{"id":"https://openalex.org/W3048895009","doi":"https://doi.org/10.1186/s40794-020-00114-2","title":"Panspecies molecular assays detect viral pathogens missed by real-time PCR/reverse-transcriptase PCR among pneumonia patients, Sarawak, Malaysia","display_name":"Panspecies molecular assays detect viral pathogens missed by real-time PCR/reverse-transcriptase PCR among pneumonia patients, Sarawak, Malaysia","publication_year":2020,"publication_date":"2020-08-12","ids":{"openalex":"https://openalex.org/W3048895009","doi":"https://doi.org/10.1186/s40794-020-00114-2","mag":"3048895009","pmid":"https://pubmed.ncbi.nlm.nih.gov/32817802","pmcid":"https://www.ncbi.nlm.nih.gov/pmc/articles/7422451"},"language":"en","primary_location":{"id":"doi:10.1186/s40794-020-00114-2","doi":"https://doi.org/10.1186/s40794-020-00114-2","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s40794-020-00114-2","pdf_url":"https://tdtmvjournal.biomedcentral.com/track/pdf/10.1186/s40794-020-00114-2","source":{"id":"https://openalex.org/S4210218939","display_name":"Tropical Diseases Travel Medicine and Vaccines","issn_l":"2055-0936","issn":["2055-0936"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["cwts-core","doaj","dongbi-d","ki-jl-1","norway-1","oarl","poland-70","russia-white-list-1"],"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Tropical Diseases, Travel Medicine and Vaccines","raw_type":"journal-article"},"volume":null,"type":"article","is_traditional":true,"indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://tdtmvjournal.biomedcentral.com/track/pdf/10.1186/s40794-020-00114-2","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5034157045","display_name":"Jane K. Fieldhouse","orcid":"https://orcid.org/0000-0002-5450-0970","observed_orcids":["https://orcid.org/0000-0002-5450-0970"]},"institutions":[{"id":"https://openalex.org/I170897317","display_name":"Duke University","ror":"https://ror.org/00py81415","country_code":"US","type":"education","lineage":["https://openalex.org/I170897317"]},{"id":"https://openalex.org/I180670191","display_name":"University of California, San Francisco","ror":"https://ror.org/043mz5j54","country_code":"US","type":"education","lineage":["https://openalex.org/I180670191"]},{"id":"https://openalex.org/I4210126298","display_name":"Duke Medical Center","ror":"https://ror.org/03njmea73","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I4210126298","https://openalex.org/I4210144876"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jane K. Fieldhouse","raw_affiliation_strings":["Division of Infectious Diseases, Duke University School of Medicine, DUMC Box 102359, Durham, NC, 27710, USA","Duke Global Health Institute, Duke University, Durham, North Carolina USA","Institute for Global Health Sciences, University of California, San Francisco, California USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Division of Infectious Diseases, Duke University School of Medicine, DUMC Box 102359, Durham, NC, 27710, USA","institution_ids":["https://openalex.org/I170897317","https://openalex.org/I4210126298"]},{"raw_affiliation_string":"Duke Global Health Institute, Duke University, Durham, North Carolina USA","institution_ids":["https://openalex.org/I170897317"]},{"raw_affiliation_string":"Institute for Global Health Sciences, University of California, San Francisco, California USA","institution_ids":["https://openalex.org/I180670191"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5064704692","display_name":"Emily S. Bailey","orcid":"https://orcid.org/0000-0003-1292-0771","observed_orcids":["https://orcid.org/0000-0003-1292-0771"]},"institutions":[{"id":"https://openalex.org/I170897317","display_name":"Duke University","ror":"https://ror.org/00py81415","country_code":"US","type":"education","lineage":["https://openalex.org/I170897317"]},{"id":"https://openalex.org/I4210126298","display_name":"Duke Medical Center","ror":"https://ror.org/03njmea73","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I4210126298","https://openalex.org/I4210144876"]},{"id":"https://openalex.org/I926076166","display_name":"Texas Tech University Health Sciences Center","ror":"https://ror.org/033ztpr93","country_code":"US","type":"education","lineage":["https://openalex.org/I926076166"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Emily S. Bailey","raw_affiliation_strings":["Department of Public Health, Texas Tech University Health Sciences Center, Abilene, TX USA","Division of Infectious Diseases, Duke University School of Medicine, DUMC Box 102359, Durham, NC, 27710, USA","Duke Global Health Institute, Duke University, Durham, North Carolina USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Public Health, Texas Tech University Health Sciences Center, Abilene, TX USA","institution_ids":["https://openalex.org/I926076166"]},{"raw_affiliation_string":"Division of Infectious Diseases, Duke University School of Medicine, DUMC Box 102359, Durham, NC, 27710, USA","institution_ids":["https://openalex.org/I170897317","https://openalex.org/I4210126298"]},{"raw_affiliation_string":"Duke Global Health Institute, Duke University, Durham, North Carolina USA","institution_ids":["https://openalex.org/I170897317"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5029687549","display_name":"Teck\u2010Hock Toh","orcid":"https://orcid.org/0000-0001-5909-4855","observed_orcids":["https://orcid.org/0000-0001-5909-4855"]},"institutions":[{"id":"https://openalex.org/I105292261","display_name":"Ministry of Health","ror":"https://ror.org/05ddxe180","country_code":"MY","type":"government","lineage":["https://openalex.org/I105292261"]},{"id":"https://openalex.org/I2800513542","display_name":"Sibu Hospital","ror":"https://ror.org/01w86pt71","country_code":"MY","type":"healthcare","lineage":["https://openalex.org/I2800513542"]},{"id":"https://openalex.org/I902764099","display_name":"SEGi University","ror":"https://ror.org/05crr5s63","country_code":"MY","type":"education","lineage":["https://openalex.org/I902764099"]}],"countries":["MY"],"is_corresponding":false,"raw_author_name":"Teck-Hock Toh","raw_affiliation_strings":["Clinical Research Center, Sibu Hospital, Ministry of Health Malaysia, Sibu, Sarawak, Malaysia","Department of Paediatrics, Sibu Hospital, Ministry of Health Malaysia, Sibu, Sarawak Malaysia","Faculty of Medicine, SEGi University, Kota Damansara, Selangor Malaysia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Clinical Research Center, Sibu Hospital, Ministry of Health Malaysia, Sibu, Sarawak, Malaysia","institution_ids":["https://openalex.org/I105292261","https://openalex.org/I2800513542"]},{"raw_affiliation_string":"Department of Paediatrics, Sibu Hospital, Ministry of Health Malaysia, Sibu, Sarawak Malaysia","institution_ids":["https://openalex.org/I105292261","https://openalex.org/I2800513542"]},{"raw_affiliation_string":"Faculty of Medicine, SEGi University, Kota Damansara, Selangor Malaysia","institution_ids":["https://openalex.org/I902764099"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5020396406","display_name":"King-Ching Hii","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I105292261","display_name":"Ministry of Health","ror":"https://ror.org/05ddxe180","country_code":"MY","type":"government","lineage":["https://openalex.org/I105292261"]}],"countries":["MY"],"is_corresponding":false,"raw_author_name":"King-Ching Hii","raw_affiliation_strings":["Kapit Hospital, Ministry of Health Malaysia, Kapit, Sarawak, Malaysia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Kapit Hospital, Ministry of Health Malaysia, Kapit, Sarawak, Malaysia","institution_ids":["https://openalex.org/I105292261"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5006774255","display_name":"Kerry A. Mallinson","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I170897317","display_name":"Duke University","ror":"https://ror.org/00py81415","country_code":"US","type":"education","lineage":["https://openalex.org/I170897317"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Kerry A. Mallinson","raw_affiliation_strings":["Duke Global Health Institute, Duke University, Durham, North Carolina, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Duke Global Health Institute, Duke University, Durham, North Carolina, USA","institution_ids":["https://openalex.org/I170897317"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5086796695","display_name":"Jakie Ting","orcid":"https://orcid.org/0000-0001-8420-0162","observed_orcids":["https://orcid.org/0000-0001-8420-0162"]},"institutions":[{"id":"https://openalex.org/I105292261","display_name":"Ministry of Health","ror":"https://ror.org/05ddxe180","country_code":"MY","type":"government","lineage":["https://openalex.org/I105292261"]},{"id":"https://openalex.org/I2800513542","display_name":"Sibu Hospital","ror":"https://ror.org/01w86pt71","country_code":"MY","type":"healthcare","lineage":["https://openalex.org/I2800513542"]},{"id":"https://openalex.org/I902764099","display_name":"SEGi University","ror":"https://ror.org/05crr5s63","country_code":"MY","type":"education","lineage":["https://openalex.org/I902764099"]}],"countries":["MY"],"is_corresponding":false,"raw_author_name":"Jakie Ting","raw_affiliation_strings":["Clinical Research Center, Sibu Hospital, Ministry of Health Malaysia, Sibu, Sarawak, Malaysia","Faculty of Medicine, SEGi University, Kota Damansara, Selangor Malaysia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Clinical Research Center, Sibu Hospital, Ministry of Health Malaysia, Sibu, Sarawak, Malaysia","institution_ids":["https://openalex.org/I105292261","https://openalex.org/I2800513542"]},{"raw_affiliation_string":"Faculty of Medicine, SEGi University, Kota Damansara, Selangor Malaysia","institution_ids":["https://openalex.org/I902764099"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5006150039","display_name":"John A. Lednicky","orcid":"https://orcid.org/0000-0003-4069-0539","observed_orcids":["https://orcid.org/0000-0003-4069-0539"]},"institutions":[{"id":"https://openalex.org/I33213144","display_name":"University of Florida","ror":"https://ror.org/02y3ad647","country_code":"US","type":"education","lineage":["https://openalex.org/I33213144"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"John A. Lednicky","raw_affiliation_strings":["Department of Environmental and Global Health, University of Florida, Gainesville, Florida, USA","Emerging Pathogens Institute, University of Florida, Gainesville, Florida USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Environmental and Global Health, University of Florida, Gainesville, Florida, USA","institution_ids":["https://openalex.org/I33213144"]},{"raw_affiliation_string":"Emerging Pathogens Institute, University of Florida, Gainesville, Florida USA","institution_ids":["https://openalex.org/I33213144"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5077552487","display_name":"Antoinette Berita","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I105292261","display_name":"Ministry of Health","ror":"https://ror.org/05ddxe180","country_code":"MY","type":"government","lineage":["https://openalex.org/I105292261"]}],"countries":["MY"],"is_corresponding":false,"raw_author_name":"Antoinette Berita","raw_affiliation_strings":["Kapit Hospital, Ministry of Health Malaysia, Kapit, Sarawak, Malaysia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Kapit Hospital, Ministry of Health Malaysia, Kapit, Sarawak, Malaysia","institution_ids":["https://openalex.org/I105292261"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101418911","display_name":"Tham Thi Hong Nguyen","orcid":"https://orcid.org/0000-0002-9990-6093","observed_orcids":["https://orcid.org/0000-0002-9990-6093"]},"institutions":[{"id":"https://openalex.org/I4210126319","display_name":"Duke-NUS Medical School","ror":"https://ror.org/02j1m6098","country_code":"SG","type":"education","lineage":["https://openalex.org/I165932596","https://openalex.org/I170897317","https://openalex.org/I4210126319"]}],"countries":["SG"],"is_corresponding":false,"raw_author_name":"Tham Thi Nguyen","raw_affiliation_strings":["Emerging Infectious Disease Program, Duke-NUS Medical School, Singapore, Singapore"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Emerging Infectious Disease Program, Duke-NUS Medical School, Singapore, Singapore","institution_ids":["https://openalex.org/I4210126319"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5067271833","display_name":"Diego Gal\u00e1n","orcid":"https://orcid.org/0000-0002-1517-1107","observed_orcids":["https://orcid.org/0000-0002-1517-1107"]},"institutions":[{"id":"https://openalex.org/I170897317","display_name":"Duke University","ror":"https://ror.org/00py81415","country_code":"US","type":"education","lineage":["https://openalex.org/I170897317"]},{"id":"https://openalex.org/I4210126298","display_name":"Duke Medical Center","ror":"https://ror.org/03njmea73","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I4210126298","https://openalex.org/I4210144876"]},{"id":"https://openalex.org/I4210126319","display_name":"Duke-NUS Medical School","ror":"https://ror.org/02j1m6098","country_code":"SG","type":"education","lineage":["https://openalex.org/I165932596","https://openalex.org/I170897317","https://openalex.org/I4210126319"]}],"countries":["SG","US"],"is_corresponding":false,"raw_author_name":"Diego Galan","raw_affiliation_strings":["Division of Infectious Diseases, Duke University School of Medicine, DUMC Box 102359, Durham, NC, 27710, USA","Emerging Infectious Disease Program, Duke-NUS Medical School, Singapore, Singapore"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Division of Infectious Diseases, Duke University School of Medicine, DUMC Box 102359, Durham, NC, 27710, USA","institution_ids":["https://openalex.org/I170897317","https://openalex.org/I4210126298"]},{"raw_affiliation_string":"Emerging Infectious Disease Program, Duke-NUS Medical School, Singapore, Singapore","institution_ids":["https://openalex.org/I4210126319"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5071360816","display_name":"Son T. Than","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I4210126319","display_name":"Duke-NUS Medical School","ror":"https://ror.org/02j1m6098","country_code":"SG","type":"education","lineage":["https://openalex.org/I165932596","https://openalex.org/I170897317","https://openalex.org/I4210126319"]}],"countries":["SG"],"is_corresponding":false,"raw_author_name":"Son T. Than","raw_affiliation_strings":["Emerging Infectious Disease Program, Duke-NUS Medical School, Singapore, Singapore"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Emerging Infectious Disease Program, Duke-NUS Medical School, Singapore, Singapore","institution_ids":["https://openalex.org/I4210126319"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5108675119","display_name":"See Chang Wong","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I105292261","display_name":"Ministry of Health","ror":"https://ror.org/05ddxe180","country_code":"MY","type":"government","lineage":["https://openalex.org/I105292261"]},{"id":"https://openalex.org/I2800513542","display_name":"Sibu Hospital","ror":"https://ror.org/01w86pt71","country_code":"MY","type":"healthcare","lineage":["https://openalex.org/I2800513542"]},{"id":"https://openalex.org/I902764099","display_name":"SEGi University","ror":"https://ror.org/05crr5s63","country_code":"MY","type":"education","lineage":["https://openalex.org/I902764099"]}],"countries":["MY"],"is_corresponding":false,"raw_author_name":"See-Chang Wong","raw_affiliation_strings":["Department of Paediatrics, Sibu Hospital, Ministry of Health Malaysia, Sibu, Sarawak Malaysia","Faculty of Medicine, SEGi University, Kota Damansara, Selangor, Malaysia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Paediatrics, Sibu Hospital, Ministry of Health Malaysia, Sibu, Sarawak Malaysia","institution_ids":["https://openalex.org/I105292261","https://openalex.org/I2800513542"]},{"raw_affiliation_string":"Faculty of Medicine, SEGi University, Kota Damansara, Selangor, Malaysia","institution_ids":["https://openalex.org/I902764099"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5091025928","display_name":"Toh-Mee Wong","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I105292261","display_name":"Ministry of Health","ror":"https://ror.org/05ddxe180","country_code":"MY","type":"government","lineage":["https://openalex.org/I105292261"]},{"id":"https://openalex.org/I2800513542","display_name":"Sibu Hospital","ror":"https://ror.org/01w86pt71","country_code":"MY","type":"healthcare","lineage":["https://openalex.org/I2800513542"]},{"id":"https://openalex.org/I902764099","display_name":"SEGi University","ror":"https://ror.org/05crr5s63","country_code":"MY","type":"education","lineage":["https://openalex.org/I902764099"]}],"countries":["MY"],"is_corresponding":false,"raw_author_name":"Toh-Mee Wong","raw_affiliation_strings":["Clinical Research Center, Sibu Hospital, Ministry of Health Malaysia, Sibu, Sarawak, Malaysia","Department of Medicine, Sibu Hospital, Ministry of Health Malaysia, Sibu, Sarawak Malaysia","Faculty of Medicine, SEGi University, Kota Damansara, Selangor Malaysia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Clinical Research Center, Sibu Hospital, Ministry of Health Malaysia, Sibu, Sarawak, Malaysia","institution_ids":["https://openalex.org/I105292261","https://openalex.org/I2800513542"]},{"raw_affiliation_string":"Department of Medicine, Sibu Hospital, Ministry of Health Malaysia, Sibu, Sarawak Malaysia","institution_ids":["https://openalex.org/I105292261","https://openalex.org/I2800513542"]},{"raw_affiliation_string":"Faculty of Medicine, SEGi University, Kota Damansara, Selangor Malaysia","institution_ids":["https://openalex.org/I902764099"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5111992423","display_name":"Patrick J. Blair","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I1312537475","display_name":"Naval Medical Research Command","ror":"https://ror.org/05f421b09","country_code":"US","type":"facility","lineage":["https://openalex.org/I1312537475","https://openalex.org/I1330347796","https://openalex.org/I3130687028","https://openalex.org/I4391768141"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Patrick J. Blair","raw_affiliation_strings":["Naval Medical Research Center-Asia, Singapore, Singapore"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Naval Medical Research Center-Asia, Singapore, Singapore","institution_ids":["https://openalex.org/I1312537475"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5080287031","display_name":"Gregory Charles Gray","orcid":"https://orcid.org/0000-0002-4628-5908","observed_orcids":["https://orcid.org/0000-0002-4628-5908","https://orcid.org/0000-0001-7384-6160"]},"institutions":[{"id":"https://openalex.org/I170897317","display_name":"Duke University","ror":"https://ror.org/00py81415","country_code":"US","type":"education","lineage":["https://openalex.org/I170897317"]},{"id":"https://openalex.org/I4210126298","display_name":"Duke Medical Center","ror":"https://ror.org/03njmea73","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I4210126298","https://openalex.org/I4210144876"]},{"id":"https://openalex.org/I4210126319","display_name":"Duke-NUS Medical School","ror":"https://ror.org/02j1m6098","country_code":"SG","type":"education","lineage":["https://openalex.org/I165932596","https://openalex.org/I170897317","https://openalex.org/I4210126319"]},{"id":"https://openalex.org/I4210159968","display_name":"Duke Kunshan University","ror":"https://ror.org/04sr5ys16","country_code":"CN","type":"education","lineage":["https://openalex.org/I170897317","https://openalex.org/I37461747","https://openalex.org/I4210159968"]}],"countries":["CN","SG","US"],"is_corresponding":true,"raw_author_name":"Gregory C. Gray","raw_affiliation_strings":["Division of Infectious Diseases, Duke University School of Medicine, DUMC Box 102359, Durham, NC 27710 USA","Duke Global Health Institute, Duke University, Durham, North Carolina, USA","Emerging Infectious Disease Program, Duke-NUS Medical School, Singapore, Singapore","Global Health Center, Duke Kunshan University, Kunshan, China"],"raw_orcid":"https://orcid.org/0000-0002-4628-5908","affiliations":[{"raw_affiliation_string":"Division of Infectious Diseases, Duke University School of Medicine, DUMC Box 102359, Durham, NC 27710 USA","institution_ids":["https://openalex.org/I170897317","https://openalex.org/I4210126298"]},{"raw_affiliation_string":"Duke Global Health Institute, Duke University, Durham, North Carolina, USA","institution_ids":["https://openalex.org/I170897317"]},{"raw_affiliation_string":"Emerging Infectious Disease Program, Duke-NUS Medical School, Singapore, Singapore","institution_ids":["https://openalex.org/I4210126319"]},{"raw_affiliation_string":"Global Health Center, Duke Kunshan University, Kunshan, China","institution_ids":["https://openalex.org/I4210159968"]}]}],"institutions":[],"countries_distinct_count":4,"institutions_distinct_count":11,"corresponding_author_ids":["https://openalex.org/A5080287031"],"corresponding_institution_ids":["https://openalex.org/I170897317","https://openalex.org/I4210126298","https://openalex.org/I4210126319","https://openalex.org/I4210159968"],"apc_list":{"value":2290,"currency":"USD","value_usd":2290},"apc_paid":{"value":2290,"currency":"USD","value_usd":2290},"fwci":1.0534,"has_fulltext":true,"cited_by_count":12,"citation_normalized_percentile":{"value":0.75687268,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":88,"max":97},"biblio":{"volume":"6","issue":"1","first_page":"13","last_page":"13"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11243","display_name":"Respiratory viral infections research","score":0.9282000064849854,"subfield":{"id":"https://openalex.org/subfields/2713","display_name":"Epidemiology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T11243","display_name":"Respiratory viral infections research","score":0.9282000064849854,"subfield":{"id":"https://openalex.org/subfields/2713","display_name":"Epidemiology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10654","display_name":"Pneumonia and Respiratory Infections","score":0.056699998676776886,"subfield":{"id":"https://openalex.org/subfields/2713","display_name":"Epidemiology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T12167","display_name":"Bacterial Identification and Susceptibility Testing","score":0.0027000000700354576,"subfield":{"id":"https://openalex.org/subfields/2726","display_name":"Microbiology (medical)"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/pneumonia-etiology","display_name":"pneumonia etiology","score":0.8569999933242798},{"id":"https://openalex.org/keywords/respiratory-viruses","display_name":"respiratory viruses","score":0.5910000205039978},{"id":"https://openalex.org/keywords/adenovirus","display_name":"adenovirus","score":0.7710000276565552},{"id":"https://openalex.org/keywords/enterovirus","display_name":"enterovirus","score":0.9769999980926514},{"id":"https://openalex.org/keywords/coronavirus","display_name":"coronavirus","score":0.9959999918937683},{"id":"https://openalex.org/keywords/novel-virus","display_name":"novel virus","score":0.6840000152587891},{"id":"https://openalex.org/keywords/assay-sensitivity","display_name":"assay sensitivity","score":0.6890000104904175},{"id":"https://openalex.org/keywords/real-time-pcr","display_name":"real-time PCR","score":0.6449999809265137},{"id":"https://openalex.org/keywords/nested-pcr","display_name":"nested PCR","score":0.6359999775886536},{"id":"https://openalex.org/keywords/lower-respiratory-tract-infection","display_name":"lower respiratory tract infection","score":0.7170000076293945},{"id":"https://openalex.org/keywords/sarawak","display_name":"Sarawak","score":0.8100000023841858}],"concepts":[{"id":"https://openalex.org/C159047783","wikidata":"https://www.wikidata.org/wiki/Q7215","display_name":"Virology","level":1,"score":0.7429145574569702},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.635143518447876},{"id":"https://openalex.org/C156719811","wikidata":"https://www.wikidata.org/wiki/Q28774","display_name":"Reverse transcriptase","level":4,"score":0.6117990016937256},{"id":"https://openalex.org/C48023723","wikidata":"https://www.wikidata.org/wiki/Q856198","display_name":"Real-time polymerase chain reaction","level":3,"score":0.607853889465332},{"id":"https://openalex.org/C4692481","wikidata":"https://www.wikidata.org/wiki/Q169526","display_name":"Reverse transcription polymerase chain reaction","level":4,"score":0.5717329382896423},{"id":"https://openalex.org/C49105822","wikidata":"https://www.wikidata.org/wiki/Q176996","display_name":"Polymerase chain reaction","level":3,"score":0.5475358963012695},{"id":"https://openalex.org/C2522874641","wikidata":"https://www.wikidata.org/wiki/Q808","display_name":"Virus","level":2,"score":0.44139716029167175},{"id":"https://openalex.org/C2777914695","wikidata":"https://www.wikidata.org/wiki/Q12192","display_name":"Pneumonia","level":2,"score":0.4203588366508484},{"id":"https://openalex.org/C153911025","wikidata":"https://www.wikidata.org/wiki/Q7202","display_name":"Molecular biology","level":1,"score":0.3499886393547058},{"id":"https://openalex.org/C89423630","wikidata":"https://www.wikidata.org/wiki/Q7193","display_name":"Microbiology","level":1,"score":0.3295845091342926},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.2745177149772644},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.23658204078674316},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.10660988092422485},{"id":"https://openalex.org/C105580179","wikidata":"https://www.wikidata.org/wiki/Q188928","display_name":"Messenger RNA","level":3,"score":0.10113507509231567},{"id":"https://openalex.org/C126322002","wikidata":"https://www.wikidata.org/wiki/Q11180","display_name":"Internal medicine","level":1,"score":0.0}],"mesh":[],"locations_count":5,"locations":[{"id":"doi:10.1186/s40794-020-00114-2","doi":"https://doi.org/10.1186/s40794-020-00114-2","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s40794-020-00114-2","pdf_url":"https://tdtmvjournal.biomedcentral.com/track/pdf/10.1186/s40794-020-00114-2","source":{"id":"https://openalex.org/S4210218939","display_name":"Tropical Diseases Travel Medicine and Vaccines","issn_l":"2055-0936","issn":["2055-0936"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["cwts-core","doaj","dongbi-d","ki-jl-1","norway-1","oarl","poland-70","russia-white-list-1"],"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Tropical Diseases, Travel Medicine and Vaccines","raw_type":"journal-article"},{"id":"pmh:oai:pubmedcentral.nih.gov:7422451","doi":null,"is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/7422451","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Trop Dis Travel Med Vaccines","raw_type":"Text"},{"id":"pmid:32817802","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/32817802","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Tropical diseases, travel medicine and vaccines","raw_type":"Journal Article"},{"id":"pmh:oai:doaj.org/article:8654e22a628240cbb2102bc8065dc160","doi":null,"is_oa":true,"landing_page_url":"https://doaj.org/article/8654e22a628240cbb2102bc8065dc160","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Tropical Diseases, Travel Medicine and Vaccines, Vol 6, Iss 1, Pp 1-8 (2020)","raw_type":"article"},{"id":"pmh:oai:zenodo.org:4066127","doi":null,"is_oa":true,"landing_page_url":"https://zenodo.org/record/4066127","pdf_url":null,"source":{"id":"https://openalex.org/S4306400562","display_name":"Zenodo (CERN European Organization for Nuclear Research)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I67311998","host_organization_name":"European Organization for Nuclear Research","host_organization_lineage":["https://openalex.org/I67311998"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Tropical Diseases, Travel Medicine and Vaccines Volume 6 (2020)","raw_type":"info:eu-repo/semantics/article"}],"best_oa_location":{"id":"doi:10.1186/s40794-020-00114-2","doi":"https://doi.org/10.1186/s40794-020-00114-2","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s40794-020-00114-2","pdf_url":"https://tdtmvjournal.biomedcentral.com/track/pdf/10.1186/s40794-020-00114-2","source":{"id":"https://openalex.org/S4210218939","display_name":"Tropical Diseases Travel Medicine and Vaccines","issn_l":"2055-0936","issn":["2055-0936"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["cwts-core","doaj","dongbi-d","ki-jl-1","norway-1","oarl","poland-70","russia-white-list-1"],"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Tropical Diseases, Travel Medicine and Vaccines","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.8999999761581421,"display_name":"Good health and well-being","id":"https://metadata.un.org/sdg/3"}],"study_designs":[{"display_name":"Observational Study","id":"https://openalex.org/study-designs/observational-study"}],"awards":[{"id":"https://openalex.org/G3155651632","display_name":null,"funder_award_id":"SC-2016-SABER-003-002","funder_id":"https://openalex.org/F4320338500","funder_display_name":"Naval Medical Research Center\u2014Asia"},{"id":"https://openalex.org/G5232890010","display_name":null,"funder_award_id":"SC-2017-SABER-010-001","funder_id":"https://openalex.org/F4320338500","funder_display_name":"Naval Medical Research Center\u2014Asia"}],"funders":[{"id":"https://openalex.org/F4320332424","display_name":"Duke Global Health Institute, Duke University","ror":"https://ror.org/00py81415"},{"id":"https://openalex.org/F4320338301","display_name":"Naval Medical Research Center","ror":"https://ror.org/05f421b09"},{"id":"https://openalex.org/F4320338500","display_name":"Naval Medical Research Center\u2014Asia","ror":null}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W3048895009.pdf","grobid_xml":"https://content.openalex.org/works/W3048895009.grobid-xml"},"referenced_works_count":22,"referenced_works":["https://openalex.org/W73879870","https://openalex.org/W1519428799","https://openalex.org/W1593955729","https://openalex.org/W2000714505","https://openalex.org/W2006805630","https://openalex.org/W2034629930","https://openalex.org/W2059359937","https://openalex.org/W2107182480","https://openalex.org/W2125904048","https://openalex.org/W2135241378","https://openalex.org/W2169391021","https://openalex.org/W2412780238","https://openalex.org/W2471207379","https://openalex.org/W2506683719","https://openalex.org/W2796950091","https://openalex.org/W2889562406","https://openalex.org/W2891117831","https://openalex.org/W2894101213","https://openalex.org/W2914307637","https://openalex.org/W2990203560","https://openalex.org/W2994763327","https://openalex.org/W4239909494"],"related_works":["https://openalex.org/W6976879549","https://openalex.org/W2950549707","https://openalex.org/W2130294285","https://openalex.org/W2146053771","https://openalex.org/W2067994226","https://openalex.org/W2606625901","https://openalex.org/W2167019694","https://openalex.org/W1601616737","https://openalex.org/W2124242973","https://openalex.org/W7211992948"],"abstract_inverted_index":{"BACKGROUND:":[0],"In":[1],"a":[2,129,139,149,169,238],"year-long":[3],"pneumonia":[4],"etiology":[5],"study":[6,48],"conducted":[7],"June":[8],"2017":[9],"to":[10,36,38,51,61,197,210],"May":[11],"2018":[12],"in":[13,201,229],"Sarawak,":[14],"Malaysia,":[15],"599":[16],"patients'":[17],"nasopharyngeal":[18],"swab":[19],"specimens":[20,95,163],"were":[21,74,100,194,223],"studied":[22,75,103],"with":[23,56,86,104,168,240,250],"real-time":[24,53,119,125,166,244],"polymerase":[25],"chain":[26],"reaction":[27],"(rPCR)/":[28],"reverse-transcription":[29],"(rRT-PCR)":[30],"assays":[31,99,158],"for":[32,76,213],"respiratory":[33,44],"pathogens":[34],"known":[35],"contribute":[37],"the":[39,105,134,144,165,174,185,230],"high":[40],"burden":[41],"of":[42,78,94,131,141,151,171,233],"lower":[43],"tract":[45],"infections.":[46],"The":[47,124,153,226],"team":[49],"sought":[50],"compare":[52,62],"assay":[54,127,137,147,177,188,211,245],"results":[55,246],"panspecies":[57,87,98,136,157,176,187,251],"conventional":[58,121,145,252],"molecular":[59,122],"diagnostics":[60],"sensitivities":[63],"and":[64,83,102,120,143,155,182],"learn":[65],"if":[66],"novel":[67],"viruses":[68],"had":[69],"been":[70],"missed.":[71],"METHODS:":[72],"Specimens":[73],"evidence":[77],"adenovirus":[79],"(AdV),":[80],"enterovirus":[81],"(EV)":[82],"coronavirus":[84],"(CoV)":[85],"gel-based":[88],"nested":[89],"PCR/RT-PCR":[90,253],"assays.":[91,254],"Gene":[92],"sequences":[93],"positive":[96,162],"by":[97,173,180,184,191],"sequenced":[101],"NCBI":[106],"Basic":[107],"Local":[108],"Alignment":[109],"Search":[110],"Tool":[111],"software.":[112],"RESULTS:":[113],"There":[114],"was":[115,207],"considerable":[116],"discordance":[117,206],"between":[118],"methods.":[123],"AdV":[126,135,222],"found":[128],"positivity":[130,140,150,170],"10.4%;":[132],"however,":[133],"detected":[138,148,160],"12.4%":[142],"AdV-Hexon":[146],"19.6%.":[152],"CoV":[154,175],"EV":[156,186],"similarly":[159],"more":[161],"than":[164],"assays,":[167],"7.8%":[172],"versus":[178,189],"4.2%":[179],"rRT-PCR,":[181],"8.0%":[183],"1.0%":[190],"rRT-PCR.":[192],"We":[193],"not":[195],"able":[196],"ascertain":[198],"virus":[199],"viability":[200],"this":[202],"setting.":[203],"While":[204],"most":[205],"likely":[208],"due":[209],"sensitivity":[212,241],"previously":[214],"described":[215],"human":[216],"viruses,":[217],"two":[218,231],"novel,":[219],"possible":[220],"zoonotic":[221],"detected.":[224],"CONCLUSIONS:":[225],"observed":[227],"differences":[228],"modes":[232],"amplification":[234],"suggest":[235],"that":[236],"where":[237],"problem":[239],"is":[242],"suspected,":[243],"might":[247],"be":[248],"supplemented":[249]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":4},{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":1},{"year":2021,"cited_by_count":5}],"updated_date":"2026-10-30T12:39:25.321706","created_date":"2020-08-18T00:00:00"}