh Jayesh Jhaveri","raw_affiliation_strings":["DU"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"DU","institution_ids":["https://openalex.org/I205746353"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5017937869","display_name":"Todd C. Doehring","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I72816309","display_name":"Drexel University","ror":"https://ror.org/04bdffz58","country_code":"US","type":"education","lineage":["https://openalex.org/I72816309"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Todd C. Doehring","raw_affiliation_strings":["Drexel University (1970-)"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Drexel University (1970-)","institution_ids":["https://openalex.org/I72816309"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5068535306"],"corresponding_institution_ids":["https://openalex.org/I205746353"],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T13114","display_name":"Image Processing Techniques and Applications","score":0.9833999872207642,"subfield":{"id":"https://openalex.org/subfields/2214","display_name":"Media Technology"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T13114","display_name":"Image Processing Techniques and Applications","score":0.9833999872207642,"subfield":{"id":"https://openalex.org/subfields/2214","display_name":"Media Technology"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.002899999963119626,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10531","display_name":"Advanced Vision and Imaging","score":0.0027000000700354576,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/image-stitching","display_name":"image stitching","score":0.8519999980926514},{"id":"https://openalex.org/keywords/wide-field-microscopy","display_name":"wide-field microscopy","score":0.9629999995231628},{"id":"https://openalex.org/keywords/image-registration","display_name":"image registration","score":0.7279999852180481},{"id":"https://openalex.org/keywords/image-correlation","display_name":"image correlation","score":0.9380000233650208},{"id":"https://openalex.org/keywords/autofocus","display_name":"autofocus","score":0.7409999966621399},{"id":"https://openalex.org/keywords/feature-detection","display_name":"feature detection","score":0.6110000014305115},{"id":"https://openalex.org/keywords/polarization-imaging","display_name":"polarization imaging","score":0.7860000133514404},{"id":"https://openalex.org/keywords/histology-slides","display_name":"histology slides","score":0.6449999809265137}],"concepts":[{"id":"https://openalex.org/C147080431","wikidata":"https://www.wikidata.org/wiki/Q1074953","display_name":"Microscopy","level":2,"score":0.5592357516288757},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5080842971801758},{"id":"https://openalex.org/C9652623","wikidata":"https://www.wikidata.org/wiki/Q190109","display_name":"Field (mathematics)","level":2,"score":0.500563383102417},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.4522285759449005},{"id":"https://openalex.org/C31972630","wikidata":"https://www.wikidata.org/wiki/Q844240","display_name":"Computer vision","level":1,"score":0.41420263051986694},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.40788814425468445},{"id":"https://openalex.org/C121684516","wikidata":"https://www.wikidata.org/wiki/Q7600677","display_name":"Computer graphics (images)","level":1,"score":0.36962413787841797},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.2181183397769928},{"id":"https://openalex.org/C120665830","wikidata":"https://www.wikidata.org/wiki/Q14620","display_name":"Optics","level":1,"score":0.2142990231513977},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.14504873752593994},{"id":"https://openalex.org/C202444582","wikidata":"https://www.wikidata.org/wiki/Q837863","display_name":"Pure mathematics","level":1,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.17918/etd-3214","doi":"https://doi.org/10.17918/etd-3214","is_oa":true,"landing_page_url":"https://doi.org/10.17918/etd-3214","pdf_url":null,"source":null,"license":"public-domain","license_id":"https://openalex.org/licenses/public-domain","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Drexel University","raw_type":"dissertation"},{"id":"pmh:oai:alma.01DRXU_INST:11321337770004721","doi":null,"is_oa":true,"landing_page_url":"https://researchdiscovery.drexel.edu/esploro/outputs/graduate/Improving-an-automated-mosaicing-algorithm-for/991014632231804721","pdf_url":null,"source":{"id":"https://openalex.org/S7407064447","display_name":"iDEA - Drexel University Institutional Repository","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Masters Thesis"}],"best_oa_location":{"id":"doi:10.17918/etd-3214","doi":"https://doi.org/10.17918/etd-3214","is_oa":true,"landing_page_url":"https://doi.org/10.17918/etd-3214","pdf_url":null,"source":null,"license":"public-domain","license_id":"https://openalex.org/licenses/public-domain","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Drexel University","raw_type":"dissertation"},"sustainable_development_goals":[],"study_designs":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":0,"referenced_works":[],"related_works":["https://openalex.org/W1540969256","https://openalex.org/W2132288860","https://openalex.org/W2733287843","https://openalex.org/W2217187831","https://openalex.org/W3120802558","https://openalex.org/W7164888022","https://openalex.org/W4403028944","https://openalex.org/W2049005469","https://openalex.org/W1983001103","https://openalex.org/W1776742496"],"abstract_inverted_index":{"Knowledge":[0],"of":[1,6,14,50,74,86,109,166,243,261,283,347,359,371,381,386,402],"the":[2,152,244,262,274,289,332,345,348,352,360,364],"complex":[3],"fiber":[4],"structures":[5,32],"soft":[7],"tissues":[8],"can":[9],"lead":[10,266],"to":[11,20,70,226,249,267,287,292,310,316,328],"greater":[12],"understanding":[13],"basic":[15,168],"structure-function":[16],"relationships,":[17],"and":[18,26,123,144,184,188,201,251,295,302,342,363,376,391],"potentially,":[19],"improvements":[21],"in":[22,33,177,194,222,351],"tissue":[23,113],"engineered":[24],"constructs":[25],"micro-repair":[27],"techniques.":[28],"Unfortunately,":[29],"imaging":[30,49,96,110],"these":[31],"fresh,":[34],"whole-tissue":[35],"samples":[36,114],"is":[37,107,206],"difficult,":[38],"mainly":[39],"because":[40],"current":[41],"microscopes":[42],"are":[43,79,257],"designed":[44],"for":[45,160,182,217,253,278,321],"small-scale,":[46],"narrow":[47],"field":[48],"thin,":[51],"slide-mounted":[52],"specimens.":[53],"The":[54,126,163,196,214,281,306,379,395],"currently":[55],"available":[56],"wide-field":[57,95],"microscopy":[58,102,361],"systems":[59],"depend":[60],"on":[61],"high-precision":[62],"motorized":[63],"(using":[64],"expensive":[65],"servo":[66],"motors)":[67],"stage":[68,185],"positioning":[69,134],"make":[71,399],"a":[72,83,100,129,140,209],"montage":[73,387],"image":[75,87,142,218,269,276,297],"tiles.":[76,88],"However,":[77],"they":[78],"time":[80],"consuming":[81],"requiring":[82],"large":[84,228],"number":[85],"To":[89,355],"achieve":[90,293],"high":[91,93,236],"speed,":[92],"resolution,":[94],"at":[97],"low":[98],"cost,":[99],"novel":[101,141,210,324],"system":[103,127,290,362,382,403],"was":[104,220,246,286,314,326],"developed":[105,327],"that":[106],"capable":[108],"thicker,":[111],"fresh":[112],"as":[115,117,232,234],"well":[116,233],"prepared":[118],"slides":[119,373],"using":[120,208,299,374],"both,":[121],"normal":[122,375],"polarized":[124,377],"light.":[125,378],"uses":[128],"low-precision,":[130],"two":[131,167],"stepper":[132,149],"motor":[133,150,186],"system,":[135],"maintaining":[136],"sub-pixel":[137],"accuracy":[138],"via":[139],"correlation":[143],"registration":[145],"algorithm.":[146,213],"A":[147,171,190,239,323],"third":[148],"controlling":[151],"fine":[153],"focus":[154],"knob":[155],"enables":[156],"Z":[157],"axis":[158],"control":[159],"automatic":[161],"focus.":[162],"software":[164],"consists":[165],"components:":[169],"1.":[170],"graphical":[172],"user":[173],"interface":[174],"(GUI)":[175],"programmed":[176,193],"Visual":[178],"Basic":[179],".":[180],"NET":[181],"camera":[183],"control,":[187],"2.":[189],"\"tiling/stitching\"":[191],"algorithm":[192,216,245,309,325],"MATLAB\u00ae.":[195],"tiling":[197],"program":[198],"incorporates":[199],"distortion":[200],"luminosity":[202],"correction":[203],"algorithms.":[204],"Autofocus":[205],"achieved":[207],"edge-based":[211],"focusing":[212],"elementary":[215],"stitching":[219,270,298,341,365],"limited":[221],"its":[223,227,247],"use":[224,401],"owing":[225],"dynamic":[229,294],"memory":[230],"requirement":[231],"significantly":[235],"computational":[237],"time.":[238],"more":[240,393],"challenging":[241],"limitation":[242],"inability":[248],"detect":[250,317],"account":[252],"white":[254,336],"spaces":[255,337],"which":[256,271],"feature-less":[258],"'blank'":[259],"regions":[260,334],"image.":[263,354],"This":[264],"would":[265,272],"erroneous":[268],"render":[273],"final":[275,353],"ineffectual":[277],"data":[279],"analysis.":[280],"objective":[282],"this":[284],"work":[285],"optimize":[288],"algorithms":[291,383,397],"accurate":[296,390],"improved":[300],"feature":[301],"'blank":[303],"area'":[304],"detection.":[305],"point":[307],"selection":[308],"correlate":[311],"pixel":[312],"windows":[313],"optimized":[315,396],"most":[318],"favorable":[319],"features":[320],"tracking.":[322],"'flag'":[329],"or":[330],"mark":[331],"overlapping":[333],"with":[335],"(no":[338],"information)":[339],"while":[340],"then,":[343],"estimating":[344],"position":[346],"flagged":[349],"tiles":[350],"demonstrate":[356],"superior":[357],"usability":[358],"algorithm,":[366],"we":[367],"imaged":[368],"distinct":[369],"sets":[370],"histology":[372],"optimization":[380],"made":[384],"reconstruction":[385],"images":[388],"faster,":[389],"much":[392],"reliable.":[394],"also":[398],"judicious":[400],"resources.":[404]},"counts_by_year":[],"updated_date":"2026-09-03T10:48:47.769340","created_date":"2022-01-25T00:00:00"}
