{"id":"https://openalex.org/W4200543804","doi":"https://doi.org/10.1093/jaoacint/qsab146","title":"Validation of the 3M\u2122 Molecular Detection Assay 2 - STEC Gene Screen (stx and eae) for the Detection of Shiga Toxin Gene (stx and eae) in Fresh Raw Beef Trim, Fresh Raw Ground Beef and Fresh Spinach: AOAC Performance Tested MethodSM 071902","display_name":"Validation of the 3M\u2122 Molecular Detection Assay 2 - STEC Gene Screen (stx and eae) for the Detection of Shiga Toxin Gene (stx and eae) in Fresh Raw Beef Trim, Fresh Raw Ground Beef and Fresh Spinach: AOAC Performance Tested MethodSM 071902","publication_year":2021,"publication_date":"2021-12-08","ids":{"openalex":"https://openalex.org/W4200543804","doi":"https://doi.org/10.1093/jaoacint/qsab146","pmid":"https://pubmed.ncbi.nlm.nih.gov/34894241","pmcid":"https://www.ncbi.nlm.nih.gov/pmc/articles/9046965"},"language":"en","primary_location":{"id":"doi:10.1093/jaoacint/qsab146","doi":"https://doi.org/10.1093/jaoacint/qsab146","is_oa":true,"landing_page_url":"https://doi.org/10.1093/jaoacint/qsab146","pdf_url":"https://academic.oup.com/jaoac/article-pdf/105/3/902/43480324/qsab146.pdf","source":{"id":"https://openalex.org/S103486911","display_name":"Journal of AOAC International","issn_l":"1060-3271","issn":["1060-3271","1944-7922"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["anvur-scientific","cwts-core","dongbi-b","jufo-1","medline","norway-1","poland-40","russia-white-list-2","vabb-shw"],"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of AOAC INTERNATIONAL","raw_type":"journal-article"},"volume":null,"type":"article","is_traditional":true,"indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://academic.oup.com/jaoac/article-pdf/105/3/902/43480324/qsab146.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5089794415","display_name":"Micki L Rosauer","orcid":"https://orcid.org/0000-0001-9621-9645","observed_orcids":["https://orcid.org/0000-0001-9621-9645"]},"institutions":[{"id":"https://openalex.org/I1340755506","display_name":"3M (United States)","ror":"https://ror.org/00mgss748","country_code":"US","type":"company","lineage":["https://openalex.org/I1340755506"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Micki L Rosauer","raw_affiliation_strings":["3M Company, Food Safety Department, St. Paul, MN 55144-1000, USA"],"raw_orcid":"https://orcid.org/0000-0001-9621-9645","affiliations":[{"raw_affiliation_string":"3M Company, Food Safety Department, St. Paul, MN 55144-1000, USA","institution_ids":["https://openalex.org/I1340755506"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5004509415","display_name":"Christina Barnes","orcid":"https://orcid.org/0000-0001-7228-6763","observed_orcids":["https://orcid.org/0000-0001-7228-6763"]},"institutions":[{"id":"https://openalex.org/I1340755506","display_name":"3M (United States)","ror":"https://ror.org/00mgss748","country_code":"US","type":"company","lineage":["https://openalex.org/I1340755506"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Christina Barnes","raw_affiliation_strings":["3M Company, Food Safety Department, St. Paul, MN 55144-1000, USA"],"raw_orcid":"https://orcid.org/0000-0001-7228-6763","affiliations":[{"raw_affiliation_string":"3M Company, Food Safety Department, St. Paul, MN 55144-1000, USA","institution_ids":["https://openalex.org/I1340755506"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5012437530","display_name":"Karen M Silbernagel","orcid":"https://orcid.org/0000-0002-4392-3302","observed_orcids":["https://orcid.org/0000-0002-4392-3302"]},"institutions":[{"id":"https://openalex.org/I1340755506","display_name":"3M (United States)","ror":"https://ror.org/00mgss748","country_code":"US","type":"company","lineage":["https://openalex.org/I1340755506"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Karen M Silbernagel","raw_affiliation_strings":["3M Company, Food Safety Department, St. Paul, MN 55144-1000, USA"],"raw_orcid":"https://orcid.org/0000-0002-4392-3302","affiliations":[{"raw_affiliation_string":"3M Company, Food Safety Department, St. Paul, MN 55144-1000, USA","institution_ids":["https://openalex.org/I1340755506"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5060994633","display_name":"Kateland M Koch","orcid":null,"observed_orcids":[]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Kateland M Koch","raw_affiliation_strings":["Research and Development, Q Laboratories, Cincinnati, OH 45204, USA"],"raw_orcid":"https://orcid.org/0000-0002-5300-6751","affiliations":[{"raw_affiliation_string":"Research and Development, Q Laboratories, Cincinnati, OH 45204, USA","institution_ids":[]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":["https://openalex.org/A5089794415"],"corresponding_institution_ids":["https://openalex.org/I1340755506"],"apc_list":{"value":1605,"currency":"USD","value_usd":1605},"apc_paid":{"value":1605,"currency":"USD","value_usd":1605},"fwci":0.0,"has_fulltext":true,"cited_by_count":0,"citation_normalized_percentile":{"value":0.0,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"105","issue":"3","first_page":"902","last_page":"914"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10943","display_name":"Escherichia coli research studies","score":0.9843999743461609,"subfield":{"id":"https://openalex.org/subfields/2404","display_name":"Microbiology"},"field":{"id":"https://openalex.org/fields/24","display_name":"Immunology and Microbiology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10943","display_name":"Escherichia coli research studies","score":0.9843999743461609,"subfield":{"id":"https://openalex.org/subfields/2404","display_name":"Microbiology"},"field":{"id":"https://openalex.org/fields/24","display_name":"Immunology and Microbiology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10900","display_name":"Listeria monocytogenes in Food Safety","score":0.008799999952316284,"subfield":{"id":"https://openalex.org/subfields/1106","display_name":"Food Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11957","display_name":"Food Safety and Hygiene","score":0.002400000113993883,"subfield":{"id":"https://openalex.org/subfields/1106","display_name":"Food Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/shiga-toxin-producing-escherichia-coli","display_name":"Shiga toxin-producing Escherichia coli","score":0.9890000224113464},{"id":"https://openalex.org/keywords/stx1","display_name":"stx1","score":0.7009999752044678},{"id":"https://openalex.org/keywords/stx2","display_name":"stx2","score":0.9990000128746033},{"id":"https://openalex.org/keywords/loop-mediated-isothermal-amplification","display_name":"loop-mediated isothermal amplification","score":0.875},{"id":"https://openalex.org/keywords/real-time-lamp","display_name":"real-time LAMP","score":0.7110000252723694},{"id":"https://openalex.org/keywords/raw-ground-beef","display_name":"raw ground beef","score":0.9660000205039978},{"id":"https://openalex.org/keywords/spinach","display_name":"spinach","score":0.8159999847412109},{"id":"https://openalex.org/keywords/foodborne-pathogen-detection","display_name":"foodborne pathogen detection","score":0.7059999704360962},{"id":"https://openalex.org/keywords/methodological-robustness","display_name":"method robustness","score":0.46399998664855957},{"id":"https://openalex.org/keywords/product-stability","display_name":"product stability","score":0.5730000138282776},{"id":"https://openalex.org/keywords/lot-to-lot-variability","display_name":"lot-to-lot variation","score":0.828000009059906}],"concepts":[{"id":"https://openalex.org/C2781001907","wikidata":"https://www.wikidata.org/wiki/Q17916976","display_name":"STX2","level":5,"score":0.7027080059051514},{"id":"https://openalex.org/C2778411228","wikidata":"https://www.wikidata.org/wiki/Q424753","display_name":"Shiga toxin","level":4,"score":0.6675626039505005},{"id":"https://openalex.org/C118815799","wikidata":"https://www.wikidata.org/wiki/Q24723149","display_name":"Intimin","level":5,"score":0.5486215353012085},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.5063570737838745},{"id":"https://openalex.org/C547475151","wikidata":"https://www.wikidata.org/wiki/Q25419","display_name":"Escherichia coli","level":3,"score":0.4660298526287079},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.4481375813484192},{"id":"https://openalex.org/C89423630","wikidata":"https://www.wikidata.org/wiki/Q7193","display_name":"Microbiology","level":1,"score":0.4421464800834656},{"id":"https://openalex.org/C159047783","wikidata":"https://www.wikidata.org/wiki/Q7215","display_name":"Virology","level":1,"score":0.37911662459373474},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.12472525238990784},{"id":"https://openalex.org/C2778910516","wikidata":"https://www.wikidata.org/wiki/Q380136","display_name":"Enterobacteriaceae","level":4,"score":0.09182560443878174}],"mesh":[{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002417","descriptor_name":"Cattle","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005516","descriptor_name":"Food Microbiology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008460","descriptor_name":"Meat","qualifier_ui":"Q000382","qualifier_name":"microbiology","is_major_topic":false},{"descriptor_ui":"D018724","descriptor_name":"Spinacia oleracea","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D022621","descriptor_name":"Shiga Toxin","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D054323","descriptor_name":"Shiga-Toxigenic Escherichia coli","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D060888","descriptor_name":"Real-Time Polymerase Chain Reaction","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1093/jaoacint/qsab146","doi":"https://doi.org/10.1093/jaoacint/qsab146","is_oa":true,"landing_page_url":"https://doi.org/10.1093/jaoacint/qsab146","pdf_url":"https://academic.oup.com/jaoac/article-pdf/105/3/902/43480324/qsab146.pdf","source":{"id":"https://openalex.org/S103486911","display_name":"Journal of AOAC International","issn_l":"1060-3271","issn":["1060-3271","1944-7922"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["anvur-scientific","cwts-core","dongbi-b","jufo-1","medline","norway-1","poland-40","russia-white-list-2","vabb-shw"],"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of AOAC INTERNATIONAL","raw_type":"journal-article"},{"id":"pmid:34894241","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/34894241","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of AOAC International","raw_type":"Journal Article"},{"id":"pmh:oai:pubmedcentral.nih.gov:9046965","doi":null,"is_oa":true,"landing_page_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC9046965/","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"J AOAC Int","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/jaoacint/qsab146","doi":"https://doi.org/10.1093/jaoacint/qsab146","is_oa":true,"landing_page_url":"https://doi.org/10.1093/jaoacint/qsab146","pdf_url":"https://academic.oup.com/jaoac/article-pdf/105/3/902/43480324/qsab146.pdf","source":{"id":"https://openalex.org/S103486911","display_name":"Journal of AOAC International","issn_l":"1060-3271","issn":["1060-3271","1944-7922"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["anvur-scientific","cwts-core","dongbi-b","jufo-1","medline","norway-1","poland-40","russia-white-list-2","vabb-shw"],"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of AOAC INTERNATIONAL","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/2","display_name":"Zero hunger","score":0.8409000039100647},{"id":"https://metadata.un.org/sdg/3","display_name":"Good health and well-being","score":0.4043000042438507}],"study_designs":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320307785","display_name":"3M","ror":"https://ror.org/00mgss748"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4200543804.pdf","grobid_xml":"https://content.openalex.org/works/W4200543804.grobid-xml"},"referenced_works_count":3,"referenced_works":["https://openalex.org/W2026084043","https://openalex.org/W2099906854","https://openalex.org/W2547506757"],"related_works":["https://openalex.org/W4200037549","https://openalex.org/W4211034538","https://openalex.org/W4210988363","https://openalex.org/W4283331539","https://openalex.org/W3198488870","https://openalex.org/W2980658135","https://openalex.org/W2430670213","https://openalex.org/W3121354567","https://openalex.org/W1739227064","https://openalex.org/W3204900225"],"abstract_inverted_index":{"BACKGROUND:":[0],"The":[1,60,101,157,226,266],"3M\u2122":[2],"Molecular":[3,29,62,103,159,233,268],"Detection":[4,30,63,104,160,234,269],"Assay":[5,64,105,161,235,270],"2":[6,65,106,162,236,271],"-":[7,66,107,163,237,272],"STEC":[8,67,108,164,238,255,273],"Gene":[9,68,109,165,239,274],"Screen":[10,69,110,166,240,275],"(stx":[11,70,111,167,241,276],"and":[12,35,45,71,89,112,124,136,141,146,168,182,186,215,242,251,263,277,285,297],"eae)":[13,72,113,169,243,278],"method":[14,73,247,279],"is":[15,244,280],"based":[16],"on":[17],"gene":[18,41,47],"amplification":[19,25],"using":[20],"real":[21],"time":[22],"loop-mediated":[23],"isothermal":[24],"with":[26,177],"the":[27,33,97,118,143,183,193,210,222,231,249,283],"3M":[28,61,102,158,232,267],"System":[31],"for":[32,76,131,154,248,282],"rapid":[34,250,284],"specific":[36,252,286],"detection":[37,253,287],"of":[38,121,172,189,254,288],"Shiga":[39,50],"toxin":[40],"(stx1":[42],"and/or":[43,179],"stx2)":[44],"intimin":[46],"(eae)":[48],"from":[49,192],"toxin-producing":[51],"enterohemorrhagic":[52],"Escherichia":[53],"coli":[54,175],"(STEC)":[55],"in":[56,202,256,290],"enriched":[57],"foods.":[58],"OBJECTIVE:":[59],"was":[74],"evaluated":[75],"AOAC\u00ae":[77],"Performance":[78],"Tested":[79],"MethodsSM":[80],"certification.":[81],"METHODS:":[82],"Matrix":[83],"studies,":[84],"inclusivity/exclusivity,":[85],"robustness,":[86],"product":[87],"stability,":[88],"lot-to-lot":[90],"variability":[91],"testing":[92,197,217],"were":[93],"conducted":[94],"to":[95,117,142],"assess":[96],"method's":[98],"performance.":[99,212],"RESULTS:":[100],"demonstrated":[114,218],"equivalent":[115],"results":[116],"US":[119,144],"Department":[120],"Agriculture-Food":[122],"Safety":[123],"Inspection":[125],"Service":[126],"Microbiology":[127],"Laboratory":[128],"Guidebook":[129],"5C.00":[130],"fresh":[132,137,155],"raw":[133,138,257,260,291,294],"beef":[134,258,292],"trim":[135],"ground":[139,261,295],"beef,":[140,262,296],"Food":[145],"Drug":[147],"Administration":[148],"Bacteriological":[149],"Analytical":[150],"Manual":[151],"Chapter":[152],"4A":[153],"spinach.":[156,264,298],"detected":[170,187],"50":[171,173],"E.":[174],"strains":[176,191],"stx1":[178],"stx2":[180],"genes,":[181],"eae":[184],"gene,":[185],"zero":[188],"40":[190],"exclusivity":[194],"panel.":[195],"Robustness":[196],"indicated":[198],"that":[199,230],"small":[200],"variations":[201],"critical":[203],"test":[204],"parameters":[205],"did":[206],"not":[207],"adversely":[208],"affect":[209],"assay's":[211],"Product":[213],"consistency":[214],"stability":[216],"no":[219],"differences":[220],"between":[221],"lots":[223],"evaluated.":[224],"CONCLUSION:":[225],"data":[227],"collected":[228],"demonstrates":[229],"a":[245],"reliable":[246],"trim,":[259,293],"HIGHLIGHTS:":[265],"suitable":[281],"STECs":[289]},"counts_by_year":[],"updated_date":"2026-11-10T11:39:43.021295","created_date":"2021-12-31T00:00:00"}
