{"id":"https://openalex.org/W3093188317","doi":"https://doi.org/10.3389/fgene.2020.567757","title":"Approximate Genome-Based Kernel Models for Large Data Sets Including Main Effects and Interactions","display_name":"Approximate Genome-Based Kernel Models for Large Data Sets Including Main Effects and Interactions","publication_year":2020,"publication_date":"2020-10-15","ids":{"openalex":"https://openalex.org/W3093188317","doi":"https://doi.org/10.3389/fgene.2020.567757","mag":"3093188317","pmid":"https://pubmed.ncbi.nlm.nih.gov/33193659","pmcid":"https://www.ncbi.nlm.nih.gov/pmc/articles/7594507"},"language":"en","primary_location":{"id":"doi:10.3389/fgene.2020.567757","doi":"https://doi.org/10.3389/fgene.2020.567757","is_oa":true,"landing_page_url":"https://doi.org/10.3389/fgene.2020.567757","pdf_url":"https://www.frontiersin.org/articles/10.3389/fgene.2020.567757/pdf","source":{"id":"https://openalex.org/S2597340651","display_name":"Frontiers in Genetics","issn_l":"1664-8021","issn":["1664-8021"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["anvur-scientific","cwts-core","doaj","jufo-1","ki-jl-1","norway-1","poland-100","russia-white-list-2","vabb-shw"],"host_organization":"https://openalex.org/P4310320527","host_organization_name":"Frontiers Media","host_organization_lineage":["https://openalex.org/P4310320527"],"host_organization_lineage_names":["Frontiers Media"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Frontiers in Genetics","raw_type":"journal-article"},"volume":null,"type":"article","is_traditional":true,"indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://www.frontiersin.org/articles/10.3389/fgene.2020.567757/pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5037634645","display_name":"Jaime Cuevas","orcid":"https://orcid.org/0000-0002-0685-2867","observed_orcids":["https://orcid.org/0000-0002-0685-2867"]},"institutions":[{"id":"https://openalex.org/I154691954","display_name":"University of Quintana Roo","ror":"https://ror.org/029w3ge75","country_code":"MX","type":"education","lineage":["https://openalex.org/I154691954"]}],"countries":["MX"],"is_corresponding":false,"raw_author_name":"Jaime Cuevas","raw_affiliation_strings":["Universidad de Quintana Roo, Chetumal, Mexico"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Universidad de Quintana Roo, Chetumal, Mexico","institution_ids":["https://openalex.org/I154691954"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5049389291","display_name":"Osval Antonio Montesinos-L\u00f3pez","orcid":"https://orcid.org/0000-0002-3973-6547","observed_orcids":["https://orcid.org/0000-0002-3973-6547","https://orcid.org/0000-0003-4464-3385"]},"institutions":[{"id":"https://openalex.org/I916541031","display_name":"Universidad de Colima","ror":"https://ror.org/04znxe670","country_code":"MX","type":"education","lineage":["https://openalex.org/I916541031"]}],"countries":["MX"],"is_corresponding":false,"raw_author_name":"Osval A. Montesinos-L\u00f3pez","raw_affiliation_strings":["Facultad de Telem\u00e1tica, Universidad de Colima, Colima, Mexico"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Facultad de Telem\u00e1tica, Universidad de Colima, Colima, Mexico","institution_ids":["https://openalex.org/I916541031"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5075890707","display_name":"Johannes W. R. Martini","orcid":"https://orcid.org/0000-0003-0628-6794","observed_orcids":["https://orcid.org/0000-0003-0628-6794"]},"institutions":[{"id":"https://openalex.org/I21740220","display_name":"Centro Internacional de Mejoramiento de Ma\u00edz Y Trigo","ror":"https://ror.org/03gvhpa76","country_code":"MX","type":"nonprofit","lineage":["https://openalex.org/I1286583668","https://openalex.org/I21740220"]}],"countries":["MX"],"is_corresponding":false,"raw_author_name":"J. W. R. Martini","raw_affiliation_strings":["International Maize and Wheat Improvement Center (CIMMYT), Texcoco, Mexico"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"International Maize and Wheat Improvement Center (CIMMYT), Texcoco, Mexico","institution_ids":["https://openalex.org/I21740220"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5073803808","display_name":"Paulino P\u00e9rez\u2010Rodr\u00edguez","orcid":"https://orcid.org/0000-0002-3202-1784","observed_orcids":["https://orcid.org/0000-0002-3202-1784"]},"institutions":[{"id":"https://openalex.org/I4210097172","display_name":"Colegio de Postgraduados","ror":"https://ror.org/00qfnf017","country_code":"MX","type":"education","lineage":["https://openalex.org/I4210097172"]}],"countries":["MX"],"is_corresponding":false,"raw_author_name":"Paulino P\u00e9rez-Rodr\u00edguez","raw_affiliation_strings":["Colegio de Postgraduados, Texcoco, Mexico"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Colegio de Postgraduados, Texcoco, Mexico","institution_ids":["https://openalex.org/I4210097172"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5079140779","display_name":"Morten Lillemo","orcid":"https://orcid.org/0000-0002-8594-8794","observed_orcids":["https://orcid.org/0000-0002-8594-8794"]},"institutions":[{"id":"https://openalex.org/I54108979","display_name":"Norwegian University of Life Sciences","ror":"https://ror.org/04a1mvv97","country_code":"NO","type":"education","lineage":["https://openalex.org/I54108979"]}],"countries":["NO"],"is_corresponding":false,"raw_author_name":"Morten Lillemo","raw_affiliation_strings":["Department of Plant Sciences (IPV), Norwegian University of Life Sciences (NMBU), \u00c5s, Norway"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Plant Sciences (IPV), Norwegian University of Life Sciences (NMBU), \u00c5s, Norway","institution_ids":["https://openalex.org/I54108979"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5076158905","display_name":"Jos\u00e9 Luis Crossa","orcid":"https://orcid.org/0000-0001-9429-5855","observed_orcids":["https://orcid.org/0000-0001-9429-5855"]},"institutions":[{"id":"https://openalex.org/I21740220","display_name":"Centro Internacional de Mejoramiento de Ma\u00edz Y Trigo","ror":"https://ror.org/03gvhpa76","country_code":"MX","type":"nonprofit","lineage":["https://openalex.org/I1286583668","https://openalex.org/I21740220"]},{"id":"https://openalex.org/I4210097172","display_name":"Colegio de Postgraduados","ror":"https://ror.org/00qfnf017","country_code":"MX","type":"education","lineage":["https://openalex.org/I4210097172"]}],"countries":["MX"],"is_corresponding":true,"raw_author_name":"Jose Crossa","raw_affiliation_strings":["Colegio de Postgraduados, Texcoco, Mexico","International Maize and Wheat Improvement Center (CIMMYT), Texcoco, Mexico"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Colegio de Postgraduados, Texcoco, Mexico","institution_ids":["https://openalex.org/I4210097172"]},{"raw_affiliation_string":"International Maize and Wheat Improvement Center (CIMMYT), Texcoco, Mexico","institution_ids":["https://openalex.org/I21740220"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5076158905"],"corresponding_institution_ids":["https://openalex.org/I21740220","https://openalex.org/I4210097172"],"apc_list":{"value":2950,"currency":"USD","value_usd":2950},"apc_paid":{"value":2519,"currency":"EUR","value_usd":2716},"fwci":1.9166,"has_fulltext":true,"cited_by_count":20,"citation_normalized_percentile":{"value":0.85839461,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":88,"max":99},"biblio":{"volume":"11","issue":null,"first_page":"567757","last_page":"567757"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10594","display_name":"Genetic and phenotypic traits in livestock","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10594","display_name":"Genetic and phenotypic traits in livestock","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11468","display_name":"Genetic Mapping and Diversity in Plants and Animals","score":9.999999747378752e-05,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11229","display_name":"Genetics and Plant Breeding","score":0.0,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/genomic-prediction","display_name":"genomic prediction","score":0.871999979019165},{"id":"https://openalex.org/keywords/genomic-selection","display_name":"genomic selection","score":0.9760000109672546},{"id":"https://openalex.org/keywords/kernel-methods","display_name":"kernel methods","score":0.722000002861023},{"id":"https://openalex.org/keywords/genomic-relationship-matrix","display_name":"genomic relationship matrix","score":0.6990000009536743},{"id":"https://openalex.org/keywords/main-effects-and-interactions","display_name":"main effects and interactions","score":0.7590000033378601},{"id":"https://openalex.org/keywords/large-data-sets","display_name":"large data sets","score":0.6790000200271606},{"id":"https://openalex.org/keywords/computational-efficiency","display_name":"computational efficiency","score":0.6570000052452087},{"id":"https://openalex.org/keywords/animal-breeding","display_name":"animal breeding","score":0.6809999942779541},{"id":"https://openalex.org/keywords/plant-breeding","display_name":"plant breeding","score":1.0}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5430338978767395},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.5131662487983704},{"id":"https://openalex.org/C74193536","wikidata":"https://www.wikidata.org/wiki/Q574844","display_name":"Kernel (algebra)","level":2,"score":0.464909166097641},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.4468992054462433},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.368634968996048},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.22239241003990173},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.1881542205810547},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.13040444254875183},{"id":"https://openalex.org/C114614502","wikidata":"https://www.wikidata.org/wiki/Q76592","display_name":"Combinatorics","level":1,"score":0.0}],"mesh":[],"locations_count":5,"locations":[{"id":"doi:10.3389/fgene.2020.567757","doi":"https://doi.org/10.3389/fgene.2020.567757","is_oa":true,"landing_page_url":"https://doi.org/10.3389/fgene.2020.567757","pdf_url":"https://www.frontiersin.org/articles/10.3389/fgene.2020.567757/pdf","source":{"id":"https://openalex.org/S2597340651","display_name":"Frontiers in Genetics","issn_l":"1664-8021","issn":["1664-8021"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["anvur-scientific","cwts-core","doaj","jufo-1","ki-jl-1","norway-1","poland-100","russia-white-list-2","vabb-shw"],"host_organization":"https://openalex.org/P4310320527","host_organization_name":"Frontiers Media","host_organization_lineage":["https://openalex.org/P4310320527"],"host_organization_lineage_names":["Frontiers Media"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Frontiers in Genetics","raw_type":"journal-article"},{"id":"pmid:33193659","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/33193659","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Frontiers in genetics","raw_type":"Journal Article"},{"id":"pmh:oai:pubmedcentral.nih.gov:7594507","doi":null,"is_oa":true,"landing_page_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC7594507/","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Front Genet","raw_type":"Text"},{"id":"pmh:oai:doaj.org/article:edb4ccaffea243ea859c8aa3bdee4d7c","doi":null,"is_oa":true,"landing_page_url":"https://doaj.org/article/edb4ccaffea243ea859c8aa3bdee4d7c","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Frontiers in Genetics, Vol 11 (2020)","raw_type":"article"},{"id":"pmh:oai:nmbu.brage.unit.no:11250/2690362","doi":null,"is_oa":true,"landing_page_url":"https://hdl.handle.net/11250/2690362","pdf_url":null,"source":{"id":"https://openalex.org/S7407064446","display_name":"NORA - Norwegian Open Research Archives","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"11","raw_type":"info:eu-repo/semantics/article"}],"best_oa_location":{"id":"doi:10.3389/fgene.2020.567757","doi":"https://doi.org/10.3389/fgene.2020.567757","is_oa":true,"landing_page_url":"https://doi.org/10.3389/fgene.2020.567757","pdf_url":"https://www.frontiersin.org/articles/10.3389/fgene.2020.567757/pdf","source":{"id":"https://openalex.org/S2597340651","display_name":"Frontiers in Genetics","issn_l":"1664-8021","issn":["1664-8021"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["anvur-scientific","cwts-core","doaj","jufo-1","ki-jl-1","norway-1","poland-100","russia-white-list-2","vabb-shw"],"host_organization":"https://openalex.org/P4310320527","host_organization_name":"Frontiers Media","host_organization_lineage":["https://openalex.org/P4310320527"],"host_organization_lineage_names":["Frontiers Media"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Frontiers in Genetics","raw_type":"journal-article"},"sustainable_development_goals":[],"study_designs":[],"awards":[],"funders":[],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W3093188317.pdf","grobid_xml":"https://content.openalex.org/works/W3093188317.grobid-xml"},"referenced_works_count":37,"referenced_works":["https://openalex.org/W137285897","https://openalex.org/W1512149552","https://openalex.org/W1580216809","https://openalex.org/W1660492679","https://openalex.org/W1777124189","https://openalex.org/W1928998639","https://openalex.org/W1970149620","https://openalex.org/W2000966824","https://openalex.org/W2007169373","https://openalex.org/W2030126026","https://openalex.org/W2064013109","https://openalex.org/W2067252216","https://openalex.org/W2067715889","https://openalex.org/W2109349581","https://openalex.org/W2112545207","https://openalex.org/W2122617678","https://openalex.org/W2127684760","https://openalex.org/W2127843966","https://openalex.org/W2129564505","https://openalex.org/W2132501280","https://openalex.org/W2139280752","https://openalex.org/W2151391832","https://openalex.org/W2154562310","https://openalex.org/W2154978106","https://openalex.org/W2168952261","https://openalex.org/W2173001608","https://openalex.org/W2234549913","https://openalex.org/W2270508619","https://openalex.org/W2289420281","https://openalex.org/W2301928852","https://openalex.org/W2523473862","https://openalex.org/W2737500854","https://openalex.org/W2760544538","https://openalex.org/W2883880894","https://openalex.org/W3001208556","https://openalex.org/W3033401248","https://openalex.org/W4211049957"],"related_works":["https://openalex.org/W2523473862","https://openalex.org/W2883880894","https://openalex.org/W2788490121","https://openalex.org/W7010204770","https://openalex.org/W4405319447","https://openalex.org/W2253398379","https://openalex.org/W2540923435","https://openalex.org/W4226055043","https://openalex.org/W7160334928","https://openalex.org/W2122617678"],"abstract_inverted_index":{"The":[0],"rapid":[1],"development":[2],"of":[3,30,79],"molecular":[4],"markers":[5],"and":[6,18,23,49,61],"sequencing":[7],"technologies":[8],"has":[9],"made":[10],"it":[11],"possible":[12],"to":[13,74],"use":[14],"genomic":[15,44,57],"prediction":[16],"(GP)":[17],"selection":[19],"(GS)":[20],"in":[21,66],"animal":[22],"plant":[24],"breeding.":[25],"However,":[26],"when":[27,40,56],"the":[28,67],"number":[29,78],"observations":[31],"(n)":[32],"is":[33],"large":[34,43],"(thousands":[35],"or":[36],"more),":[37],"computational":[38],"difficulties":[39],"handling":[41],"these":[42],"kernel":[45],"relationship":[46],"matrices":[47],"(inverting":[48],"decomposing)":[50],"increase":[51],"exponentially.":[52],"This":[53],"problem":[54],"increases":[55],"\u00d7":[58],"environment":[59],"interaction":[60],"multi-trait":[62],"kernels":[63],"are":[64],"included":[65],"model.":[68],"In":[69],"this":[70],"research":[71],"we":[72],"propose":[73],"select":[75],"a":[76],"low":[77],"lines":[80],"(observations)":[81],"m":[82],"(m":[83]},"counts_by_year":[{"year":2026,"cited_by_count":3},{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":10},{"year":2021,"cited_by_count":5}],"updated_date":"2026-11-10T11:39:43.021295","created_date":"2020-10-22T00:00:00"}