{"id":"https://openalex.org/W3106773114","doi":"https://doi.org/10.1039/d0nr06031c","title":"The hydrogen-bond configuration modulates the energy transfer efficiency in helical protein nanotubes","display_name":"The hydrogen-bond configuration modulates the energy transfer efficiency in helical protein nanotubes","publication_year":2020,"publication_date":"2020-11-30","ids":{"openalex":"https://openalex.org/W3106773114","doi":"https://doi.org/10.1039/d0nr06031c","mag":"3106773114","pmid":"https://pubmed.ncbi.nlm.nih.gov/33367447"},"language":"en","primary_location":{"id":"doi:10.1039/d0nr06031c","doi":"https://doi.org/10.1039/d0nr06031c","is_oa":false,"landing_page_url":"https://doi.org/10.1039/d0nr06031c","pdf_url":null,"source":{"id":"https://openalex.org/S23181512","display_name":"Nanoscale","issn_l":"2040-3364","issn":["2040-3364","2040-3372"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["cwts-core","dongbi-c","jufo-3","ki-jl-2","medline","norway-2","poland-140","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310320556","host_organization_name":"Royal Society of Chemistry","host_organization_lineage":["https://openalex.org/P4310320556"],"host_organization_lineage_names":["Royal Society of Chemistry"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nanoscale","raw_type":"journal-article"},"volume":null,"type":"article","is_traditional":true,"indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5101400987","display_name":"Jinlong He","orcid":"https://orcid.org/0000-0002-0772-1594","observed_orcids":["https://orcid.org/0000-0002-0772-1594"]},"institutions":[{"id":"https://openalex.org/I121980950","display_name":"Utah State University","ror":"https://ror.org/00h6set76","country_code":"US","type":"education","lineage":["https://openalex.org/I121980950"]},{"id":"https://openalex.org/I84392919","display_name":"Temple University","ror":"https://ror.org/00kx1jb78","country_code":"US","type":"education","lineage":["https://openalex.org/I84392919"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jinlong He","raw_affiliation_strings":["Department of Mechanical Engineering","Department of Mechanical and Aerospace Engineering","Philadelphia","Temple University","USA","Department of Mechanical Engineering, Temple University, Philadelphia, PA 19122, USA","Department of Mechanical and Aerospace Engineering, Utah State University, Logan, Utah 84322, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Mechanical Engineering","institution_ids":[]},{"raw_affiliation_string":"Department of Mechanical and Aerospace Engineering","institution_ids":[]},{"raw_affiliation_string":"Philadelphia","institution_ids":[]},{"raw_affiliation_string":"Temple University","institution_ids":["https://openalex.org/I84392919"]},{"raw_affiliation_string":"USA","institution_ids":[]},{"raw_affiliation_string":"Department of Mechanical Engineering, Temple University, Philadelphia, PA 19122, USA","institution_ids":["https://openalex.org/I84392919"]},{"raw_affiliation_string":"Department of Mechanical and Aerospace Engineering, Utah State University, Logan, Utah 84322, USA","institution_ids":["https://openalex.org/I121980950"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5070650866","display_name":"Lin Zhang","orcid":"https://orcid.org/0000-0001-5830-5358","observed_orcids":["https://orcid.org/0000-0001-5830-5358"]},"institutions":[{"id":"https://openalex.org/I154099455","display_name":"Shandong University","ror":"https://ror.org/0207yh398","country_code":"CN","type":"education","lineage":["https://openalex.org/I154099455"]},{"id":"https://openalex.org/I170201317","display_name":"University of Pittsburgh","ror":"https://ror.org/01an3r305","country_code":"US","type":"education","lineage":["https://openalex.org/I170201317"]}],"countries":["CN","US"],"is_corresponding":false,"raw_author_name":"Lin Zhang","raw_affiliation_strings":["Department of Engineering Mechanics","Jinan","P.R. China","School of Civil Engineering","Shandong University","Department of Engineering Mechanics, School of Civil Engineering, Shandong University, Jinan, P.R. China","Department of Mechanical Engineering and Materials Science, University of Pittsburgh, Pittsburgh, PA 15261, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Engineering Mechanics","institution_ids":[]},{"raw_affiliation_string":"Jinan","institution_ids":[]},{"raw_affiliation_string":"P.R. China","institution_ids":[]},{"raw_affiliation_string":"School of Civil Engineering","institution_ids":[]},{"raw_affiliation_string":"Shandong University","institution_ids":["https://openalex.org/I154099455"]},{"raw_affiliation_string":"Department of Engineering Mechanics, School of Civil Engineering, Shandong University, Jinan, P.R. China","institution_ids":["https://openalex.org/I154099455"]},{"raw_affiliation_string":"Department of Mechanical Engineering and Materials Science, University of Pittsburgh, Pittsburgh, PA 15261, USA","institution_ids":["https://openalex.org/I170201317"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5100605742","display_name":"Ling Liu","orcid":"https://orcid.org/0000-0001-8743-4570","observed_orcids":["https://orcid.org/0000-0001-8743-4570"]},"institutions":[{"id":"https://openalex.org/I84392919","display_name":"Temple University","ror":"https://ror.org/00kx1jb78","country_code":"US","type":"education","lineage":["https://openalex.org/I84392919"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Ling Liu","raw_affiliation_strings":["Department of Mechanical Engineering","Philadelphia","Temple University","USA","Department of Mechanical Engineering, Temple University, Philadelphia, PA 19122, USA"],"raw_orcid":"https://orcid.org/0000-0001-8743-4570","affiliations":[{"raw_affiliation_string":"Department of Mechanical Engineering","institution_ids":[]},{"raw_affiliation_string":"Philadelphia","institution_ids":[]},{"raw_affiliation_string":"Temple University","institution_ids":["https://openalex.org/I84392919"]},{"raw_affiliation_string":"USA","institution_ids":[]},{"raw_affiliation_string":"Department of Mechanical Engineering, Temple University, Philadelphia, PA 19122, USA","institution_ids":["https://openalex.org/I84392919"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5100605742"],"corresponding_institution_ids":["https://openalex.org/I84392919"],"apc_list":null,"apc_paid":null,"fwci":0.4669,"has_fulltext":false,"cited_by_count":9,"citation_normalized_percentile":{"value":0.58338798,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":87,"max":95},"biblio":{"volume":"13","issue":"2","first_page":"991","last_page":"999"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11277","display_name":"Thermal properties of materials","score":0.9682999849319458,"subfield":{"id":"https://openalex.org/subfields/2505","display_name":"Materials Chemistry"},"field":{"id":"https://openalex.org/fields/25","display_name":"Materials Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T11277","display_name":"Thermal properties of materials","score":0.9682999849319458,"subfield":{"id":"https://openalex.org/subfields/2505","display_name":"Materials Chemistry"},"field":{"id":"https://openalex.org/fields/25","display_name":"Materials Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.006500000134110451,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11177","display_name":"Spectroscopy and Quantum Chemical Studies","score":0.00570000009611249,"subfield":{"id":"https://openalex.org/subfields/3107","display_name":"Atomic and Molecular Physics, and Optics"},"field":{"id":"https://openalex.org/fields/31","display_name":"Physics and Astronomy"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/heat-transport","display_name":"heat transport","score":0.8420000076293945},{"id":"https://openalex.org/keywords/thermal-conductivity","display_name":"thermal conductivity","score":0.8019999861717224},{"id":"https://openalex.org/keywords/pi-helix","display_name":"pi-helix","score":0.7179999947547913},{"id":"https://openalex.org/keywords/alpha-helix","display_name":"alpha-helix","score":0.984000027179718},{"id":"https://openalex.org/keywords/310-helix","display_name":"310-helix","score":0.9900000095367432},{"id":"https://openalex.org/keywords/phonon-dispersion","display_name":"phonon dispersion","score":0.8240000009536743},{"id":"https://openalex.org/keywords/group-velocity","display_name":"group velocity","score":0.6520000100135803},{"id":"https://openalex.org/keywords/relaxation-time","display_name":"relaxation time","score":0.8479999899864197},{"id":"https://openalex.org/keywords/hydrogen-bond-strength","display_name":"hydrogen bond strength","score":0.8889999985694885}],"concepts":[{"id":"https://openalex.org/C112887158","wikidata":"https://www.wikidata.org/wiki/Q169324","display_name":"Hydrogen bond","level":3,"score":0.6119163632392883},{"id":"https://openalex.org/C192562407","wikidata":"https://www.wikidata.org/wiki/Q228736","display_name":"Materials science","level":0,"score":0.4889947175979614},{"id":"https://openalex.org/C2778530040","wikidata":"https://www.wikidata.org/wiki/Q1937315","display_name":"Helix (gastropod)","level":3,"score":0.4867129623889923},{"id":"https://openalex.org/C106447425","wikidata":"https://www.wikidata.org/wiki/Q11379","display_name":"Energy transfer","level":2,"score":0.4439615309238434},{"id":"https://openalex.org/C2776401178","wikidata":"https://www.wikidata.org/wiki/Q12050496","display_name":"Feature (linguistics)","level":2,"score":0.4201827049255371},{"id":"https://openalex.org/C159467904","wikidata":"https://www.wikidata.org/wiki/Q2001702","display_name":"Chemical physics","level":1,"score":0.3812776207923889},{"id":"https://openalex.org/C171250308","wikidata":"https://www.wikidata.org/wiki/Q11468","display_name":"Nanotechnology","level":1,"score":0.3643403649330139},{"id":"https://openalex.org/C8010536","wikidata":"https://www.wikidata.org/wiki/Q160398","display_name":"Crystallography","level":1,"score":0.3490716814994812},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.3314732313156128},{"id":"https://openalex.org/C32909587","wikidata":"https://www.wikidata.org/wiki/Q11369","display_name":"Molecule","level":2,"score":0.12961557507514954},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.06967392563819885},{"id":"https://openalex.org/C178790620","wikidata":"https://www.wikidata.org/wiki/Q11351","display_name":"Organic chemistry","level":1,"score":0.0},{"id":"https://openalex.org/C41895202","wikidata":"https://www.wikidata.org/wiki/Q8162","display_name":"Linguistics","level":1,"score":0.0},{"id":"https://openalex.org/C2779965526","wikidata":"https://www.wikidata.org/wiki/Q308841","display_name":"Snail","level":2,"score":0.0},{"id":"https://openalex.org/C18903297","wikidata":"https://www.wikidata.org/wiki/Q7150","display_name":"Ecology","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D004735","descriptor_name":"Energy Transfer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006859","descriptor_name":"Hydrogen","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006860","descriptor_name":"Hydrogen Bonding","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D043942","descriptor_name":"Nanotubes","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":3,"locations":[{"id":"doi:10.1039/d0nr06031c","doi":"https://doi.org/10.1039/d0nr06031c","is_oa":false,"landing_page_url":"https://doi.org/10.1039/d0nr06031c","pdf_url":null,"source":{"id":"https://openalex.org/S23181512","display_name":"Nanoscale","issn_l":"2040-3364","issn":["2040-3364","2040-3372"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["cwts-core","dongbi-c","jufo-3","ki-jl-2","medline","norway-2","poland-140","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310320556","host_organization_name":"Royal Society of Chemistry","host_organization_lineage":["https://openalex.org/P4310320556"],"host_organization_lineage_names":["Royal Society of Chemistry"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nanoscale","raw_type":"journal-article"},{"id":"pmid:33367447","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/33367447","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nanoscale","raw_type":"Journal Article"},{"id":"pmh:oai:osti.gov:1745070","doi":null,"is_oa":false,"landing_page_url":"https://www.osti.gov/biblio/1745070","pdf_url":null,"source":{"id":"https://openalex.org/S4306402487","display_name":"OSTI OAI (U.S. Department of Energy Office of Scientific and Technical Information)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I139351228","host_organization_name":"Office of Scientific and Technical Information","host_organization_lineage":["https://openalex.org/I139351228"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[],"study_designs":[],"awards":[{"id":"https://openalex.org/G1187630603","display_name":null,"funder_award_id":"DE-AC07-05-ID14517","funder_id":"https://openalex.org/F4320332364","funder_display_name":"Office of Nuclear Energy"}],"funders":[{"id":"https://openalex.org/F4320332364","display_name":"Office of Nuclear Energy","ror":"https://ror.org/05tj7dm33"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":77,"referenced_works":["https://openalex.org/W39337161","https://openalex.org/W116239404","https://openalex.org/W1528959001","https://openalex.org/W1794232736","https://openalex.org/W1970249864","https://openalex.org/W1972543096","https://openalex.org/W1985945427","https://openalex.org/W1988091937","https://openalex.org/W1989447327","https://openalex.org/W1989701810","https://openalex.org/W1990213570","https://openalex.org/W1991799740","https://openalex.org/W1995808589","https://openalex.org/W2005385490","https://openalex.org/W2005807599","https://openalex.org/W2008628207","https://openalex.org/W2013226440","https://openalex.org/W2017428798","https://openalex.org/W2018530279","https://openalex.org/W2019465613","https://openalex.org/W2020249020","https://openalex.org/W2020622784","https://openalex.org/W2025468090","https://openalex.org/W2027408247","https://openalex.org/W2028880253","https://openalex.org/W2031993878","https://openalex.org/W2035300146","https://openalex.org/W2037176665","https://openalex.org/W2045529907","https://openalex.org/W2047549277","https://openalex.org/W2058468006","https://openalex.org/W2059412749","https://openalex.org/W2069589532","https://openalex.org/W2070624418","https://openalex.org/W2072201450","https://openalex.org/W2072221096","https://openalex.org/W2077404364","https://openalex.org/W2083164105","https://openalex.org/W2083816365","https://openalex.org/W2088732846","https://openalex.org/W2089120796","https://openalex.org/W2090237414","https://openalex.org/W2091342349","https://openalex.org/W2093203245","https://openalex.org/W2093823200","https://openalex.org/W2093914988","https://openalex.org/W2096346675","https://openalex.org/W2101195770","https://openalex.org/W2108802318","https://openalex.org/W2109319472","https://openalex.org/W2109872885","https://openalex.org/W2114454800","https://openalex.org/W2114527797","https://openalex.org/W2123868236","https://openalex.org/W2125297144","https://openalex.org/W2132236450","https://openalex.org/W2132525235","https://openalex.org/W2167258735","https://openalex.org/W2320534486","https://openalex.org/W2359094391","https://openalex.org/W2474971988","https://openalex.org/W2548947386","https://openalex.org/W2572184500","https://openalex.org/W2591520656","https://openalex.org/W2766899646","https://openalex.org/W2777372388","https://openalex.org/W2828926055","https://openalex.org/W2888919163","https://openalex.org/W2898210859","https://openalex.org/W2910418222","https://openalex.org/W2941009344","https://openalex.org/W2949105891","https://openalex.org/W2972671588","https://openalex.org/W3006287082","https://openalex.org/W4235196159","https://openalex.org/W4240873748","https://openalex.org/W4312040252"],"related_works":["https://openalex.org/W2323087088","https://openalex.org/W1680856221","https://openalex.org/W4401979219","https://openalex.org/W4247610571","https://openalex.org/W2115148914","https://openalex.org/W1935737558","https://openalex.org/W4378952159","https://openalex.org/W2090237414","https://openalex.org/W4410246571","https://openalex.org/W4224943362"],"abstract_inverted_index":{"Energy":[0],"transport":[1,28,32,52,92,110],"in":[2,15,29,53,137],"proteins":[3,138],"is":[4,61,87,111,119],"critical":[5],"to":[6,24,63,89],"a":[7,54,130,141],"variety":[8],"of":[9,40,56,73,81,145],"physical,":[10],"chemical,":[11],"and":[12,76,105,139],"biological":[13],"processes":[14,33],"living":[16],"organisms.":[17],"While":[18],"strenuous":[19],"efforts":[20],"have":[21,64],"been":[22],"made":[23],"study":[25],"vibrational":[26],"energy":[27,51,98,109,135],"proteins,":[30,41],"thermal":[31,67,91],"across":[34],"the":[35,65,74,82,95,115,123],"most":[36],"fundamental":[37,127],"building":[38],"blocks":[39],"i.e.":[42],"helices,":[43],"are":[44],"not":[45],"well":[46],"understood.":[47],"This":[48],"work":[49],"studies":[50],"group":[55,103],"\"isomer\"":[57],"helices.":[58],"The":[59,84,108],"\u03c0-helix":[60],"shown":[62],"highest":[66],"conductivity,":[68],"110%":[69],"higher":[70,78],"than":[71,79],"that":[72,80],"\u03b1-helix":[75],"207%":[77],"310-helix.":[83],"H-bond":[85,116,124],"connectivity":[86],"found":[88],"govern":[90],"mechanisms":[93],"including":[94],"phonon":[96],"spectral":[97],"density,":[99],"dispersion,":[100],"mode-specific":[101],"transport,":[102],"velocity,":[104],"relaxation":[106],"time.":[107],"strongly":[112],"correlated":[113],"with":[114,148],"strength":[117],"which":[118],"also":[120],"modulated":[121],"by":[122],"connectivity.":[125],"These":[126],"insights":[128],"provide":[129],"novel":[131,146],"perspective":[132],"for":[133],"understanding":[134],"transfer":[136],"guiding":[140],"rational":[142],"molecule-level":[143],"design":[144],"materials":[147],"configurable":[149],"H-bonds.":[150]},"counts_by_year":[{"year":2025,"cited_by_count":2},{"year":2024,"cited_by_count":2},{"year":2023,"cited_by_count":2},{"year":2022,"cited_by_count":2},{"year":2021,"cited_by_count":1}],"updated_date":"2026-11-04T10:54:05.112534","created_date":"2020-12-07T00:00:00"}
