{"id":"https://openalex.org/W3130972714","doi":"https://doi.org/10.1201/9780429329869-19","title":"High-Throughput Sequencing for Detection of Foodborne Pathogens in Food Safety","display_name":"High-Throughput Sequencing for Detection of Foodborne Pathogens in Food Safety","publication_year":2021,"publication_date":"2021-02-16","ids":{"openalex":"https://openalex.org/W3130972714","doi":"https://doi.org/10.1201/9780429329869-19","mag":"3130972714"},"language":"en","primary_location":{"id":"doi:10.1201/9780429329869-19","doi":"https://doi.org/10.1201/9780429329869-19","is_oa":false,"landing_page_url":"https://doi.org/10.1201/9780429329869-19","pdf_url":null,"source":{"id":"https://openalex.org/S4306463075","display_name":"CRC Press eBooks","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/P4310320584","host_organization_name":"CRC Press","host_organization_lineage":["https://openalex.org/P4310320584","https://openalex.org/P4310320547"],"host_organization_lineage_names":["CRC Press","Taylor & Francis"],"type":"ebook platform"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Sequencing Technologies in Microbial Food Safety and Quality","raw_type":"book-chapter"},"volume":{"id":"https://openalex.org/W3132622398","display_name":"Sequencing Technologies in Microbial Food Safety and Quality"},"type":"book-chapter","is_traditional":true,"indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5074194699","display_name":"Mahesh Pattabhiramaiah","orcid":"https://orcid.org/0000-0001-9961-3146","observed_orcids":["https://orcid.org/0000-0001-9961-3146"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Mahesh Pattabhiramaiah","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"last","author":{"id":"https://openalex.org/A5016600929","display_name":"Shanthala Mallikarjunaiah","orcid":"https://orcid.org/0000-0002-4699-7809","observed_orcids":["https://orcid.org/0000-0002-4699-7809"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Shanthala Mallikarjunaiah","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]}],"institutions":[],"countries_distinct_count":0,"institutions_distinct_count":0,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":1.6065,"has_fulltext":false,"cited_by_count":7,"citation_normalized_percentile":{"value":0.81296069,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":88,"max":97},"biblio":{"volume":null,"issue":null,"first_page":"393","last_page":"424"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10486","display_name":"Salmonella and Campylobacter epidemiology","score":0.6571999788284302,"subfield":{"id":"https://openalex.org/subfields/1106","display_name":"Food Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10486","display_name":"Salmonella and Campylobacter epidemiology","score":0.6571999788284302,"subfield":{"id":"https://openalex.org/subfields/1106","display_name":"Food Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11957","display_name":"Food Safety and Hygiene","score":0.10140000283718109,"subfield":{"id":"https://openalex.org/subfields/1106","display_name":"Food Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.08810000121593475,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/foodborne-pathogens","display_name":"foodborne pathogens","score":0.9430000185966492},{"id":"https://openalex.org/keywords/food-safety","display_name":"food safety","score":0.878000020980835},{"id":"https://openalex.org/keywords/next-generation-sequencing","display_name":"next-generation sequencing","score":0.8809999823570251},{"id":"https://openalex.org/keywords/foodborne-outbreaks","display_name":"foodborne outbreak","score":0.6370000243186951},{"id":"https://openalex.org/keywords/metagenomics","display_name":"metagenomics","score":0.734000027179718},{"id":"https://openalex.org/keywords/whole-genome-sequencing","display_name":"whole genome sequencing","score":0.9779999852180481},{"id":"https://openalex.org/keywords/molecular-diagnosis","display_name":"molecular diagnosis","score":0.7839999794960022},{"id":"https://openalex.org/keywords/foodborne-viruses","display_name":"foodborne viruses","score":0.8899999856948853},{"id":"https://openalex.org/keywords/foodborne-bacteria","display_name":"foodborne bacteria","score":0.9290000200271606},{"id":"https://openalex.org/keywords/foodborne-fungi","display_name":"foodborne fungi","score":0.9399999976158142}],"concepts":[{"id":"https://openalex.org/C516717267","wikidata":"https://www.wikidata.org/wiki/Q909821","display_name":"Food safety","level":2,"score":0.674427330493927},{"id":"https://openalex.org/C51679486","wikidata":"https://www.wikidata.org/wiki/Q380546","display_name":"DNA sequencing","level":3,"score":0.4200275242328644},{"id":"https://openalex.org/C157764524","wikidata":"https://www.wikidata.org/wiki/Q1383412","display_name":"Throughput","level":3,"score":0.41971555352211},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.40799641609191895},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.38811761140823364},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.2725854516029358},{"id":"https://openalex.org/C31903555","wikidata":"https://www.wikidata.org/wiki/Q1637030","display_name":"Food science","level":1,"score":0.19680628180503845},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.11034694314002991},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.08419224619865417},{"id":"https://openalex.org/C76155785","wikidata":"https://www.wikidata.org/wiki/Q418","display_name":"Telecommunications","level":1,"score":0.04023480415344238},{"id":"https://openalex.org/C555944384","wikidata":"https://www.wikidata.org/wiki/Q249","display_name":"Wireless","level":2,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1201/9780429329869-19","doi":"https://doi.org/10.1201/9780429329869-19","is_oa":false,"landing_page_url":"https://doi.org/10.1201/9780429329869-19","pdf_url":null,"source":{"id":"https://openalex.org/S4306463075","display_name":"CRC Press eBooks","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/P4310320584","host_organization_name":"CRC Press","host_organization_lineage":["https://openalex.org/P4310320584","https://openalex.org/P4310320547"],"host_organization_lineage_names":["CRC Press","Taylor & Francis"],"type":"ebook platform"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Sequencing Technologies in Microbial Food Safety and Quality","raw_type":"book-chapter"}],"best_oa_location":null,"sustainable_development_goals":[{"display_name":"Good health and well-being","score":0.8371999859809875,"id":"https://metadata.un.org/sdg/3"},{"display_name":"Zero hunger","score":0.5365999937057495,"id":"https://metadata.un.org/sdg/2"}],"study_designs":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":1,"referenced_works":["https://openalex.org/W2468637465"],"related_works":["https://openalex.org/W3209028110","https://openalex.org/W4283695012","https://openalex.org/W4411087620","https://openalex.org/W2964242002","https://openalex.org/W4408030677","https://openalex.org/W2949418169","https://openalex.org/W2765523099","https://openalex.org/W378410607","https://openalex.org/W3141663222","https://openalex.org/W1994088389"],"abstract_inverted_index":{"Food":[0],"safety":[1,8,119],"is":[2,9],"everybody\u2019s":[3],"concern,":[4],"and":[5,25,57,82,106,113,150],"ensuring":[6],"food":[7,18,30,35,118],"becoming":[10],"increasingly":[11],"important":[12,124],"in":[13,86,94,130,151,163],"the":[14,26,29,67,95,110,131,140,160,164],"context":[15],"of":[16,21,28,34,91,98,133],"changing":[17],"habits,":[19],"popularization":[20],"mass":[22],"catering":[23],"establishments,":[24],"globalization":[27],"supply.":[31],"The":[32,89,122],"consumption":[33],"contaminated":[36],"by":[37],"microbial":[38,84],"pathogens,":[39],"toxic":[40],"chemicals,":[41],"or":[42],"radioactive":[43],"materials":[44],"leads":[45],"to":[46,74,80,116],"foodborne":[47,99],"diseases":[48],"(FBDs).":[49],"High-throughput":[50],"DNA":[51,69],"sequencing":[52],"methodology":[53],"has":[54],"rapidly":[55],"evolved":[56],"new":[58],"methods":[59,73,93],"are":[60,120,143,156],"continually":[61],"being":[62],"commercialized.":[63],"This":[64],"review":[65],"highlights":[66],"recent":[68],"sequencing-based":[70],"rapid":[71],"detection":[72],"trace":[75],"contamination":[76],"routes,":[77],"link":[78],"isolates":[79],"outbreaks,":[81],"analyze":[83],"populations":[85],"novel":[87],"ways.":[88],"application":[90],"these":[92],"molecular":[96],"diagnostics":[97],"pathogens":[100],"(FBPs)":[101],"focusing":[102],"on":[103],"viruses,":[104],"bacteria,":[105],"fungi":[107],"along":[108],"with":[109],"advantages,":[111],"limitations,":[112],"future":[114],"perspectives":[115],"improve":[117],"discussed.":[121],"most":[123],"difference":[125,132],"between":[126],"both":[127],"approaches":[128],"lies":[129],"target":[134],"used;":[135],"i.e.,":[136],"for":[137],"whole-genome":[138],"sequencing,":[139],"nucleic":[141,154],"acids":[142,155],"obtained":[144],"from":[145,159],"a":[146],"pure":[147],"culture":[148],"isolate,":[149],"metagenomics,":[152],"total":[153],"retrieved":[157],"directly":[158],"microbiota":[161],"present":[162],"environment":[165],"under":[166],"investigation.":[167]},"counts_by_year":[{"year":2025,"cited_by_count":4},{"year":2024,"cited_by_count":1},{"year":2021,"cited_by_count":2}],"updated_date":"2026-10-16T09:59:22.235173","created_date":"2021-03-01T00:00:00"}
