{"id":"https://openalex.org/W3045860698","doi":"https://doi.org/10.1186/s12864-020-06931-1","title":"Transcriptome analysis provides insights into the non-methylated lignin synthesis in Paphiopedilum armeniacum seed","display_name":"Transcriptome analysis provides insights into the non-methylated lignin synthesis in Paphiopedilum armeniacum seed","publication_year":2020,"publication_date":"2020-07-29","ids":{"openalex":"https://openalex.org/W3045860698","doi":"https://doi.org/10.1186/s12864-020-06931-1","mag":"3045860698","pmid":"https://pubmed.ncbi.nlm.nih.gov/32727352","pmcid":"https://www.ncbi.nlm.nih.gov/pmc/articles/7391499"},"language":"en","primary_location":{"id":"doi:10.1186/s12864-020-06931-1","doi":"https://doi.org/10.1186/s12864-020-06931-1","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12864-020-06931-1","pdf_url":"https://bmcgenomics.biomedcentral.com/track/pdf/10.1186/s12864-020-06931-1","source":{"id":"https://openalex.org/S28614077","display_name":"BMC Genomics","issn_l":"1471-2164","issn":["1471-2164"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["anvur-scientific","cwts-core","doaj","dongbi-c","doyens","jufo-1","ki-jl-1","medline","norway-1","oarl","poland-140","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Genomics","raw_type":"journal-article"},"volume":null,"type":"article","is_traditional":true,"indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcgenomics.biomedcentral.com/track/pdf/10.1186/s12864-020-06931-1","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5049749026","display_name":"Lin Fang","orcid":"https://orcid.org/0000-0002-9971-4569","observed_orcids":["https://orcid.org/0000-0002-9971-4569"]},"institutions":[{"id":"https://openalex.org/I19820366","display_name":"Chinese Academy of Sciences","ror":"https://ror.org/034t30j35","country_code":"CN","type":"government","lineage":["https://openalex.org/I19820366"]},{"id":"https://openalex.org/I4210120696","display_name":"South China Botanical Garden","ror":"https://ror.org/01xqdxh54","country_code":"CN","type":"facility","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210120696"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Lin Fang","raw_affiliation_strings":["Guangdong Provincial Key Laboratory of Applied Botany, South China Botanical Garden, Chinese Academy of Sciences, Guangzhou, 510650, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Guangdong Provincial Key Laboratory of Applied Botany, South China Botanical Garden, Chinese Academy of Sciences, Guangzhou, 510650, China","institution_ids":["https://openalex.org/I19820366","https://openalex.org/I4210120696"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5054925587","display_name":"Xin Xu","orcid":"https://orcid.org/0000-0002-7701-0667","observed_orcids":["https://orcid.org/0000-0002-7701-0667"]},"institutions":[{"id":"https://openalex.org/I19820366","display_name":"Chinese Academy of Sciences","ror":"https://ror.org/034t30j35","country_code":"CN","type":"government","lineage":["https://openalex.org/I19820366"]},{"id":"https://openalex.org/I4210120696","display_name":"South China Botanical Garden","ror":"https://ror.org/01xqdxh54","country_code":"CN","type":"facility","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210120696"]},{"id":"https://openalex.org/I4210165038","display_name":"University of Chinese Academy of Sciences","ror":"https://ror.org/05qbk4x57","country_code":"CN","type":"education","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210165038"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xin Xu","raw_affiliation_strings":["Guangdong Provincial Key Laboratory of Applied Botany, South China Botanical Garden, Chinese Academy of Sciences, Guangzhou, 510650, China","University of Chinese Academy of Sciences, Beijing, 100049, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Guangdong Provincial Key Laboratory of Applied Botany, South China Botanical Garden, Chinese Academy of Sciences, Guangzhou, 510650, China","institution_ids":["https://openalex.org/I19820366","https://openalex.org/I4210120696"]},{"raw_affiliation_string":"University of Chinese Academy of Sciences, Beijing, 100049, China","institution_ids":["https://openalex.org/I4210165038"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100421171","display_name":"Ji Li","orcid":"https://orcid.org/0000-0003-1160-0813","observed_orcids":["https://orcid.org/0000-0003-1160-0813","https://orcid.org/0009-0008-9654-8623"]},"institutions":[{"id":"https://openalex.org/I19820366","display_name":"Chinese Academy of Sciences","ror":"https://ror.org/034t30j35","country_code":"CN","type":"government","lineage":["https://openalex.org/I19820366"]},{"id":"https://openalex.org/I4210120696","display_name":"South China Botanical Garden","ror":"https://ror.org/01xqdxh54","country_code":"CN","type":"facility","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210120696"]},{"id":"https://openalex.org/I4210165038","display_name":"University of Chinese Academy of Sciences","ror":"https://ror.org/05qbk4x57","country_code":"CN","type":"education","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210165038"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Ji Li","raw_affiliation_strings":["Guangdong Provincial Key Laboratory of Applied Botany, South China Botanical Garden, Chinese Academy of Sciences, Guangzhou, 510650, China","University of Chinese Academy of Sciences, Beijing, 100049, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Guangdong Provincial Key Laboratory of Applied Botany, South China Botanical Garden, Chinese Academy of Sciences, Guangzhou, 510650, China","institution_ids":["https://openalex.org/I19820366","https://openalex.org/I4210120696"]},{"raw_affiliation_string":"University of Chinese Academy of Sciences, Beijing, 100049, China","institution_ids":["https://openalex.org/I4210165038"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5104036330","display_name":"Zheng Feng","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I19820366","display_name":"Chinese Academy of Sciences","ror":"https://ror.org/034t30j35","country_code":"CN","type":"government","lineage":["https://openalex.org/I19820366"]},{"id":"https://openalex.org/I4210120696","display_name":"South China Botanical Garden","ror":"https://ror.org/01xqdxh54","country_code":"CN","type":"facility","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210120696"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Feng Zheng","raw_affiliation_strings":["Guangdong Provincial Key Laboratory of Applied Botany, South China Botanical Garden, Chinese Academy of Sciences, Guangzhou, 510650, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Guangdong Provincial Key Laboratory of Applied Botany, South China Botanical Garden, Chinese Academy of Sciences, Guangzhou, 510650, China","institution_ids":["https://openalex.org/I19820366","https://openalex.org/I4210120696"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5113077791","display_name":"Mingzhi Li","orcid":"https://orcid.org/0000-0002-1829-7303","observed_orcids":["https://orcid.org/0000-0002-1829-7303"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Mingzhi Li","raw_affiliation_strings":["Independent Researcher, Guangzhou, 510555, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Independent Researcher, Guangzhou, 510555, China","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5001672391","display_name":"Jingwei Yan","orcid":"https://orcid.org/0000-0003-4930-0875","observed_orcids":["https://orcid.org/0000-0003-4930-0875"]},"institutions":[{"id":"https://openalex.org/I119454577","display_name":"Nanjing Agricultural University","ror":"https://ror.org/05td3s095","country_code":"CN","type":"education","lineage":["https://openalex.org/I119454577"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jingwei Yan","raw_affiliation_strings":["College of Life Sciences, Nanjing Agricultural University, Nanjing, 210095, Jiangsu, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Life Sciences, Nanjing Agricultural University, Nanjing, 210095, Jiangsu, China","institution_ids":["https://openalex.org/I119454577"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100390930","display_name":"Yuan Li","orcid":"https://orcid.org/0000-0003-1803-6661","observed_orcids":["https://orcid.org/0000-0003-1803-6661"]},"institutions":[{"id":"https://openalex.org/I19820366","display_name":"Chinese Academy of Sciences","ror":"https://ror.org/034t30j35","country_code":"CN","type":"government","lineage":["https://openalex.org/I19820366"]},{"id":"https://openalex.org/I4210120696","display_name":"South China Botanical Garden","ror":"https://ror.org/01xqdxh54","country_code":"CN","type":"facility","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210120696"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yuan Li","raw_affiliation_strings":["Guangdong Provincial Key Laboratory of Applied Botany, South China Botanical Garden, Chinese Academy of Sciences, Guangzhou, 510650, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Guangdong Provincial Key Laboratory of Applied Botany, South China Botanical Garden, Chinese Academy of Sciences, Guangzhou, 510650, China","institution_ids":["https://openalex.org/I19820366","https://openalex.org/I4210120696"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100380942","display_name":"Xinhua Zhang","orcid":"https://orcid.org/0000-0003-4963-7443","observed_orcids":["https://orcid.org/0000-0003-4963-7443"]},"institutions":[{"id":"https://openalex.org/I19820366","display_name":"Chinese Academy of Sciences","ror":"https://ror.org/034t30j35","country_code":"CN","type":"government","lineage":["https://openalex.org/I19820366"]},{"id":"https://openalex.org/I4210120696","display_name":"South China Botanical Garden","ror":"https://ror.org/01xqdxh54","country_code":"CN","type":"facility","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210120696"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xinhua Zhang","raw_affiliation_strings":["Guangdong Provincial Key Laboratory of Applied Botany, South China Botanical Garden, Chinese Academy of Sciences, Guangzhou, 510650, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Guangdong Provincial Key Laboratory of Applied Botany, South China Botanical Garden, Chinese Academy of Sciences, Guangzhou, 510650, China","institution_ids":["https://openalex.org/I19820366","https://openalex.org/I4210120696"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5037340252","display_name":"Lin Li","orcid":"https://orcid.org/0000-0001-7091-9686","observed_orcids":["https://orcid.org/0000-0001-7091-9686"]},"institutions":[{"id":"https://openalex.org/I19820366","display_name":"Chinese Academy of Sciences","ror":"https://ror.org/034t30j35","country_code":"CN","type":"government","lineage":["https://openalex.org/I19820366"]},{"id":"https://openalex.org/I4210120696","display_name":"South China Botanical Garden","ror":"https://ror.org/01xqdxh54","country_code":"CN","type":"facility","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210120696"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Lin Li","raw_affiliation_strings":["Guangdong Provincial Key Laboratory of Applied Botany, South China Botanical Garden, Chinese Academy of Sciences, Guangzhou, 510650, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Guangdong Provincial Key Laboratory of Applied Botany, South China Botanical Garden, Chinese Academy of Sciences, Guangzhou, 510650, China","institution_ids":["https://openalex.org/I19820366","https://openalex.org/I4210120696"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5060243216","display_name":"Guohua Ma","orcid":"https://orcid.org/0000-0001-8884-2453","observed_orcids":["https://orcid.org/0000-0001-8884-2453"]},"institutions":[{"id":"https://openalex.org/I19820366","display_name":"Chinese Academy of Sciences","ror":"https://ror.org/034t30j35","country_code":"CN","type":"government","lineage":["https://openalex.org/I19820366"]},{"id":"https://openalex.org/I4210120696","display_name":"South China Botanical Garden","ror":"https://ror.org/01xqdxh54","country_code":"CN","type":"facility","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210120696"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Guohua Ma","raw_affiliation_strings":["Guangdong Provincial Key Laboratory of Applied Botany, South China Botanical Garden, Chinese Academy of Sciences, Guangzhou, 510650, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Guangdong Provincial Key Laboratory of Applied Botany, South China Botanical Garden, Chinese Academy of Sciences, Guangzhou, 510650, China","institution_ids":["https://openalex.org/I19820366","https://openalex.org/I4210120696"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5082220077","display_name":"Aying Zhang","orcid":"https://orcid.org/0000-0003-3779-1603","observed_orcids":["https://orcid.org/0000-0003-3779-1603"]},"institutions":[{"id":"https://openalex.org/I119454577","display_name":"Nanjing Agricultural University","ror":"https://ror.org/05td3s095","country_code":"CN","type":"education","lineage":["https://openalex.org/I119454577"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Aying Zhang","raw_affiliation_strings":["College of Life Sciences, Nanjing Agricultural University, Nanjing, 210095, Jiangsu, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Life Sciences, Nanjing Agricultural University, Nanjing, 210095, Jiangsu, China","institution_ids":["https://openalex.org/I119454577"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5046272823","display_name":"Fubing Lv","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I4210099004","display_name":"Guangdong Academy of Agricultural Sciences","ror":"https://ror.org/01rkwtz72","country_code":"CN","type":"government","lineage":["https://openalex.org/I4210099004"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Fubing Lv","raw_affiliation_strings":["Environmental Horticulture Research Institute, Guangdong Academy of Agricultural Sciences, Guangzhou, 510640, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Environmental Horticulture Research Institute, Guangdong Academy of Agricultural Sciences, Guangzhou, 510640, China","institution_ids":["https://openalex.org/I4210099004"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101675451","display_name":"Kunlin Wu","orcid":"https://orcid.org/0000-0003-3306-1320","observed_orcids":["https://orcid.org/0000-0003-3306-1320","https://orcid.org/0009-0007-7410-2279"]},"institutions":[{"id":"https://openalex.org/I19820366","display_name":"Chinese Academy of Sciences","ror":"https://ror.org/034t30j35","country_code":"CN","type":"government","lineage":["https://openalex.org/I19820366"]},{"id":"https://openalex.org/I4210120696","display_name":"South China Botanical Garden","ror":"https://ror.org/01xqdxh54","country_code":"CN","type":"facility","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210120696"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Kunlin Wu","raw_affiliation_strings":["Guangdong Provincial Key Laboratory of Applied Botany, South China Botanical Garden, Chinese Academy of Sciences, Guangzhou, 510650, China. wkl8@scib.ac.cn","Guangdong Provincial Key Laboratory of Applied Botany, South China Botanical Garden, Chinese Academy of Sciences, Guangzhou, 510650, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Guangdong Provincial Key Laboratory of Applied Botany, South China Botanical Garden, Chinese Academy of Sciences, Guangzhou, 510650, China. wkl8@scib.ac.cn","institution_ids":["https://openalex.org/I19820366","https://openalex.org/I4210120696"]},{"raw_affiliation_string":"Guangdong Provincial Key Laboratory of Applied Botany, South China Botanical Garden, Chinese Academy of Sciences, Guangzhou, 510650, China","institution_ids":["https://openalex.org/I19820366","https://openalex.org/I4210120696"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5075574514","display_name":"Songjun Zeng","orcid":"https://orcid.org/0000-0001-7446-333X","observed_orcids":["https://orcid.org/0000-0001-7446-333X","https://orcid.org/0000-0002-8807-9280"]},"institutions":[{"id":"https://openalex.org/I19820366","display_name":"Chinese Academy of Sciences","ror":"https://ror.org/034t30j35","country_code":"CN","type":"government","lineage":["https://openalex.org/I19820366"]},{"id":"https://openalex.org/I4210120696","display_name":"South China Botanical Garden","ror":"https://ror.org/01xqdxh54","country_code":"CN","type":"facility","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210120696"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Songjun Zeng","raw_affiliation_strings":["Guangdong Provincial Key Laboratory of Applied Botany, South China Botanical Garden, Chinese Academy of Sciences, Guangzhou, 510650, China. zengsongjun@scib.ac.cn","Key Laboratory of South China Agricultural Plant Molecular Analysis and Gene Improvement, South China Botanical Garden, Chinese Academy of Sciences, Guangzhou, 510650, China. zengsongjun@scib.ac.cn","Key Laboratory of South China Agricultural Plant Molecular Analysis and Gene Improvement, South China Botanical Garden, Chinese Academy of Sciences, Guangzhou, 510650, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Guangdong Provincial Key Laboratory of Applied Botany, South China Botanical Garden, Chinese Academy of Sciences, Guangzhou, 510650, China. zengsongjun@scib.ac.cn","institution_ids":["https://openalex.org/I19820366","https://openalex.org/I4210120696"]},{"raw_affiliation_string":"Key Laboratory of South China Agricultural Plant Molecular Analysis and Gene Improvement, South China Botanical Garden, Chinese Academy of Sciences, Guangzhou, 510650, China. zengsongjun@scib.ac.cn","institution_ids":["https://openalex.org/I19820366","https://openalex.org/I4210120696"]},{"raw_affiliation_string":"Key Laboratory of South China Agricultural Plant Molecular Analysis and Gene Improvement, South China Botanical Garden, Chinese Academy of Sciences, Guangzhou, 510650, China","institution_ids":["https://openalex.org/I19820366","https://openalex.org/I4210120696"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5075574514","https://openalex.org/A5101675451"],"corresponding_institution_ids":["https://openalex.org/I19820366","https://openalex.org/I4210120696"],"apc_list":{"value":2290,"currency":"USD","value_usd":2290},"apc_paid":{"value":2290,"currency":"USD","value_usd":2290},"fwci":1.5008,"has_fulltext":true,"cited_by_count":47,"citation_normalized_percentile":{"value":0.82277463,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":88,"max":99},"biblio":{"volume":"21","issue":"1","first_page":"524","last_page":"524"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11237","display_name":"Plant Gene Expression Analysis","score":0.9330999851226807,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11237","display_name":"Plant Gene Expression Analysis","score":0.9330999851226807,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10869","display_name":"Polysaccharides and Plant Cell Walls","score":0.017000000923871994,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11208","display_name":"Lignin and Wood Chemistry","score":0.014299999922513962,"subfield":{"id":"https://openalex.org/subfields/1508","display_name":"Process Chemistry and Technology"},"field":{"id":"https://openalex.org/fields/15","display_name":"Chemical Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/seed-maturation","display_name":"seed maturation","score":0.7059999704360962},{"id":"https://openalex.org/keywords/seed-germination-inhibition","display_name":"seed germination inhibition","score":0.8730000257492065},{"id":"https://openalex.org/keywords/lignin-biosynthesis","display_name":"lignin biosynthesis","score":0.765999972820282},{"id":"https://openalex.org/keywords/phenylpropanoid-biosynthesis","display_name":"phenylpropanoid biosynthesis","score":0.9660000205039978},{"id":"https://openalex.org/keywords/phenylalanine-metabolism","display_name":"phenylalanine metabolism","score":0.9629999995231628},{"id":"https://openalex.org/keywords/lignification","display_name":"lignification","score":0.5799999833106995},{"id":"https://openalex.org/keywords/lignin-monomer-composition","display_name":"lignin monomer composition","score":0.6269999742507935},{"id":"https://openalex.org/keywords/pal","display_name":"PAL","score":0.3840000033378601},{"id":"https://openalex.org/keywords/4-coumarate-coa-ligase","display_name":"4-coumarate:CoA ligase","score":0.9160000085830688},{"id":"https://openalex.org/keywords/hct","display_name":"HCT","score":0.7979999780654907},{"id":"https://openalex.org/keywords/caffeoyl-coa-o-methyltransferase","display_name":"caffeoyl-CoA O-methyltransferase","score":0.871999979019165},{"id":"https://openalex.org/keywords/ferulate-5-hydroxylase","display_name":"ferulate 5-hydroxylase","score":0.9039999842643738},{"id":"https://openalex.org/keywords/catechol-o-methyltransferase","display_name":"catechol-O-methyltransferase","score":0.8949999809265137},{"id":"https://openalex.org/keywords/differentially-expressed-genes","display_name":"differentially expressed genes","score":0.656000018119812},{"id":"https://openalex.org/keywords/transcriptome","display_name":"transcriptome","score":0.6060000061988831}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.8738917112350464},{"id":"https://openalex.org/C2776559899","wikidata":"https://www.wikidata.org/wiki/Q417181","display_name":"Phenylpropanoid","level":4,"score":0.85505211353302},{"id":"https://openalex.org/C162317418","wikidata":"https://www.wikidata.org/wiki/Q252857","display_name":"Transcriptome","level":4,"score":0.7437875270843506},{"id":"https://openalex.org/C2781052789","wikidata":"https://www.wikidata.org/wiki/Q184817","display_name":"Lignin","level":2,"score":0.7361944913864136},{"id":"https://openalex.org/C2781370656","wikidata":"https://www.wikidata.org/wiki/Q25308","display_name":"Orchidaceae","level":2,"score":0.717075526714325},{"id":"https://openalex.org/C100701293","wikidata":"https://www.wikidata.org/wiki/Q193838","display_name":"Germination","level":2,"score":0.5652385354042053},{"id":"https://openalex.org/C152724338","wikidata":"https://www.wikidata.org/wiki/Q909442","display_name":"KEGG","level":5,"score":0.5473033785820007},{"id":"https://openalex.org/C2777461220","wikidata":"https://www.wikidata.org/wiki/Q589029","display_name":"Germplasm","level":2,"score":0.5189132690429688},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.49325913190841675},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.4346996247768402},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.3231908679008484},{"id":"https://openalex.org/C553450214","wikidata":"https://www.wikidata.org/wiki/Q851162","display_name":"Biosynthesis","level":3,"score":0.2441265881061554},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.22042325139045715}],"mesh":[{"descriptor_ui":"D008031","descriptor_name":"Lignin","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D012639","descriptor_name":"Seeds","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012639","descriptor_name":"Seeds","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D018506","descriptor_name":"Gene Expression Regulation, Plant","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018525","descriptor_name":"Germination","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D029595","descriptor_name":"Orchidaceae","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D059467","descriptor_name":"Transcriptome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":8,"locations":[{"id":"doi:10.1186/s12864-020-06931-1","doi":"https://doi.org/10.1186/s12864-020-06931-1","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12864-020-06931-1","pdf_url":"https://bmcgenomics.biomedcentral.com/track/pdf/10.1186/s12864-020-06931-1","source":{"id":"https://openalex.org/S28614077","display_name":"BMC Genomics","issn_l":"1471-2164","issn":["1471-2164"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["anvur-scientific","cwts-core","doaj","dongbi-c","doyens","jufo-1","ki-jl-1","medline","norway-1","oarl","poland-140","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Genomics","raw_type":"journal-article"},{"id":"doi:10.21203/rs.2.13152/v4","doi":"https://doi.org/10.21203/rs.2.13152/v4","is_oa":true,"landing_page_url":"https://doi.org/10.21203/rs.2.13152/v4","pdf_url":"https://www.researchsquare.com/article/rs-3866/v4.pdf?c=1637261334000","source":{"id":"https://openalex.org/S4306525896","display_name":"Research Square","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Research Square","raw_type":"posted-content"},{"id":"doi:10.21203/rs.2.13152/v3","doi":"https://doi.org/10.21203/rs.2.13152/v3","is_oa":true,"landing_page_url":"https://doi.org/10.21203/rs.2.13152/v3","pdf_url":"https://www.researchsquare.com/article/rs-3866/v3.pdf","source":{"id":"https://openalex.org/S4306525896","display_name":"Research Square","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Research Square","raw_type":"posted-content"},{"id":"doi:10.21203/rs.2.13152/v2","doi":"https://doi.org/10.21203/rs.2.13152/v2","is_oa":true,"landing_page_url":"https://doi.org/10.21203/rs.2.13152/v2","pdf_url":"https://www.researchsquare.com/article/rs-3866/v2.pdf","source":{"id":"https://openalex.org/S4306525896","display_name":"Research Square","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Research Square","raw_type":"posted-content"},{"id":"doi:10.21203/rs.2.13152/v1","doi":"https://doi.org/10.21203/rs.2.13152/v1","is_oa":true,"landing_page_url":"https://doi.org/10.21203/rs.2.13152/v1","pdf_url":"https://www.researchsquare.com/article/rs-3866/latest.pdf","source":{"id":"https://openalex.org/S4306525896","display_name":"Research Square","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Research Square","raw_type":"posted-content"},{"id":"pmid:32727352","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/32727352","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC genomics","raw_type":"Journal Article"},{"id":"pmh:oai:pubmedcentral.nih.gov:7391499","doi":null,"is_oa":true,"landing_page_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC7391499/","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Genomics","raw_type":"Text"},{"id":"pmh:oai:doaj.org/article:9331aba3efa9417dad70299388b566ef","doi":null,"is_oa":true,"landing_page_url":"https://doaj.org/article/9331aba3efa9417dad70299388b566ef","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Genomics, Vol 21, Iss 1, Pp 1-15 (2020)","raw_type":"article"}],"best_oa_location":{"id":"doi:10.1186/s12864-020-06931-1","doi":"https://doi.org/10.1186/s12864-020-06931-1","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12864-020-06931-1","pdf_url":"https://bmcgenomics.biomedcentral.com/track/pdf/10.1186/s12864-020-06931-1","source":{"id":"https://openalex.org/S28614077","display_name":"BMC Genomics","issn_l":"1471-2164","issn":["1471-2164"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["anvur-scientific","cwts-core","doaj","dongbi-c","doyens","jufo-1","ki-jl-1","medline","norway-1","oarl","poland-140","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Genomics","raw_type":"journal-article"},"sustainable_development_goals":[],"study_designs":[],"awards":[{"id":"https://openalex.org/G1247365824","display_name":null,"funder_award_id":"AB2018026","funder_id":"https://openalex.org/F4320321133","funder_display_name":"Chinese Academy of Sciences"},{"id":"https://openalex.org/G2050449771","display_name":null,"funder_award_id":"2018B020202001","funder_id":"https://openalex.org/F4320335777","funder_display_name":"National Key Research and Development Program of China"},{"id":"https://openalex.org/G3377740156","display_name":null,"funder_award_id":"31902062","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G7138446773","display_name":null,"funder_award_id":"2018A030313686","funder_id":"https://openalex.org/F4320321921","funder_display_name":"Natural Science Foundation of Guangdong Province"},{"id":"https://openalex.org/G834002893","display_name":null,"funder_award_id":"KFJ-BRP-007","funder_id":"https://openalex.org/F4320321133","funder_display_name":"Chinese Academy of Sciences"},{"id":"https://openalex.org/G8508123868","display_name":null,"funder_award_id":"2016YFC0503104","funder_id":"https://openalex.org/F4320335777","funder_display_name":"National Key Research and Development Program of China"},{"id":"https://openalex.org/G8588774630","display_name":null,"funder_award_id":"AB2018002","funder_id":"https://openalex.org/F4320321133","funder_display_name":"Chinese Academy of Sciences"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320321133","display_name":"Chinese Academy of Sciences","ror":"https://ror.org/034t30j35"},{"id":"https://openalex.org/F4320321921","display_name":"Natural Science Foundation of Guangdong Province","ror":null},{"id":"https://openalex.org/F4320335777","display_name":"National Key Research and Development Program of China","ror":null},{"id":"https://openalex.org/F4320336332","display_name":"Modern Agricultural Technology Industry System of Shandong province","ror":null}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W3045860698.pdf","grobid_xml":"https://content.openalex.org/works/W3045860698.grobid-xml"},"referenced_works_count":42,"referenced_works":["https://openalex.org/W1481615534","https://openalex.org/W1527927437","https://openalex.org/W1901673506","https://openalex.org/W1967497630","https://openalex.org/W1967592102","https://openalex.org/W1969918920","https://openalex.org/W1987792974","https://openalex.org/W2003604861","https://openalex.org/W2009024545","https://openalex.org/W2011649297","https://openalex.org/W2011657487","https://openalex.org/W2037937897","https://openalex.org/W2041927889","https://openalex.org/W2043168770","https://openalex.org/W2066559135","https://openalex.org/W2071313581","https://openalex.org/W2091142793","https://openalex.org/W2126057445","https://openalex.org/W2133790733","https://openalex.org/W2135995549","https://openalex.org/W2136857652","https://openalex.org/W2154139219","https://openalex.org/W2154613080","https://openalex.org/W2159560715","https://openalex.org/W2165295937","https://openalex.org/W2187239605","https://openalex.org/W2295419669","https://openalex.org/W2324555823","https://openalex.org/W2341053249","https://openalex.org/W2387266202","https://openalex.org/W2414236331","https://openalex.org/W2417998061","https://openalex.org/W2557997692","https://openalex.org/W2560088102","https://openalex.org/W2607754641","https://openalex.org/W2743809348","https://openalex.org/W2784129823","https://openalex.org/W2789187245","https://openalex.org/W2887977559","https://openalex.org/W2889685276","https://openalex.org/W2917814331","https://openalex.org/W2935706461"],"related_works":["https://openalex.org/W6902051334","https://openalex.org/W3111092746","https://openalex.org/W2570094155","https://openalex.org/W4401229621","https://openalex.org/W2088448742","https://openalex.org/W3199420819","https://openalex.org/W4384200745","https://openalex.org/W3006582883","https://openalex.org/W3182553957","https://openalex.org/W4288038017"],"abstract_inverted_index":{"BACKGROUNDS:":[0],"Paphiopedilum":[1,34,70],"is":[2],"an":[3],"important":[4],"genus":[5],"of":[6,22,25,32,62,69,84,105,117,164,197,211,223,227],"the":[7,78,96,136,145,179,182,193,209,224],"orchid":[8],"family":[9],"Orchidaceae":[10],"and":[11,27,46,107,123,151,158,167,185,202,218],"has":[12],"high":[13],"horticultural":[14],"value.":[15],"The":[16,49,81,162],"wild":[17],"populations":[18],"are":[19,36,53],"under":[20],"threat":[21],"extinction":[23],"because":[24],"overcollection":[26],"habitat":[28],"destruction.":[29],"Mature":[30],"seeds":[31,201],"most":[33],"species":[35],"difficult":[37],"to":[38,94,177,181],"germinate,":[39],"which":[40,74],"severely":[41],"restricts":[42],"their":[43],"germplasm":[44],"conservation":[45],"commercial":[47],"production.":[48],"factors":[50],"inhibiting":[51],"germination":[52,79],"largely":[54],"unknown.":[55],"RESULTS:":[56],"In":[57],"this":[58],"study,":[59],"large":[60,115],"amounts":[61],"non-methylated":[63,100],"lignin":[64,101,137,160,213],"accumulated":[65],"during":[66,126,144],"seed":[67,87,127,217],"maturation":[68,128],"armeniacum":[71,86],"(P.":[72],"armeniacum),":[73],"negatively":[75],"correlates":[76],"with":[77,120,156],"rate.":[80],"transcriptome":[82],"profiles":[83],"P.":[85],"at":[88,171],"different":[89,141],"development":[90],"stages":[91],"were":[92,129,169],"compared":[93],"explore":[95],"molecular":[97,225],"clues":[98],"for":[99],"synthesis.":[102],"Kyoto":[103],"Encyclopedia":[104],"Genes":[106],"Genomes":[108],"(KEGG)":[109],"enrichment":[110],"analysis":[111,191],"showed":[112],"that":[113],"a":[114,172,220],"number":[116],"genes":[118,134,199],"associated":[119,155],"phenylpropanoid":[121],"biosynthesis":[122],"phenylalanine":[124],"metabolism":[125],"differentially":[130],"expressed.":[131],"Several":[132],"key":[133],"in":[135,200,216],"biosynthetic":[138],"pathway":[139],"displayed":[140],"expression":[142,163,195],"patterns":[143],"lignification":[146,229],"process.":[147,230],"PAL,":[148],"4CL,":[149],"HCT,":[150],"CSE":[152],"upregulation":[153],"was":[154],"C":[157],"H":[159],"accumulation.":[161],"CCoAOMT,":[165],"F5H,":[166],"COMT":[168],"maintained":[170],"low":[173],"level":[174],"or":[175],"down-regulated":[176],"inhibit":[178],"conversion":[180],"typical":[183],"G":[184],"S":[186],"lignin.":[187],"Quantitative":[188],"real-time":[189],"RT-PCR":[190],"confirmed":[192],"altered":[194],"levels":[196],"these":[198],"vegetative":[203],"tissues.":[204],"CONCLUSIONS:":[205],"This":[206],"work":[207],"demonstrated":[208],"plasticity":[210],"natural":[212],"polymer":[214],"assembly":[215],"provided":[219],"better":[221],"understanding":[222],"mechanism":[226],"seed-specific":[228]},"counts_by_year":[{"year":2026,"cited_by_count":5},{"year":2025,"cited_by_count":14},{"year":2024,"cited_by_count":8},{"year":2023,"cited_by_count":4},{"year":2022,"cited_by_count":8},{"year":2021,"cited_by_count":7},{"year":2020,"cited_by_count":1}],"updated_date":"2026-11-10T11:39:43.021295","created_date":"2020-08-03T00:00:00"}