{"id":"https://openalex.org/W2966197857","doi":"https://doi.org/10.1111/jph.12821","title":"Genetic diversity of hop stunt viroid from symptomatic and asymptomatic citrus trees in Iran","display_name":"Genetic diversity of hop stunt viroid from symptomatic and asymptomatic citrus trees in Iran","publication_year":2019,"publication_date":"2019-06-05","ids":{"openalex":"https://openalex.org/W2966197857","doi":"https://doi.org/10.1111/jph.12821","mag":"2966197857"},"language":"en","primary_location":{"id":"doi:10.1111/jph.12821","doi":"https://doi.org/10.1111/jph.12821","is_oa":false,"landing_page_url":"https://doi.org/10.1111/jph.12821","pdf_url":null,"source":{"id":"https://openalex.org/S14509825","display_name":"Journal of Phytopathology","issn_l":"0931-1785","issn":["0931-1785","1439-0434"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["cwts-core","dongbi-d","jufo-1","norway-1","poland-40","russia-white-list-2"],"host_organization":"https://openalex.org/P4310320595","host_organization_name":"Wiley","host_organization_lineage":["https://openalex.org/P4310320595"],"host_organization_lineage_names":["Wiley"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Phytopathology","raw_type":"journal-article"},"volume":null,"type":"article","is_traditional":true,"indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5082826059","display_name":"Ramtin Vamenani","orcid":"https://orcid.org/0000-0003-1642-3385","observed_orcids":["https://orcid.org/0000-0003-1642-3385"]},"institutions":[{"id":"https://openalex.org/I184896493","display_name":"Sari Agricultural Sciences and Natural Resources University","ror":"https://ror.org/0284vkq26","country_code":"IR","type":"education","lineage":["https://openalex.org/I184896493"]}],"countries":["IR"],"is_corresponding":false,"raw_author_name":"Ramtin Vamenani","raw_affiliation_strings":["Sari Agricultural Sciences and Natural Resources University, Mazandaran, Iran"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Sari Agricultural Sciences and Natural Resources University, Mazandaran, Iran","institution_ids":["https://openalex.org/I184896493"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5050245166","display_name":"Heshmatolah Rahimian","orcid":"https://orcid.org/0000-0002-6366-9188","observed_orcids":["https://orcid.org/0000-0002-6366-9188"]},"institutions":[{"id":"https://openalex.org/I184896493","display_name":"Sari Agricultural Sciences and Natural Resources University","ror":"https://ror.org/0284vkq26","country_code":"IR","type":"education","lineage":["https://openalex.org/I184896493"]}],"countries":["IR"],"is_corresponding":false,"raw_author_name":"Heshmatollah Rahimian","raw_affiliation_strings":["Sari Agricultural Sciences and Natural Resources University, Mazandaran, Iran"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Sari Agricultural Sciences and Natural Resources University, Mazandaran, Iran","institution_ids":["https://openalex.org/I184896493"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Seyyed Mohammad Alavi","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I184896493","display_name":"Sari Agricultural Sciences and Natural Resources University","ror":"https://ror.org/0284vkq26","country_code":"IR","type":"education","lineage":["https://openalex.org/I184896493"]},{"id":"https://openalex.org/I4871159","display_name":"University of Mazandaran","ror":"https://ror.org/05fp9g671","country_code":"IR","type":"education","lineage":["https://openalex.org/I4871159"]}],"countries":["IR"],"is_corresponding":false,"raw_author_name":"Seyyed Mohammad Alavi","raw_affiliation_strings":["Genetics and Agricultural Biotechnology Institute of Tabarestan, Sari Agricultural Sciences and Natural Resources University, Mazandaran, Iran"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Genetics and Agricultural Biotechnology Institute of Tabarestan, Sari Agricultural Sciences and Natural Resources University, Mazandaran, Iran","institution_ids":["https://openalex.org/I184896493","https://openalex.org/I4871159"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5033336695","display_name":"Ali Pakdin\u2010Parizi","orcid":"https://orcid.org/0000-0003-4570-8021","observed_orcids":["https://orcid.org/0000-0003-4570-8021"]},"institutions":[{"id":"https://openalex.org/I184896493","display_name":"Sari Agricultural Sciences and Natural Resources University","ror":"https://ror.org/0284vkq26","country_code":"IR","type":"education","lineage":["https://openalex.org/I184896493"]},{"id":"https://openalex.org/I4871159","display_name":"University of Mazandaran","ror":"https://ror.org/05fp9g671","country_code":"IR","type":"education","lineage":["https://openalex.org/I4871159"]}],"countries":["IR"],"is_corresponding":false,"raw_author_name":"Ali Pakdin Parizi","raw_affiliation_strings":["Genetics and Agricultural Biotechnology Institute of Tabarestan, Sari Agricultural Sciences and Natural Resources University, Mazandaran, Iran"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Genetics and Agricultural Biotechnology Institute of Tabarestan, Sari Agricultural Sciences and Natural Resources University, Mazandaran, Iran","institution_ids":["https://openalex.org/I184896493","https://openalex.org/I4871159"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5051040860","display_name":"Tarlan Mirza Razzaz","orcid":"https://orcid.org/0000-0003-2282-7108","observed_orcids":["https://orcid.org/0000-0003-2282-7108"]},"institutions":[{"id":"https://openalex.org/I110525433","display_name":"Islamic Azad University, Tehran","ror":"https://ror.org/01kzn7k21","country_code":"IR","type":"education","lineage":["https://openalex.org/I110525433"]},{"id":"https://openalex.org/I2800744764","display_name":"Islamic Azad University Medical Branch of Tehran","ror":"https://ror.org/00eaebe27","country_code":"IR","type":"education","lineage":["https://openalex.org/I110525433","https://openalex.org/I2800744764"]}],"countries":["IR"],"is_corresponding":true,"raw_author_name":"Tarlan Mirza Razzaz","raw_affiliation_strings":["Medical Sciences Branch, Islamic Azad University, Tehran, Iran"],"raw_orcid":"https://orcid.org/0000-0003-2282-7108","affiliations":[{"raw_affiliation_string":"Medical Sciences Branch, Islamic Azad University, Tehran, Iran","institution_ids":["https://openalex.org/I110525433","https://openalex.org/I2800744764"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5051040860"],"corresponding_institution_ids":["https://openalex.org/I110525433","https://openalex.org/I2800744764"],"apc_list":{"value":2900,"currency":"USD","value_usd":2900},"apc_paid":null,"fwci":0.7273,"has_fulltext":false,"cited_by_count":9,"citation_normalized_percentile":{"value":0.70371105,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":88,"max":96},"biblio":{"volume":"167","issue":"9","first_page":"484","last_page":"489"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10494","display_name":"Plant Virus Research Studies","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10494","display_name":"Plant Virus Research Studies","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11750","display_name":"Phytoplasmas and Hemiptera pathogens","score":0.00039999998989515007,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T13220","display_name":"Plant and Fungal Interactions Research","score":0.0,"subfield":{"id":"https://openalex.org/subfields/2406","display_name":"Virology"},"field":{"id":"https://openalex.org/fields/24","display_name":"Immunology and Microbiology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/hop-stunt-viroid","display_name":"Hop stunt viroid","score":0.9580000042915344},{"id":"https://openalex.org/keywords/citrus-varieties","display_name":"citrus cultivars","score":0.5540000200271606},{"id":"https://openalex.org/keywords/viroid-detection","display_name":"viroid detection","score":0.6439999938011169},{"id":"https://openalex.org/keywords/mazandaran-province","display_name":"Mazandaran","score":0.765999972820282}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.8152536153793335},{"id":"https://openalex.org/C81977670","wikidata":"https://www.wikidata.org/wiki/Q585259","display_name":"Genetic diversity","level":3,"score":0.6529467105865479},{"id":"https://openalex.org/C197321923","wikidata":"https://www.wikidata.org/wiki/Q4886","display_name":"Cultivar","level":2,"score":0.5783956050872803},{"id":"https://openalex.org/C83082669","wikidata":"https://www.wikidata.org/wiki/Q39338","display_name":"Orange (colour)","level":2,"score":0.5429602861404419},{"id":"https://openalex.org/C144027150","wikidata":"https://www.wikidata.org/wiki/Q48803","display_name":"Horticulture","level":1,"score":0.5207917094230652},{"id":"https://openalex.org/C129219603","wikidata":"https://www.wikidata.org/wiki/Q1788683","display_name":"Single-strand conformation polymorphism","level":4,"score":0.49845218658447266},{"id":"https://openalex.org/C2780781446","wikidata":"https://www.wikidata.org/wiki/Q209917","display_name":"Viroid","level":4,"score":0.4174157381057739},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.3457944691181183},{"id":"https://openalex.org/C49105822","wikidata":"https://www.wikidata.org/wiki/Q176996","display_name":"Polymerase chain reaction","level":3,"score":0.23296049237251282},{"id":"https://openalex.org/C159047783","wikidata":"https://www.wikidata.org/wiki/Q7215","display_name":"Virology","level":1,"score":0.22442442178726196},{"id":"https://openalex.org/C109110057","wikidata":"https://www.wikidata.org/wiki/Q1495434","display_name":"Plant virus","level":3,"score":0.20115205645561218},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.14422297477722168},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.12127554416656494},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.10184270143508911},{"id":"https://openalex.org/C2522874641","wikidata":"https://www.wikidata.org/wiki/Q808","display_name":"Virus","level":2,"score":0.09044691920280457},{"id":"https://openalex.org/C2908647359","wikidata":"https://www.wikidata.org/wiki/Q2625603","display_name":"Population","level":2,"score":0.057374268770217896},{"id":"https://openalex.org/C99454951","wikidata":"https://www.wikidata.org/wiki/Q932068","display_name":"Environmental health","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1111/jph.12821","doi":"https://doi.org/10.1111/jph.12821","is_oa":false,"landing_page_url":"https://doi.org/10.1111/jph.12821","pdf_url":null,"source":{"id":"https://openalex.org/S14509825","display_name":"Journal of Phytopathology","issn_l":"0931-1785","issn":["0931-1785","1439-0434"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["cwts-core","dongbi-d","jufo-1","norway-1","poland-40","russia-white-list-2"],"host_organization":"https://openalex.org/P4310320595","host_organization_name":"Wiley","host_organization_lineage":["https://openalex.org/P4310320595"],"host_organization_lineage_names":["Wiley"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Phytopathology","raw_type":"journal-article"}],"best_oa_location":null,"sustainable_development_goals":[{"display_name":"Zero hunger","score":0.9208999872207642,"id":"https://metadata.un.org/sdg/2"},{"display_name":"Good health and well-being","score":0.5683000087738037,"id":"https://metadata.un.org/sdg/3"}],"study_designs":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":24,"referenced_works":["https://openalex.org/W1525734744","https://openalex.org/W1537086053","https://openalex.org/W1554954226","https://openalex.org/W1800549576","https://openalex.org/W1843573189","https://openalex.org/W1971199253","https://openalex.org/W1975767456","https://openalex.org/W2014764792","https://openalex.org/W2023159646","https://openalex.org/W2032776824","https://openalex.org/W2047307159","https://openalex.org/W2054498995","https://openalex.org/W2070840145","https://openalex.org/W2071235278","https://openalex.org/W2074472036","https://openalex.org/W2097382368","https://openalex.org/W2123092827","https://openalex.org/W2141157874","https://openalex.org/W2145086415","https://openalex.org/W2171698940","https://openalex.org/W2297185644","https://openalex.org/W2317248079","https://openalex.org/W2326204164","https://openalex.org/W4242530041"],"related_works":["https://openalex.org/W2478523061","https://openalex.org/W1497736315","https://openalex.org/W4324061695","https://openalex.org/W2069410137","https://openalex.org/W3034931429","https://openalex.org/W7209614332","https://openalex.org/W1963845534","https://openalex.org/W4400452418","https://openalex.org/W2112511341","https://openalex.org/W6888915659"],"abstract_inverted_index":{"Abstract":[0],"Hop":[1],"stunt":[2],"viroid":[3,62],"as":[4,27,132],"the":[5,100,167,174],"causal":[6],"agent":[7],"of":[8,60,66,102,110,115,121,130,138,143,149,151],"cachexia":[9,22],"disease":[10,30],"has":[11,23],"detected":[12],"from":[13,71],"citrus":[14,32,54,75],"trees":[15],"in":[16,19,63,77,104],"different":[17,52,160],"areas":[18],"Iran.":[20,67],"Although":[21],"not":[24],"been":[25],"reported":[26],"a":[28],"decline":[29],"for":[31,85],"trees,":[33,157],"it":[34],"can":[35],"impair":[36],"crop":[37],"quality":[38],"and":[39,56,73,89,123,145,155],"reduce":[40],"plant":[41],"yields.":[42],"This":[43],"study":[44],"was":[45,69],"undertaken":[46],"to":[47,93],"molecularly":[48],"detect":[49],"HSVd":[50,80,95,103,161],"among":[51,170],"commercial":[53],"cultivars":[55,76],"determine":[57],"genetic":[58,96],"diversity":[59],"this":[61],"Mazandaran":[64,78],"province":[65],"Sampling":[68],"performed":[70],"symptomatic":[72,106],"symptomless":[74],"province.":[79],"specific":[81],"primers":[82],"were":[83,91,163],"used":[84],"molecular":[86],"detection.":[87],"SSCP":[88,168],"sequencing":[90,166],"applied":[92],"assay":[94],"diversity.":[97],"Results":[98],"showed":[99],"detection":[101],"all":[105],"Satsuma":[107],"(25":[108,113],"out":[109,114,120,129,137,142,148],"25),":[111,116],"Clementine":[112],"sweet":[117,124],"lime":[118],"(20":[119],"20)":[122],"orange":[125],"cv.":[126],"Valencia":[127],"(7":[128],"7),":[131],"well":[133],"as,":[134],"31%":[135],"(14":[136],"22),":[139],"100%":[140],"(12":[141],"12)":[144],"33%":[146],"(5":[147],"15)":[150],"page":[152],"mandarin,":[153],"lemon":[154],"grapefruit":[156],"respectively.":[158],"10":[159],"genomes":[162],"identified":[164],"by":[165],"profiles":[169],"which":[171],"HSVd\u2010IR1":[172],"had":[173],"most":[175],"frequency.":[176]},"counts_by_year":[{"year":2026,"cited_by_count":2},{"year":2025,"cited_by_count":1},{"year":2023,"cited_by_count":2},{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":2},{"year":2020,"cited_by_count":1}],"updated_date":"2026-11-04T10:54:05.112534","created_date":"2019-08-13T00:00:00"}
