{"id":"https://openalex.org/W3000375653","doi":"https://doi.org/10.1016/j.meegid.2020.104178","title":"Genomic features, whole-genome phylogenetic and comparative genomic analysis of extreme-drug-resistant ventilator-associated-pneumonia Acinetobacter baumannii strain in a Vietnam hospital","display_name":"Genomic features, whole-genome phylogenetic and comparative genomic analysis of extreme-drug-resistant ventilator-associated-pneumonia Acinetobacter baumannii strain in a Vietnam hospital","publication_year":2020,"publication_date":"2020-01-07","ids":{"openalex":"https://openalex.org/W3000375653","doi":"https://doi.org/10.1016/j.meegid.2020.104178","mag":"3000375653","pmid":"https://pubmed.ncbi.nlm.nih.gov/31917358"},"language":"en","primary_location":{"id":"doi:10.1016/j.meegid.2020.104178","doi":"https://doi.org/10.1016/j.meegid.2020.104178","is_oa":true,"landing_page_url":"https://doi.org/10.1016/j.meegid.2020.104178","pdf_url":null,"source":{"id":"https://openalex.org/S142765166","display_name":"Infection Genetics and Evolution","issn_l":"1567-1348","issn":["1567-1348","1567-7257"],"is_oa":false,"is_in_doaj":true,"is_core":true,"listed_in":["cwts-core","doaj","dongbi-d","doyens","jufo-1","ki-jl-1","medline","norway-1","oarl","poland-100"],"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Infection, Genetics and Evolution","raw_type":"journal-article"},"volume":null,"type":"article","is_traditional":true,"indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://doi.org/10.1016/j.meegid.2020.104178","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5060942424","display_name":"Nguyen Tuan","orcid":"https://orcid.org/0000-0001-9268-9578","observed_orcids":["https://orcid.org/0000-0001-9268-9578"]},"institutions":[{"id":"https://openalex.org/I47265099","display_name":"Ho Chi Minh City University of Technology","ror":"https://ror.org/04qva2324","country_code":"VN","type":"education","lineage":["https://openalex.org/I123565023","https://openalex.org/I47265099"]}],"countries":["VN"],"is_corresponding":true,"raw_author_name":"Nguyen Si-Tuan","raw_affiliation_strings":["Department of Biotechnology, Faculty of Chemical Engineering, Ho Chi Minh City University of Technology, HCM National University, Vietnam; Department of Medical Microbiology, Thongnhat General Hospital of Dongnai Province, Vietnam. Electronic address: nsituan@gmail.com","Department of Biotechnology, Faculty of Chemical Engineering, Ho Chi Minh City University of Technology, HCM National University, Vietnam","Department of Medical Microbiology, Thongnhat General Hospital of Dongnai Province, Vietnam"],"raw_orcid":"https://orcid.org/0000-0001-9268-9578","affiliations":[{"raw_affiliation_string":"Department of Biotechnology, Faculty of Chemical Engineering, Ho Chi Minh City University of Technology, HCM National University, Vietnam; Department of Medical Microbiology, Thongnhat General Hospital of Dongnai Province, Vietnam. Electronic address: nsituan@gmail.com","institution_ids":["https://openalex.org/I47265099"]},{"raw_affiliation_string":"Department of Biotechnology, Faculty of Chemical Engineering, Ho Chi Minh City University of Technology, HCM National University, Vietnam","institution_ids":["https://openalex.org/I47265099"]},{"raw_affiliation_string":"Department of Medical Microbiology, Thongnhat General Hospital of Dongnai Province, Vietnam","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5015137524","display_name":"Hua My Ngoc","orcid":null,"observed_orcids":[]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Hua My Ngoc","raw_affiliation_strings":["Department of Medical Biochemistry, Thongnhat General Hospital of Dongnai Province, Vietnam"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Medical Biochemistry, Thongnhat General Hospital of Dongnai Province, Vietnam","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5069538646","display_name":"Le Duy Nhat","orcid":null,"observed_orcids":[]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Le Duy Nhat","raw_affiliation_strings":["Department of Medical Microbiology, Thongnhat General Hospital of Dongnai Province, Vietnam"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Medical Microbiology, Thongnhat General Hospital of Dongnai Province, Vietnam","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5090975825","display_name":"Nguy\u1ec5n V\u0103n C\u01b0\u01a1ng","orcid":"https://orcid.org/0000-0002-6646-2705","observed_orcids":["https://orcid.org/0000-0002-6646-2705"]},"institutions":[{"id":"https://openalex.org/I4405277745","display_name":"Vinmec Hi-Tech Center","ror":"https://ror.org/03refhz68","country_code":"VN","type":"facility","lineage":["https://openalex.org/I4387154326","https://openalex.org/I4405276989","https://openalex.org/I4405277745"]}],"countries":["VN"],"is_corresponding":false,"raw_author_name":"Cuong Nguyen","raw_affiliation_strings":["Vinmec HiTech Center, Hanoi, Vietnam"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Vinmec HiTech Center, Hanoi, Vietnam","institution_ids":["https://openalex.org/I4405277745"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101459849","display_name":"Huy Quang Pham","orcid":"https://orcid.org/0000-0003-3495-3769","observed_orcids":["https://orcid.org/0000-0003-3495-3769"]},"institutions":[{"id":"https://openalex.org/I31419693","display_name":"Kyungpook National University","ror":"https://ror.org/040c17130","country_code":"KR","type":"education","lineage":["https://openalex.org/I31419693"]}],"countries":["KR"],"is_corresponding":false,"raw_author_name":"Huy Quang Pham","raw_affiliation_strings":["School of Applied Biosciences, College of Agriculture and Life Sciences, Kyungpook National University, Daegu 702-701, Republic of Korea"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Applied Biosciences, College of Agriculture and Life Sciences, Kyungpook National University, Daegu 702-701, Republic of Korea","institution_ids":["https://openalex.org/I31419693"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5081488360","display_name":"Nguy\u1ec5n Th\u00fay H\u01b0\u01a1ng","orcid":"https://orcid.org/0000-0001-6931-4495","observed_orcids":["https://orcid.org/0000-0001-6931-4495"]},"institutions":[{"id":"https://openalex.org/I47265099","display_name":"Ho Chi Minh City University of Technology","ror":"https://ror.org/04qva2324","country_code":"VN","type":"education","lineage":["https://openalex.org/I123565023","https://openalex.org/I47265099"]}],"countries":["VN"],"is_corresponding":false,"raw_author_name":"Nguyen Thuy Huong","raw_affiliation_strings":["Department of Biotechnology, Faculty of Chemical Engineering, Ho Chi Minh City University of Technology, HCM National University, Vietnam"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biotechnology, Faculty of Chemical Engineering, Ho Chi Minh City University of Technology, HCM National University, Vietnam","institution_ids":["https://openalex.org/I47265099"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5060942424"],"corresponding_institution_ids":["https://openalex.org/I47265099"],"apc_list":{"value":2630,"currency":"USD","value_usd":2630},"apc_paid":{"value":2630,"currency":"USD","value_usd":2630},"fwci":1.1762,"has_fulltext":false,"cited_by_count":16,"citation_normalized_percentile":{"value":0.73008905,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":91,"max":99},"biblio":{"volume":"80","issue":null,"first_page":"104178","last_page":"104178"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10147","display_name":"Antibiotic Resistance in Bacteria","score":0.9984999895095825,"subfield":{"id":"https://openalex.org/subfields/2726","display_name":"Microbiology (medical)"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T10147","display_name":"Antibiotic Resistance in Bacteria","score":0.9984999895095825,"subfield":{"id":"https://openalex.org/subfields/2726","display_name":"Microbiology (medical)"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T12824","display_name":"Infections and bacterial resistance","score":0.0003000000142492354,"subfield":{"id":"https://openalex.org/subfields/2726","display_name":"Microbiology (medical)"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T13849","display_name":"Enterobacteriaceae and Cronobacter Research","score":9.999999747378752e-05,"subfield":{"id":"https://openalex.org/subfields/2404","display_name":"Microbiology"},"field":{"id":"https://openalex.org/fields/24","display_name":"Immunology and Microbiology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/acinetobacter-baumannii","display_name":"Acinetobacter baumannii","score":1.0},{"id":"https://openalex.org/keywords/ventilator-associated-pneumonia","display_name":"ventilator-associated pneumonia","score":0.9900000095367432},{"id":"https://openalex.org/keywords/antimicrobial-resistance-genes","display_name":"antimicrobial resistance genes","score":0.8519999980926514},{"id":"https://openalex.org/keywords/pan-genome","display_name":"pan-genome","score":0.8349999785423279},{"id":"https://openalex.org/keywords/prophages","display_name":"prophages","score":0.6430000066757202},{"id":"https://openalex.org/keywords/virulence-factors","display_name":"virulence factors","score":0.9800000190734863},{"id":"https://openalex.org/keywords/whole-genome-phylogeny","display_name":"whole-genome phylogeny","score":0.8379999995231628},{"id":"https://openalex.org/keywords/multilocus-sequence-typing","display_name":"multilocus sequence typing","score":0.6660000085830688},{"id":"https://openalex.org/keywords/comparative-genomics","display_name":"comparative genomics","score":0.5849999785423279}],"concepts":[{"id":"https://openalex.org/C2776315533","wikidata":"https://www.wikidata.org/wiki/Q3241189","display_name":"Acinetobacter baumannii","level":4,"score":0.8323094844818115},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.7989844679832458},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.7634954452514648},{"id":"https://openalex.org/C73445445","wikidata":"https://www.wikidata.org/wiki/Q1712327","display_name":"Prophage","level":5,"score":0.7305705547332764},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.6039167642593384},{"id":"https://openalex.org/C24432333","wikidata":"https://www.wikidata.org/wiki/Q2068526","display_name":"Whole genome sequencing","level":4,"score":0.5163882374763489},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.5117616653442383},{"id":"https://openalex.org/C60987743","wikidata":"https://www.wikidata.org/wiki/Q1460232","display_name":"Virulence","level":3,"score":0.5054953098297119},{"id":"https://openalex.org/C193252679","wikidata":"https://www.wikidata.org/wiki/Q242125","display_name":"Phylogenetic tree","level":3,"score":0.4773193299770355},{"id":"https://openalex.org/C89566754","wikidata":"https://www.wikidata.org/wiki/Q2273828","display_name":"Genome project","level":4,"score":0.455009400844574},{"id":"https://openalex.org/C105176652","wikidata":"https://www.wikidata.org/wiki/Q1147112","display_name":"Comparative genomics","level":5,"score":0.44589048624038696},{"id":"https://openalex.org/C77434933","wikidata":"https://www.wikidata.org/wiki/Q4043440","display_name":"Multilocus sequence typing","level":4,"score":0.4403531551361084},{"id":"https://openalex.org/C189206191","wikidata":"https://www.wikidata.org/wiki/Q222046","display_name":"Genomics","level":4,"score":0.30589449405670166},{"id":"https://openalex.org/C2777637488","wikidata":"https://www.wikidata.org/wiki/Q31856","display_name":"Pseudomonas aeruginosa","level":3,"score":0.16936469078063965},{"id":"https://openalex.org/C135763542","wikidata":"https://www.wikidata.org/wiki/Q106016","display_name":"Genotype","level":3,"score":0.12246257066726685},{"id":"https://openalex.org/C523546767","wikidata":"https://www.wikidata.org/wiki/Q10876","display_name":"Bacteria","level":2,"score":0.09804102778434753},{"id":"https://openalex.org/C2776441376","wikidata":"https://www.wikidata.org/wiki/Q165028","display_name":"Bacteriophage","level":4,"score":0.06720194220542908},{"id":"https://openalex.org/C547475151","wikidata":"https://www.wikidata.org/wiki/Q25419","display_name":"Escherichia coli","level":3,"score":0.0}],"mesh":[{"descriptor_ui":"D000151","descriptor_name":"Acinetobacter Infections","qualifier_ui":"Q000382","qualifier_name":"microbiology","is_major_topic":true},{"descriptor_ui":"D000151","descriptor_name":"Acinetobacter Infections","qualifier_ui":"Q000453","qualifier_name":"epidemiology","is_major_topic":true},{"descriptor_ui":"D000900","descriptor_name":"Anti-Bacterial Agents","qualifier_ui":"Q000494","qualifier_name":"pharmacology","is_major_topic":false},{"descriptor_ui":"D003428","descriptor_name":"Cross Infection","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008826","descriptor_name":"Microbial Sensitivity Tests","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010802","descriptor_name":"Phylogeny","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014744","descriptor_name":"Vietnam","qualifier_ui":"Q000453","qualifier_name":"epidemiology","is_major_topic":false},{"descriptor_ui":"D016680","descriptor_name":"Genome, Bacterial","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D024881","descriptor_name":"Drug Resistance, Bacterial","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D037521","descriptor_name":"Virulence Factors","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D040981","descriptor_name":"Acinetobacter baumannii","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":true},{"descriptor_ui":"D040981","descriptor_name":"Acinetobacter baumannii","qualifier_ui":"Q000187","qualifier_name":"drug effects","is_major_topic":false},{"descriptor_ui":"D040981","descriptor_name":"Acinetobacter baumannii","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true}],"locations_count":2,"locations":[{"id":"doi:10.1016/j.meegid.2020.104178","doi":"https://doi.org/10.1016/j.meegid.2020.104178","is_oa":true,"landing_page_url":"https://doi.org/10.1016/j.meegid.2020.104178","pdf_url":null,"source":{"id":"https://openalex.org/S142765166","display_name":"Infection Genetics and Evolution","issn_l":"1567-1348","issn":["1567-1348","1567-7257"],"is_oa":false,"is_in_doaj":true,"is_core":true,"listed_in":["cwts-core","doaj","dongbi-d","doyens","jufo-1","ki-jl-1","medline","norway-1","oarl","poland-100"],"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Infection, Genetics and Evolution","raw_type":"journal-article"},{"id":"pmid:31917358","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/31917358","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases","raw_type":"Journal Article"}],"best_oa_location":{"id":"doi:10.1016/j.meegid.2020.104178","doi":"https://doi.org/10.1016/j.meegid.2020.104178","is_oa":true,"landing_page_url":"https://doi.org/10.1016/j.meegid.2020.104178","pdf_url":null,"source":{"id":"https://openalex.org/S142765166","display_name":"Infection Genetics and Evolution","issn_l":"1567-1348","issn":["1567-1348","1567-7257"],"is_oa":false,"is_in_doaj":true,"is_core":true,"listed_in":["cwts-core","doaj","dongbi-d","doyens","jufo-1","ki-jl-1","medline","norway-1","oarl","poland-100"],"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Infection, Genetics and Evolution","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/3","display_name":"Good health and well-being","score":0.9537000060081482}],"study_designs":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":32,"referenced_works":["https://openalex.org/W1484660603","https://openalex.org/W1502121327","https://openalex.org/W1584241287","https://openalex.org/W1921607560","https://openalex.org/W1937168769","https://openalex.org/W1984034914","https://openalex.org/W2021927988","https://openalex.org/W2023058046","https://openalex.org/W2035840565","https://openalex.org/W2042455145","https://openalex.org/W2044776483","https://openalex.org/W2045843097","https://openalex.org/W2113079985","https://openalex.org/W2120902911","https://openalex.org/W2124166542","https://openalex.org/W2125456570","https://openalex.org/W2125861108","https://openalex.org/W2128777911","https://openalex.org/W2131271579","https://openalex.org/W2134852597","https://openalex.org/W2137721714","https://openalex.org/W2143485490","https://openalex.org/W2149429041","https://openalex.org/W2150550043","https://openalex.org/W2153148746","https://openalex.org/W2158229527","https://openalex.org/W2162191692","https://openalex.org/W2170283189","https://openalex.org/W2182397000","https://openalex.org/W2206071891","https://openalex.org/W2733974228","https://openalex.org/W2768261504"],"related_works":["https://openalex.org/W6958248809","https://openalex.org/W4416124665","https://openalex.org/W4411896832","https://openalex.org/W4385935035","https://openalex.org/W4313249138","https://openalex.org/W2360615490","https://openalex.org/W2505127391","https://openalex.org/W3035014940","https://openalex.org/W4403888671","https://openalex.org/W4410717765"],"abstract_inverted_index":{"OBJECTIVES:":[0],"Acinetobacter":[1],"baumannii":[2,53,130,165,185,211],"is":[3,167],"a":[4,22,39,43,187],"major":[5],"cause":[6],"of":[7,25,35,42,51,75,79,87,119,127,179,183,190,208,215,223],"ventilator-associated-pneumonia":[8],"(VAP)":[9],"worldwide":[10],"due":[11],"to":[12,16,21,30,228],"its":[13],"impressive":[14],"propensity":[15],"rapidly":[17],"acquire":[18],"resistance":[19,105],"elements":[20],"wide":[23],"range":[24],"antibacterial":[26],"agents.":[27],"We":[28],"sought":[29],"explore":[31],"the":[32,128,135,141,169,199,206],"genomic":[33],"features":[34],"this":[36,163],"pathogen":[37],"from":[38],"sputum":[40],"specimen":[41],"VAP":[44],"male":[45],"patient.":[46],"METHODS:":[47],"Whole":[48],"genome":[49,85],"analysis":[50,100,123,160,178],"A.":[52,129,164,184,210],"DMS06670":[54,81],"included":[55],"de":[56],"novo":[57],"assembly;":[58],"functional":[59],"annotation,":[60],"whole-genome-phylogenetic":[61],"analysis,":[62],"antibiotics":[63],"genes":[64,106,201],"identification,":[65],"prophage":[66,113],"regions,":[67,114],"virulent":[68,115],"factor":[69],"and":[70,96,156,175,202,218],"pan-genome":[71,188,219],"analysis.":[72,220],"RESULTS:":[73],"Assembly":[74],"whole-genome":[76],"shotgun":[77],"sequences":[78],"strain":[80,131,166],"yielded":[82],"an":[83],"estimated":[84],"size":[86],"3.8":[88],"Mb":[89],"with":[90,134,205],"Sequence":[91],"Type":[92],"447.":[93],"Functional":[94,221],"annotation":[95],"orthologous":[97,120,142],"protein":[98,125,143],"cluster":[99],"identified":[101],"several":[102],"potential":[103],"antibiotic":[104],"was":[107,132],"conducted":[108],"(with":[109],"1":[110],"novel":[111],"gene),":[112],"factors.":[116],"The":[117],"clusters":[118,144],"groups":[121],"(COGs)":[122],"in":[124,157,168],"sequence":[126],"compared":[133,204],"other":[136,209],"five":[137],"genomes":[138,182,207],"showed":[139],"that":[140,162],"responsible":[145],"for":[146],"multi-drug":[147],"exist":[148],"inside":[149],"highly":[150],"antimicrobial":[151],"resistant":[152],"strains.":[153],"Whole-genome":[154],"phylogenetic":[155],"silico":[158],"MLST":[159],"revealed":[161,186],"same":[170],"clade":[171],"as":[172],"strains":[173,212],"LAC-4":[174],"BJAB0715.":[176],"Comparative":[177],"23":[180],"available":[181],"consisting":[189],"15,883":[191],"genes.":[192],"CONCLUSION:":[193],"Our":[194],"findings":[195],"provide":[196],"insight":[197],"into":[198],"virulence-associated":[200],"then":[203],"by":[213],"calculation":[214],"ANI":[216],"values":[217],"studies":[222],"these":[224,230],"pathogens":[225],"are":[226],"required":[227],"validate":[229],"findings.":[231]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":2},{"year":2024,"cited_by_count":3},{"year":2022,"cited_by_count":8},{"year":2021,"cited_by_count":2}],"updated_date":"2026-11-04T10:54:05.112534","created_date":"2020-01-23T00:00:00"}