{"id":"https://openalex.org/W2966733564","doi":"https://doi.org/10.1099/ijsem.0.003627","title":"Pararhodobacter marinus sp. nov., a bacterium isolated from marine sediment in the East China Sea and emended description of the genus Pararhodobacter","display_name":"Pararhodobacter marinus sp. nov., a bacterium isolated from marine sediment in the East China Sea and emended description of the genus Pararhodobacter","publication_year":2019,"publication_date":"2019-08-06","ids":{"openalex":"https://openalex.org/W2966733564","doi":"https://doi.org/10.1099/ijsem.0.003627","mag":"2966733564","pmid":"https://pubmed.ncbi.nlm.nih.gov/31385783"},"language":"en","primary_location":{"id":"doi:10.1099/ijsem.0.003627","doi":"https://doi.org/10.1099/ijsem.0.003627","is_oa":false,"landing_page_url":"https://doi.org/10.1099/ijsem.0.003627","pdf_url":null,"source":{"id":"https://openalex.org/S102181007","display_name":"INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY","issn_l":"1466-5026","issn":["1466-5026","1466-5034"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["cwts-core","dongbi-b","doyens","jufo-1","ki-jl-1","medline","norway-1","poland-70","russia-white-list-3","vabb-shw"],"host_organization":"https://openalex.org/P4310320497","host_organization_name":"Microbiology Society","host_organization_lineage":["https://openalex.org/P4310320497"],"host_organization_lineage_names":["Microbiology Society"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"International Journal of Systematic and Evolutionary Microbiology","raw_type":"journal-article"},"volume":null,"type":"article","is_traditional":true,"indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5086406250","display_name":"Weiyan Zhang","orcid":"https://orcid.org/0000-0003-0436-1658","observed_orcids":["https://orcid.org/0000-0003-0436-1658"]},"institutions":[{"id":"https://openalex.org/I109935558","display_name":"Ningbo University","ror":"https://ror.org/03et85d35","country_code":"CN","type":"education","lineage":["https://openalex.org/I109935558"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Weiyan Zhang","raw_affiliation_strings":["Li Dak Sum Yip Yio Chin Kenneth Li Marine Biopharmaceutical Research Center Ningbo University, Ningbo, 315800, PR China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Li Dak Sum Yip Yio Chin Kenneth Li Marine Biopharmaceutical Research Center Ningbo University, Ningbo, 315800, PR China","institution_ids":["https://openalex.org/I109935558"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100761812","display_name":"Can Chen","orcid":"https://orcid.org/0000-0003-2310-0074","observed_orcids":["https://orcid.org/0000-0003-2310-0074"]},"institutions":[{"id":"https://openalex.org/I76130692","display_name":"Zhejiang University","ror":"https://ror.org/00a2xv884","country_code":"CN","type":"education","lineage":["https://openalex.org/I76130692"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Can Chen","raw_affiliation_strings":["Ocean College, Zhejiang University, Zhoushan, 316021, PR China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Ocean College, Zhejiang University, Zhoushan, 316021, PR China","institution_ids":["https://openalex.org/I76130692"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100706246","display_name":"Ye Yuan","orcid":"https://orcid.org/0000-0002-8576-9016","observed_orcids":["https://orcid.org/0000-0002-8576-9016"]},"institutions":[{"id":"https://openalex.org/I109935558","display_name":"Ningbo University","ror":"https://ror.org/03et85d35","country_code":"CN","type":"education","lineage":["https://openalex.org/I109935558"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Ye Yuan","raw_affiliation_strings":["Li Dak Sum Yip Yio Chin Kenneth Li Marine Biopharmaceutical Research Center Ningbo University, Ningbo, 315800, PR China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Li Dak Sum Yip Yio Chin Kenneth Li Marine Biopharmaceutical Research Center Ningbo University, Ningbo, 315800, PR China","institution_ids":["https://openalex.org/I109935558"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5057772920","display_name":"Dengquan Su","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I109935558","display_name":"Ningbo University","ror":"https://ror.org/03et85d35","country_code":"CN","type":"education","lineage":["https://openalex.org/I109935558"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Dengquan Su","raw_affiliation_strings":["Li Dak Sum Yip Yio Chin Kenneth Li Marine Biopharmaceutical Research Center Ningbo University, Ningbo, 315800, PR China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Li Dak Sum Yip Yio Chin Kenneth Li Marine Biopharmaceutical Research Center Ningbo University, Ningbo, 315800, PR China","institution_ids":["https://openalex.org/I109935558"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5012429750","display_name":"Lijian Ding","orcid":"https://orcid.org/0000-0002-2259-9830","observed_orcids":["https://orcid.org/0000-0002-2259-9830"]},"institutions":[{"id":"https://openalex.org/I109935558","display_name":"Ningbo University","ror":"https://ror.org/03et85d35","country_code":"CN","type":"education","lineage":["https://openalex.org/I109935558"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Lijian Ding","raw_affiliation_strings":["Li Dak Sum Yip Yio Chin Kenneth Li Marine Biopharmaceutical Research Center Ningbo University, Ningbo, 315800, PR China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Li Dak Sum Yip Yio Chin Kenneth Li Marine Biopharmaceutical Research Center Ningbo University, Ningbo, 315800, PR China","institution_ids":["https://openalex.org/I109935558"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5109145790","display_name":"Slava S. Epstein","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I109935558","display_name":"Ningbo University","ror":"https://ror.org/03et85d35","country_code":"CN","type":"education","lineage":["https://openalex.org/I109935558"]},{"id":"https://openalex.org/I12912129","display_name":"Northeastern University","ror":"https://ror.org/04t5xt781","country_code":"US","type":"education","lineage":["https://openalex.org/I12912129"]}],"countries":["CN","US"],"is_corresponding":false,"raw_author_name":"Slava S. Epstein","raw_affiliation_strings":["Department of Biology, Northeastern University, Boston, MA 02115, USA","Li Dak Sum Yip Yio Chin Kenneth Li Marine Biopharmaceutical Research Center Ningbo University, Ningbo, 315800, PR China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biology, Northeastern University, Boston, MA 02115, USA","institution_ids":["https://openalex.org/I12912129"]},{"raw_affiliation_string":"Li Dak Sum Yip Yio Chin Kenneth Li Marine Biopharmaceutical Research Center Ningbo University, Ningbo, 315800, PR China","institution_ids":["https://openalex.org/I109935558"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5071666503","display_name":"Shan He","orcid":"https://orcid.org/0000-0002-0196-7278","observed_orcids":["https://orcid.org/0000-0002-0196-7278"]},"institutions":[{"id":"https://openalex.org/I109935558","display_name":"Ningbo University","ror":"https://ror.org/03et85d35","country_code":"CN","type":"education","lineage":["https://openalex.org/I109935558"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Shan He","raw_affiliation_strings":["Li Dak Sum Yip Yio Chin Kenneth Li Marine Biopharmaceutical Research Center Ningbo University, Ningbo, 315800, PR China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Li Dak Sum Yip Yio Chin Kenneth Li Marine Biopharmaceutical Research Center Ningbo University, Ningbo, 315800, PR China","institution_ids":["https://openalex.org/I109935558"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":3,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":0.9176,"has_fulltext":false,"cited_by_count":5,"citation_normalized_percentile":{"value":0.72090016,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":88,"max":95},"biblio":{"volume":"69","issue":"10","first_page":"3293","last_page":"3298"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11791","display_name":"Microbial Community Ecology and Physiology","score":0.9110999703407288,"subfield":{"id":"https://openalex.org/subfields/2303","display_name":"Ecology"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T11791","display_name":"Microbial Community Ecology and Physiology","score":0.9110999703407288,"subfield":{"id":"https://openalex.org/subfields/2303","display_name":"Ecology"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.04560000076889992,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10765","display_name":"Marine Biology and Ecology Research","score":0.01269999984651804,"subfield":{"id":"https://openalex.org/subfields/1910","display_name":"Oceanography"},"field":{"id":"https://openalex.org/fields/19","display_name":"Earth and Planetary Sciences"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/novel-bacterial-species","display_name":"novel bacterial species","score":0.7210000157356262}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.892916202545166},{"id":"https://openalex.org/C42062724","wikidata":"https://www.wikidata.org/wiki/Q1209205","display_name":"16S ribosomal RNA","level":3,"score":0.8422561883926392},{"id":"https://openalex.org/C193252679","wikidata":"https://www.wikidata.org/wiki/Q242125","display_name":"Phylogenetic tree","level":3,"score":0.6519341468811035},{"id":"https://openalex.org/C523546767","wikidata":"https://www.wikidata.org/wiki/Q10876","display_name":"Bacteria","level":2,"score":0.5521645545959473},{"id":"https://openalex.org/C89423630","wikidata":"https://www.wikidata.org/wiki/Q7193","display_name":"Microbiology","level":1,"score":0.5261078476905823},{"id":"https://openalex.org/C38485361","wikidata":"https://www.wikidata.org/wiki/Q576379","display_name":"Oxidase test","level":3,"score":0.5190632939338684},{"id":"https://openalex.org/C2778022156","wikidata":"https://www.wikidata.org/wiki/Q576145","display_name":"Strain (injury)","level":2,"score":0.48077887296676636},{"id":"https://openalex.org/C22222904","wikidata":"https://www.wikidata.org/wiki/Q422882","display_name":"Glycolipid","level":2,"score":0.45928311347961426},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.38339465856552124},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.2830883860588074},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.2569690942764282},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.15505173802375793},{"id":"https://openalex.org/C181199279","wikidata":"https://www.wikidata.org/wiki/Q8047","display_name":"Enzyme","level":2,"score":0.09916561841964722},{"id":"https://openalex.org/C105702510","wikidata":"https://www.wikidata.org/wiki/Q514","display_name":"Anatomy","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D001482","descriptor_name":"Base Composition","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002681","descriptor_name":"China","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004269","descriptor_name":"DNA, Bacterial","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D005227","descriptor_name":"Fatty Acids","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D006017","descriptor_name":"Glycolipids","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D009693","descriptor_name":"Nucleic Acid Hybridization","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010743","descriptor_name":"Phospholipids","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D010802","descriptor_name":"Phylogeny","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012336","descriptor_name":"RNA, Ribosomal, 16S","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012623","descriptor_name":"Seawater","qualifier_ui":"Q000382","qualifier_name":"microbiology","is_major_topic":true},{"descriptor_ui":"D014451","descriptor_name":"Ubiquinone","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D015373","descriptor_name":"Bacterial Typing Techniques","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019015","descriptor_name":"Geologic Sediments","qualifier_ui":"Q000382","qualifier_name":"microbiology","is_major_topic":true},{"descriptor_ui":"D041902","descriptor_name":"Rhodobacteraceae","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":true},{"descriptor_ui":"D041902","descriptor_name":"Rhodobacteraceae","qualifier_ui":"Q000302","qualifier_name":"isolation & purification","is_major_topic":false}],"locations_count":2,"locations":[{"id":"doi:10.1099/ijsem.0.003627","doi":"https://doi.org/10.1099/ijsem.0.003627","is_oa":false,"landing_page_url":"https://doi.org/10.1099/ijsem.0.003627","pdf_url":null,"source":{"id":"https://openalex.org/S102181007","display_name":"INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY","issn_l":"1466-5026","issn":["1466-5026","1466-5034"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["cwts-core","dongbi-b","doyens","jufo-1","ki-jl-1","medline","norway-1","poland-70","russia-white-list-3","vabb-shw"],"host_organization":"https://openalex.org/P4310320497","host_organization_name":"Microbiology Society","host_organization_lineage":["https://openalex.org/P4310320497"],"host_organization_lineage_names":["Microbiology Society"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"International Journal of Systematic and Evolutionary Microbiology","raw_type":"journal-article"},{"id":"pmid:31385783","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/31385783","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"International journal of systematic and evolutionary microbiology","raw_type":"Journal Article"}],"best_oa_location":null,"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/14","display_name":"Life below water","score":1.0}],"study_designs":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":16,"referenced_works":["https://openalex.org/W1933843165","https://openalex.org/W2022474808","https://openalex.org/W2038401409","https://openalex.org/W2065461553","https://openalex.org/W2096404721","https://openalex.org/W2097706568","https://openalex.org/W2102424972","https://openalex.org/W2116206245","https://openalex.org/W2119888547","https://openalex.org/W2127036970","https://openalex.org/W2139760555","https://openalex.org/W2163892779","https://openalex.org/W2311203695","https://openalex.org/W2579533542","https://openalex.org/W2588775853","https://openalex.org/W2755796336"],"related_works":["https://openalex.org/W2912511913","https://openalex.org/W2907310294","https://openalex.org/W3156942924","https://openalex.org/W2006437100","https://openalex.org/W2980856945","https://openalex.org/W2567890346","https://openalex.org/W2128526679","https://openalex.org/W2804019406","https://openalex.org/W4378195356","https://openalex.org/W4406864090"],"abstract_inverted_index":{"A":[0],"Gram-negative,":[1],"rod-shaped,":[2],"non-motile":[3],"and":[4,38,42,56,68,86,116,139,157,180,200,233],"strictly":[5],"aerobic":[6],"bacterium,":[7],"designated":[8],"ZQ420T,":[9],"was":[10,27,93,124,204],"isolated":[11],"from":[12],"marine":[13],"sediment":[14],"sampled":[15],"on":[16],"Zhoushan":[17],"Island":[18],"located":[19],"in":[20,188,208,245],"the":[21,94,144,189,227,246,252],"East":[22],"China":[23],"Sea.":[24],"Strain":[25],"ZQ420T":[26,135,179,199,216,237,264],"able":[28],"to":[29,128,143,170,240],"grow":[30],"at":[31],"10\u201345":[32],"\u00b0C,":[33],"0\u201312.0":[34],"%":[35,141,219],"(w/v)":[36],"NaCl":[37],"pH":[39],"5.5\u20139.0.":[40],"Catalase":[41],"oxidase":[43],"activities,":[44],"nitrate":[45],"reduction,":[46],"H2S":[47],"production,":[48],"hydrolysis":[49,65],"of":[50,66,103,229],"starch,":[51],"casein,":[52],"Tween":[53,69],"20,":[54],"40":[55],"80":[57],"were":[58,71,78],"positive.":[59],"Indole,":[60],"methyl":[61],"red,":[62],"Voges\u2013Proskauer":[63],"test,":[64],"gelatin":[67],"60":[70],"negative.":[72],"The":[73,99,120,192,207,260],"major":[74],"cellular":[75],"fatty":[76],"acids":[77],"C18":[79,88],":":[80,84,89],"1":[81],"\u03c97c,":[82],"C16":[83],"0":[85],"11-methyl":[87],"1\u03c97c.":[90],"Ubiquinone-10":[91],"(Q-10)":[92],"only":[95],"detected":[96],"respiratory":[97],"quinone.":[98],"polar":[100],"lipids":[101],"consisted":[102],"diphosphatidylglycerol,":[104],"phosphatidylethanolamine,":[105],"phosphatidylglycerol,":[106],"three":[107,110],"unidentified":[108,111,114,118],"phospholipids,":[109],"glycolipids,":[112],"two":[113,117],"aminolipid":[115],"lipids.":[119],"DNA":[121,220],"G+C":[122],"content":[123],"64.8":[125],"mol%.":[126],"According":[127],"16S":[129],"rRNA":[130],"gene":[131],"sequence":[132,166],"similarities,":[133],"strain":[134,178,198,215,236,262],"shared":[136,217],"97.9,":[137],"96.3":[138,140],"similarities":[142,167],"following":[145],"species":[146,244],"with":[147,222],"validated":[148],"names":[149],"Pararhodobacter":[150,248,254],"aggregans":[151,182,202,224],"D1-19T,":[152],"Pseudo":[153,158],"rhodobacter":[154,159],"psychrotolerans":[155],"PAMC27389T":[156],"collinsensis":[160],"4-T-34T,":[161],"respectively.":[162],"While":[163],"sharing":[164],"lower":[165],"(<96.0":[168],"%)":[169],"other":[171],"type":[172,261],"species.":[173],"Phylogenetic":[174],"analyses":[175],"showed":[176],"that":[177,214],"P.":[181,201,223],"D1-19T":[183,203],"formed":[184],"an":[185],"independent":[186],"cluster":[187],"phylogenetic":[190],"trees.":[191],"average":[193],"nucleotide":[194],"identity":[195],"value":[196],"between":[197],"79.1":[205],"%.":[206],"silico":[209],"DNA\u2013DNA":[210],"hybridization":[211],"analysis":[212],"revealed":[213],"21.5":[218],"relatedness":[221],"D1-19T.":[225],"On":[226],"basis":[228],"its":[230],"phenotypic,":[231],"chemotaxonomic":[232],"genotypic":[234],"characteristics,":[235],"is":[238,258,263],"considered":[239],"represent":[241],"a":[242],"novel":[243],"genus":[247],",":[249],"for":[250],"which":[251],"name":[253],"marinus":[255],"sp.":[256],"nov.":[257],"proposed.":[259],"(=KCTC":[265],"62579T=MCCC":[266],"1K03530T).":[267]},"counts_by_year":[{"year":2025,"cited_by_count":2},{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":2}],"updated_date":"2026-11-12T12:28:57.059296","created_date":"2019-08-13T00:00:00"}