{"id":"https://openalex.org/W334583739","doi":null,"title":"Dynamic Bayesian Network (DBN) with Structure Expectation Maximization (SEM) for Modeling of Gene Network from Time Series Gene Expression Data.","display_name":"Dynamic Bayesian Network (DBN) with Structure Expectation Maximization (SEM) for Modeling of Gene Network from Time Series Gene Expression Data.","publication_year":2006,"publication_date":"2006-01-01","ids":{"openalex":"https://openalex.org/W334583739","mag":"334583739"},"language":"en","primary_location":{"id":"pmh:oai:CiteSeerX.psu:10.1.1.88.9042","doi":null,"is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.88.9042","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://ww1.ucmss.com/books/LFS/CSREA2006/BIC4650.pdf","raw_type":"text"},"volume":null,"type":"article","is_traditional":true,"indexed_in":[],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5100433609","display_name":"Yu Zhang","orcid":"https://orcid.org/0000-0002-7140-5414","observed_orcids":["https://orcid.org/0000-0002-7140-5414"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Yu Zhang","raw_affiliation_strings":[],"raw_orcid":"https://orcid.org/0000-0002-7140-5414","affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5102011846","display_name":"Zhidong Deng","orcid":"https://orcid.org/0000-0001-9970-1023","observed_orcids":["https://orcid.org/0000-0001-9970-1023"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Zhidong Deng","raw_affiliation_strings":[],"raw_orcid":"https://orcid.org/0000-0001-9970-1023","affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5040618438","display_name":"Hongshan Jiang","orcid":"https://orcid.org/0000-0002-9605-2467","observed_orcids":["https://orcid.org/0000-0002-9605-2467"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Hongshan Jiang","raw_affiliation_strings":[],"raw_orcid":"https://orcid.org/0000-0002-9605-2467","affiliations":[]},{"author_position":"last","author":{"id":"https://openalex.org/A5083945632","display_name":"Peifa Jia","orcid":null,"observed_orcids":[]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Peifa Jia","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]}],"institutions":[],"countries_distinct_count":0,"institutions_distinct_count":0,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":0.4491,"has_fulltext":false,"cited_by_count":10,"citation_normalized_percentile":{"value":0.52999141,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":88,"max":95},"biblio":{"volume":null,"issue":null,"first_page":"41","last_page":"47"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9990000128746033,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9990000128746033,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.0003000000142492354,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10497","display_name":"Fungal and yeast genetics research","score":9.999999747378752e-05,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/dynamic-bayesian-networks","display_name":"dynamic Bayesian networks","score":0.8399999737739563},{"id":"https://openalex.org/keywords/gene-regulatory-network-inference","display_name":"gene regulatory network inference","score":0.9129999876022339},{"id":"https://openalex.org/keywords/temporal-gene-expression","display_name":"temporal gene expression","score":0.8460000157356262},{"id":"https://openalex.org/keywords/metabolic-pathway-inference","display_name":"metabolic pathway inference","score":0.597000002861023},{"id":"https://openalex.org/keywords/saccharomyces-cerevisiae","display_name":"Saccharomyces cerevisiae","score":0.9440000057220459},{"id":"https://openalex.org/keywords/cell-cycle-genes","display_name":"cell cycle genes","score":0.8220000267028809},{"id":"https://openalex.org/keywords/missing-data-handling","display_name":"missing data handling","score":0.6309999823570251}],"concepts":[{"id":"https://openalex.org/C82142266","wikidata":"https://www.wikidata.org/wiki/Q3456604","display_name":"Dynamic Bayesian network","level":3,"score":0.9094115495681763},{"id":"https://openalex.org/C33724603","wikidata":"https://www.wikidata.org/wiki/Q812540","display_name":"Bayesian network","level":2,"score":0.756421685218811},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6680194139480591},{"id":"https://openalex.org/C67339327","wikidata":"https://www.wikidata.org/wiki/Q1502576","display_name":"Gene regulatory network","level":4,"score":0.6534168124198914},{"id":"https://openalex.org/C2776214188","wikidata":"https://www.wikidata.org/wiki/Q408386","display_name":"Inference","level":2,"score":0.6112011075019836},{"id":"https://openalex.org/C71983512","wikidata":"https://www.wikidata.org/wiki/Q7915687","display_name":"Variable-order Bayesian network","level":4,"score":0.5290597677230835},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.5227817893028259},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.49446582794189453},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.48974156379699707},{"id":"https://openalex.org/C107673813","wikidata":"https://www.wikidata.org/wiki/Q812534","display_name":"Bayesian probability","level":2,"score":0.4488867521286011},{"id":"https://openalex.org/C8415881","wikidata":"https://www.wikidata.org/wiki/Q6839217","display_name":"Microarray analysis techniques","level":4,"score":0.43767398595809937},{"id":"https://openalex.org/C182081679","wikidata":"https://www.wikidata.org/wiki/Q1275153","display_name":"Expectation\u2013maximization algorithm","level":3,"score":0.4242209792137146},{"id":"https://openalex.org/C160234255","wikidata":"https://www.wikidata.org/wiki/Q812535","display_name":"Bayesian inference","level":3,"score":0.41927802562713623},{"id":"https://openalex.org/C95371953","wikidata":"https://www.wikidata.org/wiki/Q591745","display_name":"DNA microarray","level":4,"score":0.4107239842414856},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.18119782209396362},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.1486366093158722},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.1235416829586029},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.11175879836082458},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.0929139256477356},{"id":"https://openalex.org/C49781872","wikidata":"https://www.wikidata.org/wiki/Q1045555","display_name":"Maximum likelihood","level":2,"score":0.08053267002105713},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"pmh:oai:CiteSeerX.psu:10.1.1.88.9042","doi":null,"is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.88.9042","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://ww1.ucmss.com/books/LFS/CSREA2006/BIC4650.pdf","raw_type":"text"},{"id":"mag:334583739","doi":null,"is_oa":false,"landing_page_url":"https://dblp.uni-trier.de/db/conf/biocomp/biocomp2006.html#ZhangDJJ06","pdf_url":null,"source":{"id":"https://openalex.org/S4306504356","display_name":"BIOCOMP","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["cwts-core"],"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":false,"raw_source_name":"BIOCOMP","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[],"study_designs":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":16,"referenced_works":["https://openalex.org/W89551800","https://openalex.org/W1481919380","https://openalex.org/W1896341954","https://openalex.org/W1981476600","https://openalex.org/W1984196434","https://openalex.org/W1991040778","https://openalex.org/W2008107402","https://openalex.org/W2082982706","https://openalex.org/W2090554117","https://openalex.org/W2095622082","https://openalex.org/W2103453943","https://openalex.org/W2116290764","https://openalex.org/W2136988691","https://openalex.org/W2154755339","https://openalex.org/W2165011536","https://openalex.org/W2611370172"],"related_works":["https://openalex.org/W1604786655","https://openalex.org/W2358920740","https://openalex.org/W2108579152","https://openalex.org/W1481287147","https://openalex.org/W2367314550","https://openalex.org/W2137203368","https://openalex.org/W2107254338","https://openalex.org/W2098136762","https://openalex.org/W2127337389","https://openalex.org/W2121099322"],"abstract_inverted_index":{"Exploring":[0],"gene":[1,31,75],"regulatory":[2,64],"network":[3,20,65],"is":[4,34,85],"a":[5,16],"key":[6],"topic":[7],"in":[8,91],"molecular":[9],"biology.":[10],"In":[11],"this":[12],"paper,":[13],"we":[14],"present":[15],"new":[17,59],"dynamic":[18],"Bayesian":[19,54],"(DBN)":[21],"framework":[22],"embedded":[23],"with":[24,44],"structural":[25],"expectation":[26],"maximization":[27],"(SEM)":[28],"to":[29,61],"model":[30],"relationship.":[32],"It":[33],"well-suited":[35],"for":[36],"analyzing":[37],"the":[38,58,63,67,82,96],"time-series":[39],"data":[40,93],"and":[41,66,95],"can":[42,48,99],"deal":[43],"cyclical":[45],"structures":[46],"that":[47,81],"not":[49],"be":[50,101],"tackled":[51],"by":[52],"static":[53],"network.":[55],"We":[56],"applied":[57],"method":[60,84],"learning":[62],"metabolic":[68],"pathway":[69],"from":[70],"Saccharomyces":[71],"Cerevisiae":[72],"cell":[73],"cycle":[74],"expression":[76,92],"data.":[77],"The":[78],"results":[79],"show":[80],"proposed":[83],"capable":[86],"of":[87],"handling":[88],"missing":[89],"values":[90],"sets,":[94],"inference":[97],"accuracy":[98],"further":[100],"improved.":[102]},"counts_by_year":[{"year":2024,"cited_by_count":1},{"year":2019,"cited_by_count":1},{"year":2014,"cited_by_count":1},{"year":2012,"cited_by_count":2}],"updated_date":"2026-10-12T09:40:04.860316","created_date":"2016-06-24T00:00:00"}
