{"id":"https://openalex.org/W3209891925","doi":"https://doi.org/10.1007/s00253-021-11647-7","title":"Improved method for the extraction of high-quality DNA from lignocellulosic compost samples for metagenomic studies","display_name":"Improved method for the extraction of high-quality DNA from lignocellulosic compost samples for metagenomic studies","publication_year":2021,"publication_date":"2021-11-01","ids":{"openalex":"https://openalex.org/W3209891925","doi":"https://doi.org/10.1007/s00253-021-11647-7","mag":"3209891925","pmid":"https://pubmed.ncbi.nlm.nih.gov/34724083"},"language":"en","primary_location":{"id":"doi:10.1007/s00253-021-11647-7","doi":"https://doi.org/10.1007/s00253-021-11647-7","is_oa":false,"landing_page_url":"https://doi.org/10.1007/s00253-021-11647-7","pdf_url":null,"source":{"id":"https://openalex.org/S70979998","display_name":"Applied Microbiology and Biotechnology","issn_l":"0175-7598","issn":["0175-7598","1432-0614"],"is_oa":false,"is_in_doaj":true,"is_core":true,"listed_in":["cwts-core","doaj","dongbi-b","doyens","erih-plus","jufo-2","ki-jl-1","medline","norway-1","poland-100","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Applied Microbiology and Biotechnology","raw_type":"journal-article"},"volume":null,"type":"article","is_traditional":true,"indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://repositorium.uminho.pt/items/ce6d84e5-d02b-4f06-bde6-ba89b24af802/request-a-copy?bitstream=6cb8f11b-c2ce-4ff3-a2e4-dd29db989b19","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5028595418","display_name":"\u00c2ngela M. A. Costa","orcid":"https://orcid.org/0000-0001-9933-2176","observed_orcids":["https://orcid.org/0000-0001-9933-2176"]},"institutions":[{"id":"https://openalex.org/I99682543","display_name":"University of Minho","ror":"https://ror.org/037wpkx04","country_code":"PT","type":"education","lineage":["https://openalex.org/I99682543"]}],"countries":["PT"],"is_corresponding":false,"raw_author_name":"\u00c2ngela M. A. Costa","raw_affiliation_strings":["CEB - Centre of Biological Engineering, Universidade Do Minho, 4710-057, Braga, Portugal"],"raw_orcid":"https://orcid.org/0000-0001-9933-2176","affiliations":[{"raw_affiliation_string":"CEB - Centre of Biological Engineering, Universidade Do Minho, 4710-057, Braga, Portugal","institution_ids":["https://openalex.org/I99682543"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5044413640","display_name":"Andr\u00e9ia O. Santos","orcid":"https://orcid.org/0000-0003-3356-8420","observed_orcids":["https://orcid.org/0000-0003-3356-8420"]},"institutions":[{"id":"https://openalex.org/I99682543","display_name":"University of Minho","ror":"https://ror.org/037wpkx04","country_code":"PT","type":"education","lineage":["https://openalex.org/I99682543"]}],"countries":["PT"],"is_corresponding":false,"raw_author_name":"Andr\u00e9ia O. Santos","raw_affiliation_strings":["CEB - Centre of Biological Engineering, Universidade Do Minho, 4710-057, Braga, Portugal"],"raw_orcid":"https://orcid.org/0000-0003-3356-8420","affiliations":[{"raw_affiliation_string":"CEB - Centre of Biological Engineering, Universidade Do Minho, 4710-057, Braga, Portugal","institution_ids":["https://openalex.org/I99682543"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5049358420","display_name":"Joana Sousa","orcid":"https://orcid.org/0000-0002-9971-9140","observed_orcids":["https://orcid.org/0000-0002-9971-9140"]},"institutions":[{"id":"https://openalex.org/I99682543","display_name":"University of Minho","ror":"https://ror.org/037wpkx04","country_code":"PT","type":"education","lineage":["https://openalex.org/I99682543"]}],"countries":["PT"],"is_corresponding":false,"raw_author_name":"Joana Sousa","raw_affiliation_strings":["CEB - Centre of Biological Engineering, Universidade Do Minho, 4710-057, Braga, Portugal"],"raw_orcid":"https://orcid.org/0000-0002-9971-9140","affiliations":[{"raw_affiliation_string":"CEB - Centre of Biological Engineering, Universidade Do Minho, 4710-057, Braga, Portugal","institution_ids":["https://openalex.org/I99682543"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5010103352","display_name":"Joana L. Rodrigues","orcid":"https://orcid.org/0000-0002-3217-2320","observed_orcids":["https://orcid.org/0000-0002-3217-2320"]},"institutions":[{"id":"https://openalex.org/I99682543","display_name":"University of Minho","ror":"https://ror.org/037wpkx04","country_code":"PT","type":"education","lineage":["https://openalex.org/I99682543"]}],"countries":["PT"],"is_corresponding":false,"raw_author_name":"Joana L. Rodrigues","raw_affiliation_strings":["CEB - Centre of Biological Engineering, Universidade Do Minho, 4710-057, Braga, Portugal"],"raw_orcid":"https://orcid.org/0000-0002-3217-2320","affiliations":[{"raw_affiliation_string":"CEB - Centre of Biological Engineering, Universidade Do Minho, 4710-057, Braga, Portugal","institution_ids":["https://openalex.org/I99682543"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5011020739","display_name":"Eduardo J. Gudi\u00f1a","orcid":"https://orcid.org/0000-0002-3156-7363","observed_orcids":["https://orcid.org/0000-0002-3156-7363"]},"institutions":[{"id":"https://openalex.org/I99682543","display_name":"University of Minho","ror":"https://ror.org/037wpkx04","country_code":"PT","type":"education","lineage":["https://openalex.org/I99682543"]}],"countries":["PT"],"is_corresponding":false,"raw_author_name":"Eduardo J. Gudi\u00f1a","raw_affiliation_strings":["CEB - Centre of Biological Engineering, Universidade Do Minho, 4710-057, Braga, Portugal"],"raw_orcid":"https://orcid.org/0000-0002-3156-7363","affiliations":[{"raw_affiliation_string":"CEB - Centre of Biological Engineering, Universidade Do Minho, 4710-057, Braga, Portugal","institution_ids":["https://openalex.org/I99682543"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5005970703","display_name":"Sara C. Silv\u00e9rio","orcid":"https://orcid.org/0000-0003-3541-3908","observed_orcids":["https://orcid.org/0000-0003-3541-3908"]},"institutions":[{"id":"https://openalex.org/I99682543","display_name":"University of Minho","ror":"https://ror.org/037wpkx04","country_code":"PT","type":"education","lineage":["https://openalex.org/I99682543"]}],"countries":["PT"],"is_corresponding":true,"raw_author_name":"Sara C. Silv\u00e9rio","raw_affiliation_strings":["CEB - Centre of Biological Engineering, Universidade Do Minho, 4710-057, Braga, Portugal. sarasilverio@deb.uminho.pt","CEB - Centre of Biological Engineering, Universidade Do Minho, 4710-057, Braga, Portugal"],"raw_orcid":"https://orcid.org/0000-0003-3541-3908","affiliations":[{"raw_affiliation_string":"CEB - Centre of Biological Engineering, Universidade Do Minho, 4710-057, Braga, Portugal. sarasilverio@deb.uminho.pt","institution_ids":["https://openalex.org/I99682543"]},{"raw_affiliation_string":"CEB - Centre of Biological Engineering, Universidade Do Minho, 4710-057, Braga, Portugal","institution_ids":["https://openalex.org/I99682543"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5021667092","display_name":"L\u00edgia R. Rodrigues","orcid":"https://orcid.org/0000-0001-9265-0630","observed_orcids":["https://orcid.org/0000-0001-9265-0630"]},"institutions":[{"id":"https://openalex.org/I99682543","display_name":"University of Minho","ror":"https://ror.org/037wpkx04","country_code":"PT","type":"education","lineage":["https://openalex.org/I99682543"]}],"countries":["PT"],"is_corresponding":false,"raw_author_name":"Ligia R. Rodrigues","raw_affiliation_strings":["CEB - Centre of Biological Engineering, Universidade Do Minho, 4710-057, Braga, Portugal"],"raw_orcid":"https://orcid.org/0000-0001-9265-0630","affiliations":[{"raw_affiliation_string":"CEB - Centre of Biological Engineering, Universidade Do Minho, 4710-057, Braga, Portugal","institution_ids":["https://openalex.org/I99682543"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":["https://openalex.org/A5005970703"],"corresponding_institution_ids":["https://openalex.org/I99682543"],"apc_list":{"value":3860,"currency":"USD","value_usd":3860},"apc_paid":null,"fwci":2.0859,"has_fulltext":false,"cited_by_count":19,"citation_normalized_percentile":{"value":0.85128845,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":91,"max":98},"biblio":{"volume":"105","issue":"23","first_page":"8881","last_page":"8893"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11275","display_name":"Composting and Vermicomposting Techniques","score":0.49459999799728394,"subfield":{"id":"https://openalex.org/subfields/1111","display_name":"Soil Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11275","display_name":"Composting and Vermicomposting Techniques","score":0.49459999799728394,"subfield":{"id":"https://openalex.org/subfields/1111","display_name":"Soil Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.2264000028371811,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11617","display_name":"Enzyme Production and Characterization","score":0.04190000146627426,"subfield":{"id":"https://openalex.org/subfields/1305","display_name":"Biotechnology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/dna-extraction","display_name":"DNA extraction","score":0.8790000081062317},{"id":"https://openalex.org/keywords/humic-substances","display_name":"humic substances","score":0.9020000100135803},{"id":"https://openalex.org/keywords/metagenomics","display_name":"metagenomics","score":0.7689999938011169},{"id":"https://openalex.org/keywords/lignocellulose-degrading-enzymes","display_name":"lignocellulose-degrading enzymes","score":0.9520000219345093},{"id":"https://openalex.org/keywords/activated-carbon","display_name":"activated carbon","score":0.6740000247955322},{"id":"https://openalex.org/keywords/soil-dna","display_name":"soil DNA","score":0.39800000190734863},{"id":"https://openalex.org/keywords/lignocellulosic-biomass","display_name":"lignocellulosic biomass","score":0.7829999923706055},{"id":"https://openalex.org/keywords/metagenomic-library-construction","display_name":"metagenomic library construction","score":0.8100000023841858}],"concepts":[{"id":"https://openalex.org/C15151743","wikidata":"https://www.wikidata.org/wiki/Q903778","display_name":"Metagenomics","level":3,"score":0.9074786901473999},{"id":"https://openalex.org/C2780739461","wikidata":"https://www.wikidata.org/wiki/Q212254","display_name":"Compost","level":2,"score":0.7132824063301086},{"id":"https://openalex.org/C2778234585","wikidata":"https://www.wikidata.org/wiki/Q508355","display_name":"Lignocellulosic biomass","level":3,"score":0.6675702333450317},{"id":"https://openalex.org/C115540264","wikidata":"https://www.wikidata.org/wiki/Q2945560","display_name":"Biomass (ecology)","level":2,"score":0.5267761945724487},{"id":"https://openalex.org/C150903083","wikidata":"https://www.wikidata.org/wiki/Q7108","display_name":"Biotechnology","level":1,"score":0.4166214168071747},{"id":"https://openalex.org/C39432304","wikidata":"https://www.wikidata.org/wiki/Q188847","display_name":"Environmental science","level":0,"score":0.34473055601119995},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.3400841951370239},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.23152324557304382},{"id":"https://openalex.org/C53991642","wikidata":"https://www.wikidata.org/wiki/Q128991","display_name":"Biofuel","level":2,"score":0.13219428062438965},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.1071259081363678},{"id":"https://openalex.org/C6557445","wikidata":"https://www.wikidata.org/wiki/Q173113","display_name":"Agronomy","level":1,"score":0.0855928361415863},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0}],"mesh":[{"descriptor_ui":"D000076282","descriptor_name":"Composting","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D004247","descriptor_name":"DNA","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D006812","descriptor_name":"Humic Substances","qualifier_ui":"Q000032","qualifier_name":"analysis","is_major_topic":false},{"descriptor_ui":"D008031","descriptor_name":"Lignin","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012987","descriptor_name":"Soil","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D056186","descriptor_name":"Metagenomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":3,"locations":[{"id":"doi:10.1007/s00253-021-11647-7","doi":"https://doi.org/10.1007/s00253-021-11647-7","is_oa":false,"landing_page_url":"https://doi.org/10.1007/s00253-021-11647-7","pdf_url":null,"source":{"id":"https://openalex.org/S70979998","display_name":"Applied Microbiology and Biotechnology","issn_l":"0175-7598","issn":["0175-7598","1432-0614"],"is_oa":false,"is_in_doaj":true,"is_core":true,"listed_in":["cwts-core","doaj","dongbi-b","doyens","erih-plus","jufo-2","ki-jl-1","medline","norway-1","poland-100","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Applied Microbiology and Biotechnology","raw_type":"journal-article"},{"id":"pmid:34724083","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/34724083","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Applied microbiology and biotechnology","raw_type":"Journal Article"},{"id":"pmh:oai:repositorium.uminho.pt:1822/74703","doi":null,"is_oa":true,"landing_page_url":"https://repositorium.uminho.pt/items/ce6d84e5-d02b-4f06-bde6-ba89b24af802/request-a-copy?bitstream=6cb8f11b-c2ce-4ff3-a2e4-dd29db989b19","pdf_url":null,"source":{"id":"https://openalex.org/S4306402433","display_name":"Portuguese National Funding Agency for Science, Research and Technology (RCAAP Project by FCT)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"journal article"}],"best_oa_location":{"id":"pmh:oai:repositorium.uminho.pt:1822/74703","doi":null,"is_oa":true,"landing_page_url":"https://repositorium.uminho.pt/items/ce6d84e5-d02b-4f06-bde6-ba89b24af802/request-a-copy?bitstream=6cb8f11b-c2ce-4ff3-a2e4-dd29db989b19","pdf_url":null,"source":{"id":"https://openalex.org/S4306402433","display_name":"Portuguese National Funding Agency for Science, Research and Technology (RCAAP Project by FCT)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"journal article"},"sustainable_development_goals":[{"score":0.6000000238418579,"id":"https://metadata.un.org/sdg/12","display_name":"Responsible consumption and production"}],"study_designs":[],"awards":[{"id":"https://openalex.org/G1203399442","display_name":"Centro de Engenharia Biol\u00f3gica da Universidade do Minho","funder_award_id":"UIDB/04469/2020","funder_id":"https://openalex.org/F4320334779","funder_display_name":"Funda\u00e7\u00e3o para a Ci\u00eancia e a Tecnologia"},{"id":"https://openalex.org/G2310007084","display_name":null,"funder_award_id":"UMINHO/BPD/37/2018","funder_id":"https://openalex.org/F4320334779","funder_display_name":"Funda\u00e7\u00e3o para a Ci\u00eancia e a Tecnologia"},{"id":"https://openalex.org/G3739237695","display_name":null,"funder_award_id":"UMINHOBIM/2020/28","funder_id":"https://openalex.org/F4320334779","funder_display_name":"Funda\u00e7\u00e3o para a Ci\u00eancia e a Tecnologia"},{"id":"https://openalex.org/G3828655453","display_name":null,"funder_award_id":"POCI-01\u20130145-FEDER-029773","funder_id":"https://openalex.org/F4320334779","funder_display_name":"Funda\u00e7\u00e3o para a Ci\u00eancia e a Tecnologia"}],"funders":[{"id":"https://openalex.org/F4320334779","display_name":"Funda\u00e7\u00e3o para a Ci\u00eancia e a Tecnologia","ror":"https://ror.org/00snfqn58"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":59,"referenced_works":["https://openalex.org/W1002143146","https://openalex.org/W1410082964","https://openalex.org/W1530446793","https://openalex.org/W1836929782","https://openalex.org/W1843740908","https://openalex.org/W1883346160","https://openalex.org/W1967336371","https://openalex.org/W1968531460","https://openalex.org/W2006888517","https://openalex.org/W2007278880","https://openalex.org/W2013766937","https://openalex.org/W2020895895","https://openalex.org/W2021278578","https://openalex.org/W2023425648","https://openalex.org/W2040821747","https://openalex.org/W2045204781","https://openalex.org/W2052623329","https://openalex.org/W2053715917","https://openalex.org/W2073497355","https://openalex.org/W2086408159","https://openalex.org/W2087240947","https://openalex.org/W2096974369","https://openalex.org/W2102101454","https://openalex.org/W2106327051","https://openalex.org/W2124186156","https://openalex.org/W2142145570","https://openalex.org/W2145539051","https://openalex.org/W2153823136","https://openalex.org/W2156125289","https://openalex.org/W2157783441","https://openalex.org/W2159869703","https://openalex.org/W2161546116","https://openalex.org/W2254517477","https://openalex.org/W2283090627","https://openalex.org/W2296692739","https://openalex.org/W2527603032","https://openalex.org/W2556608672","https://openalex.org/W2567454503","https://openalex.org/W2588494416","https://openalex.org/W2594144676","https://openalex.org/W2733416560","https://openalex.org/W2746172948","https://openalex.org/W2748328505","https://openalex.org/W2751743037","https://openalex.org/W2762653773","https://openalex.org/W2781962458","https://openalex.org/W2782686024","https://openalex.org/W2805108819","https://openalex.org/W2885130397","https://openalex.org/W2897820297","https://openalex.org/W2953655267","https://openalex.org/W2979688568","https://openalex.org/W2984721399","https://openalex.org/W3030488933","https://openalex.org/W3044332703","https://openalex.org/W3127505609","https://openalex.org/W3156469652","https://openalex.org/W4238357155","https://openalex.org/W4285719527"],"related_works":["https://openalex.org/W3000777484","https://openalex.org/W2058579151","https://openalex.org/W2349426386","https://openalex.org/W2805108819","https://openalex.org/W2124186156","https://openalex.org/W2733416560","https://openalex.org/W7030074240","https://openalex.org/W7094441858","https://openalex.org/W2026249699","https://openalex.org/W2007278880"],"abstract_inverted_index":null,"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":2},{"year":2024,"cited_by_count":6},{"year":2023,"cited_by_count":7},{"year":2022,"cited_by_count":3}],"updated_date":"2026-11-13T13:42:25.865203","created_date":"2021-11-08T00:00:00"}
