{"id":"https://openalex.org/W3107645458","doi":"https://doi.org/10.3390/microorganisms9020391","title":"Gut Microbial Composition Differs Extensively among Indian Native Chicken Breeds Originated in Different Geographical Locations and a Commercial Broiler Line, but Breed-Specific, as Well as Across-Breed Core Microbiomes, Are Found","display_name":"Gut Microbial Composition Differs Extensively among Indian Native Chicken Breeds Originated in Different Geographical Locations and a Commercial Broiler Line, but Breed-Specific, as Well as Across-Breed Core Microbiomes, Are Found","publication_year":2021,"publication_date":"2021-02-14","ids":{"openalex":"https://openalex.org/W3107645458","doi":"https://doi.org/10.3390/microorganisms9020391","mag":"3107645458","pmid":"https://pubmed.ncbi.nlm.nih.gov/33672925","pmcid":"https://www.ncbi.nlm.nih.gov/pmc/articles/7918296"},"language":"en","primary_location":{"id":"doi:10.3390/microorganisms9020391","doi":"https://doi.org/10.3390/microorganisms9020391","is_oa":true,"landing_page_url":"https://doi.org/10.3390/microorganisms9020391","pdf_url":"https://www.mdpi.com/2076-2607/9/2/391/pdf?version=1614235558","source":{"id":"https://openalex.org/S4210222090","display_name":"Microorganisms","issn_l":"2076-2607","issn":["2076-2607"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["cwts-core","doaj","norway-1","poland-40","russia-white-list-2","vabb-shw"],"host_organization":"https://openalex.org/P4310310987","host_organization_name":"Multidisciplinary Digital Publishing Institute","host_organization_lineage":["https://openalex.org/P4310310987"],"host_organization_lineage_names":["Multidisciplinary Digital Publishing Institute"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Microorganisms","raw_type":"journal-article"},"volume":null,"type":"article","is_traditional":true,"indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://www.mdpi.com/2076-2607/9/2/391/pdf?version=1614235558","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5062638702","display_name":"Shyam Sundar Paul","orcid":"https://orcid.org/0000-0002-9549-5741","observed_orcids":["https://orcid.org/0000-0002-9549-5741"]},"institutions":[{"id":"https://openalex.org/I179420787","display_name":"Indian Council of Agricultural Research","ror":"https://ror.org/04fw54a43","country_code":"IN","type":"government","lineage":["https://openalex.org/I179420787"]},{"id":"https://openalex.org/I4210106975","display_name":"Directorate of Poultry Research","ror":"https://ror.org/01c0mrz71","country_code":"IN","type":"facility","lineage":["https://openalex.org/I179420787","https://openalex.org/I4210106975"]}],"countries":["IN"],"is_corresponding":true,"raw_author_name":"Shyam Sundar Paul","raw_affiliation_strings":["Poultry Nutrition Lab, ICAR\u2014Directorate of Poultry Research, Poultry Nutrition, Hyderabad 500030, India"],"raw_orcid":"https://orcid.org/0000-0002-9549-5741","affiliations":[{"raw_affiliation_string":"Poultry Nutrition Lab, ICAR\u2014Directorate of Poultry Research, Poultry Nutrition, Hyderabad 500030, India","institution_ids":["https://openalex.org/I179420787","https://openalex.org/I4210106975"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5031700227","display_name":"RUDRA NATH CHATTERJEE","orcid":"https://orcid.org/0000-0001-9246-2883","observed_orcids":["https://orcid.org/0000-0001-9246-2883"]},"institutions":[{"id":"https://openalex.org/I4210106975","display_name":"Directorate of Poultry Research","ror":"https://ror.org/01c0mrz71","country_code":"IN","type":"facility","lineage":["https://openalex.org/I179420787","https://openalex.org/I4210106975"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Rudra Nath Chatterjee","raw_affiliation_strings":["Director\u2019s Lab, ICAR\u2014Directorate of Poultry Research, Hyderabad 500030, India"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Director\u2019s Lab, ICAR\u2014Directorate of Poultry Research, Hyderabad 500030, India","institution_ids":["https://openalex.org/I4210106975"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5020566712","display_name":"Mantena V.L.N. Raju","orcid":"https://orcid.org/0000-0001-5175-8784","observed_orcids":["https://orcid.org/0000-0001-5175-8784"]},"institutions":[{"id":"https://openalex.org/I179420787","display_name":"Indian Council of Agricultural Research","ror":"https://ror.org/04fw54a43","country_code":"IN","type":"government","lineage":["https://openalex.org/I179420787"]},{"id":"https://openalex.org/I4210106975","display_name":"Directorate of Poultry Research","ror":"https://ror.org/01c0mrz71","country_code":"IN","type":"facility","lineage":["https://openalex.org/I179420787","https://openalex.org/I4210106975"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Mantena Venkata Lakshmi Narasimha Raju","raw_affiliation_strings":["Poultry Nutrition Lab, ICAR\u2014Directorate of Poultry Research, Poultry Nutrition, Hyderabad 500030, India"],"raw_orcid":"https://orcid.org/0000-0001-5175-8784","affiliations":[{"raw_affiliation_string":"Poultry Nutrition Lab, ICAR\u2014Directorate of Poultry Research, Poultry Nutrition, Hyderabad 500030, India","institution_ids":["https://openalex.org/I179420787","https://openalex.org/I4210106975"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5113950993","display_name":"Bhukya Prakash","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I179420787","display_name":"Indian Council of Agricultural Research","ror":"https://ror.org/04fw54a43","country_code":"IN","type":"government","lineage":["https://openalex.org/I179420787"]},{"id":"https://openalex.org/I4210106975","display_name":"Directorate of Poultry Research","ror":"https://ror.org/01c0mrz71","country_code":"IN","type":"facility","lineage":["https://openalex.org/I179420787","https://openalex.org/I4210106975"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Bhukya Prakash","raw_affiliation_strings":["Poultry Nutrition Lab, ICAR\u2014Directorate of Poultry Research, Poultry Nutrition, Hyderabad 500030, India"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Poultry Nutrition Lab, ICAR\u2014Directorate of Poultry Research, Poultry Nutrition, Hyderabad 500030, India","institution_ids":["https://openalex.org/I179420787","https://openalex.org/I4210106975"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5111017244","display_name":"S.V. Rama Rao","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I179420787","display_name":"Indian Council of Agricultural Research","ror":"https://ror.org/04fw54a43","country_code":"IN","type":"government","lineage":["https://openalex.org/I179420787"]},{"id":"https://openalex.org/I4210106975","display_name":"Directorate of Poultry Research","ror":"https://ror.org/01c0mrz71","country_code":"IN","type":"facility","lineage":["https://openalex.org/I179420787","https://openalex.org/I4210106975"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Savaram Venkata Rama Rao","raw_affiliation_strings":["Poultry Nutrition Lab, ICAR\u2014Directorate of Poultry Research, Poultry Nutrition, Hyderabad 500030, India"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Poultry Nutrition Lab, ICAR\u2014Directorate of Poultry Research, Poultry Nutrition, Hyderabad 500030, India","institution_ids":["https://openalex.org/I179420787","https://openalex.org/I4210106975"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5104665832","display_name":"Satya Pal Yadav","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I4210106975","display_name":"Directorate of Poultry Research","ror":"https://ror.org/01c0mrz71","country_code":"IN","type":"facility","lineage":["https://openalex.org/I179420787","https://openalex.org/I4210106975"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Satya Pal Yadav","raw_affiliation_strings":["Animal Biotechnology Lab, ICAR\u2014Directorate of Poultry Research, Hyderabad 500030, India"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Animal Biotechnology Lab, ICAR\u2014Directorate of Poultry Research, Hyderabad 500030, India","institution_ids":["https://openalex.org/I4210106975"]}]},{"author_position":"last","author":{"id":null,"display_name":"Alagarsamy Kannan","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I179420787","display_name":"Indian Council of Agricultural Research","ror":"https://ror.org/04fw54a43","country_code":"IN","type":"government","lineage":["https://openalex.org/I179420787"]},{"id":"https://openalex.org/I4210106975","display_name":"Directorate of Poultry Research","ror":"https://ror.org/01c0mrz71","country_code":"IN","type":"facility","lineage":["https://openalex.org/I179420787","https://openalex.org/I4210106975"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Alagarsamy Kannan","raw_affiliation_strings":["Poultry Nutrition Lab, ICAR\u2014Directorate of Poultry Research, Poultry Nutrition, Hyderabad 500030, India"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Poultry Nutrition Lab, ICAR\u2014Directorate of Poultry Research, Poultry Nutrition, Hyderabad 500030, India","institution_ids":["https://openalex.org/I179420787","https://openalex.org/I4210106975"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5062638702"],"corresponding_institution_ids":["https://openalex.org/I179420787","https://openalex.org/I4210106975"],"apc_list":{"value":2000,"currency":"CHF","value_usd":2160},"apc_paid":{"value":2000,"currency":"CHF","value_usd":2160},"fwci":4.0505,"has_fulltext":true,"cited_by_count":37,"citation_normalized_percentile":{"value":0.93877498,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":93,"max":99},"biblio":{"volume":"9","issue":"2","first_page":"391","last_page":"391"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10152","display_name":"Animal Nutrition and Physiology","score":0.8363999724388123,"subfield":{"id":"https://openalex.org/subfields/1103","display_name":"Animal Science and Zoology"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10152","display_name":"Animal Nutrition and Physiology","score":0.8363999724388123,"subfield":{"id":"https://openalex.org/subfields/1103","display_name":"Animal Science and Zoology"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10066","display_name":"Gut microbiota and health","score":0.13760000467300415,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T13294","display_name":"Livestock and Poultry Management","score":0.01360000018030405,"subfield":{"id":"https://openalex.org/subfields/1103","display_name":"Animal Science and Zoology"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/gut-microbiota","display_name":"gut microbiota","score":0.9620000123977661},{"id":"https://openalex.org/keywords/chicken-breeds","display_name":"chicken breeds","score":0.8539999723434448},{"id":"https://openalex.org/keywords/aseel-chicken","display_name":"Aseel chicken","score":0.9990000128746033},{"id":"https://openalex.org/keywords/broiler-chickens","display_name":"broiler chickens","score":0.7409999966621399},{"id":"https://openalex.org/keywords/core-microbiota","display_name":"core microbiome","score":0.9200000166893005},{"id":"https://openalex.org/keywords/microbial-networks","display_name":"microbial networks","score":0.6259999871253967},{"id":"https://openalex.org/keywords/beta-diversity","display_name":"beta diversity","score":0.6549999713897705},{"id":"https://openalex.org/keywords/microbial-diversity","display_name":"microbial diversity","score":0.5509999990463257}],"concepts":[{"id":"https://openalex.org/C2776482104","wikidata":"https://www.wikidata.org/wiki/Q38829","display_name":"Breed","level":2,"score":0.8508801460266113},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.8199765682220459},{"id":"https://openalex.org/C143121216","wikidata":"https://www.wikidata.org/wiki/Q1330402","display_name":"Microbiome","level":2,"score":0.6280128955841064},{"id":"https://openalex.org/C2780289900","wikidata":"https://www.wikidata.org/wiki/Q326301","display_name":"Broiler","level":2,"score":0.6118481755256653},{"id":"https://openalex.org/C539455810","wikidata":"https://www.wikidata.org/wiki/Q739734","display_name":"Gut flora","level":2,"score":0.49536001682281494},{"id":"https://openalex.org/C90856448","wikidata":"https://www.wikidata.org/wiki/Q431","display_name":"Zoology","level":1,"score":0.4856089651584625},{"id":"https://openalex.org/C55958113","wikidata":"https://www.wikidata.org/wiki/Q169480","display_name":"Indigenous","level":2,"score":0.4505888521671295},{"id":"https://openalex.org/C174160445","wikidata":"https://www.wikidata.org/wiki/Q27980903","display_name":"Phylotype","level":4,"score":0.4170129597187042},{"id":"https://openalex.org/C42972112","wikidata":"https://www.wikidata.org/wiki/Q170201","display_name":"Veterinary medicine","level":1,"score":0.3390377163887024},{"id":"https://openalex.org/C18903297","wikidata":"https://www.wikidata.org/wiki/Q7150","display_name":"Ecology","level":1,"score":0.2918534576892853},{"id":"https://openalex.org/C42062724","wikidata":"https://www.wikidata.org/wiki/Q1209205","display_name":"16S ribosomal RNA","level":3,"score":0.2572476267814636},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.229940265417099},{"id":"https://openalex.org/C140793950","wikidata":"https://www.wikidata.org/wiki/Q168091","display_name":"Animal science","level":1,"score":0.16644170880317688},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.09987252950668335},{"id":"https://openalex.org/C203014093","wikidata":"https://www.wikidata.org/wiki/Q101929","display_name":"Immunology","level":1,"score":0.08458095788955688},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.0}],"mesh":[],"locations_count":4,"locations":[{"id":"doi:10.3390/microorganisms9020391","doi":"https://doi.org/10.3390/microorganisms9020391","is_oa":true,"landing_page_url":"https://doi.org/10.3390/microorganisms9020391","pdf_url":"https://www.mdpi.com/2076-2607/9/2/391/pdf?version=1614235558","source":{"id":"https://openalex.org/S4210222090","display_name":"Microorganisms","issn_l":"2076-2607","issn":["2076-2607"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["cwts-core","doaj","norway-1","poland-40","russia-white-list-2","vabb-shw"],"host_organization":"https://openalex.org/P4310310987","host_organization_name":"Multidisciplinary Digital Publishing Institute","host_organization_lineage":["https://openalex.org/P4310310987"],"host_organization_lineage_names":["Multidisciplinary Digital Publishing Institute"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Microorganisms","raw_type":"journal-article"},{"id":"pmid:33672925","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/33672925","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Microorganisms","raw_type":"Journal Article"},{"id":"pmh:oai:pubmedcentral.nih.gov:7918296","doi":null,"is_oa":true,"landing_page_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC7918296/","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Microorganisms","raw_type":"Text"},{"id":"pmh:oai:doaj.org/article:29530bdef7814c849e3999c04fd393e8","doi":null,"is_oa":true,"landing_page_url":"https://doaj.org/article/29530bdef7814c849e3999c04fd393e8","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Microorganisms, Vol 9, Iss 2, p 391 (2021)","raw_type":"article"}],"best_oa_location":{"id":"doi:10.3390/microorganisms9020391","doi":"https://doi.org/10.3390/microorganisms9020391","is_oa":true,"landing_page_url":"https://doi.org/10.3390/microorganisms9020391","pdf_url":"https://www.mdpi.com/2076-2607/9/2/391/pdf?version=1614235558","source":{"id":"https://openalex.org/S4210222090","display_name":"Microorganisms","issn_l":"2076-2607","issn":["2076-2607"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["cwts-core","doaj","norway-1","poland-40","russia-white-list-2","vabb-shw"],"host_organization":"https://openalex.org/P4310310987","host_organization_name":"Multidisciplinary Digital Publishing Institute","host_organization_lineage":["https://openalex.org/P4310310987"],"host_organization_lineage_names":["Multidisciplinary Digital Publishing Institute"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Microorganisms","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Zero hunger","id":"https://metadata.un.org/sdg/2","score":0.991100013256073}],"study_designs":[],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W3107645458.pdf","grobid_xml":"https://content.openalex.org/works/W3107645458.grobid-xml"},"referenced_works_count":56,"referenced_works":["https://openalex.org/W1049921135","https://openalex.org/W1576147871","https://openalex.org/W1795989887","https://openalex.org/W1988925586","https://openalex.org/W1995962575","https://openalex.org/W2012606594","https://openalex.org/W2034285706","https://openalex.org/W2040930264","https://openalex.org/W2049582304","https://openalex.org/W2056194042","https://openalex.org/W2084254277","https://openalex.org/W2085926377","https://openalex.org/W2088889758","https://openalex.org/W2090234656","https://openalex.org/W2098992053","https://openalex.org/W2108718991","https://openalex.org/W2115701239","https://openalex.org/W2125538218","https://openalex.org/W2125826054","https://openalex.org/W2126295648","https://openalex.org/W2133856765","https://openalex.org/W2145783127","https://openalex.org/W2149573313","https://openalex.org/W2152885278","https://openalex.org/W2154921479","https://openalex.org/W2187689585","https://openalex.org/W2238410827","https://openalex.org/W2278396373","https://openalex.org/W2279161330","https://openalex.org/W2293903034","https://openalex.org/W2346609569","https://openalex.org/W2488013065","https://openalex.org/W2513506562","https://openalex.org/W2552675640","https://openalex.org/W2565692782","https://openalex.org/W2590395822","https://openalex.org/W2608515760","https://openalex.org/W2725145871","https://openalex.org/W2751128104","https://openalex.org/W2767721857","https://openalex.org/W2795549399","https://openalex.org/W2806539450","https://openalex.org/W2809036954","https://openalex.org/W2809392121","https://openalex.org/W2896881594","https://openalex.org/W2902769857","https://openalex.org/W2916254331","https://openalex.org/W2918358697","https://openalex.org/W2921129204","https://openalex.org/W2923854041","https://openalex.org/W2943142421","https://openalex.org/W2955957648","https://openalex.org/W2974914619","https://openalex.org/W2988468057","https://openalex.org/W3035607191","https://openalex.org/W3092187704"],"related_works":["https://openalex.org/W4248267375","https://openalex.org/W6958098626","https://openalex.org/W4234950697","https://openalex.org/W4404001427","https://openalex.org/W2293903034","https://openalex.org/W7103105315","https://openalex.org/W7019339039","https://openalex.org/W4396662462","https://openalex.org/W6922467634","https://openalex.org/W4406597593"],"abstract_inverted_index":{"Gut":[0],"microbiota":[1,45,189],"plays":[2],"an":[3],"important":[4],"role":[5],"in":[6,23,102,106,175,212],"the":[7,12,43,50,65,71,107,114,128,155,167,181,187,206],"health":[8],"and":[9,20,60,70,119,122,131,160,194,204],"performance":[10,36],"of":[11,15,46,52,55,98,157,169,190,199],"host.":[13],"Characterizations":[14],"gut":[16,44,188],"microbiota,":[17,99],"core":[18,162],"microbiomes,":[19],"microbial":[21,173,210],"networks":[22,174],"different":[24],"chicken":[25],"breeds":[26,104,121,193],"are":[27],"expected":[28],"to":[29,208],"provide":[30],"clues":[31],"for":[32],"pathogen":[33],"exclusion,":[34],"improving":[35],"or":[37,144],"feed":[38],"efficiency.":[39],"Here,":[40],"we":[41,165],"characterized":[42],"\"finishing\"":[47],"chickens":[48,200],"(at":[49],"end":[51],"production":[53],"life)":[54],"indigenous":[56,103,133,192,214],"Indian":[57,72],"Nicobari,":[58],"Ghagus,":[59],"Aseel":[61],"breeds,":[62],"originating":[63],"from":[64],"Nicobari":[66,120],"island,":[67],"coastal":[68],"India,":[69],"mainland,":[73],"respectively,":[74],"as":[75,77,94,96],"well":[76,95],"a":[78,123],"global":[79],"commercial":[80,196],"broiler":[81,108,129,197],"line,":[82],"VenCobb":[83],"400,":[84],"using":[85],"16S":[86],"rDNA":[87],"amplicon":[88],"sequencing.":[89],"We":[90,153],"found":[91],"that":[92],"diversity,":[93],"richness":[97],"was":[100],"higher":[101],"than":[105],"line.":[109],"Beta":[110],"diversity":[111,211],"analysis":[112,137],"indicated":[113],"highest":[115],"overlap":[116,126],"between":[117,127],"Ghagus":[118],"very":[124],"low":[125],"line":[130,198],"all":[132,176],"breeds.":[134,215],"Linear":[135],"discriminant":[136],"effect":[138],"size":[139],"(LEfSe)":[140],"revealed":[141],"82":[142],"breed-":[143],"line-specific":[145],"phylotype":[146],"operational":[147],"taxonomic":[148],"unit":[149],"(OTU)":[150],"level":[151],"biomarkers.":[152],"confirm":[154],"presence":[156],"breed":[158,170],"specific":[159,171],"across-breed":[161],"microbiomes.":[163],"Additionally,":[164],"show":[166],"existence":[168],"complex":[172],"groups.":[177],"This":[178],"study":[179,209],"provides":[180],"first":[182],"(and":[183],"comprehensive)":[184],"insight":[185],"into":[186],"three":[191],"one":[195],"reared":[201],"without":[202],"antimicrobials,":[203],"underscores":[205],"need":[207],"other":[213]},"counts_by_year":[{"year":2026,"cited_by_count":7},{"year":2025,"cited_by_count":9},{"year":2024,"cited_by_count":2},{"year":2023,"cited_by_count":8},{"year":2022,"cited_by_count":8},{"year":2021,"cited_by_count":3}],"updated_date":"2026-11-12T12:28:57.059296","created_date":"2020-12-07T00:00:00"}