{"id":"https://openalex.org/W372333932","doi":"https://doi.org/10.1007/978-1-4939-2620-6_16","title":"Detection and Characterization of Viral Species/Subspecies Using Isothermal Recombinase Polymerase Amplification (RPA) Assays","display_name":"Detection and Characterization of Viral Species/Subspecies Using Isothermal Recombinase Polymerase Amplification (RPA) Assays","publication_year":2015,"publication_date":"2015-01-01","ids":{"openalex":"https://openalex.org/W372333932","doi":"https://doi.org/10.1007/978-1-4939-2620-6_16","mag":"372333932","pmid":"https://pubmed.ncbi.nlm.nih.gov/25981257"},"language":"en","primary_location":{"id":"doi:10.1007/978-1-4939-2620-6_16","doi":"https://doi.org/10.1007/978-1-4939-2620-6_16","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-1-4939-2620-6_16","pdf_url":null,"source":{"id":"https://openalex.org/S4210172139","display_name":"Methods in molecular biology","issn_l":"1064-3745","issn":["1064-3745","1940-6029"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["cwts-core","jufo-1","ki-jl-1","medline","norway-1","poland-70","russia-white-list-3","vabb-shw"],"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Methods in Molecular Biology","raw_type":"book-chapter"},"volume":{"id":"https://openalex.org/W4248945636","display_name":"Plant Pathology"},"type":"book-chapter","is_traditional":true,"indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5082018270","display_name":"Laurent Glais","orcid":"https://orcid.org/0000-0002-2721-3124","observed_orcids":["https://orcid.org/0000-0002-2721-3124"]},"institutions":[{"id":"https://openalex.org/I4210141755","display_name":"Institut de G\u00e9n\u00e9tique, Environnement et Protection des Plantes","ror":"https://ror.org/038kxsm48","country_code":"FR","type":"facility","lineage":["https://openalex.org/I2800285241","https://openalex.org/I4210088668","https://openalex.org/I4210117091","https://openalex.org/I4210141755","https://openalex.org/I4399657933","https://openalex.org/I56067802"]}],"countries":["FR"],"is_corresponding":true,"raw_author_name":"Laurent Glais","raw_affiliation_strings":["INRA, UMR1349 IGEPP, BP 35327, Le Rheu, 35653, France, laurent.glais@rennes.inra.fr","INRA, UMR1349 IGEPP, BP 35327, Le Rheu, 35653, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"INRA, UMR1349 IGEPP, BP 35327, Le Rheu, 35653, France, laurent.glais@rennes.inra.fr","institution_ids":["https://openalex.org/I4210141755"]},{"raw_affiliation_string":"INRA, UMR1349 IGEPP, BP 35327, Le Rheu, 35653, France","institution_ids":["https://openalex.org/I4210141755"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5038434925","display_name":"Emmanuel Jacquot","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I24906876","display_name":"Institut Agro Montpellier","ror":"https://ror.org/03rnk6m14","country_code":"FR","type":"education","lineage":["https://openalex.org/I24906876","https://openalex.org/I4210117091","https://openalex.org/I4399657933"]},{"id":"https://openalex.org/I4210087514","display_name":"Biologie et G\u00e9n\u00e9tique des Interactions Plante-Parasite","ror":"https://ror.org/0026vdt21","country_code":"FR","type":"facility","lineage":["https://openalex.org/I131077856","https://openalex.org/I19894307","https://openalex.org/I24906876","https://openalex.org/I2802818602","https://openalex.org/I4210087514","https://openalex.org/I4210088668","https://openalex.org/I4210090127","https://openalex.org/I4210117091","https://openalex.org/I4210131494","https://openalex.org/I4210166444","https://openalex.org/I4399598379","https://openalex.org/I4399657933"]},{"id":"https://openalex.org/I4210088668","display_name":"Institut National de Recherche pour l'Agriculture, l'Alimentation et l'Environnement","ror":"https://ror.org/003vg9w96","country_code":"FR","type":"government","lineage":["https://openalex.org/I4210088668"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Emmanuel Jacquot","raw_affiliation_strings":["INRA-Cirad-SupAgro Montpellier, UMR 385 BGPI, Cirad TA A-54K, Montpellier, 34398, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"INRA-Cirad-SupAgro Montpellier, UMR 385 BGPI, Cirad TA A-54K, Montpellier, 34398, France","institution_ids":["https://openalex.org/I24906876","https://openalex.org/I4210087514","https://openalex.org/I4210088668"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5082018270"],"corresponding_institution_ids":["https://openalex.org/I4210141755"],"apc_list":null,"apc_paid":null,"fwci":4.1959,"has_fulltext":false,"cited_by_count":36,"citation_normalized_percentile":{"value":0.93113275,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":93,"max":99},"biblio":{"volume":"1302","issue":null,"first_page":"207","last_page":"225"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10494","display_name":"Plant Virus Research Studies","score":0.6553000211715698,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10494","display_name":"Plant Virus Research Studies","score":0.6553000211715698,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11393","display_name":"Biosensors and Analytical Detection","score":0.33469998836517334,"subfield":{"id":"https://openalex.org/subfields/2204","display_name":"Biomedical Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11970","display_name":"Molecular Biology Techniques and Applications","score":0.0038999998942017555,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/recombinase-polymerase-amplification","display_name":"recombinase polymerase amplification","score":0.9729999899864197},{"id":"https://openalex.org/keywords/isothermal-amplification","display_name":"isothermal amplification","score":0.9490000009536743},{"id":"https://openalex.org/keywords/virus-detection","display_name":"virus detection","score":0.6399999856948853},{"id":"https://openalex.org/keywords/species-specific-detection","display_name":"species-specific detection","score":0.7820000052452087},{"id":"https://openalex.org/keywords/potato-virus-y","display_name":"potato virus Y","score":0.8560000061988831},{"id":"https://openalex.org/keywords/potyvirus","display_name":"potyvirus","score":0.9879999756813049},{"id":"https://openalex.org/keywords/wheat-dwarf-virus","display_name":"wheat dwarf virus","score":0.9980000257492065},{"id":"https://openalex.org/keywords/mastrevirus","display_name":"Mastrevirus","score":0.9890000224113464},{"id":"https://openalex.org/keywords/plant-viruses","display_name":"plant viruses","score":0.8220000267028809},{"id":"https://openalex.org/keywords/molecular-diagnosis","display_name":"molecular diagnosis","score":0.5329999923706055},{"id":"https://openalex.org/keywords/primer-design","display_name":"primer design","score":0.47999998927116394}],"concepts":[{"id":"https://openalex.org/C139713532","wikidata":"https://www.wikidata.org/wiki/Q17077657","display_name":"Recombinase Polymerase Amplification","level":4,"score":0.979202926158905},{"id":"https://openalex.org/C24107716","wikidata":"https://www.wikidata.org/wiki/Q123619","display_name":"Nucleic acid","level":2,"score":0.6219780445098877},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.5678032040596008},{"id":"https://openalex.org/C2778271344","wikidata":"https://www.wikidata.org/wiki/Q903395","display_name":"Agarose gel electrophoresis","level":3,"score":0.5426176190376282},{"id":"https://openalex.org/C153911025","wikidata":"https://www.wikidata.org/wiki/Q7202","display_name":"Molecular biology","level":1,"score":0.512078583240509},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.4474963843822479},{"id":"https://openalex.org/C82381507","wikidata":"https://www.wikidata.org/wiki/Q416878","display_name":"Polymerase","level":3,"score":0.4343464970588684},{"id":"https://openalex.org/C60635243","wikidata":"https://www.wikidata.org/wiki/Q6675780","display_name":"Loop-mediated isothermal amplification","level":3,"score":0.42407935857772827},{"id":"https://openalex.org/C159047783","wikidata":"https://www.wikidata.org/wiki/Q7215","display_name":"Virology","level":1,"score":0.4069954752922058},{"id":"https://openalex.org/C552990157","wikidata":"https://www.wikidata.org/wiki/Q7430","display_name":"DNA","level":2,"score":0.3891366124153137},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.2104317545890808}],"mesh":[{"descriptor_ui":"D004279","descriptor_name":"DNA, Viral","qualifier_ui":"Q000032","qualifier_name":"analysis","is_major_topic":true},{"descriptor_ui":"D004279","descriptor_name":"DNA, Viral","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D017791","descriptor_name":"Geminiviridae","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":true},{"descriptor_ui":"D017791","descriptor_name":"Geminiviridae","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D017800","descriptor_name":"Potyvirus","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":true},{"descriptor_ui":"D017800","descriptor_name":"Potyvirus","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D021141","descriptor_name":"Nucleic Acid Amplification Techniques","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D045522","descriptor_name":"Recombinases","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true}],"locations_count":3,"locations":[{"id":"doi:10.1007/978-1-4939-2620-6_16","doi":"https://doi.org/10.1007/978-1-4939-2620-6_16","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-1-4939-2620-6_16","pdf_url":null,"source":{"id":"https://openalex.org/S4210172139","display_name":"Methods in molecular biology","issn_l":"1064-3745","issn":["1064-3745","1940-6029"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["cwts-core","jufo-1","ki-jl-1","medline","norway-1","poland-70","russia-white-list-3","vabb-shw"],"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Methods in Molecular Biology","raw_type":"book-chapter"},{"id":"pmid:25981257","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/25981257","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Methods in molecular biology (Clifton, N.J.)","raw_type":"Journal Article"},{"id":"pmh:oai:HAL:hal-01208781v1","doi":null,"is_oa":false,"landing_page_url":"https://hal.science/hal-01208781","pdf_url":null,"source":{"id":"https://openalex.org/S4306402512","display_name":"HAL","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I4405252976","host_organization_name":"Centre pour la Communication Scientifique Directe","host_organization_lineage":["https://openalex.org/I4405252976"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://link.springer.com/protocol/10.1007/978-1-4939-2620-6_15","raw_type":"info:eu-repo/semantics/bookPart"}],"best_oa_location":null,"sustainable_development_goals":[],"study_designs":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":18,"referenced_works":["https://openalex.org/W145376113","https://openalex.org/W297824340","https://openalex.org/W1536519488","https://openalex.org/W1965733735","https://openalex.org/W1972742256","https://openalex.org/W1972934647","https://openalex.org/W1985604865","https://openalex.org/W2003281348","https://openalex.org/W2003285011","https://openalex.org/W2004194585","https://openalex.org/W2010172066","https://openalex.org/W2050373575","https://openalex.org/W2059726111","https://openalex.org/W2149234409","https://openalex.org/W2159277683","https://openalex.org/W2159277875","https://openalex.org/W2160255421","https://openalex.org/W2170011568"],"related_works":["https://openalex.org/W4285270032","https://openalex.org/W2794259445","https://openalex.org/W3161977019","https://openalex.org/W3010531308","https://openalex.org/W2990579540","https://openalex.org/W2916087771","https://openalex.org/W2997364286","https://openalex.org/W2379742646","https://openalex.org/W4280572984","https://openalex.org/W7071089646"],"abstract_inverted_index":null,"counts_by_year":[{"year":2024,"cited_by_count":2},{"year":2023,"cited_by_count":8},{"year":2022,"cited_by_count":5},{"year":2021,"cited_by_count":4},{"year":2020,"cited_by_count":7},{"year":2019,"cited_by_count":4},{"year":2018,"cited_by_count":2},{"year":2017,"cited_by_count":2},{"year":2016,"cited_by_count":2}],"updated_date":"2026-11-04T10:54:05.112534","created_date":"2016-06-24T00:00:00"}