{"id":"https://openalex.org/W3134934265","doi":"https://doi.org/10.1038/s41598-021-91757-4","title":"Nationwide surveillance of antimicrobial susceptibility of 509 rapidly growing mycobacteria strains isolated from clinical specimens in Japan","display_name":"Nationwide surveillance of antimicrobial susceptibility of 509 rapidly growing mycobacteria strains isolated from clinical specimens in Japan","publication_year":2021,"publication_date":"2021-06-09","ids":{"openalex":"https://openalex.org/W3134934265","doi":"https://doi.org/10.1038/s41598-021-91757-4","mag":"3134934265","pmid":"https://pubmed.ncbi.nlm.nih.gov/34108590","pmcid":"https://www.ncbi.nlm.nih.gov/pmc/articles/8190260"},"language":"en","primary_location":{"id":"doi:10.1038/s41598-021-91757-4","doi":"https://doi.org/10.1038/s41598-021-91757-4","is_oa":true,"landing_page_url":"https://doi.org/10.1038/s41598-021-91757-4","pdf_url":"https://www.nature.com/articles/s41598-021-91757-4.pdf","source":{"id":"https://openalex.org/S196734849","display_name":"Scientific Reports","issn_l":"2045-2322","issn":["2045-2322"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["anvur-class-a","anvur-scientific","cwts-core","doaj","dongbi-c","doyens","jufo-1","ki-jl-1","medline","norway-1","poland-140","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310319908","host_organization_name":"Nature Portfolio","host_organization_lineage":["https://openalex.org/P4310319908","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Nature Portfolio","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Scientific Reports","raw_type":"journal-article"},"volume":null,"type":"article","is_traditional":true,"indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://www.nature.com/articles/s41598-021-91757-4.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5000676978","display_name":"Keisuke Kamada","orcid":"https://orcid.org/0009-0008-5070-4272","observed_orcids":["https://orcid.org/0009-0008-5070-4272","https://orcid.org/0000-0001-7034-4376"]},"institutions":[{"id":"https://openalex.org/I205349734","display_name":"Hokkaido University","ror":"https://ror.org/02e16g702","country_code":"JP","type":"education","lineage":["https://openalex.org/I205349734"]},{"id":"https://openalex.org/I4210100133","display_name":"Japan Anti Tuberculosis Association","ror":"https://ror.org/012daep68","country_code":"JP","type":"other","lineage":["https://openalex.org/I4210100133"]},{"id":"https://openalex.org/I4210136522","display_name":"Tokyo Women's Medical University","ror":"https://ror.org/03kjjhe36","country_code":"JP","type":"education","lineage":["https://openalex.org/I4210136522"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Keisuke Kamada","raw_affiliation_strings":["Department of Infectious Diseases, Tokyo Women's Medical University, 8-1 Kawada-Cho, Shinjuku-ku, Tokyo, 162-8666, Japan","Department of Mycobacterium Reference and Research, The Research Institute of Tuberculosis, Japan Anti-Tuberculosis Association, Tokyo, 204-0022, Japan","Department of Respiratory Medicine, Faculty of Medicine and Graduate School of Medicine, Hokkaido University, Kita 14-jo Nishi 5-chome, Kita-ku, Sapporo-shi, Hokkaido, 001-0014, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Infectious Diseases, Tokyo Women's Medical University, 8-1 Kawada-Cho, Shinjuku-ku, Tokyo, 162-8666, Japan","institution_ids":["https://openalex.org/I4210136522"]},{"raw_affiliation_string":"Department of Mycobacterium Reference and Research, The Research Institute of Tuberculosis, Japan Anti-Tuberculosis Association, Tokyo, 204-0022, Japan","institution_ids":["https://openalex.org/I4210100133"]},{"raw_affiliation_string":"Department of Respiratory Medicine, Faculty of Medicine and Graduate School of Medicine, Hokkaido University, Kita 14-jo Nishi 5-chome, Kita-ku, Sapporo-shi, Hokkaido, 001-0014, Japan","institution_ids":["https://openalex.org/I205349734"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Atsushi Yoshida","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I4210136522","display_name":"Tokyo Women's Medical University","ror":"https://ror.org/03kjjhe36","country_code":"JP","type":"education","lineage":["https://openalex.org/I4210136522"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Atsushi Yoshida","raw_affiliation_strings":["Department of Infectious Diseases, Tokyo Women's Medical University, 8-1 Kawada-Cho, Shinjuku-ku, Tokyo, 162-8666, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Infectious Diseases, Tokyo Women's Medical University, 8-1 Kawada-Cho, Shinjuku-ku, Tokyo, 162-8666, Japan","institution_ids":["https://openalex.org/I4210136522"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5076252231","display_name":"Shigekazu Iguchi","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I4210136522","display_name":"Tokyo Women's Medical University","ror":"https://ror.org/03kjjhe36","country_code":"JP","type":"education","lineage":["https://openalex.org/I4210136522"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Shigekazu Iguchi","raw_affiliation_strings":["Department of Infectious Diseases, Tokyo Women's Medical University, 8-1 Kawada-Cho, Shinjuku-ku, Tokyo, 162-8666, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Infectious Diseases, Tokyo Women's Medical University, 8-1 Kawada-Cho, Shinjuku-ku, Tokyo, 162-8666, Japan","institution_ids":["https://openalex.org/I4210136522"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5113555336","display_name":"Yuko O. Arai","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I4210136522","display_name":"Tokyo Women's Medical University","ror":"https://ror.org/03kjjhe36","country_code":"JP","type":"education","lineage":["https://openalex.org/I4210136522"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Yuko Arai","raw_affiliation_strings":["Department of Infectious Diseases, Tokyo Women's Medical University, 8-1 Kawada-Cho, Shinjuku-ku, Tokyo, 162-8666, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Infectious Diseases, Tokyo Women's Medical University, 8-1 Kawada-Cho, Shinjuku-ku, Tokyo, 162-8666, Japan","institution_ids":["https://openalex.org/I4210136522"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5036547977","display_name":"Yutaka Uzawa","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I4210136522","display_name":"Tokyo Women's Medical University","ror":"https://ror.org/03kjjhe36","country_code":"JP","type":"education","lineage":["https://openalex.org/I4210136522"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Yutaka Uzawa","raw_affiliation_strings":["Department of Infectious Diseases, Tokyo Women's Medical University, 8-1 Kawada-Cho, Shinjuku-ku, Tokyo, 162-8666, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Infectious Diseases, Tokyo Women's Medical University, 8-1 Kawada-Cho, Shinjuku-ku, Tokyo, 162-8666, Japan","institution_ids":["https://openalex.org/I4210136522"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5025695892","display_name":"Satoshi Konno","orcid":"https://orcid.org/0000-0001-6439-2443","observed_orcids":["https://orcid.org/0000-0001-6439-2443"]},"institutions":[{"id":"https://openalex.org/I205349734","display_name":"Hokkaido University","ror":"https://ror.org/02e16g702","country_code":"JP","type":"education","lineage":["https://openalex.org/I205349734"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Satoshi Konno","raw_affiliation_strings":["Department of Respiratory Medicine, Faculty of Medicine and Graduate School of Medicine, Hokkaido University, Kita 14-jo Nishi 5-chome, Kita-ku, Sapporo-shi, Hokkaido, 001-0014, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Respiratory Medicine, Faculty of Medicine and Graduate School of Medicine, Hokkaido University, Kita 14-jo Nishi 5-chome, Kita-ku, Sapporo-shi, Hokkaido, 001-0014, Japan","institution_ids":["https://openalex.org/I205349734"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5111411591","display_name":"Masahiro Shimojima","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I4210136772","display_name":"BML (Japan)","ror":"https://ror.org/04vr3cf25","country_code":"JP","type":"company","lineage":["https://openalex.org/I4210136772"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Masahiro Shimojima","raw_affiliation_strings":["BML, Inc, Matoba 1361-1, Kawagoe-shi, Saitama, 350-1101, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"BML, Inc, Matoba 1361-1, Kawagoe-shi, Saitama, 350-1101, Japan","institution_ids":["https://openalex.org/I4210136772"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5086996514","display_name":"Ken Kikuchi","orcid":"https://orcid.org/0000-0002-3165-8206","observed_orcids":["https://orcid.org/0000-0002-3165-8206"]},"institutions":[{"id":"https://openalex.org/I4210136522","display_name":"Tokyo Women's Medical University","ror":"https://ror.org/03kjjhe36","country_code":"JP","type":"education","lineage":["https://openalex.org/I4210136522"]}],"countries":["JP"],"is_corresponding":true,"raw_author_name":"Ken Kikuchi","raw_affiliation_strings":["Department of Infectious Diseases, Tokyo Women's Medical University, 8-1 Kawada-Cho, Shinjuku-ku, Tokyo, 162-8666, Japan. kikuchi.ken@twmu.ac.jp","Department of Infectious Diseases, Tokyo Women's Medical University, 8-1 Kawada-Cho, Shinjuku-ku, Tokyo, 162-8666, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Infectious Diseases, Tokyo Women's Medical University, 8-1 Kawada-Cho, Shinjuku-ku, Tokyo, 162-8666, Japan. kikuchi.ken@twmu.ac.jp","institution_ids":["https://openalex.org/I4210136522"]},{"raw_affiliation_string":"Department of Infectious Diseases, Tokyo Women's Medical University, 8-1 Kawada-Cho, Shinjuku-ku, Tokyo, 162-8666, Japan","institution_ids":["https://openalex.org/I4210136522"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5086996514"],"corresponding_institution_ids":["https://openalex.org/I4210136522"],"apc_list":{"value":1990,"currency":"USD","value_usd":1990},"apc_paid":{"value":1990,"currency":"USD","value_usd":1990},"fwci":4.7368,"has_fulltext":true,"cited_by_count":40,"citation_normalized_percentile":{"value":0.96104961,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":95,"max":99},"biblio":{"volume":"11","issue":"1","first_page":"12208","last_page":"12208"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11316","display_name":"Mycobacterium research and diagnosis","score":0.989300012588501,"subfield":{"id":"https://openalex.org/subfields/2713","display_name":"Epidemiology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T11316","display_name":"Mycobacterium research and diagnosis","score":0.989300012588501,"subfield":{"id":"https://openalex.org/subfields/2713","display_name":"Epidemiology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T12824","display_name":"Infections and bacterial resistance","score":0.007199999876320362,"subfield":{"id":"https://openalex.org/subfields/2726","display_name":"Microbiology (medical)"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10038","display_name":"Tuberculosis Research and Epidemiology","score":0.0005000000237487257,"subfield":{"id":"https://openalex.org/subfields/2725","display_name":"Infectious Diseases"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/rapidly-growing-mycobacteria","display_name":"rapidly growing mycobacteria","score":0.9990000128746033},{"id":"https://openalex.org/keywords/antimicrobial-susceptibility","display_name":"antimicrobial susceptibility","score":0.9919999837875366},{"id":"https://openalex.org/keywords/minimum-inhibitory-concentration","display_name":"minimum inhibitory concentration","score":0.8550000190734863},{"id":"https://openalex.org/keywords/antibiotic-resistance-mechanisms","display_name":"antibiotic resistance mechanisms","score":0.8109999895095825},{"id":"https://openalex.org/keywords/mycobacterium-abscessus","display_name":"Mycobacterium abscessus","score":0.8999999761581421},{"id":"https://openalex.org/keywords/rifabutin","display_name":"rifabutin","score":0.7509999871253967},{"id":"https://openalex.org/keywords/arbekacin","display_name":"arbekacin","score":0.9860000014305115},{"id":"https://openalex.org/keywords/sitafloxacin","display_name":"sitafloxacin","score":0.9990000128746033},{"id":"https://openalex.org/keywords/linezolid","display_name":"linezolid","score":0.8690000176429749},{"id":"https://openalex.org/keywords/amikacin","display_name":"amikacin","score":0.968999981880188},{"id":"https://openalex.org/keywords/gyra","display_name":"gyrA","score":0.5830000042915344},{"id":"https://openalex.org/keywords/gyrb","display_name":"gyrB","score":0.9520000219345093},{"id":"https://openalex.org/keywords/rpob-gene","display_name":"rpoB","score":0.8379999995231628},{"id":"https://openalex.org/keywords/hsp65","display_name":"hsp65","score":0.8370000123977661},{"id":"https://openalex.org/keywords/soft-drinks","display_name":"soft drinks","score":0.9700000286102295},{"id":"https://openalex.org/keywords/clinical-isolates","display_name":"clinical isolates","score":0.6639999747276306},{"id":"https://openalex.org/keywords/japan","display_name":"Japan","score":0.7580000162124634}],"concepts":[{"id":"https://openalex.org/C2780867798","wikidata":"https://www.wikidata.org/wiki/Q1135705","display_name":"Rifabutin","level":4,"score":0.9252690672874451},{"id":"https://openalex.org/C2778340795","wikidata":"https://www.wikidata.org/wiki/Q24782946","display_name":"rpoB","level":4,"score":0.7709039449691772},{"id":"https://openalex.org/C2776111603","wikidata":"https://www.wikidata.org/wiki/Q6946978","display_name":"Mycobacterium abscessus","level":4,"score":0.7408533096313477},{"id":"https://openalex.org/C89423630","wikidata":"https://www.wikidata.org/wiki/Q7193","display_name":"Microbiology","level":1,"score":0.7172452211380005},{"id":"https://openalex.org/C2777427914","wikidata":"https://www.wikidata.org/wiki/Q408529","display_name":"Amikacin","level":3,"score":0.6413490772247314},{"id":"https://openalex.org/C4937899","wikidata":"https://www.wikidata.org/wiki/Q68541106","display_name":"Antimicrobial","level":2,"score":0.6201863288879395},{"id":"https://openalex.org/C2781414143","wikidata":"https://www.wikidata.org/wiki/Q411377","display_name":"Linezolid","level":5,"score":0.5009469985961914},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.4508228302001953},{"id":"https://openalex.org/C501593827","wikidata":"https://www.wikidata.org/wiki/Q12187","display_name":"Antibiotics","level":2,"score":0.43803712725639343},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.35249125957489014},{"id":"https://openalex.org/C2780374374","wikidata":"https://www.wikidata.org/wiki/Q194309","display_name":"Mycobacterium","level":3,"score":0.33697381615638733},{"id":"https://openalex.org/C2776962512","wikidata":"https://www.wikidata.org/wiki/Q118551","display_name":"Clarithromycin","level":3,"score":0.14648860692977905},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.11881163716316223},{"id":"https://openalex.org/C523546767","wikidata":"https://www.wikidata.org/wiki/Q10876","display_name":"Bacteria","level":2,"score":0.1160842776298523},{"id":"https://openalex.org/C2778980435","wikidata":"https://www.wikidata.org/wiki/Q424027","display_name":"Vancomycin","level":4,"score":0.0},{"id":"https://openalex.org/C2779489039","wikidata":"https://www.wikidata.org/wiki/Q188121","display_name":"Staphylococcus aureus","level":3,"score":0.0},{"id":"https://openalex.org/C42062724","wikidata":"https://www.wikidata.org/wiki/Q1209205","display_name":"16S ribosomal RNA","level":3,"score":0.0}],"mesh":[{"descriptor_ui":"D000069349","descriptor_name":"Linezolid","qualifier_ui":"Q000494","qualifier_name":"pharmacology","is_major_topic":true},{"descriptor_ui":"D000583","descriptor_name":"Amikacin","qualifier_ui":"Q000494","qualifier_name":"pharmacology","is_major_topic":true},{"descriptor_ui":"D000900","descriptor_name":"Anti-Bacterial Agents","qualifier_ui":"Q000494","qualifier_name":"pharmacology","is_major_topic":true},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007564","descriptor_name":"Japan","qualifier_ui":"Q000453","qualifier_name":"epidemiology","is_major_topic":false},{"descriptor_ui":"D008826","descriptor_name":"Microbial Sensitivity Tests","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009165","descriptor_name":"Mycobacterium Infections, Nontuberculous","qualifier_ui":"Q000188","qualifier_name":"drug therapy","is_major_topic":true},{"descriptor_ui":"D009165","descriptor_name":"Mycobacterium Infections, Nontuberculous","qualifier_ui":"Q000382","qualifier_name":"microbiology","is_major_topic":false},{"descriptor_ui":"D009165","descriptor_name":"Mycobacterium Infections, Nontuberculous","qualifier_ui":"Q000453","qualifier_name":"epidemiology","is_major_topic":false},{"descriptor_ui":"D009170","descriptor_name":"Nontuberculous Mycobacteria","qualifier_ui":"Q000187","qualifier_name":"drug effects","is_major_topic":true},{"descriptor_ui":"D009170","descriptor_name":"Nontuberculous Mycobacteria","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D009170","descriptor_name":"Nontuberculous Mycobacteria","qualifier_ui":"Q000254","qualifier_name":"growth & development","is_major_topic":false},{"descriptor_ui":"D009170","descriptor_name":"Nontuberculous Mycobacteria","qualifier_ui":"Q000302","qualifier_name":"isolation & purification","is_major_topic":false},{"descriptor_ui":"D017291","descriptor_name":"Clarithromycin","qualifier_ui":"Q000494","qualifier_name":"pharmacology","is_major_topic":true},{"descriptor_ui":"D024881","descriptor_name":"Drug Resistance, Bacterial","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":5,"locations":[{"id":"doi:10.1038/s41598-021-91757-4","doi":"https://doi.org/10.1038/s41598-021-91757-4","is_oa":true,"landing_page_url":"https://doi.org/10.1038/s41598-021-91757-4","pdf_url":"https://www.nature.com/articles/s41598-021-91757-4.pdf","source":{"id":"https://openalex.org/S196734849","display_name":"Scientific Reports","issn_l":"2045-2322","issn":["2045-2322"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["anvur-class-a","anvur-scientific","cwts-core","doaj","dongbi-c","doyens","jufo-1","ki-jl-1","medline","norway-1","poland-140","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310319908","host_organization_name":"Nature Portfolio","host_organization_lineage":["https://openalex.org/P4310319908","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Nature Portfolio","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Scientific Reports","raw_type":"journal-article"},{"id":"doi:10.21203/rs.3.rs-269825/v1","doi":"https://doi.org/10.21203/rs.3.rs-269825/v1","is_oa":true,"landing_page_url":"https://doi.org/10.21203/rs.3.rs-269825/v1","pdf_url":"https://www.researchsquare.com/article/rs-269825/v1.pdf?c=1631892404000","source":{"id":"https://openalex.org/S4306525896","display_name":"Research Square","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"acceptedVersion","is_accepted":true,"is_published":false,"raw_source_name":"Research Square","raw_type":"posted-content"},{"id":"pmh:oai:pubmedcentral.nih.gov:8190260","doi":null,"is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/8190260","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Sci Rep","raw_type":"Text"},{"id":"pmid:34108590","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/34108590","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Scientific reports","raw_type":"Journal Article"},{"id":"pmh:oai:doaj.org/article:f2798552d0504ffe96352aec50a91f77","doi":null,"is_oa":true,"landing_page_url":"https://doaj.org/article/f2798552d0504ffe96352aec50a91f77","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Scientific Reports, Vol 11, Iss 1, Pp 1-10 (2021)","raw_type":"article"}],"best_oa_location":{"id":"doi:10.1038/s41598-021-91757-4","doi":"https://doi.org/10.1038/s41598-021-91757-4","is_oa":true,"landing_page_url":"https://doi.org/10.1038/s41598-021-91757-4","pdf_url":"https://www.nature.com/articles/s41598-021-91757-4.pdf","source":{"id":"https://openalex.org/S196734849","display_name":"Scientific Reports","issn_l":"2045-2322","issn":["2045-2322"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["anvur-class-a","anvur-scientific","cwts-core","doaj","dongbi-c","doyens","jufo-1","ki-jl-1","medline","norway-1","poland-140","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310319908","host_organization_name":"Nature Portfolio","host_organization_lineage":["https://openalex.org/P4310319908","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Nature Portfolio","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Scientific Reports","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.9391000270843506,"id":"https://metadata.un.org/sdg/3","display_name":"Good health and well-being"}],"study_designs":[],"awards":[{"id":"https://openalex.org/G1210563566","display_name":"Study on the efficacy of Rifabutin for M. abscessus group","funder_award_id":"20K22755","funder_id":"https://openalex.org/F4320334764","funder_display_name":"Japan Society for the Promotion of Science"},{"id":"https://openalex.org/G3919630775","display_name":"Analysis of mycobacterial non-coding RNA promotes the fundamental understanding for newly developing antimycobacterial therapies and strategies.","funder_award_id":"19K08938","funder_id":"https://openalex.org/F4320334764","funder_display_name":"Japan Society for the Promotion of Science"}],"funders":[{"id":"https://openalex.org/F4320334764","display_name":"Japan Society for the Promotion of Science","ror":"https://ror.org/00hhkn466"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W3134934265.pdf","grobid_xml":"https://content.openalex.org/works/W3134934265.grobid-xml"},"referenced_works_count":35,"referenced_works":["https://openalex.org/W1556539514","https://openalex.org/W1650522725","https://openalex.org/W1811040502","https://openalex.org/W1821277652","https://openalex.org/W1835131265","https://openalex.org/W1997183233","https://openalex.org/W2051753459","https://openalex.org/W2094059620","https://openalex.org/W2096830865","https://openalex.org/W2110215664","https://openalex.org/W2113926700","https://openalex.org/W2124204631","https://openalex.org/W2127897988","https://openalex.org/W2143497620","https://openalex.org/W2145922409","https://openalex.org/W2154928212","https://openalex.org/W2155048004","https://openalex.org/W2158907731","https://openalex.org/W2162625328","https://openalex.org/W2304970015","https://openalex.org/W2338750746","https://openalex.org/W2345743845","https://openalex.org/W2539948897","https://openalex.org/W2591969358","https://openalex.org/W2605511018","https://openalex.org/W2621324989","https://openalex.org/W2726072271","https://openalex.org/W2743041357","https://openalex.org/W2748145826","https://openalex.org/W2789338299","https://openalex.org/W2901972975","https://openalex.org/W2921372111","https://openalex.org/W2951774242","https://openalex.org/W2980659148","https://openalex.org/W7002273898"],"related_works":["https://openalex.org/W2591969358","https://openalex.org/W4291744065","https://openalex.org/W1650522725","https://openalex.org/W2901972975","https://openalex.org/W1990159751","https://openalex.org/W4311512498","https://openalex.org/W2126328800","https://openalex.org/W4293207225","https://openalex.org/W1823706666","https://openalex.org/W7155086152"],"abstract_inverted_index":{"This":[0],"study":[1,171],"aimed":[2],"to":[3,53,99],"identify":[4,74],"effective":[5],"treatments":[6],"against":[7],"rapidly":[8],"growing":[9],"mycobacteria":[10],"(RGM)":[11],"infections":[12],"by":[13,38],"investigating":[14],"the":[15,40,85,110,114,173],"minimum":[16],"inhibitory":[17],"concentrations":[18],"(MIC)":[19],"of":[20,28,42,64,87,95,117,121,141,156,177],"24":[21,54],"antimicrobial":[22,55,65,174],"agents":[23,56],"and":[24,48,50,71,83,101,107,184,189],"their":[25,51],"molecular":[26],"mechanisms":[27],"resistance.":[29],"In":[30,168],"total,":[31],"509":[32],"clinical":[33],"RGM":[34,92,179,197],"isolates":[35,143],"were":[36,57,97],"identified":[37,90],"analyzing":[39],"sequences":[41],"three":[43],"housekeeping":[44],"genes":[45,67],"(hsp65,":[46],"rpoB,":[47],"sodA),":[49],"susceptibilities":[52],"tested.":[58],"We":[59,89],"also":[60],"performed":[61,80],"sequencing":[62],"analysis":[63],"resistance":[66],"(rrl,":[68],"rrs,":[69],"gyrA,":[70],"gyrB).":[72],"To":[73],"Mycobacteroides":[75],"abscessus":[76,125,127,135],"group":[77],"subspecies,":[78],"we":[79],"PCR-based":[81],"typing":[82],"determined":[84],"sequevar":[86],"erm(41).":[88],"15":[91,178],"species,":[93,105],"most":[94],"which":[96],"susceptible":[98],"amikacin":[100],"linezolid.":[102],"Among":[103],"these":[104],"arbekacin":[106],"sitafloxacin":[108],"had":[109],"lowest":[111],"MIC":[112,120,145],"among":[113],"same":[115],"class":[116],"antimicrobials.":[118],"The":[119,139],"rifabutin":[122,150,190],"for":[123,133,149,196],"M.":[124,134],"subsp.":[126,136],"(MAB)":[128],"was":[129,151],"lower":[130],"than":[131,154],"that":[132,155,186],"massiliense":[137],"(MMA).":[138],"proportion":[140],"MAB":[142],"with":[144],"\u2264":[146],"2":[147],"mg/L":[148],"significantly":[152],"higher":[153],"MMA":[157],"[MAB:":[158],"50/178":[159],"(28.1%)":[160],"vs.":[161],"MMA:":[162],"23/130":[163],"(17.7%);":[164],"p":[165],"=":[166],"0.041].":[167],"summary,":[169],"our":[170],"revealed":[172],"susceptibility":[175],"profile":[176],"species":[180],"isolated":[181],"in":[182],"Japan":[183],"indicated":[185],"arbekacin,":[187],"sitafloxacin,":[188],"may":[191],"be":[192],"possible":[193],"therapeutic":[194],"options":[195],"infections.":[198]},"counts_by_year":[{"year":2026,"cited_by_count":6},{"year":2025,"cited_by_count":8},{"year":2024,"cited_by_count":6},{"year":2023,"cited_by_count":13},{"year":2022,"cited_by_count":3},{"year":2021,"cited_by_count":4}],"updated_date":"2026-11-05T12:25:35.769452","created_date":"2021-03-15T00:00:00"}
