{"id":"https://openalex.org/W3192836732","doi":"https://doi.org/10.3390/vaccines9080837","title":"Evolution and Epidemic Spread of SARS-CoV-2 in Colombia: A Year into the Pandemic","display_name":"Evolution and Epidemic Spread of SARS-CoV-2 in Colombia: A Year into the Pandemic","publication_year":2021,"publication_date":"2021-07-30","ids":{"openalex":"https://openalex.org/W3192836732","doi":"https://doi.org/10.3390/vaccines9080837","mag":"3192836732","pmid":"https://pubmed.ncbi.nlm.nih.gov/34451962","pmcid":"https://www.ncbi.nlm.nih.gov/pmc/articles/8402472"},"language":"en","primary_location":{"id":"doi:10.3390/vaccines9080837","doi":"https://doi.org/10.3390/vaccines9080837","is_oa":true,"landing_page_url":"https://doi.org/10.3390/vaccines9080837","pdf_url":"https://www.mdpi.com/2076-393X/9/8/837/pdf?version=1627633423","source":{"id":"https://openalex.org/S4210226234","display_name":"Vaccines","issn_l":"2076-393X","issn":["2076-393X"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["anvur-scientific","cwts-core","doaj","norway-1","poland-140","russia-white-list-2","vabb-shw"],"host_organization":"https://openalex.org/P4310310987","host_organization_name":"Multidisciplinary Digital Publishing Institute","host_organization_lineage":["https://openalex.org/P4310310987"],"host_organization_lineage_names":["Multidisciplinary Digital Publishing Institute"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Vaccines","raw_type":"journal-article"},"volume":null,"type":"article","is_traditional":true,"indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://www.mdpi.com/2076-393X/9/8/837/pdf?version=1627633423","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5089385997","display_name":"Sergio Casta\u00f1eda","orcid":"https://orcid.org/0000-0001-8720-9664","observed_orcids":["https://orcid.org/0000-0001-8720-9664"]},"institutions":[{"id":"https://openalex.org/I90803817","display_name":"Universidad del Rosario","ror":"https://ror.org/0108mwc04","country_code":"CO","type":"education","lineage":["https://openalex.org/I90803817"]}],"countries":["CO"],"is_corresponding":false,"raw_author_name":"Sergio Casta\u00f1eda","raw_affiliation_strings":["Centro de Investigaciones en Microbiolog\u00eda y Biotecnolog\u00eda-UR (CIMBIUR), Facultad de Ciencias Naturales, Universidad del Rosario, Bogot\u00e1 111221, Colombia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Centro de Investigaciones en Microbiolog\u00eda y Biotecnolog\u00eda-UR (CIMBIUR), Facultad de Ciencias Naturales, Universidad del Rosario, Bogot\u00e1 111221, Colombia","institution_ids":["https://openalex.org/I90803817"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5023897269","display_name":"Luz Helena Pati\u00f1o","orcid":"https://orcid.org/0000-0002-8667-8896","observed_orcids":["https://orcid.org/0000-0002-8667-8896"]},"institutions":[{"id":"https://openalex.org/I90803817","display_name":"Universidad del Rosario","ror":"https://ror.org/0108mwc04","country_code":"CO","type":"education","lineage":["https://openalex.org/I90803817"]}],"countries":["CO"],"is_corresponding":false,"raw_author_name":"Luz H. Pati\u00f1o","raw_affiliation_strings":["Centro de Investigaciones en Microbiolog\u00eda y Biotecnolog\u00eda-UR (CIMBIUR), Facultad de Ciencias Naturales, Universidad del Rosario, Bogot\u00e1 111221, Colombia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Centro de Investigaciones en Microbiolog\u00eda y Biotecnolog\u00eda-UR (CIMBIUR), Facultad de Ciencias Naturales, Universidad del Rosario, Bogot\u00e1 111221, Colombia","institution_ids":["https://openalex.org/I90803817"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5005129605","display_name":"Marina Mu\u00f1oz","orcid":"https://orcid.org/0000-0002-4216-6928","observed_orcids":["https://orcid.org/0000-0002-4216-6928"]},"institutions":[{"id":"https://openalex.org/I2802531901","display_name":"Millennium Science Initiative","ror":"https://ror.org/01c080z51","country_code":"CL","type":"government","lineage":["https://openalex.org/I2802531901"]},{"id":"https://openalex.org/I4405278216","display_name":"Agencia Nacional de Investigaci\u00f3n y Desarrollo","ror":"https://ror.org/05btm5233","country_code":"CL","type":"government","lineage":["https://openalex.org/I4387152581","https://openalex.org/I4405278216"]},{"id":"https://openalex.org/I90803817","display_name":"Universidad del Rosario","ror":"https://ror.org/0108mwc04","country_code":"CO","type":"education","lineage":["https://openalex.org/I90803817"]}],"countries":["CL","CO"],"is_corresponding":false,"raw_author_name":"Marina Mu\u00f1oz","raw_affiliation_strings":["ANID\u2014Millennium Science Initiative Program\u2014Millennium Nucleus in the Biology of the Intestinal Microbiota, Santiago 7510689, Chile","Centro de Investigaciones en Microbiolog\u00eda y Biotecnolog\u00eda-UR (CIMBIUR), Facultad de Ciencias Naturales, Universidad del Rosario, Bogot\u00e1 111221, Colombia"],"raw_orcid":"https://orcid.org/0000-0002-4216-6928","affiliations":[{"raw_affiliation_string":"ANID\u2014Millennium Science Initiative Program\u2014Millennium Nucleus in the Biology of the Intestinal Microbiota, Santiago 7510689, Chile","institution_ids":["https://openalex.org/I2802531901","https://openalex.org/I4405278216"]},{"raw_affiliation_string":"Centro de Investigaciones en Microbiolog\u00eda y Biotecnolog\u00eda-UR (CIMBIUR), Facultad de Ciencias Naturales, Universidad del Rosario, Bogot\u00e1 111221, Colombia","institution_ids":["https://openalex.org/I90803817"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5062566976","display_name":"Nathalia Ballesteros","orcid":"https://orcid.org/0000-0002-8388-0132","observed_orcids":["https://orcid.org/0000-0002-8388-0132"]},"institutions":[{"id":"https://openalex.org/I90803817","display_name":"Universidad del Rosario","ror":"https://ror.org/0108mwc04","country_code":"CO","type":"education","lineage":["https://openalex.org/I90803817"]}],"countries":["CO"],"is_corresponding":false,"raw_author_name":"Nathalia Ballesteros","raw_affiliation_strings":["Centro de Investigaciones en Microbiolog\u00eda y Biotecnolog\u00eda-UR (CIMBIUR), Facultad de Ciencias Naturales, Universidad del Rosario, Bogot\u00e1 111221, Colombia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Centro de Investigaciones en Microbiolog\u00eda y Biotecnolog\u00eda-UR (CIMBIUR), Facultad de Ciencias Naturales, Universidad del Rosario, Bogot\u00e1 111221, Colombia","institution_ids":["https://openalex.org/I90803817"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5081887000","display_name":"Enzo Guerrero-Araya","orcid":"https://orcid.org/0000-0003-2282-7722","observed_orcids":["https://orcid.org/0000-0003-2282-7722"]},"institutions":[{"id":"https://openalex.org/I13897259","display_name":"Universidad Andr\u00e9s Bello","ror":"https://ror.org/01qq57711","country_code":"CL","type":"education","lineage":["https://openalex.org/I13897259"]},{"id":"https://openalex.org/I2802531901","display_name":"Millennium Science Initiative","ror":"https://ror.org/01c080z51","country_code":"CL","type":"government","lineage":["https://openalex.org/I2802531901"]},{"id":"https://openalex.org/I4405278216","display_name":"Agencia Nacional de Investigaci\u00f3n y Desarrollo","ror":"https://ror.org/05btm5233","country_code":"CL","type":"government","lineage":["https://openalex.org/I4387152581","https://openalex.org/I4405278216"]}],"countries":["CL"],"is_corresponding":false,"raw_author_name":"Enzo Guerrero-Araya","raw_affiliation_strings":["ANID\u2014Millennium Science Initiative Program\u2014Millennium Nucleus in the Biology of the Intestinal Microbiota, Santiago 7510689, Chile","Microbiota-Host Interactions and Clostridia Research Group, Facultad de Ciencias de la Vida, Universidad Andr\u00e9s Bello, Santiago 7510689, Chile"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"ANID\u2014Millennium Science Initiative Program\u2014Millennium Nucleus in the Biology of the Intestinal Microbiota, Santiago 7510689, Chile","institution_ids":["https://openalex.org/I2802531901","https://openalex.org/I4405278216"]},{"raw_affiliation_string":"Microbiota-Host Interactions and Clostridia Research Group, Facultad de Ciencias de la Vida, Universidad Andr\u00e9s Bello, Santiago 7510689, Chile","institution_ids":["https://openalex.org/I13897259"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5007765666","display_name":"Daniel Paredes\u2010Sabja","orcid":"https://orcid.org/0000-0002-6176-9943","observed_orcids":["https://orcid.org/0000-0002-6176-9943"]},"institutions":[{"id":"https://openalex.org/I2802531901","display_name":"Millennium Science Initiative","ror":"https://ror.org/01c080z51","country_code":"CL","type":"government","lineage":["https://openalex.org/I2802531901"]},{"id":"https://openalex.org/I4405278216","display_name":"Agencia Nacional de Investigaci\u00f3n y Desarrollo","ror":"https://ror.org/05btm5233","country_code":"CL","type":"government","lineage":["https://openalex.org/I4387152581","https://openalex.org/I4405278216"]},{"id":"https://openalex.org/I91045830","display_name":"Texas A&M University","ror":"https://ror.org/01f5ytq51","country_code":"US","type":"education","lineage":["https://openalex.org/I91045830"]}],"countries":["CL","US"],"is_corresponding":false,"raw_author_name":"Daniel Paredes-Sabja","raw_affiliation_strings":["ANID\u2014Millennium Science Initiative Program\u2014Millennium Nucleus in the Biology of the Intestinal Microbiota, Santiago 7510689, Chile","Department of Biology, Texas A&M University, College Station, TX 77843, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"ANID\u2014Millennium Science Initiative Program\u2014Millennium Nucleus in the Biology of the Intestinal Microbiota, Santiago 7510689, Chile","institution_ids":["https://openalex.org/I2802531901","https://openalex.org/I4405278216"]},{"raw_affiliation_string":"Department of Biology, Texas A&M University, College Station, TX 77843, USA","institution_ids":["https://openalex.org/I91045830"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5111430369","display_name":"Carolina Fl\u00f3rez","orcid":"https://orcid.org/0000-0003-4223-2742","observed_orcids":["https://orcid.org/0000-0003-4223-2742"]},"institutions":[{"id":"https://openalex.org/I4210152059","display_name":"Instituto Nacional de Salud","ror":"https://ror.org/03yxg7206","country_code":"CO","type":"government","lineage":["https://openalex.org/I4210152059"]}],"countries":["CO"],"is_corresponding":false,"raw_author_name":"Carolina Fl\u00f3rez","raw_affiliation_strings":["Instituto Nacional de Salud, Bogot\u00e1 111321, Colombia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Instituto Nacional de Salud, Bogot\u00e1 111321, Colombia","institution_ids":["https://openalex.org/I4210152059"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5112554344","display_name":"Sergio Gomez","orcid":"https://orcid.org/0000-0002-1092-9118","observed_orcids":["https://orcid.org/0000-0002-1092-9118"]},"institutions":[{"id":"https://openalex.org/I4210152059","display_name":"Instituto Nacional de Salud","ror":"https://ror.org/03yxg7206","country_code":"CO","type":"government","lineage":["https://openalex.org/I4210152059"]}],"countries":["CO"],"is_corresponding":false,"raw_author_name":"Sergio Gomez","raw_affiliation_strings":["Instituto Nacional de Salud, Bogot\u00e1 111321, Colombia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Instituto Nacional de Salud, Bogot\u00e1 111321, Colombia","institution_ids":["https://openalex.org/I4210152059"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5027607560","display_name":"Carolina Ram\u00edrez-Santana","orcid":"https://orcid.org/0000-0003-2137-4899","observed_orcids":["https://orcid.org/0000-0003-2137-4899"]},"institutions":[{"id":"https://openalex.org/I90803817","display_name":"Universidad del Rosario","ror":"https://ror.org/0108mwc04","country_code":"CO","type":"education","lineage":["https://openalex.org/I90803817"]}],"countries":["CO"],"is_corresponding":false,"raw_author_name":"Carolina Ram\u00edrez-Santana","raw_affiliation_strings":["Centro de Estudio de Enfermedades Autoinmunes (CREA), Escuela de Medicina y Ciencias de la Salud, Universidad del Rosario, Bogot\u00e1 111221, Colombia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Centro de Estudio de Enfermedades Autoinmunes (CREA), Escuela de Medicina y Ciencias de la Salud, Universidad del Rosario, Bogot\u00e1 111221, Colombia","institution_ids":["https://openalex.org/I90803817"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5070766502","display_name":"Gustavo Salguero","orcid":"https://orcid.org/0000-0002-5018-9927","observed_orcids":["https://orcid.org/0000-0002-5018-9927"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Gustavo Salguero","raw_affiliation_strings":["Instituto Distrital de Ciencia, Biotecnolog\u00eda e Innovaci\u00f3n en Salud (IDCBIS), Bogot\u00e1 111611, Colombia"],"raw_orcid":"https://orcid.org/0000-0002-5018-9927","affiliations":[{"raw_affiliation_string":"Instituto Distrital de Ciencia, Biotecnolog\u00eda e Innovaci\u00f3n en Salud (IDCBIS), Bogot\u00e1 111611, Colombia","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5032256789","display_name":"Juan Esteban Gallo","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I4210128920","display_name":"Universidad CES","ror":"https://ror.org/037p13h95","country_code":"CO","type":"education","lineage":["https://openalex.org/I4210128920"]}],"countries":["CO"],"is_corresponding":false,"raw_author_name":"Juan E. Gallo","raw_affiliation_strings":["Genoma Ces Biotechnologies, Universidad CES, Medellin 050021, Colombia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Genoma Ces Biotechnologies, Universidad CES, Medellin 050021, Colombia","institution_ids":["https://openalex.org/I4210128920"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5009311148","display_name":"Alberto Paniz\u2010Mondolfi","orcid":"https://orcid.org/0000-0003-1259-1736","observed_orcids":["https://orcid.org/0000-0003-1259-1736"]},"institutions":[{"id":"https://openalex.org/I98704320","display_name":"Icahn School of Medicine at Mount Sinai","ror":"https://ror.org/04a9tmd77","country_code":"US","type":"education","lineage":["https://openalex.org/I1320796813","https://openalex.org/I98704320"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Alberto E. Paniz-Mondolfi","raw_affiliation_strings":["Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA"],"raw_orcid":"https://orcid.org/0000-0003-1259-1736","affiliations":[{"raw_affiliation_string":"Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA","institution_ids":["https://openalex.org/I98704320"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5002588069","display_name":"Juan David Ram\u00edrez","orcid":"https://orcid.org/0000-0002-1344-9312","observed_orcids":["https://orcid.org/0000-0002-1344-9312"]},"institutions":[{"id":"https://openalex.org/I90803817","display_name":"Universidad del Rosario","ror":"https://ror.org/0108mwc04","country_code":"CO","type":"education","lineage":["https://openalex.org/I90803817"]}],"countries":["CO"],"is_corresponding":true,"raw_author_name":"Juan David Ram\u00edrez","raw_affiliation_strings":["Centro de Investigaciones en Microbiolog\u00eda y Biotecnolog\u00eda-UR (CIMBIUR), Facultad de Ciencias Naturales, Universidad del Rosario, Bogot\u00e1 111221, Colombia"],"raw_orcid":"https://orcid.org/0000-0002-1344-9312","affiliations":[{"raw_affiliation_string":"Centro de Investigaciones en Microbiolog\u00eda y Biotecnolog\u00eda-UR (CIMBIUR), Facultad de Ciencias Naturales, Universidad del Rosario, Bogot\u00e1 111221, Colombia","institution_ids":["https://openalex.org/I90803817"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":8,"corresponding_author_ids":["https://openalex.org/A5002588069"],"corresponding_institution_ids":["https://openalex.org/I90803817"],"apc_list":{"value":2000,"currency":"CHF","value_usd":2160},"apc_paid":{"value":2000,"currency":"CHF","value_usd":2160},"fwci":1.2544,"has_fulltext":true,"cited_by_count":14,"citation_normalized_percentile":{"value":0.79218189,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":98},"biblio":{"volume":"9","issue":"8","first_page":"837","last_page":"837"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10410","display_name":"COVID-19 epidemiological studies","score":0.8070999979972839,"subfield":{"id":"https://openalex.org/subfields/2611","display_name":"Modeling and Simulation"},"field":{"id":"https://openalex.org/fields/26","display_name":"Mathematics"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10410","display_name":"COVID-19 epidemiological studies","score":0.8070999979972839,"subfield":{"id":"https://openalex.org/subfields/2611","display_name":"Modeling and Simulation"},"field":{"id":"https://openalex.org/fields/26","display_name":"Mathematics"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10118","display_name":"SARS-CoV-2 and COVID-19 Research","score":0.1858000010251999,"subfield":{"id":"https://openalex.org/subfields/2725","display_name":"Infectious Diseases"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T11581","display_name":"Viral Infections and Outbreaks Research","score":0.0006000000284984708,"subfield":{"id":"https://openalex.org/subfields/2725","display_name":"Infectious Diseases"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/sars-cov-2","display_name":"SARS-CoV-2","score":0.9980000257492065},{"id":"https://openalex.org/keywords/covid-19","display_name":"COVID-19 pandemic","score":0.8629999756813049},{"id":"https://openalex.org/keywords/epidemic-modeling","display_name":"epidemic modeling","score":0.5770000219345093},{"id":"https://openalex.org/keywords/transmission-dynamics","display_name":"transmission dynamics","score":0.7179999947547913},{"id":"https://openalex.org/keywords/basic-reproduction-number","display_name":"basic reproduction number","score":0.9070000052452087},{"id":"https://openalex.org/keywords/epidemic-forecasting","display_name":"epidemic forecasting","score":0.4740000069141388},{"id":"https://openalex.org/keywords/sars-cov-2-variants","display_name":"SARS-CoV-2 variants","score":0.7879999876022339},{"id":"https://openalex.org/keywords/phylogenetic-analysis","display_name":"phylogenetic analysis","score":0.8519999980926514},{"id":"https://openalex.org/keywords/colombia","display_name":"Colombia","score":0.375},{"id":"https://openalex.org/keywords/geographic-distribution-of-cases","display_name":"geographic distribution of cases","score":0.8069999814033508},{"id":"https://openalex.org/keywords/containment-strategy","display_name":"containment measures","score":0.6100000143051147}],"concepts":[{"id":"https://openalex.org/C89623803","wikidata":"https://www.wikidata.org/wiki/Q12184","display_name":"Pandemic","level":5,"score":0.8681833148002625},{"id":"https://openalex.org/C761482","wikidata":"https://www.wikidata.org/wiki/Q118093","display_name":"Transmission (telecommunications)","level":2,"score":0.6787735223770142},{"id":"https://openalex.org/C205649164","wikidata":"https://www.wikidata.org/wiki/Q1071","display_name":"Geography","level":0,"score":0.5638632774353027},{"id":"https://openalex.org/C61511704","wikidata":"https://www.wikidata.org/wiki/Q1671857","display_name":"Incidence (geometry)","level":2,"score":0.5207352638244629},{"id":"https://openalex.org/C107130276","wikidata":"https://www.wikidata.org/wiki/Q133805","display_name":"Epidemiology","level":2,"score":0.5104255080223083},{"id":"https://openalex.org/C149923435","wikidata":"https://www.wikidata.org/wiki/Q37732","display_name":"Demography","level":1,"score":0.48687830567359924},{"id":"https://openalex.org/C110121322","wikidata":"https://www.wikidata.org/wiki/Q865811","display_name":"Distribution (mathematics)","level":2,"score":0.4837817847728729},{"id":"https://openalex.org/C3008058167","wikidata":"https://www.wikidata.org/wiki/Q84263196","display_name":"Coronavirus disease 2019 (COVID-19)","level":4,"score":0.4679029881954193},{"id":"https://openalex.org/C3007834351","wikidata":"https://www.wikidata.org/wiki/Q82069695","display_name":"Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2)","level":5,"score":0.4520053267478943},{"id":"https://openalex.org/C138816342","wikidata":"https://www.wikidata.org/wiki/Q189603","display_name":"Public health","level":2,"score":0.44106635451316833},{"id":"https://openalex.org/C99454951","wikidata":"https://www.wikidata.org/wiki/Q932068","display_name":"Environmental health","level":1,"score":0.3986654579639435},{"id":"https://openalex.org/C45355965","wikidata":"https://www.wikidata.org/wiki/Q1643441","display_name":"Socioeconomics","level":1,"score":0.3345542252063751},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.2889753580093384},{"id":"https://openalex.org/C2779134260","wikidata":"https://www.wikidata.org/wiki/Q12136","display_name":"Disease","level":2,"score":0.27727094292640686},{"id":"https://openalex.org/C524204448","wikidata":"https://www.wikidata.org/wiki/Q788926","display_name":"Infectious disease (medical specialty)","level":3,"score":0.2638964354991913},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.08403339982032776},{"id":"https://openalex.org/C144024400","wikidata":"https://www.wikidata.org/wiki/Q21201","display_name":"Sociology","level":0,"score":0.0},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.0},{"id":"https://openalex.org/C126322002","wikidata":"https://www.wikidata.org/wiki/Q11180","display_name":"Internal medicine","level":1,"score":0.0},{"id":"https://openalex.org/C159110408","wikidata":"https://www.wikidata.org/wiki/Q121176","display_name":"Nursing","level":1,"score":0.0},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.0},{"id":"https://openalex.org/C120665830","wikidata":"https://www.wikidata.org/wiki/Q14620","display_name":"Optics","level":1,"score":0.0},{"id":"https://openalex.org/C76155785","wikidata":"https://www.wikidata.org/wiki/Q418","display_name":"Telecommunications","level":1,"score":0.0},{"id":"https://openalex.org/C134306372","wikidata":"https://www.wikidata.org/wiki/Q7754","display_name":"Mathematical analysis","level":1,"score":0.0}],"mesh":[],"locations_count":5,"locations":[{"id":"doi:10.3390/vaccines9080837","doi":"https://doi.org/10.3390/vaccines9080837","is_oa":true,"landing_page_url":"https://doi.org/10.3390/vaccines9080837","pdf_url":"https://www.mdpi.com/2076-393X/9/8/837/pdf?version=1627633423","source":{"id":"https://openalex.org/S4210226234","display_name":"Vaccines","issn_l":"2076-393X","issn":["2076-393X"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["anvur-scientific","cwts-core","doaj","norway-1","poland-140","russia-white-list-2","vabb-shw"],"host_organization":"https://openalex.org/P4310310987","host_organization_name":"Multidisciplinary Digital Publishing Institute","host_organization_lineage":["https://openalex.org/P4310310987"],"host_organization_lineage_names":["Multidisciplinary Digital Publishing Institute"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Vaccines","raw_type":"journal-article"},{"id":"pmid:34451962","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/34451962","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Vaccines","raw_type":"Journal Article"},{"id":"pmh:oai:pubmedcentral.nih.gov:8402472","doi":null,"is_oa":true,"landing_page_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC8402472/","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Vaccines (Basel)","raw_type":"Text"},{"id":"pmh:oai:repositorio.unab.cl:ria/65456","doi":null,"is_oa":true,"landing_page_url":"https://repositorio.unab.cl/handle/ria/65456","pdf_url":"https://repositorio.unab.cl/bitstreams/425800ae-ee02-418d-9040-7a87a8aff560/download","source":{"id":"https://openalex.org/S4306400858","display_name":"Repositorio Institucional Acad\u00e9mico , Sistema de Bibliotecas Universidad Andr\u00e9s Bello (UNAB) (Universidad Andr\u00e9s Bello (UNAB))","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I4210156962","host_organization_name":"Universidad Dr. Andr\u00e9s Bello","host_organization_lineage":["https://openalex.org/I4210156962"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Art\u00edculo"},{"id":"pmh:oai:doaj.org/article:21a80a7168c644edbefa9070493a219d","doi":null,"is_oa":true,"landing_page_url":"https://doaj.org/article/21a80a7168c644edbefa9070493a219d","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Vaccines, Vol 9, Iss 8, p 837 (2021)","raw_type":"article"}],"best_oa_location":{"id":"doi:10.3390/vaccines9080837","doi":"https://doi.org/10.3390/vaccines9080837","is_oa":true,"landing_page_url":"https://doi.org/10.3390/vaccines9080837","pdf_url":"https://www.mdpi.com/2076-393X/9/8/837/pdf?version=1627633423","source":{"id":"https://openalex.org/S4210226234","display_name":"Vaccines","issn_l":"2076-393X","issn":["2076-393X"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["anvur-scientific","cwts-core","doaj","norway-1","poland-140","russia-white-list-2","vabb-shw"],"host_organization":"https://openalex.org/P4310310987","host_organization_name":"Multidisciplinary Digital Publishing Institute","host_organization_lineage":["https://openalex.org/P4310310987"],"host_organization_lineage_names":["Multidisciplinary Digital Publishing Institute"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Vaccines","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.8199999928474426,"id":"https://metadata.un.org/sdg/3","display_name":"Good health and well-being"}],"study_designs":[],"awards":[{"id":"https://openalex.org/G105624849","display_name":null,"funder_award_id":"RUTA2025","funder_id":"https://openalex.org/F4320320064","funder_display_name":"Scottish Funding Council"},{"id":"https://openalex.org/G1079208094","display_name":"GCRF Vector-borne disease control in Venezuela Network","funder_award_id":"EP/T003782/1","funder_id":"https://openalex.org/F4320334627","funder_display_name":"Engineering and Physical Sciences Research Council"},{"id":"https://openalex.org/G3398345973","display_name":null,"funder_award_id":"EP/T003782/1","funder_id":"https://openalex.org/F4320320337","funder_display_name":"University of Glasgow"},{"id":"https://openalex.org/G4249107841","display_name":null,"funder_award_id":"EP/T003782/1","funder_id":"https://openalex.org/F4320325380","funder_display_name":"Universidad del Rosario"},{"id":"https://openalex.org/G4937886964","display_name":null,"funder_award_id":"RUTA2025","funder_id":"https://openalex.org/F4320325380","funder_display_name":"Universidad del Rosario"},{"id":"https://openalex.org/G6529808213","display_name":null,"funder_award_id":"RUTA2025","funder_id":"https://openalex.org/F4320320337","funder_display_name":"University of Glasgow"},{"id":"https://openalex.org/G8782284440","display_name":null,"funder_award_id":"EP/T003782/1","funder_id":"https://openalex.org/F4320320064","funder_display_name":"Scottish Funding Council"}],"funders":[{"id":"https://openalex.org/F4320320064","display_name":"Scottish Funding Council","ror":"https://ror.org/056bwcz71"},{"id":"https://openalex.org/F4320320337","display_name":"University of Glasgow","ror":"https://ror.org/00vtgdb53"},{"id":"https://openalex.org/F4320325380","display_name":"Universidad del Rosario","ror":"https://ror.org/0108mwc04"},{"id":"https://openalex.org/F4320331674","display_name":"Global Challenges Research Fund","ror":null},{"id":"https://openalex.org/F4320334627","display_name":"Engineering and Physical Sciences Research Council","ror":"https://ror.org/0439y7842"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W3192836732.pdf","grobid_xml":"https://content.openalex.org/works/W3192836732.grobid-xml"},"referenced_works_count":49,"referenced_works":["https://openalex.org/W2097446414","https://openalex.org/W2098466396","https://openalex.org/W2804572859","https://openalex.org/W2907804917","https://openalex.org/W2949848068","https://openalex.org/W2952045272","https://openalex.org/W2971072970","https://openalex.org/W3007546470","https://openalex.org/W3008294222","https://openalex.org/W3009155494","https://openalex.org/W3009983851","https://openalex.org/W3011660668","https://openalex.org/W3012798837","https://openalex.org/W3013862524","https://openalex.org/W3013967887","https://openalex.org/W3016858090","https://openalex.org/W3018922192","https://openalex.org/W3021112975","https://openalex.org/W3023063175","https://openalex.org/W3023904215","https://openalex.org/W3024297311","https://openalex.org/W3028626730","https://openalex.org/W3029703380","https://openalex.org/W3032971139","https://openalex.org/W3033511889","https://openalex.org/W3042091277","https://openalex.org/W3043586811","https://openalex.org/W3047115797","https://openalex.org/W3047688791","https://openalex.org/W3081238306","https://openalex.org/W3081491793","https://openalex.org/W3087208809","https://openalex.org/W3087637102","https://openalex.org/W3088789880","https://openalex.org/W3089170531","https://openalex.org/W3095998907","https://openalex.org/W3097670005","https://openalex.org/W3106927550","https://openalex.org/W3111355788","https://openalex.org/W3111564425","https://openalex.org/W3111820229","https://openalex.org/W3111883190","https://openalex.org/W3114087393","https://openalex.org/W3119298950","https://openalex.org/W3119957295","https://openalex.org/W3123978388","https://openalex.org/W3131280372","https://openalex.org/W3132468905","https://openalex.org/W4205225613"],"related_works":["https://openalex.org/W6920356553","https://openalex.org/W6957900241","https://openalex.org/W4220653700","https://openalex.org/W3154418617","https://openalex.org/W4214909547","https://openalex.org/W4414137523","https://openalex.org/W7119505196","https://openalex.org/W4410951897","https://openalex.org/W6976956123","https://openalex.org/W7154704269"],"abstract_inverted_index":{"Current":[0],"efforts":[1],"to":[2,20,35,56,68,121,174,241,246],"understand":[3,248],"the":[4,17,37,44,58,70,77,80,90,105,108,117,138,141,150,159,176,202,206,225,228,249,256],"epidemiology,":[5],"transmission":[6,60],"dynamics":[7,61,74],"and":[8,29,40,75,134,156,183,215,262,269],"emergence":[9,258],"of":[10,43,79,85,89,101,111,205,227,233,251,255,259],"novel":[11,260],"SARS-CoV-2":[12,59,192,252],"variants":[13,261],"worldwide":[14],"has":[15],"enabled":[16],"scientific":[18],"community":[19],"generate":[21],"critical":[22],"information":[23,223],"aimed":[24],"at":[25],"implementing":[26],"disease":[27],"surveillance":[28],"control":[30],"measures,":[31],"as":[32,34],"well":[33],"reduce":[36],"social,":[38],"economic":[39],"health":[41,170],"impact":[42],"pandemic.":[45,207],"Herein,":[46],"we":[47,165,239],"applied":[48],"an":[49],"epidemic":[50,65],"model":[51,66],"coupled":[52],"with":[53,140,162],"genomic":[54],"analysis":[55,88,188],"assess":[57],"in":[62,107,158,169,194,253],"Colombia.":[63],"This":[64],"allowed":[67,103],"identify":[69],"geographical":[71],"distribution,":[72],"Rt":[73,148],"predict":[76],"course":[78],"pandemic":[81,229],"considering":[82],"current":[83],"implementation":[84,232],"countermeasures.":[86],"The":[87,113,145,208],"incidence":[91,115,143],"rate":[92],"per":[93],"100,000":[94],"inhabitants":[95],"carried":[96],"out":[97],"across":[98],"different":[99],"regions":[100],"Colombia":[102,195],"visualizing":[104],"changes":[106],"geographic":[109],"distribution":[110],"cases.":[112],"cumulative":[114],"during":[116,149],"timeframe":[118],"March":[119,122],"2020":[120],"2021":[123],"revealed":[124,189],"that":[125],"Bogot\u00e1":[126],"(8063.0),":[127],"Quind\u00edo":[128],"(5482.71),":[129],"Amazonas":[130],"(5055.68),":[131],"Antioquia":[132],"(4922.35)":[133],"Tolima":[135],"(4724.41)":[136],"were":[137],"departments":[139],"highest":[142,146],"rate.":[144],"median":[147],"first":[151,203],"period":[152],"evaluated":[153],"was":[154],"2.13":[155],"1.09":[157],"second":[160],"period;":[161],"this":[163],"model,":[164],"identified":[166],"improving":[167],"opportunities":[168],"decision":[171],"making":[172],"related":[173],"controlling":[175],"pandemic,":[177],"diagnostic":[178],"testing":[179],"capacity,":[180],"case":[181],"registration":[182],"reporting,":[184],"among":[185],"others.":[186],"Genomic":[187],"52":[190],"circulating":[191],"lineages":[193],"detected":[196],"from":[197],"774":[198],"genomes":[199,209],"sequenced":[200],"throughout":[201],"year":[204],"grouped":[210],"into":[211],"four":[212],"main":[213],"clusters":[214],"exhibited":[216],"19":[217],"polymorphisms.":[218],"Our":[219],"results":[220],"provide":[221,242],"essential":[222],"on":[224],"spread":[226],"countrywide":[230],"despite":[231],"early":[234],"containment":[235],"measures.":[236],"In":[237],"addition,":[238],"aim":[240],"deeper":[243],"phylogenetic":[244],"insights":[245],"better":[247],"evolution":[250],"light":[254],"latent":[257],"how":[263],"these":[264],"may":[265],"potentially":[266],"influence":[267],"transmissibility":[268],"infectivity.":[270]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":2},{"year":2023,"cited_by_count":5},{"year":2022,"cited_by_count":6}],"updated_date":"2026-11-10T11:39:43.021295","created_date":"2021-08-16T00:00:00"}