{"id":"https://openalex.org/W2960517795","doi":"https://doi.org/10.3389/fpls.2019.00976","title":"Roles of Argonautes and Dicers on Sclerotinia sclerotiorum Antiviral RNA Silencing","display_name":"Roles of Argonautes and Dicers on Sclerotinia sclerotiorum Antiviral RNA Silencing","publication_year":2019,"publication_date":"2019-07-30","ids":{"openalex":"https://openalex.org/W2960517795","doi":"https://doi.org/10.3389/fpls.2019.00976","mag":"2960517795","pmid":"https://pubmed.ncbi.nlm.nih.gov/31440265","pmcid":"https://www.ncbi.nlm.nih.gov/pmc/articles/6694225"},"language":"en","primary_location":{"id":"doi:10.3389/fpls.2019.00976","doi":"https://doi.org/10.3389/fpls.2019.00976","is_oa":true,"landing_page_url":"https://doi.org/10.3389/fpls.2019.00976","pdf_url":"https://www.frontiersin.org/articles/10.3389/fpls.2019.00976/pdf","source":{"id":"https://openalex.org/S2493613807","display_name":"Frontiers in Plant Science","issn_l":"1664-462X","issn":["1664-462X"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["cwts-core","doaj","norway-2","poland-100","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310320527","host_organization_name":"Frontiers Media","host_organization_lineage":["https://openalex.org/P4310320527"],"host_organization_lineage_names":["Frontiers Media"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Frontiers in Plant Science","raw_type":"journal-article"},"volume":null,"type":"article","is_traditional":true,"indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://www.frontiersin.org/articles/10.3389/fpls.2019.00976/pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5045346390","display_name":"Achal Neupane","orcid":"https://orcid.org/0000-0003-0371-1177","observed_orcids":["https://orcid.org/0000-0003-0371-1177"]},"institutions":[{"id":"https://openalex.org/I177156846","display_name":"South Dakota State University","ror":"https://ror.org/015jmes13","country_code":"US","type":"education","lineage":["https://openalex.org/I177156846"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Achal Neupane","raw_affiliation_strings":["Department of Biology and Microbiology, South Dakota State University, Brookings, SD, United States"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biology and Microbiology, South Dakota State University, Brookings, SD, United States","institution_ids":["https://openalex.org/I177156846"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5074727448","display_name":"Chenchen Feng","orcid":"https://orcid.org/0000-0002-1854-356X","observed_orcids":["https://orcid.org/0000-0002-1854-356X","https://orcid.org/0009-0008-2598-4022"]},"institutions":[{"id":"https://openalex.org/I177156846","display_name":"South Dakota State University","ror":"https://ror.org/015jmes13","country_code":"US","type":"education","lineage":["https://openalex.org/I177156846"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Chenchen Feng","raw_affiliation_strings":["Department of Agronomy, Horticulture and Plant Science, South Dakota State University, Brookings, SD, United States"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Agronomy, Horticulture and Plant Science, South Dakota State University, Brookings, SD, United States","institution_ids":["https://openalex.org/I177156846"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5085071829","display_name":"Pauline Mochama","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I177156846","display_name":"South Dakota State University","ror":"https://ror.org/015jmes13","country_code":"US","type":"education","lineage":["https://openalex.org/I177156846"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Pauline K. Mochama","raw_affiliation_strings":["Department of Biology and Microbiology, South Dakota State University, Brookings, SD, United States"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biology and Microbiology, South Dakota State University, Brookings, SD, United States","institution_ids":["https://openalex.org/I177156846"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5005953498","display_name":"Huma Saleem","orcid":"https://orcid.org/0009-0005-9742-871X","observed_orcids":["https://orcid.org/0009-0005-9742-871X"]},"institutions":[{"id":"https://openalex.org/I177156846","display_name":"South Dakota State University","ror":"https://ror.org/015jmes13","country_code":"US","type":"education","lineage":["https://openalex.org/I177156846"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Huma Saleem","raw_affiliation_strings":["Department of Biology and Microbiology, South Dakota State University, Brookings, SD, United States"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biology and Microbiology, South Dakota State University, Brookings, SD, United States","institution_ids":["https://openalex.org/I177156846"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5025892138","display_name":"Shin-Yi Lee Marzano","orcid":"https://orcid.org/0000-0003-0548-3761","observed_orcids":["https://orcid.org/0000-0003-0548-3761"]},"institutions":[{"id":"https://openalex.org/I177156846","display_name":"South Dakota State University","ror":"https://ror.org/015jmes13","country_code":"US","type":"education","lineage":["https://openalex.org/I177156846"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Shin-Yi Lee Marzano","raw_affiliation_strings":["Department of Agronomy, Horticulture and Plant Science, South Dakota State University, Brookings, SD, United States","Department of Biology and Microbiology, South Dakota State University, Brookings, SD, United States"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Agronomy, Horticulture and Plant Science, South Dakota State University, Brookings, SD, United States","institution_ids":["https://openalex.org/I177156846"]},{"raw_affiliation_string":"Department of Biology and Microbiology, South Dakota State University, Brookings, SD, United States","institution_ids":["https://openalex.org/I177156846"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":["https://openalex.org/A5025892138"],"corresponding_institution_ids":["https://openalex.org/I177156846"],"apc_list":{"value":2950,"currency":"USD","value_usd":2950},"apc_paid":{"value":2950,"currency":"USD","value_usd":2950},"fwci":1.7125,"has_fulltext":true,"cited_by_count":42,"citation_normalized_percentile":{"value":0.83200723,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":88,"max":99},"biblio":{"volume":"10","issue":null,"first_page":"976","last_page":"976"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T13220","display_name":"Plant and Fungal Interactions Research","score":0.9932000041007996,"subfield":{"id":"https://openalex.org/subfields/2406","display_name":"Virology"},"field":{"id":"https://openalex.org/fields/24","display_name":"Immunology and Microbiology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T13220","display_name":"Plant and Fungal Interactions Research","score":0.9932000041007996,"subfield":{"id":"https://openalex.org/subfields/2406","display_name":"Virology"},"field":{"id":"https://openalex.org/fields/24","display_name":"Immunology and Microbiology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12771","display_name":"Plant pathogens and resistance mechanisms","score":0.0044999998062849045,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10494","display_name":"Plant Virus Research Studies","score":0.0005000000237487257,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/sclerotinia-sclerotiorum","display_name":"Sclerotinia sclerotiorum","score":0.9810000061988831},{"id":"https://openalex.org/keywords/rna-silencing","display_name":"RNA silencing","score":0.7689999938011169},{"id":"https://openalex.org/keywords/rna-interference","display_name":"RNA interference","score":0.8209999799728394},{"id":"https://openalex.org/keywords/argonaute-proteins","display_name":"Argonaute proteins","score":0.7179999947547913},{"id":"https://openalex.org/keywords/dcl1","display_name":"DCL1","score":0.7620000243186951},{"id":"https://openalex.org/keywords/mycoviruses","display_name":"mycoviruses","score":0.8690000176429749},{"id":"https://openalex.org/keywords/antiviral-defense","display_name":"antiviral defense","score":0.8629999756813049},{"id":"https://openalex.org/keywords/small-rna-biogenesis","display_name":"small RNA biogenesis","score":0.8889999985694885},{"id":"https://openalex.org/keywords/fungal-virulence","display_name":"fungal virulence","score":0.703000009059906},{"id":"https://openalex.org/keywords/gene-disruption-mutants","display_name":"gene disruption mutants","score":0.7139999866485596},{"id":"https://openalex.org/keywords/complementation","display_name":"complementation","score":0.847000002861023}],"concepts":[{"id":"https://openalex.org/C2778530245","wikidata":"https://www.wikidata.org/wiki/Q2165315","display_name":"Sclerotinia sclerotiorum","level":2,"score":0.9189668893814087},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.8489326238632202},{"id":"https://openalex.org/C2191507","wikidata":"https://www.wikidata.org/wiki/Q7277185","display_name":"RNA silencing","level":5,"score":0.8134833574295044},{"id":"https://openalex.org/C119056186","wikidata":"https://www.wikidata.org/wiki/Q1431332","display_name":"Gene silencing","level":3,"score":0.6650974750518799},{"id":"https://openalex.org/C166703698","wikidata":"https://www.wikidata.org/wiki/Q201993","display_name":"RNA interference","level":4,"score":0.6643523573875427},{"id":"https://openalex.org/C2779341050","wikidata":"https://www.wikidata.org/wiki/Q24287527","display_name":"Small RNA","level":4,"score":0.6436226963996887},{"id":"https://openalex.org/C67705224","wikidata":"https://www.wikidata.org/wiki/Q11053","display_name":"RNA","level":3,"score":0.6435743570327759},{"id":"https://openalex.org/C2779867133","wikidata":"https://www.wikidata.org/wiki/Q21111297","display_name":"Dicer","level":5,"score":0.6299911141395569},{"id":"https://openalex.org/C201853390","wikidata":"https://www.wikidata.org/wiki/Q413236","display_name":"Argonaute","level":5,"score":0.5975612998008728},{"id":"https://openalex.org/C155330019","wikidata":"https://www.wikidata.org/wiki/Q21106117","display_name":"RNA-induced silencing complex","level":5,"score":0.5600507855415344},{"id":"https://openalex.org/C143065580","wikidata":"https://www.wikidata.org/wiki/Q3285695","display_name":"Mutant","level":3,"score":0.5051088929176331},{"id":"https://openalex.org/C22615655","wikidata":"https://www.wikidata.org/wiki/Q203221","display_name":"Small interfering RNA","level":4,"score":0.4849948585033417},{"id":"https://openalex.org/C60723119","wikidata":"https://www.wikidata.org/wiki/Q7833577","display_name":"Trans-acting siRNA","level":5,"score":0.4192348122596741},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.3745875954627991},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.3608444333076477},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.07136529684066772}],"mesh":[],"locations_count":4,"locations":[{"id":"doi:10.3389/fpls.2019.00976","doi":"https://doi.org/10.3389/fpls.2019.00976","is_oa":true,"landing_page_url":"https://doi.org/10.3389/fpls.2019.00976","pdf_url":"https://www.frontiersin.org/articles/10.3389/fpls.2019.00976/pdf","source":{"id":"https://openalex.org/S2493613807","display_name":"Frontiers in Plant Science","issn_l":"1664-462X","issn":["1664-462X"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["cwts-core","doaj","norway-2","poland-100","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310320527","host_organization_name":"Frontiers Media","host_organization_lineage":["https://openalex.org/P4310320527"],"host_organization_lineage_names":["Frontiers Media"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Frontiers in Plant Science","raw_type":"journal-article"},{"id":"pmid:31440265","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/31440265","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Frontiers in plant science","raw_type":"Journal Article"},{"id":"pmh:oai:pubmedcentral.nih.gov:6694225","doi":null,"is_oa":true,"landing_page_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC6694225/","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Front Plant Sci","raw_type":"Text"},{"id":"pmh:oai:doaj.org/article:f23372c6298249a79d6d533db67b6fba","doi":null,"is_oa":true,"landing_page_url":"https://doaj.org/article/f23372c6298249a79d6d533db67b6fba","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Frontiers in Plant Science, Vol 10 (2019)","raw_type":"article"}],"best_oa_location":{"id":"doi:10.3389/fpls.2019.00976","doi":"https://doi.org/10.3389/fpls.2019.00976","is_oa":true,"landing_page_url":"https://doi.org/10.3389/fpls.2019.00976","pdf_url":"https://www.frontiersin.org/articles/10.3389/fpls.2019.00976/pdf","source":{"id":"https://openalex.org/S2493613807","display_name":"Frontiers in Plant Science","issn_l":"1664-462X","issn":["1664-462X"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["cwts-core","doaj","norway-2","poland-100","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310320527","host_organization_name":"Frontiers Media","host_organization_lineage":["https://openalex.org/P4310320527"],"host_organization_lineage_names":["Frontiers Media"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Frontiers in Plant Science","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/2","display_name":"Zero hunger","score":0.6735000014305115}],"study_designs":[],"awards":[{"id":"https://openalex.org/G2834426756","display_name":null,"funder_award_id":"SA1800330","funder_id":"https://openalex.org/F4320306114","funder_display_name":"U.S. Department of Agriculture"}],"funders":[{"id":"https://openalex.org/F4320306114","display_name":"U.S. Department of Agriculture","ror":"https://ror.org/01na82s61"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2960517795.pdf","grobid_xml":"https://content.openalex.org/works/W2960517795.grobid-xml"},"referenced_works_count":33,"referenced_works":["https://openalex.org/W1201157366","https://openalex.org/W1968794467","https://openalex.org/W1971279688","https://openalex.org/W1986640851","https://openalex.org/W2015456365","https://openalex.org/W2015914068","https://openalex.org/W2024403623","https://openalex.org/W2043812530","https://openalex.org/W2055043387","https://openalex.org/W2072519096","https://openalex.org/W2073946012","https://openalex.org/W2112167962","https://openalex.org/W2112225205","https://openalex.org/W2114067488","https://openalex.org/W2124985265","https://openalex.org/W2127493394","https://openalex.org/W2128606612","https://openalex.org/W2140166150","https://openalex.org/W2151883199","https://openalex.org/W2158178674","https://openalex.org/W2165758921","https://openalex.org/W2166379381","https://openalex.org/W2311203695","https://openalex.org/W2393535458","https://openalex.org/W2414735070","https://openalex.org/W2521150917","https://openalex.org/W2792234982","https://openalex.org/W2794818747","https://openalex.org/W2904815792","https://openalex.org/W2914018683","https://openalex.org/W2964201212","https://openalex.org/W4206540819","https://openalex.org/W4297723515"],"related_works":["https://openalex.org/W2794818747","https://openalex.org/W4387012360","https://openalex.org/W2885517352","https://openalex.org/W3036325382","https://openalex.org/W2414735070","https://openalex.org/W2581905084","https://openalex.org/W3104002912","https://openalex.org/W4396887159","https://openalex.org/W2905245198","https://openalex.org/W4404473516"],"abstract_inverted_index":{"RNA":[0,3,28,52,72,102,125,209,247,252],"silencing":[1,29,53,73,253],"or":[2,62],"interference":[4],"(RNAi)":[5],"is":[6,239],"an":[7],"essential":[8],"mechanism":[9],"in":[10,17,36,54,60,75,100,104,118,168,211,215],"animals,":[11],"fungi,":[12,27],"and":[13,20,49,98,112,123,139,171,186],"plants":[14],"that":[15,45],"functions":[16],"gene":[18],"regulation":[19],"defense":[21,37],"against":[22,38],"foreign":[23],"nucleic":[24,40],"acids.":[25,41],"In":[26],"has":[30],"been":[31],"shown":[32],"to":[33,78,142,161,236],"function":[34],"primarily":[35],"invasive":[39],"We":[42],"previously":[43],"determined":[44],"mycoviruses":[46],"are":[47],"triggers":[48],"targets":[50],"of":[51,70,82,94,110,176,181,193,204,246,258],"Sclerotinia":[55],"sclerotiorum.":[56,106,213],"However,":[57],"recent":[58],"progresses":[59],"RNAi":[61],"dsRNA-based":[63,83],"pest":[64],"control":[65,257],"requires":[66],"more":[67],"detailed":[68],"characterization":[69],"the":[71,80,92,132,146,151,173,191,194,202,240,244,256,259],"pathways":[74],"S.":[76,105,212,250],"sclerotiorum":[77,251],"investigate":[79],"utility":[81],"strategy":[84],"for":[85,116,207,255],"white":[86],"mold":[87],"control.":[88],"This":[89,238],"study":[90],"elucidates":[91],"roles":[93],"argonaute":[95],"enzymes,":[96],"agl-2":[97,111,220,233],"agl-4,":[99,183],"small":[101,124,198,208],"metabolism":[103],"Gene":[107,178],"disruption":[108,179],"mutants":[109,180],"agl-4":[113],"were":[114,166],"compared":[115,160,235],"changes":[117],"phenotype,":[119],"virulence,":[120],"viral":[121],"susceptibility,":[122],"profiles.":[126],"The":[127,164],"\u2206agl-2":[128,147],"mutant":[129,134,148],"but":[130,149],"not":[131,150,189],"\u2206agl-4":[133,152],"had":[135],"significantly":[136,223],"slower":[137],"growth":[138],"virulence":[140],"prior":[141],"virus":[143,158],"infection.":[144],"Similarly,":[145],"mutant,":[153],"showed":[154,221],"greater":[155],"debilitation":[156],"under":[157],"infection":[159],"uninfected":[162],"strains.":[163],"responses":[165],"confirmed":[167],"complementation":[169],"studies":[170],"revealed":[172],"antiviral":[174],"role":[175],"agl-2.":[177],"agl-2,":[182],"Dicer-like":[184],"(dcl)-1":[185],"dcl-2":[187],"did":[188],"change":[190],"stability":[192],"most":[195],"abundant":[196],"endogenous":[197],"RNAs,":[199],"which":[200],"suggests":[201],"existence":[203],"alternative":[205],"enzymes/pathways":[206],"biogenesis":[210],"Furthermore,":[214],"vitro":[216],"synthesized":[217],"dsRNA":[218],"targeting":[219,249],"a":[222],"reduced":[224],"average":[225],"lesion":[226],"diameter":[227],"(P<0.05)":[228],"on":[229],"canola":[230],"leaves":[231],"with":[232],"down-regulated":[234],"controls.":[237],"first":[241],"report":[242],"describing":[243],"effectiveness":[245],"pesticides":[248],"pathway":[254],"economically":[260],"important":[261],"pathogen.":[262]},"counts_by_year":[{"year":2026,"cited_by_count":4},{"year":2025,"cited_by_count":8},{"year":2024,"cited_by_count":4},{"year":2023,"cited_by_count":10},{"year":2022,"cited_by_count":4},{"year":2021,"cited_by_count":4},{"year":2020,"cited_by_count":7},{"year":2019,"cited_by_count":1}],"updated_date":"2026-11-10T11:39:43.021295","created_date":"2019-07-23T00:00:00"}
