{"id":"https://openalex.org/W2965524832","doi":"https://doi.org/10.1093/pcp/pcz152","title":"Shotgun Proteomic Analysis Highlights the Roles of Long-Lived mRNAs and De Novo Transcribed mRNAs in Rice Seeds upon Imbibition","display_name":"Shotgun Proteomic Analysis Highlights the Roles of Long-Lived mRNAs and De Novo Transcribed mRNAs in Rice Seeds upon Imbibition","publication_year":2019,"publication_date":"2019-07-31","ids":{"openalex":"https://openalex.org/W2965524832","doi":"https://doi.org/10.1093/pcp/pcz152","mag":"2965524832","pmid":"https://pubmed.ncbi.nlm.nih.gov/31373371"},"language":"en","primary_location":{"id":"doi:10.1093/pcp/pcz152","doi":"https://doi.org/10.1093/pcp/pcz152","is_oa":true,"landing_page_url":"https://doi.org/10.1093/pcp/pcz152","pdf_url":"https://academic.oup.com/pcp/article-pdf/60/11/2584/30490108/pcz152.pdf","source":{"id":"https://openalex.org/S110997964","display_name":"Plant and Cell Physiology","issn_l":"0032-0781","issn":["0032-0781","1471-9053"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["cwts-core","dongbi-c","jufo-2","ki-jl-2","medline","norway-2","poland-140","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Plant and Cell Physiology","raw_type":"journal-article"},"volume":null,"type":"article","is_traditional":true,"indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/pcp/article-pdf/60/11/2584/30490108/pcz152.pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5043301880","display_name":"Naoto Sano","orcid":"https://orcid.org/0000-0003-2626-4699","observed_orcids":["https://orcid.org/0000-0003-2626-4699"]},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I22248866","display_name":"AgroParisTech","ror":"https://ror.org/02kbmgc12","country_code":"FR","type":"education","lineage":["https://openalex.org/I22248866","https://openalex.org/I277688954"]},{"id":"https://openalex.org/I4210107368","display_name":"Institut Jean-Pierre Bourgin","ror":"https://ror.org/01wqd6v19","country_code":"FR","type":"facility","lineage":["https://openalex.org/I22248866","https://openalex.org/I277688954","https://openalex.org/I4210088668","https://openalex.org/I4210107368"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Naoto Sano","raw_affiliation_strings":["Institut Jean-Pierre Bourgin, INRA, AgroParisTech, CNRS, Universit\u00ef\u00bf\u00bd Paris-Saclay, Versailles, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institut Jean-Pierre Bourgin, INRA, AgroParisTech, CNRS, Universit\u00ef\u00bf\u00bd Paris-Saclay, Versailles, France","institution_ids":["https://openalex.org/I1294671590","https://openalex.org/I22248866","https://openalex.org/I4210107368"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5089857568","display_name":"Yumiko Takebayashi","orcid":"https://orcid.org/0000-0003-4207-297X","observed_orcids":["https://orcid.org/0000-0003-4207-297X"]},"institutions":[{"id":"https://openalex.org/I4210100240","display_name":"RIKEN Center for Sustainable Resource Science","ror":"https://ror.org/010rf2m76","country_code":"JP","type":"facility","lineage":["https://openalex.org/I4210100240","https://openalex.org/I4210110652"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Yumiko Takebayashi","raw_affiliation_strings":["RIKEN Center for Sustainable Resource Science, Yokohama, Kanagawa, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"RIKEN Center for Sustainable Resource Science, Yokohama, Kanagawa, Japan","institution_ids":["https://openalex.org/I4210100240"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5079769656","display_name":"Alexandra To","orcid":"https://orcid.org/0000-0002-0204-4045","observed_orcids":["https://orcid.org/0000-0002-0204-4045"]},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I22248866","display_name":"AgroParisTech","ror":"https://ror.org/02kbmgc12","country_code":"FR","type":"education","lineage":["https://openalex.org/I22248866","https://openalex.org/I277688954"]},{"id":"https://openalex.org/I4210107368","display_name":"Institut Jean-Pierre Bourgin","ror":"https://ror.org/01wqd6v19","country_code":"FR","type":"facility","lineage":["https://openalex.org/I22248866","https://openalex.org/I277688954","https://openalex.org/I4210088668","https://openalex.org/I4210107368"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Alexandra To","raw_affiliation_strings":["Institut Jean-Pierre Bourgin, INRA, AgroParisTech, CNRS, Universit\u00ef\u00bf\u00bd Paris-Saclay, Versailles, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institut Jean-Pierre Bourgin, INRA, AgroParisTech, CNRS, Universit\u00ef\u00bf\u00bd Paris-Saclay, Versailles, France","institution_ids":["https://openalex.org/I1294671590","https://openalex.org/I22248866","https://openalex.org/I4210107368"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5025254636","display_name":"Corinne Mhiri","orcid":"https://orcid.org/0000-0002-1377-6604","observed_orcids":["https://orcid.org/0000-0002-1377-6604"]},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I22248866","display_name":"AgroParisTech","ror":"https://ror.org/02kbmgc12","country_code":"FR","type":"education","lineage":["https://openalex.org/I22248866","https://openalex.org/I277688954"]},{"id":"https://openalex.org/I4210107368","display_name":"Institut Jean-Pierre Bourgin","ror":"https://ror.org/01wqd6v19","country_code":"FR","type":"facility","lineage":["https://openalex.org/I22248866","https://openalex.org/I277688954","https://openalex.org/I4210088668","https://openalex.org/I4210107368"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Corinne Mhiri","raw_affiliation_strings":["Institut Jean-Pierre Bourgin, INRA, AgroParisTech, CNRS, Universit\u00ef\u00bf\u00bd Paris-Saclay, Versailles, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institut Jean-Pierre Bourgin, INRA, AgroParisTech, CNRS, Universit\u00ef\u00bf\u00bd Paris-Saclay, Versailles, France","institution_ids":["https://openalex.org/I1294671590","https://openalex.org/I22248866","https://openalex.org/I4210107368"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5006341320","display_name":"Lo\u00efc Rajjou","orcid":"https://orcid.org/0000-0001-9739-1041","observed_orcids":["https://orcid.org/0000-0001-9739-1041"]},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I22248866","display_name":"AgroParisTech","ror":"https://ror.org/02kbmgc12","country_code":"FR","type":"education","lineage":["https://openalex.org/I22248866","https://openalex.org/I277688954"]},{"id":"https://openalex.org/I4210107368","display_name":"Institut Jean-Pierre Bourgin","ror":"https://ror.org/01wqd6v19","country_code":"FR","type":"facility","lineage":["https://openalex.org/I22248866","https://openalex.org/I277688954","https://openalex.org/I4210088668","https://openalex.org/I4210107368"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Lo\u00ef\u00bf\u00bdc Rajjou","raw_affiliation_strings":["Institut Jean-Pierre Bourgin, INRA, AgroParisTech, CNRS, Universit\u00ef\u00bf\u00bd Paris-Saclay, Versailles, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institut Jean-Pierre Bourgin, INRA, AgroParisTech, CNRS, Universit\u00ef\u00bf\u00bd Paris-Saclay, Versailles, France","institution_ids":["https://openalex.org/I1294671590","https://openalex.org/I22248866","https://openalex.org/I4210107368"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5051468848","display_name":"Hirofumi Nakagami","orcid":"https://orcid.org/0000-0003-2569-7062","observed_orcids":["https://orcid.org/0000-0003-2569-7062"]},"institutions":[{"id":"https://openalex.org/I4210100240","display_name":"RIKEN Center for Sustainable Resource Science","ror":"https://ror.org/010rf2m76","country_code":"JP","type":"facility","lineage":["https://openalex.org/I4210100240","https://openalex.org/I4210110652"]},{"id":"https://openalex.org/I4210141639","display_name":"Max Planck Institute for Plant Breeding Research","ror":"https://ror.org/044g3zk14","country_code":"DE","type":"facility","lineage":["https://openalex.org/I149899117","https://openalex.org/I4210141639"]}],"countries":["DE","JP"],"is_corresponding":true,"raw_author_name":"Hirofumi Nakagami","raw_affiliation_strings":["Max Planck Institute for Plant Breeding Research, Carl-von-Linne-Weg 10, Cologne, Germany","RIKEN Center for Sustainable Resource Science, Yokohama, Kanagawa, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Max Planck Institute for Plant Breeding Research, Carl-von-Linne-Weg 10, Cologne, Germany","institution_ids":["https://openalex.org/I4210141639"]},{"raw_affiliation_string":"RIKEN Center for Sustainable Resource Science, Yokohama, Kanagawa, Japan","institution_ids":["https://openalex.org/I4210100240"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5082940342","display_name":"Motoki Kanekatsu","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I92614990","display_name":"Tokyo University of Agriculture and Technology","ror":"https://ror.org/00qg0kr10","country_code":"JP","type":"education","lineage":["https://openalex.org/I92614990"]}],"countries":["JP"],"is_corresponding":true,"raw_author_name":"Motoki Kanekatsu","raw_affiliation_strings":["Department of Plant Production, United Graduate School of Agricultural Science, Tokyo University of Agriculture and Technology, Fuchu, Tokyo, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Plant Production, United Graduate School of Agricultural Science, Tokyo University of Agriculture and Technology, Fuchu, Tokyo, Japan","institution_ids":["https://openalex.org/I92614990"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5051468848","https://openalex.org/A5082940342"],"corresponding_institution_ids":["https://openalex.org/I4210100240","https://openalex.org/I4210141639","https://openalex.org/I92614990"],"apc_list":{"value":3085,"currency":"USD","value_usd":3085},"apc_paid":null,"fwci":2.3704,"has_fulltext":true,"cited_by_count":27,"citation_normalized_percentile":{"value":0.8762101,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":88,"max":98},"biblio":{"volume":"60","issue":"11","first_page":"2584","last_page":"2596"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11098","display_name":"Seed Germination and Physiology","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11098","display_name":"Seed Germination and Physiology","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10184","display_name":"Plant Molecular Biology Research","score":9.999999747378752e-05,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10519","display_name":"Advanced Proteomics Techniques and Applications","score":0.0,"subfield":{"id":"https://openalex.org/subfields/1607","display_name":"Spectroscopy"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/rice-seed-germination","display_name":"rice seed germination","score":0.8240000009536743},{"id":"https://openalex.org/keywords/de-novo-transcription","display_name":"de novo transcription","score":0.9490000009536743},{"id":"https://openalex.org/keywords/seed-imbibition","display_name":"seed imbibition","score":0.8309999704360962},{"id":"https://openalex.org/keywords/alpha-amanitin","display_name":"alpha-amanitin","score":0.8640000224113464},{"id":"https://openalex.org/keywords/transcriptional-inhibition","display_name":"transcriptional inhibition","score":0.5649999976158142},{"id":"https://openalex.org/keywords/glycolysis","display_name":"glycolysis","score":0.7390000224113464},{"id":"https://openalex.org/keywords/pyruvate-metabolism","display_name":"pyruvate metabolism","score":0.8999999761581421},{"id":"https://openalex.org/keywords/tricarboxylic-acid-cycle","display_name":"TCA cycle","score":0.9990000128746033},{"id":"https://openalex.org/keywords/energy-metabolism","display_name":"energy metabolism","score":0.5360000133514404},{"id":"https://openalex.org/keywords/translational-machinery","display_name":"translation machinery","score":0.5350000262260437}],"concepts":[{"id":"https://openalex.org/C2778409621","wikidata":"https://www.wikidata.org/wiki/Q1659781","display_name":"Imbibition","level":3,"score":0.8303717970848083},{"id":"https://openalex.org/C104397665","wikidata":"https://www.wikidata.org/wiki/Q860947","display_name":"Proteome","level":2,"score":0.763129472732544},{"id":"https://openalex.org/C152724338","wikidata":"https://www.wikidata.org/wiki/Q909442","display_name":"KEGG","level":5,"score":0.6798814535140991},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.6789465546607971},{"id":"https://openalex.org/C162317418","wikidata":"https://www.wikidata.org/wiki/Q252857","display_name":"Transcriptome","level":4,"score":0.5596625804901123},{"id":"https://openalex.org/C95444343","wikidata":"https://www.wikidata.org/wiki/Q7141","display_name":"Cell biology","level":1,"score":0.5054848194122314},{"id":"https://openalex.org/C86339819","wikidata":"https://www.wikidata.org/wiki/Q407384","display_name":"Transcription factor","level":3,"score":0.5040232539176941},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.4820888340473175},{"id":"https://openalex.org/C179926584","wikidata":"https://www.wikidata.org/wiki/Q207714","display_name":"Transcription (linguistics)","level":2,"score":0.4666362404823303},{"id":"https://openalex.org/C100701293","wikidata":"https://www.wikidata.org/wiki/Q193838","display_name":"Germination","level":2,"score":0.4490278363227844},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.4216671884059906},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.3401276469230652},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.18233367800712585},{"id":"https://openalex.org/C41895202","wikidata":"https://www.wikidata.org/wiki/Q8162","display_name":"Linguistics","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D012275","descriptor_name":"Oryza","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D012333","descriptor_name":"RNA, Messenger","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D012639","descriptor_name":"Seeds","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D018525","descriptor_name":"Germination","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D040901","descriptor_name":"Proteomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D053959","descriptor_name":"Alpha-Amanitin","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1093/pcp/pcz152","doi":"https://doi.org/10.1093/pcp/pcz152","is_oa":true,"landing_page_url":"https://doi.org/10.1093/pcp/pcz152","pdf_url":"https://academic.oup.com/pcp/article-pdf/60/11/2584/30490108/pcz152.pdf","source":{"id":"https://openalex.org/S110997964","display_name":"Plant and Cell Physiology","issn_l":"0032-0781","issn":["0032-0781","1471-9053"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["cwts-core","dongbi-c","jufo-2","ki-jl-2","medline","norway-2","poland-140","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Plant and Cell Physiology","raw_type":"journal-article"},{"id":"pmid:31373371","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/31373371","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Plant & cell physiology","raw_type":"Journal Article"},{"id":"pmh:oai:HAL:hal-04500776v1","doi":null,"is_oa":false,"landing_page_url":"https://hal.inrae.fr/hal-04500776","pdf_url":null,"source":{"id":"https://openalex.org/S4306402512","display_name":"HAL","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I4405252976","host_organization_name":"Centre pour la Communication Scientifique Directe","host_organization_lineage":["https://openalex.org/I4405252976"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Plant and Cell Physiology, 2019, 60 (11), pp.2584-2596. ⟨10.1093/pcp/pcz152⟩","raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:pure.mpg.de:item_3166883","doi":null,"is_oa":false,"landing_page_url":"http://hdl.handle.net/21.11116/0000-0004-C3A6-4","pdf_url":null,"source":{"id":"https://openalex.org/S4306400654","display_name":"MPG.PuRe (Max Planck Society)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I149899117","host_organization_name":"Max Planck Society","host_organization_lineage":["https://openalex.org/I149899117"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Plant and Cell Physiology","raw_type":"info:eu-repo/semantics/article"}],"best_oa_location":{"id":"doi:10.1093/pcp/pcz152","doi":"https://doi.org/10.1093/pcp/pcz152","is_oa":true,"landing_page_url":"https://doi.org/10.1093/pcp/pcz152","pdf_url":"https://academic.oup.com/pcp/article-pdf/60/11/2584/30490108/pcz152.pdf","source":{"id":"https://openalex.org/S110997964","display_name":"Plant and Cell Physiology","issn_l":"0032-0781","issn":["0032-0781","1471-9053"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["cwts-core","dongbi-c","jufo-2","ki-jl-2","medline","norway-2","poland-140","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Plant and Cell Physiology","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/2","score":0.5365999937057495,"display_name":"Zero hunger"}],"study_designs":[],"awards":[{"id":"https://openalex.org/G1629930716","display_name":"\u3073\u308f\u6e56\u306e\u6c34\u4f4d\u4f4e\u4e0b\u3068\u6c5a\u67d3\u304c\u3082\u305f\u3089\u3059\u6c34\u8cc7\u6e90\u4fa1\u5024\u306e\u5909\u5316\u306b\u95a2\u3059\u308b\u8abf\u67fb\u7814\u7a76","funder_award_id":"242033","funder_id":"https://openalex.org/F4320334764","funder_display_name":"Japan Society for the Promotion of Science"},{"id":"https://openalex.org/G6981563308","display_name":"Saclay Plant Sciences","funder_award_id":"ANR-10-LABX-0040","funder_id":"https://openalex.org/F4320320883","funder_display_name":"Agence Nationale de la Recherche"},{"id":"https://openalex.org/G7240651115","display_name":null,"funder_award_id":"ANR-10","funder_id":"https://openalex.org/F4320320883","funder_display_name":"Agence Nationale de la Recherche"},{"id":"https://openalex.org/G7376787254","display_name":null,"funder_award_id":"ANR-10-LABX","funder_id":"https://openalex.org/F4320320883","funder_display_name":"Agence Nationale de la Recherche"},{"id":"https://openalex.org/G8267271830","display_name":null,"funder_award_id":"LABX-0040-SPS","funder_id":"https://openalex.org/F4320320883","funder_display_name":"Agence Nationale de la Recherche"}],"funders":[{"id":"https://openalex.org/F4320320883","display_name":"Agence Nationale de la Recherche","ror":"https://ror.org/00rbzpz17"},{"id":"https://openalex.org/F4320322832","display_name":"University of Tokyo","ror":"https://ror.org/057zh3y96"},{"id":"https://openalex.org/F4320324691","display_name":"Tokyo University of Agriculture","ror":"https://ror.org/05crbcr45"},{"id":"https://openalex.org/F4320325836","display_name":"Tokyo University of Agriculture and Technology","ror":"https://ror.org/00qg0kr10"},{"id":"https://openalex.org/F4320334764","display_name":"Japan Society for the Promotion of Science","ror":"https://ror.org/00hhkn466"},{"id":"https://openalex.org/F4320335125","display_name":"RIKEN","ror":"https://ror.org/01sjwvz98"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2965524832.pdf","grobid_xml":"https://content.openalex.org/works/W2965524832.grobid-xml"},"referenced_works_count":61,"referenced_works":["https://openalex.org/W45534775","https://openalex.org/W1969516929","https://openalex.org/W1970910669","https://openalex.org/W1973268693","https://openalex.org/W1974858088","https://openalex.org/W1987772565","https://openalex.org/W1989926783","https://openalex.org/W1994225386","https://openalex.org/W1998696969","https://openalex.org/W1999981715","https://openalex.org/W2006595529","https://openalex.org/W2006958832","https://openalex.org/W2011061591","https://openalex.org/W2011496597","https://openalex.org/W2022064793","https://openalex.org/W2027760994","https://openalex.org/W2030811002","https://openalex.org/W2030912673","https://openalex.org/W2031153874","https://openalex.org/W2032364030","https://openalex.org/W2034728960","https://openalex.org/W2036523228","https://openalex.org/W2036942494","https://openalex.org/W2037718263","https://openalex.org/W2039344929","https://openalex.org/W2051263494","https://openalex.org/W2051537216","https://openalex.org/W2075676381","https://openalex.org/W2086758397","https://openalex.org/W2088317734","https://openalex.org/W2090103785","https://openalex.org/W2093823825","https://openalex.org/W2100013924","https://openalex.org/W2102844420","https://openalex.org/W2103756029","https://openalex.org/W2105228005","https://openalex.org/W2106209421","https://openalex.org/W2110836474","https://openalex.org/W2112520986","https://openalex.org/W2122640833","https://openalex.org/W2127182373","https://openalex.org/W2128655415","https://openalex.org/W2140117843","https://openalex.org/W2141036148","https://openalex.org/W2147455540","https://openalex.org/W2148181797","https://openalex.org/W2148424574","https://openalex.org/W2148490163","https://openalex.org/W2150034639","https://openalex.org/W2151469356","https://openalex.org/W2155310956","https://openalex.org/W2155469636","https://openalex.org/W2171340504","https://openalex.org/W2235305215","https://openalex.org/W2301028390","https://openalex.org/W2327638930","https://openalex.org/W2560416976","https://openalex.org/W2569683060","https://openalex.org/W2582743722","https://openalex.org/W2770875622","https://openalex.org/W2936870295"],"related_works":["https://openalex.org/W2155469636","https://openalex.org/W7071362369","https://openalex.org/W2112520986","https://openalex.org/W3009829796","https://openalex.org/W2155310956","https://openalex.org/W2075676381","https://openalex.org/W2147455540","https://openalex.org/W4281983201","https://openalex.org/W2974316818","https://openalex.org/W2111158743"],"abstract_inverted_index":{"During":[0],"seed":[1,23],"germination,":[2],"proteins":[3,38,96,109,132,142,172,193],"are":[4,20,176,194],"translated":[5,39,98],"not":[6],"only":[7],"from":[8,16,40,99,173],"mRNAs":[9,18,42,47,101,128,175,214],"newly":[10],"transcribed":[11,46],"upon":[12,118,151,224],"imbibition":[13,225],"but":[14],"also":[15],"long-lived":[17,41,100,174,213],"that":[19,72,91,127,167,212],"synthesized":[21],"during":[22,135],"maturation":[24],"and":[25,43,148,156,161,202,207,219],"stored":[26],"in":[27,48,77,123,145,178,196],"the":[28,34,62,81,130,140,170,191,231],"mature":[29],"dry":[30,146],"seeds.":[31],"To":[32],"clarify":[33],"distinct":[35],"roles":[36],"of":[37,64,94,129,139,159,169,221],"de":[44,115,227],"novo":[45,116,228],"germinating":[49,78],"rice":[50,238],"embryos,":[51],"proteome":[52],"analysis":[53,89,165],"based":[54],"on":[55,114],"liquid":[56],"chromatography-tandem":[57],"mass":[58],"spectrometry":[59],"(LC-MS/MS)":[60],"combining":[61],"use":[63],"a":[65,92],"transcriptional":[66],"inhibitor":[67],"was":[68],"performed.":[69],"We":[70,210],"observed":[71],"\u03b1-amanitin":[73],"significantly":[74],"represses":[75],"transcription":[76,117,229],"embryos;":[79],"nevertheless,":[80],"embryos":[82,147],"could":[83],"germinate,":[84],"albeit":[85],"slowly.":[86],"The":[87],"proteomic":[88],"revealed":[90],"total":[93],"109":[95,141,171],"were":[97,112],"associated":[102],"with":[103],"germination":[104,136],"as":[105,107,182,186,199],"well":[106],"222":[108,131,192],"whose":[110],"expression":[111],"dependent":[113],"imbibition.":[119,152],"Transcriptomic":[120],"datasets":[121],"available":[122],"public":[124],"databases":[125],"demonstrated":[126],"notably":[133],"increased":[134],"while":[137,190],"those":[138],"highly":[143],"accumulated":[144],"constitutively":[149],"expressed":[150],"Gene":[153],"Ontology":[154],"enrichment":[155],"Kyoto":[157],"Encyclopedia":[158],"Genes":[160],"Genomes":[162],"(KEGG)":[163],"pathway":[164],"indicated":[166],"many":[168],"implicated":[177],"energy":[179,217,232],"production":[180,218,233],"such":[181,198],"glycolysis":[183],"or":[184],"annotated":[185],"nucleotide":[187],"binding":[188],"proteins,":[189],"involved":[195],"pathways":[197],"pyruvate":[200],"metabolism":[201],"TCA":[203],"cycle":[204],"following":[205],"glycolysis,":[206,235],"momilactones":[208],"biosynthesis.":[209],"propose":[211],"support":[215],"initial":[216],"activation":[220],"translational":[222],"machinery":[223],"whereas":[226],"accelerates":[230],"after":[234],"which":[236],"enables":[237],"seeds":[239],"to":[240],"germinate":[241],"vigorously.":[242]},"counts_by_year":[{"year":2026,"cited_by_count":4},{"year":2025,"cited_by_count":6},{"year":2024,"cited_by_count":3},{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":4},{"year":2021,"cited_by_count":5},{"year":2020,"cited_by_count":3},{"year":2019,"cited_by_count":1}],"updated_date":"2026-11-10T11:39:43.021295","created_date":"2019-08-13T00:00:00"}