{"id":"https://openalex.org/W4200399166","doi":"https://doi.org/10.3390/horticulturae7120592","title":"Comprehensive Analysis of Jumonji Domain C Family from Citrus grandis and Expression Profilings in the Exocarps of \u201cHuajuhong\u201d (Citrus grandis \u201cTomentosa\u201d) during Various Development Stages","display_name":"Comprehensive Analysis of Jumonji Domain C Family from Citrus grandis and Expression Profilings in the Exocarps of \u201cHuajuhong\u201d (Citrus grandis \u201cTomentosa\u201d) during Various Development Stages","publication_year":2021,"publication_date":"2021-12-20","ids":{"openalex":"https://openalex.org/W4200399166","doi":"https://doi.org/10.3390/horticulturae7120592"},"language":"en","primary_location":{"id":"doi:10.3390/horticulturae7120592","doi":"https://doi.org/10.3390/horticulturae7120592","is_oa":true,"landing_page_url":"https://doi.org/10.3390/horticulturae7120592","pdf_url":"https://www.mdpi.com/2311-7524/7/12/592/pdf?version=1640018113","source":{"id":"https://openalex.org/S2737241975","display_name":"Horticulturae","issn_l":"2311-7524","issn":["2311-7524"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["cwts-core","doaj","norway-1","poland-20","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310310987","host_organization_name":"Multidisciplinary Digital Publishing Institute","host_organization_lineage":["https://openalex.org/P4310310987"],"host_organization_lineage_names":["Multidisciplinary Digital Publishing Institute"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Horticulturae","raw_type":"journal-article"},"parent_works":[],"lineage":["https://openalex.org/W4200399166"],"child_works_count":0,"type":"article","is_traditional":true,"indexed_in":["crossref","doaj"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://www.mdpi.com/2311-7524/7/12/592/pdf?version=1640018113","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5112853480","display_name":"Yuzhen Tian","orcid":"https://orcid.org/0000-0002-0921-8431","observed_orcids":["https://orcid.org/0000-0002-0921-8431"]},"institutions":[{"id":"https://openalex.org/I4210099004","display_name":"Guangdong Academy of Agricultural Sciences","ror":"https://ror.org/01rkwtz72","country_code":"CN","type":"government","lineage":["https://openalex.org/I4210099004"]},{"id":"https://openalex.org/I4210151987","display_name":"Ministry of Agriculture and Rural Affairs","ror":"https://ror.org/05ckt8b96","country_code":"CN","type":"government","lineage":["https://openalex.org/I4210127390","https://openalex.org/I4210151987"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yuzhen Tian","raw_affiliation_strings":["Guangdong Provincial Key Laboratory of Tropical and Subtropical Fruit Tree Research, Guangzhou 510640, China","Institute of Fruit Tree Research, Guangdong Academy of Agricultural Sciences, Guangzhou 510640, China","Key Laboratory of South Subtropical Fruit Biology and Genetic Resource Utilization, Ministry of Agriculture and Rural Affairs, Guangzhou 510640, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Guangdong Provincial Key Laboratory of Tropical and Subtropical Fruit Tree Research, Guangzhou 510640, China","institution_ids":[]},{"raw_affiliation_string":"Institute of Fruit Tree Research, Guangdong Academy of Agricultural Sciences, Guangzhou 510640, China","institution_ids":["https://openalex.org/I4210099004"]},{"raw_affiliation_string":"Key Laboratory of South Subtropical Fruit Biology and Genetic Resource Utilization, Ministry of Agriculture and Rural Affairs, Guangzhou 510640, China","institution_ids":["https://openalex.org/I4210151987"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5062371454","display_name":"Ruiyi Fan","orcid":"https://orcid.org/0000-0003-1616-0423","observed_orcids":["https://orcid.org/0000-0003-1616-0423"]},"institutions":[{"id":"https://openalex.org/I4210099004","display_name":"Guangdong Academy of Agricultural Sciences","ror":"https://ror.org/01rkwtz72","country_code":"CN","type":"government","lineage":["https://openalex.org/I4210099004"]},{"id":"https://openalex.org/I4210151987","display_name":"Ministry of Agriculture and Rural Affairs","ror":"https://ror.org/05ckt8b96","country_code":"CN","type":"government","lineage":["https://openalex.org/I4210127390","https://openalex.org/I4210151987"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Ruiyi Fan","raw_affiliation_strings":["Guangdong Provincial Key Laboratory of Tropical and Subtropical Fruit Tree Research, Guangzhou 510640, China","Institute of Fruit Tree Research, Guangdong Academy of Agricultural Sciences, Guangzhou 510640, China","Key Laboratory of South Subtropical Fruit Biology and Genetic Resource Utilization, Ministry of Agriculture and Rural Affairs, Guangzhou 510640, China"],"raw_orcid":"https://orcid.org/0000-0003-1616-0423","affiliations":[{"raw_affiliation_string":"Guangdong Provincial Key Laboratory of Tropical and Subtropical Fruit Tree Research, Guangzhou 510640, China","institution_ids":[]},{"raw_affiliation_string":"Institute of Fruit Tree Research, Guangdong Academy of Agricultural Sciences, Guangzhou 510640, China","institution_ids":["https://openalex.org/I4210099004"]},{"raw_affiliation_string":"Key Laboratory of South Subtropical Fruit Biology and Genetic Resource Utilization, Ministry of Agriculture and Rural Affairs, Guangzhou 510640, China","institution_ids":["https://openalex.org/I4210151987"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5044740350","display_name":"Jiwu Zeng","orcid":"https://orcid.org/0000-0002-3411-2460","observed_orcids":["https://orcid.org/0000-0002-3411-2460"]},"institutions":[{"id":"https://openalex.org/I4210099004","display_name":"Guangdong Academy of Agricultural Sciences","ror":"https://ror.org/01rkwtz72","country_code":"CN","type":"government","lineage":["https://openalex.org/I4210099004"]},{"id":"https://openalex.org/I4210151987","display_name":"Ministry of Agriculture and Rural Affairs","ror":"https://ror.org/05ckt8b96","country_code":"CN","type":"government","lineage":["https://openalex.org/I4210127390","https://openalex.org/I4210151987"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Jiwu Zeng","raw_affiliation_strings":["Guangdong Provincial Key Laboratory of Tropical and Subtropical Fruit Tree Research, Guangzhou 510640, China","Institute of Fruit Tree Research, Guangdong Academy of Agricultural Sciences, Guangzhou 510640, China","Key Laboratory of South Subtropical Fruit Biology and Genetic Resource Utilization, Ministry of Agriculture and Rural Affairs, Guangzhou 510640, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Guangdong Provincial Key Laboratory of Tropical and Subtropical Fruit Tree Research, Guangzhou 510640, China","institution_ids":[]},{"raw_affiliation_string":"Institute of Fruit Tree Research, Guangdong Academy of Agricultural Sciences, Guangzhou 510640, China","institution_ids":["https://openalex.org/I4210099004"]},{"raw_affiliation_string":"Key Laboratory of South Subtropical Fruit Biology and Genetic Resource Utilization, Ministry of Agriculture and Rural Affairs, Guangzhou 510640, China","institution_ids":["https://openalex.org/I4210151987"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5044740350","https://openalex.org/A5062371454"],"corresponding_institution_ids":["https://openalex.org/I4210099004","https://openalex.org/I4210151987"],"apc_list":{"value":1400,"currency":"CHF","value_usd":1512},"apc_paid":{"value":1400,"currency":"CHF","value_usd":1512},"fwci":0.5587,"has_fulltext":true,"cited_by_count":7,"citation_normalized_percentile":{"value":0.61614678,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":88,"max":95},"biblio":{"volume":"7","issue":"12","first_page":"592","last_page":"592"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10184","display_name":"Plant Molecular Biology Research","score":0.9779999852180481,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10184","display_name":"Plant Molecular Biology Research","score":0.9779999852180481,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10434","display_name":"Chromosomal and Genetic Variations","score":0.005900000222027302,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11237","display_name":"Plant Gene Expression Analysis","score":0.004100000020116568,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/jumonji-c-domain","display_name":"Jumonji C domain","score":0.8349999785423279},{"id":"https://openalex.org/keywords/pomelo","display_name":"pomelo","score":0.9610000252723694},{"id":"https://openalex.org/keywords/exocarp","display_name":"exocarp","score":0.8190000057220459},{"id":"https://openalex.org/keywords/fruit-development","display_name":"fruit development","score":0.6299999952316284},{"id":"https://openalex.org/keywords/gene-expression-profiling","display_name":"gene expression profiling","score":0.8389999866485596},{"id":"https://openalex.org/keywords/phylogenetic-classification","display_name":"phylogenetic classification","score":0.8029999732971191},{"id":"https://openalex.org/keywords/kdm4","display_name":"KDM4","score":0.9959999918937683},{"id":"https://openalex.org/keywords/kdm5","display_name":"KDM5","score":0.9990000128746033},{"id":"https://openalex.org/keywords/jmjd6","display_name":"JMJD6","score":0.824999988079071},{"id":"https://openalex.org/keywords/cis-regulatory-elements","display_name":"cis-regulatory elements","score":0.7960000038146973},{"id":"https://openalex.org/keywords/abscisic-acid-responsive-elements","display_name":"ABRE","score":0.953000009059906},{"id":"https://openalex.org/keywords/promoter-analysis","display_name":"promoter analysis","score":0.7739999890327454},{"id":"https://openalex.org/keywords/protein-domain-structure","display_name":"protein domain structure","score":0.3720000088214874}],"concepts":[{"id":"https://openalex.org/C193252679","wikidata":"https://www.wikidata.org/wiki/Q242125","display_name":"Phylogenetic tree","level":3,"score":0.7404312491416931},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.6705836057662964},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.6168220043182373},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.5823034048080444},{"id":"https://openalex.org/C2779591172","wikidata":"https://www.wikidata.org/wiki/Q332211","display_name":"Abscisic acid","level":3,"score":0.5269761085510254},{"id":"https://openalex.org/C2992072516","wikidata":"https://www.wikidata.org/wiki/Q171184","display_name":"Phylogenetic relationship","level":4,"score":0.4740706980228424},{"id":"https://openalex.org/C101762097","wikidata":"https://www.wikidata.org/wiki/Q224093","display_name":"Promoter","level":4,"score":0.4324409067630768},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.37412142753601074},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.3048343360424042}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.3390/horticulturae7120592","doi":"https://doi.org/10.3390/horticulturae7120592","is_oa":true,"landing_page_url":"https://doi.org/10.3390/horticulturae7120592","pdf_url":"https://www.mdpi.com/2311-7524/7/12/592/pdf?version=1640018113","source":{"id":"https://openalex.org/S2737241975","display_name":"Horticulturae","issn_l":"2311-7524","issn":["2311-7524"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["cwts-core","doaj","norway-1","poland-20","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310310987","host_organization_name":"Multidisciplinary Digital Publishing Institute","host_organization_lineage":["https://openalex.org/P4310310987"],"host_organization_lineage_names":["Multidisciplinary Digital Publishing Institute"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Horticulturae","raw_type":"journal-article"},{"id":"pmh:oai:doaj.org/article:9d5e0bd6bb68426583f58a3e4ee007bf","doi":null,"is_oa":true,"landing_page_url":"https://doaj.org/article/9d5e0bd6bb68426583f58a3e4ee007bf","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Horticulturae, Vol 7, Iss 12, p 592 (2021)","raw_type":"article"}],"best_oa_location":{"id":"doi:10.3390/horticulturae7120592","doi":"https://doi.org/10.3390/horticulturae7120592","is_oa":true,"landing_page_url":"https://doi.org/10.3390/horticulturae7120592","pdf_url":"https://www.mdpi.com/2311-7524/7/12/592/pdf?version=1640018113","source":{"id":"https://openalex.org/S2737241975","display_name":"Horticulturae","issn_l":"2311-7524","issn":["2311-7524"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["cwts-core","doaj","norway-1","poland-20","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310310987","host_organization_name":"Multidisciplinary Digital Publishing Institute","host_organization_lineage":["https://openalex.org/P4310310987"],"host_organization_lineage_names":["Multidisciplinary Digital Publishing Institute"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Horticulturae","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/2","display_name":"Zero hunger","score":0.5365999937057495}],"study_designs":[],"awards":[{"id":"https://openalex.org/G297000508","display_name":null,"funder_award_id":"32001999","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G7582304009","display_name":null,"funder_award_id":"2019A1515011378","funder_id":"https://openalex.org/F4320337111","funder_display_name":"Basic and Applied Basic Research Foundation of Guangdong Province"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320337111","display_name":"Basic and Applied Basic Research Foundation of Guangdong Province","ror":null}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4200399166.pdf","grobid_xml":"https://content.openalex.org/works/W4200399166.grobid-xml"},"referenced_works_count":45,"referenced_works":["https://openalex.org/W127046385","https://openalex.org/W1604791685","https://openalex.org/W1966421523","https://openalex.org/W1966554737","https://openalex.org/W1976702683","https://openalex.org/W1977243768","https://openalex.org/W1979880724","https://openalex.org/W1992538495","https://openalex.org/W1993723965","https://openalex.org/W2002377333","https://openalex.org/W2006880240","https://openalex.org/W2011005775","https://openalex.org/W2017596496","https://openalex.org/W2026399126","https://openalex.org/W2027613348","https://openalex.org/W2035908878","https://openalex.org/W2041336616","https://openalex.org/W2045846297","https://openalex.org/W2047880543","https://openalex.org/W2052999384","https://openalex.org/W2060764144","https://openalex.org/W2067121492","https://openalex.org/W2068157186","https://openalex.org/W2097842908","https://openalex.org/W2099183412","https://openalex.org/W2100849967","https://openalex.org/W2103255565","https://openalex.org/W2119205648","https://openalex.org/W2137798131","https://openalex.org/W2150413484","https://openalex.org/W2320892223","https://openalex.org/W2513158531","https://openalex.org/W2549390890","https://openalex.org/W2791940740","https://openalex.org/W2811298311","https://openalex.org/W2891071640","https://openalex.org/W2914390180","https://openalex.org/W2923442306","https://openalex.org/W2941316273","https://openalex.org/W2983779906","https://openalex.org/W2998747926","https://openalex.org/W3036319615","https://openalex.org/W3043611738","https://openalex.org/W3106765671","https://openalex.org/W4212766227"],"related_works":["https://openalex.org/W4280520624","https://openalex.org/W4389671770","https://openalex.org/W2359452041","https://openalex.org/W4411989993","https://openalex.org/W2996952031","https://openalex.org/W4312367953","https://openalex.org/W2888829051","https://openalex.org/W6991702599","https://openalex.org/W3157610328","https://openalex.org/W4318320901"],"abstract_inverted_index":{"Citrus":[0],"grandis":[1,137,147],"\u201cTomentosa\u201d":[2,148],"(\u201cHuajuhong\u201d)":[3],"is":[4],"a":[5,13,128],"famous":[6],"Traditional":[7],"Chinese":[8],"Medicine.":[9],"In":[10],"this":[11],"study,":[12],"total":[14],"of":[15,36,74,97,104,107,131,145],"18":[16,28,75,98],"jumonji":[17],"C":[18],"(JMJC)":[19],"domain-containing":[20,133],"proteins":[21,134],"were":[22,30,67,78,113,117],"identified":[23],"from":[24],"C.":[25,37,136,146],"grandis.":[26,38],"The":[27,57,115,124],"CgJMJCs":[29,99],"unevenly":[31],"located":[32],"on":[33,71,89],"six":[34],"chromosomes":[35],"Phylogenetic":[39],"analysis":[40],"revealed":[41],"that":[42],"they":[43],"could":[44],"be":[45],"classified":[46],"into":[47],"five":[48,65],"groups,":[49],"namely":[50],"KDM3,":[51],"KDM4,":[52],"KDM5,":[53],"JMJC,":[54],"and":[55,60,81,138],"JMJD6.":[56],"domain":[58],"structures":[59],"motif":[61],"architectures":[62],"in":[63,101,135,142],"the":[64,72,82,94,102,143],"groups":[66],"diversified.":[68],"Cis-acting":[69],"elements":[70],"promoters":[73],"CgJMJC":[76,91],"genes":[77],"also":[79],"investigated,":[80],"abscisic":[83],"acid-responsive":[84],"element":[85],"(ABRE)":[86],"was":[87],"distributed":[88],"15":[90],"genes.":[92],"Furthermore,":[93],"expression":[95,140],"profiles":[96],"members":[100],"exocarps":[103,144],"three":[105,150],"varieties":[106,151],"\u201cHuajuhong\u201d,":[108],"for":[109,149],"different":[110],"developmental":[111],"stages,":[112],"examined.":[114],"results":[116],"validated":[118],"by":[119],"quantitative":[120],"real-time":[121],"PCR":[122],"(qRT-PCR).":[123],"present":[125],"study":[126],"provides":[127],"comprehensive":[129],"characterization":[130],"JMJC":[132],"their":[139],"patterns":[141],"with":[152],"various":[153],"development":[154],"stages.":[155]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":2},{"year":2024,"cited_by_count":2},{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":1}],"updated_date":"2026-11-14T11:04:58.165337","created_date":"2021-12-31T00:00:00"}