{"id":"https://openalex.org/W3092392009","doi":"https://doi.org/10.1016/j.diagmicrobio.2020.115233","title":"Genomic characteristics of listeria monocytogenes causing invasive listeriosis in Japan","display_name":"Genomic characteristics of listeria monocytogenes causing invasive listeriosis in Japan","publication_year":2020,"publication_date":"2020-10-05","ids":{"openalex":"https://openalex.org/W3092392009","doi":"https://doi.org/10.1016/j.diagmicrobio.2020.115233","mag":"3092392009","pmid":"https://pubmed.ncbi.nlm.nih.gov/33340935"},"language":"en","primary_location":{"id":"doi:10.1016/j.diagmicrobio.2020.115233","doi":"https://doi.org/10.1016/j.diagmicrobio.2020.115233","is_oa":false,"landing_page_url":"https://doi.org/10.1016/j.diagmicrobio.2020.115233","pdf_url":null,"source":{"id":"https://openalex.org/S80485324","display_name":"Diagnostic Microbiology and Infectious Disease","issn_l":"0732-8893","issn":["0732-8893","1879-0070"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["cwts-core","dongbi-d","doyens","jufo-1","ki-jl-1","medline","norway-1","poland-70","russia-white-list-2","vabb-shw"],"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Diagnostic Microbiology and Infectious Disease","raw_type":"journal-article"},"volume":null,"type":"article","is_traditional":true,"indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5072085018","display_name":"Hiroaki Baba","orcid":"https://orcid.org/0000-0001-5487-6698","observed_orcids":["https://orcid.org/0000-0001-5487-6698"]},"institutions":[{"id":"https://openalex.org/I201537933","display_name":"Tohoku University","ror":"https://ror.org/01dq60k83","country_code":"JP","type":"education","lineage":["https://openalex.org/I201537933"]}],"countries":["JP"],"is_corresponding":true,"raw_author_name":"Hiroaki Baba","raw_affiliation_strings":["Department of Infectious Diseases, Internal Medicine, Tohoku University Graduate School of Medicine, Sendai, Miyagi, Japan; Department of Intelligent Network for Infection Control, Tohoku University Graduate School of Medicine, Sendai, Miyagi,Japan. Electronic address: hbaba48@med.tohoku.ac.jp","Department of Infectious Diseases, Internal Medicine, Tohoku University Graduate School of Medicine, Sendai, Miyagi, Japan","Department of Intelligent Network for Infection Control, Tohoku University Graduate School of Medicine, Sendai, Miyagi,Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Infectious Diseases, Internal Medicine, Tohoku University Graduate School of Medicine, Sendai, Miyagi, Japan; Department of Intelligent Network for Infection Control, Tohoku University Graduate School of Medicine, Sendai, Miyagi,Japan. Electronic address: hbaba48@med.tohoku.ac.jp","institution_ids":["https://openalex.org/I201537933"]},{"raw_affiliation_string":"Department of Infectious Diseases, Internal Medicine, Tohoku University Graduate School of Medicine, Sendai, Miyagi, Japan","institution_ids":["https://openalex.org/I201537933"]},{"raw_affiliation_string":"Department of Intelligent Network for Infection Control, Tohoku University Graduate School of Medicine, Sendai, Miyagi,Japan","institution_ids":["https://openalex.org/I201537933"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5083799909","display_name":"Hajime Kanamori","orcid":"https://orcid.org/0000-0003-3026-5272","observed_orcids":["https://orcid.org/0000-0003-3026-5272"]},"institutions":[{"id":"https://openalex.org/I201537933","display_name":"Tohoku University","ror":"https://ror.org/01dq60k83","country_code":"JP","type":"education","lineage":["https://openalex.org/I201537933"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Hajime Kanamori","raw_affiliation_strings":["Department of Infectious Diseases, Internal Medicine, Tohoku University Graduate School of Medicine, Sendai, Miyagi, Japan; Department of Intelligent Network for Infection Control, Tohoku University Graduate School of Medicine, Sendai, Miyagi,Japan","Department of Infectious Diseases, Internal Medicine, Tohoku University Graduate School of Medicine, Sendai, Miyagi, Japan","Department of Intelligent Network for Infection Control, Tohoku University Graduate School of Medicine, Sendai, Miyagi,Japan"],"raw_orcid":"https://orcid.org/0000-0003-3026-5272","affiliations":[{"raw_affiliation_string":"Department of Infectious Diseases, Internal Medicine, Tohoku University Graduate School of Medicine, Sendai, Miyagi, Japan; Department of Intelligent Network for Infection Control, Tohoku University Graduate School of Medicine, Sendai, Miyagi,Japan","institution_ids":["https://openalex.org/I201537933"]},{"raw_affiliation_string":"Department of Infectious Diseases, Internal Medicine, Tohoku University Graduate School of Medicine, Sendai, Miyagi, Japan","institution_ids":["https://openalex.org/I201537933"]},{"raw_affiliation_string":"Department of Intelligent Network for Infection Control, Tohoku University Graduate School of Medicine, Sendai, Miyagi,Japan","institution_ids":["https://openalex.org/I201537933"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5062741590","display_name":"Risako Kakuta","orcid":"https://orcid.org/0000-0002-4594-908X","observed_orcids":["https://orcid.org/0000-0002-4594-908X"]},"institutions":[{"id":"https://openalex.org/I201537933","display_name":"Tohoku University","ror":"https://ror.org/01dq60k83","country_code":"JP","type":"education","lineage":["https://openalex.org/I201537933"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Risako Kakuta","raw_affiliation_strings":["Department of Otolaryngology-Head and Neck Surgery, Tohoku University Graduate School of Medicine, Sendai, Miyagi, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Otolaryngology-Head and Neck Surgery, Tohoku University Graduate School of Medicine, Sendai, Miyagi, Japan","institution_ids":["https://openalex.org/I201537933"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101846332","display_name":"Hiroki Sakurai","orcid":"https://orcid.org/0000-0002-5555-9253","observed_orcids":["https://orcid.org/0000-0002-5555-9253"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Hiroki Sakurai","raw_affiliation_strings":["Department of Rheumatics and Infectious Disease, Sendai, Miyagi, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Rheumatics and Infectious Disease, Sendai, Miyagi, Japan","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5020946508","display_name":"Kengo Oshima","orcid":"https://orcid.org/0000-0003-4089-4910","observed_orcids":["https://orcid.org/0000-0003-4089-4910"]},"institutions":[{"id":"https://openalex.org/I201537933","display_name":"Tohoku University","ror":"https://ror.org/01dq60k83","country_code":"JP","type":"education","lineage":["https://openalex.org/I201537933"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Kengo Oshima","raw_affiliation_strings":["Department of Infectious Diseases, Internal Medicine, Tohoku University Graduate School of Medicine, Sendai, Miyagi, Japan; Department of Intelligent Network for Infection Control, Tohoku University Graduate School of Medicine, Sendai, Miyagi,Japan","Department of Infectious Diseases, Internal Medicine, Tohoku University Graduate School of Medicine, Sendai, Miyagi, Japan","Department of Intelligent Network for Infection Control, Tohoku University Graduate School of Medicine, Sendai, Miyagi,Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Infectious Diseases, Internal Medicine, Tohoku University Graduate School of Medicine, Sendai, Miyagi, Japan; Department of Intelligent Network for Infection Control, Tohoku University Graduate School of Medicine, Sendai, Miyagi,Japan","institution_ids":["https://openalex.org/I201537933"]},{"raw_affiliation_string":"Department of Infectious Diseases, Internal Medicine, Tohoku University Graduate School of Medicine, Sendai, Miyagi, Japan","institution_ids":["https://openalex.org/I201537933"]},{"raw_affiliation_string":"Department of Intelligent Network for Infection Control, Tohoku University Graduate School of Medicine, Sendai, Miyagi,Japan","institution_ids":["https://openalex.org/I201537933"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5049259561","display_name":"Tetsuji Aoyagi","orcid":"https://orcid.org/0000-0001-6821-9701","observed_orcids":["https://orcid.org/0000-0001-6821-9701"]},"institutions":[{"id":"https://openalex.org/I201537933","display_name":"Tohoku University","ror":"https://ror.org/01dq60k83","country_code":"JP","type":"education","lineage":["https://openalex.org/I201537933"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Tetsuji Aoyagi","raw_affiliation_strings":["Department of Infectious Diseases, Internal Medicine, Tohoku University Graduate School of Medicine, Sendai, Miyagi, Japan; Department of Intelligent Network for Infection Control, Tohoku University Graduate School of Medicine, Sendai, Miyagi,Japan","Department of Infectious Diseases, Internal Medicine, Tohoku University Graduate School of Medicine, Sendai, Miyagi, Japan","Department of Intelligent Network for Infection Control, Tohoku University Graduate School of Medicine, Sendai, Miyagi,Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Infectious Diseases, Internal Medicine, Tohoku University Graduate School of Medicine, Sendai, Miyagi, Japan; Department of Intelligent Network for Infection Control, Tohoku University Graduate School of Medicine, Sendai, Miyagi,Japan","institution_ids":["https://openalex.org/I201537933"]},{"raw_affiliation_string":"Department of Infectious Diseases, Internal Medicine, Tohoku University Graduate School of Medicine, Sendai, Miyagi, Japan","institution_ids":["https://openalex.org/I201537933"]},{"raw_affiliation_string":"Department of Intelligent Network for Infection Control, Tohoku University Graduate School of Medicine, Sendai, Miyagi,Japan","institution_ids":["https://openalex.org/I201537933"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5040832259","display_name":"Mitsuo Kaku","orcid":"https://orcid.org/0000-0002-3714-8100","observed_orcids":["https://orcid.org/0000-0002-3714-8100"]},"institutions":[{"id":"https://openalex.org/I201537933","display_name":"Tohoku University","ror":"https://ror.org/01dq60k83","country_code":"JP","type":"education","lineage":["https://openalex.org/I201537933"]},{"id":"https://openalex.org/I85324120","display_name":"Tohoku Medical and Pharmaceutical University","ror":"https://ror.org/0264zxa45","country_code":"JP","type":"education","lineage":["https://openalex.org/I85324120"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Mitsuo Kaku","raw_affiliation_strings":["Department of Infectious Diseases, Internal Medicine, Tohoku University Graduate School of Medicine, Sendai, Miyagi, Japan; Department of Intelligent Network for Infection Control, Tohoku University Graduate School of Medicine, Sendai, Miyagi,Japan; Department of infection control and prevention, Tohoku Medical Pharmaceutical University, Sendai, Miyagi, Japan","Department of Infectious Diseases, Internal Medicine, Tohoku University Graduate School of Medicine, Sendai, Miyagi, Japan","Department of Intelligent Network for Infection Control, Tohoku University Graduate School of Medicine, Sendai, Miyagi,Japan","Department of infection control and prevention, Tohoku Medical Pharmaceutical University, Sendai, Miyagi, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Infectious Diseases, Internal Medicine, Tohoku University Graduate School of Medicine, Sendai, Miyagi, Japan; Department of Intelligent Network for Infection Control, Tohoku University Graduate School of Medicine, Sendai, Miyagi,Japan; Department of infection control and prevention, Tohoku Medical Pharmaceutical University, Sendai, Miyagi, Japan","institution_ids":["https://openalex.org/I201537933","https://openalex.org/I85324120"]},{"raw_affiliation_string":"Department of Infectious Diseases, Internal Medicine, Tohoku University Graduate School of Medicine, Sendai, Miyagi, Japan","institution_ids":["https://openalex.org/I201537933"]},{"raw_affiliation_string":"Department of Intelligent Network for Infection Control, Tohoku University Graduate School of Medicine, Sendai, Miyagi,Japan","institution_ids":["https://openalex.org/I201537933"]},{"raw_affiliation_string":"Department of infection control and prevention, Tohoku Medical Pharmaceutical University, Sendai, Miyagi, Japan","institution_ids":["https://openalex.org/I85324120"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5072085018"],"corresponding_institution_ids":["https://openalex.org/I201537933"],"apc_list":{"value":2800,"currency":"USD","value_usd":2800},"apc_paid":null,"fwci":0.4,"has_fulltext":false,"cited_by_count":10,"citation_normalized_percentile":{"value":0.60217289,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":87,"max":98},"biblio":{"volume":"99","issue":"3","first_page":"115233","last_page":"115233"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10900","display_name":"Listeria monocytogenes in Food Safety","score":0.9911999702453613,"subfield":{"id":"https://openalex.org/subfields/1106","display_name":"Food Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10900","display_name":"Listeria monocytogenes in Food Safety","score":0.9911999702453613,"subfield":{"id":"https://openalex.org/subfields/1106","display_name":"Food Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12824","display_name":"Infections and bacterial resistance","score":0.0013000000035390258,"subfield":{"id":"https://openalex.org/subfields/2726","display_name":"Microbiology (medical)"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10486","display_name":"Salmonella and Campylobacter epidemiology","score":0.0008999999845400453,"subfield":{"id":"https://openalex.org/subfields/1106","display_name":"Food Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/listeria-monocytogenes","display_name":"Listeria monocytogenes","score":1.0},{"id":"https://openalex.org/keywords/invasive-listeriosis","display_name":"invasive listeriosis","score":0.9959999918937683},{"id":"https://openalex.org/keywords/molecular-epidemiology","display_name":"molecular epidemiology","score":0.703000009059906},{"id":"https://openalex.org/keywords/genome-analysis","display_name":"genome analysis","score":0.5410000085830688}],"concepts":[{"id":"https://openalex.org/C2781350384","wikidata":"https://www.wikidata.org/wiki/Q292015","display_name":"Listeria monocytogenes","level":3,"score":0.9730349779129028},{"id":"https://openalex.org/C2778682378","wikidata":"https://www.wikidata.org/wiki/Q746209","display_name":"Listeria","level":4,"score":0.6776390075683594},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.5666380524635315},{"id":"https://openalex.org/C89423630","wikidata":"https://www.wikidata.org/wiki/Q7193","display_name":"Microbiology","level":1,"score":0.4936023950576782},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.32153284549713135},{"id":"https://openalex.org/C523546767","wikidata":"https://www.wikidata.org/wiki/Q10876","display_name":"Bacteria","level":2,"score":0.27694082260131836}],"mesh":[{"descriptor_ui":"D000073336","descriptor_name":"Whole Genome Sequencing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000328","descriptor_name":"Adult","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000367","descriptor_name":"Age Factors","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000368","descriptor_name":"Aged","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000369","descriptor_name":"Aged, 80 and over","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001426","descriptor_name":"Bacterial Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D005260","descriptor_name":"Female","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007223","descriptor_name":"Infant","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007564","descriptor_name":"Japan","qualifier_ui":"Q000453","qualifier_name":"epidemiology","is_major_topic":false},{"descriptor_ui":"D008088","descriptor_name":"Listeriosis","qualifier_ui":"Q000097","qualifier_name":"blood","is_major_topic":false},{"descriptor_ui":"D008088","descriptor_name":"Listeriosis","qualifier_ui":"Q000453","qualifier_name":"epidemiology","is_major_topic":true},{"descriptor_ui":"D008088","descriptor_name":"Listeriosis","qualifier_ui":"Q000635","qualifier_name":"transmission","is_major_topic":false},{"descriptor_ui":"D008089","descriptor_name":"Listeria monocytogenes","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D008089","descriptor_name":"Listeria monocytogenes","qualifier_ui":"Q000472","qualifier_name":"pathogenicity","is_major_topic":true},{"descriptor_ui":"D008297","descriptor_name":"Male","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016680","descriptor_name":"Genome, Bacterial","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D037521","descriptor_name":"Virulence Factors","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true}],"locations_count":2,"locations":[{"id":"doi:10.1016/j.diagmicrobio.2020.115233","doi":"https://doi.org/10.1016/j.diagmicrobio.2020.115233","is_oa":false,"landing_page_url":"https://doi.org/10.1016/j.diagmicrobio.2020.115233","pdf_url":null,"source":{"id":"https://openalex.org/S80485324","display_name":"Diagnostic Microbiology and Infectious Disease","issn_l":"0732-8893","issn":["0732-8893","1879-0070"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["cwts-core","dongbi-d","doyens","jufo-1","ki-jl-1","medline","norway-1","poland-70","russia-white-list-2","vabb-shw"],"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Diagnostic Microbiology and Infectious Disease","raw_type":"journal-article"},{"id":"pmid:33340935","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/33340935","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Diagnostic microbiology and infectious disease","raw_type":"Journal Article"}],"best_oa_location":null,"sustainable_development_goals":[{"display_name":"Good health and well-being","id":"https://metadata.un.org/sdg/3","score":0.9537000060081482}],"study_designs":[{"display_name":"Observational Study","id":"https://openalex.org/study-designs/observational-study"}],"awards":[],"funders":[{"id":"https://openalex.org/F4320323533","display_name":"Hokkaido University","ror":"https://ror.org/02e16g702"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":10,"referenced_works":["https://openalex.org/W1806778326","https://openalex.org/W2054709656","https://openalex.org/W2143687304","https://openalex.org/W2157829009","https://openalex.org/W2259709515","https://openalex.org/W2416609613","https://openalex.org/W2530546106","https://openalex.org/W2943263871","https://openalex.org/W2964942421","https://openalex.org/W2979143665"],"related_works":["https://openalex.org/W4412555146","https://openalex.org/W2325835412","https://openalex.org/W4311525605","https://openalex.org/W2406696268","https://openalex.org/W4407635267","https://openalex.org/W1965428059","https://openalex.org/W4391337671","https://openalex.org/W4391337744","https://openalex.org/W4389030106","https://openalex.org/W2107894161"],"abstract_inverted_index":null,"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":5},{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":1}],"updated_date":"2026-11-04T10:54:05.112534","created_date":"2020-10-15T00:00:00"}
