{"id":"https://openalex.org/W2959618561","doi":"https://doi.org/10.21608/djvs.2019.48002","title":"Genetic Analysis of Highly Pathogenic Avian Influenza H5N1 in West Delta Governorate","display_name":"Genetic Analysis of Highly Pathogenic Avian Influenza H5N1 in West Delta Governorate","publication_year":2019,"publication_date":"2019-01-01","ids":{"openalex":"https://openalex.org/W2959618561","doi":"https://doi.org/10.21608/djvs.2019.48002","mag":"2959618561"},"language":"en","primary_location":{"id":"doi:10.21608/djvs.2019.48002","doi":"https://doi.org/10.21608/djvs.2019.48002","is_oa":true,"landing_page_url":"https://doi.org/10.21608/djvs.2019.48002","pdf_url":"https://djvs.journals.ekb.eg/article_48002_53bf603d1edc16427a4a2dd331bdb3f0.pdf","source":{"id":"https://openalex.org/S4210237303","display_name":"Damanhour Journal of Veterinary Sciences","issn_l":"2636-3011","issn":["2636-3011","2636-3003"],"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/P4323237894","host_organization_name":"Egypts Presidential Specialized Council for Education and Scientific Research","host_organization_lineage":["https://openalex.org/P4323237894"],"host_organization_lineage_names":["Egypts Presidential Specialized Council for Education and Scientific Research"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Damanhour Journal of Veterinary Sciences","raw_type":"journal-article"},"volume":null,"type":"article","is_traditional":true,"indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"diamond","oa_url":"https://djvs.journals.ekb.eg/article_48002_53bf603d1edc16427a4a2dd331bdb3f0.pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5083635344","display_name":"Sahar Hagag","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I169744251","display_name":"Damanhour University","ror":"https://ror.org/03svthf85","country_code":"EG","type":"education","lineage":["https://openalex.org/I169744251"]}],"countries":["EG"],"is_corresponding":false,"raw_author_name":"Sahar Hagag","raw_affiliation_strings":["Department of Poultry and Fish Diseases, , Faculty of Veterinary Medicine, Damanhour University"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Poultry and Fish Diseases, , Faculty of Veterinary Medicine, Damanhour University","institution_ids":["https://openalex.org/I169744251"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5005643709","display_name":"Hatem S. Abd El-Hamid","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I169744251","display_name":"Damanhour University","ror":"https://ror.org/03svthf85","country_code":"EG","type":"education","lineage":["https://openalex.org/I169744251"]}],"countries":["EG"],"is_corresponding":false,"raw_author_name":"Hatem Abdel-Hamid","raw_affiliation_strings":["Department of Poultry and Fish Diseases, , Faculty of Veterinary Medicine, Damanhour University"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Poultry and Fish Diseases, , Faculty of Veterinary Medicine, Damanhour University","institution_ids":["https://openalex.org/I169744251"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5014353322","display_name":"Abdelsattar Arafa","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I169744251","display_name":"Damanhour University","ror":"https://ror.org/03svthf85","country_code":"EG","type":"education","lineage":["https://openalex.org/I169744251"]}],"countries":["EG"],"is_corresponding":false,"raw_author_name":"Abdelsattar Arafa","raw_affiliation_strings":["Department of Poultry and Fish Diseases, , Faculty of Veterinary Medicine, Damanhour University"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Poultry and Fish Diseases, , Faculty of Veterinary Medicine, Damanhour University","institution_ids":["https://openalex.org/I169744251"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5062386568","display_name":"Ahmed Ragab Elbestawy","orcid":"https://orcid.org/0000-0002-1272-153X","observed_orcids":["https://orcid.org/0000-0002-1272-153X"]},"institutions":[{"id":"https://openalex.org/I169744251","display_name":"Damanhour University","ror":"https://ror.org/03svthf85","country_code":"EG","type":"education","lineage":["https://openalex.org/I169744251"]}],"countries":["EG"],"is_corresponding":false,"raw_author_name":"Ahmed Elbestawy","raw_affiliation_strings":["Department of Poultry and Fish Diseases, , Faculty of Veterinary Medicine, Damanhour University"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Poultry and Fish Diseases, , Faculty of Veterinary Medicine, Damanhour University","institution_ids":["https://openalex.org/I169744251"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5008872613","display_name":"Hany Fawzy Ellakany","orcid":"https://orcid.org/0000-0002-9250-9255","observed_orcids":["https://orcid.org/0000-0002-9250-9255"]},"institutions":[{"id":"https://openalex.org/I169744251","display_name":"Damanhour University","ror":"https://ror.org/03svthf85","country_code":"EG","type":"education","lineage":["https://openalex.org/I169744251"]}],"countries":["EG"],"is_corresponding":false,"raw_author_name":"Hany Ellakany","raw_affiliation_strings":["Department of Poultry and Fish Diseases, , Faculty of Veterinary Medicine, Damanhour University"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Poultry and Fish Diseases, , Faculty of Veterinary Medicine, Damanhour University","institution_ids":["https://openalex.org/I169744251"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5001496898","display_name":"Ahmed Salah eldin","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I169744251","display_name":"Damanhour University","ror":"https://ror.org/03svthf85","country_code":"EG","type":"education","lineage":["https://openalex.org/I169744251"]}],"countries":["EG"],"is_corresponding":false,"raw_author_name":"Ahmed Salah eldin","raw_affiliation_strings":["Department of Poultry and Fish Diseases, , Faculty of Veterinary Medicine, Damanhour University"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Poultry and Fish Diseases, , Faculty of Veterinary Medicine, Damanhour University","institution_ids":["https://openalex.org/I169744251"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5069282933","display_name":"Ahmed Ramadan Gado","orcid":"https://orcid.org/0000-0002-5920-5321","observed_orcids":["https://orcid.org/0000-0002-5920-5321"]},"institutions":[{"id":"https://openalex.org/I169744251","display_name":"Damanhour University","ror":"https://ror.org/03svthf85","country_code":"EG","type":"education","lineage":["https://openalex.org/I169744251"]}],"countries":["EG"],"is_corresponding":false,"raw_author_name":"Ahmed Gado","raw_affiliation_strings":["Department of Poultry and Fish Diseases, , Faculty of Veterinary Medicine, Damanhour University"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Poultry and Fish Diseases, , Faculty of Veterinary Medicine, Damanhour University","institution_ids":["https://openalex.org/I169744251"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":[],"corresponding_institution_ids":["https://openalex.org/I169744251"],"apc_list":null,"apc_paid":null,"fwci":0.1895,"has_fulltext":true,"cited_by_count":1,"citation_normalized_percentile":{"value":0.49288504,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":87,"max":93},"biblio":{"volume":"2","issue":"0","first_page":"1","last_page":"1"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10167","display_name":"Influenza Virus Research Studies","score":1.0,"subfield":{"id":"https://openalex.org/subfields/2713","display_name":"Epidemiology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T10167","display_name":"Influenza Virus Research Studies","score":1.0,"subfield":{"id":"https://openalex.org/subfields/2713","display_name":"Epidemiology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T11495","display_name":"Animal Virus Infections Studies","score":0.0,"subfield":{"id":"https://openalex.org/subfields/1103","display_name":"Animal Science and Zoology"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11135","display_name":"Virology and Viral Diseases","score":0.0,"subfield":{"id":"https://openalex.org/subfields/2713","display_name":"Epidemiology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/highly-pathogenic-avian-influenza","display_name":"highly pathogenic avian influenza","score":0.968999981880188},{"id":"https://openalex.org/keywords/h5n1","display_name":"H5N1","score":0.9409999847412109},{"id":"https://openalex.org/keywords/egypt","display_name":"Egypt","score":0.6359999775886536},{"id":"https://openalex.org/keywords/broiler-chickens","display_name":"broiler chickens","score":0.7289999723434448},{"id":"https://openalex.org/keywords/hemagglutinin-gene","display_name":"hemagglutinin gene","score":0.9160000085830688},{"id":"https://openalex.org/keywords/neuraminidase-gene","display_name":"neuraminidase gene","score":0.996999979019165},{"id":"https://openalex.org/keywords/viral-evolution","display_name":"viral evolution","score":0.4950000047683716},{"id":"https://openalex.org/keywords/poultry-disease-surveillance","display_name":"poultry disease surveillance","score":0.5199999809265137}],"concepts":[{"id":"https://openalex.org/C519248777","wikidata":"https://www.wikidata.org/wiki/Q160122","display_name":"Influenza A virus subtype H5N1","level":3,"score":0.9477959275245667},{"id":"https://openalex.org/C3019819676","wikidata":"https://www.wikidata.org/wiki/Q43987","display_name":"Highly pathogenic","level":4,"score":0.8289040327072144},{"id":"https://openalex.org/C134215735","wikidata":"https://www.wikidata.org/wiki/Q120997","display_name":"Flock","level":2,"score":0.8261233568191528},{"id":"https://openalex.org/C44465124","wikidata":"https://www.wikidata.org/wiki/Q713623","display_name":"Clade","level":4,"score":0.754050612449646},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.6447331309318542},{"id":"https://openalex.org/C66914385","wikidata":"https://www.wikidata.org/wiki/Q861182","display_name":"Poultry farming","level":2,"score":0.5811364054679871},{"id":"https://openalex.org/C159047783","wikidata":"https://www.wikidata.org/wiki/Q7215","display_name":"Virology","level":1,"score":0.5502930283546448},{"id":"https://openalex.org/C2780289900","wikidata":"https://www.wikidata.org/wiki/Q326301","display_name":"Broiler","level":2,"score":0.47118356823921204},{"id":"https://openalex.org/C42972112","wikidata":"https://www.wikidata.org/wiki/Q170201","display_name":"Veterinary medicine","level":1,"score":0.3555552661418915},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.33787548542022705},{"id":"https://openalex.org/C193252679","wikidata":"https://www.wikidata.org/wiki/Q242125","display_name":"Phylogenetic tree","level":3,"score":0.318989634513855},{"id":"https://openalex.org/C2522874641","wikidata":"https://www.wikidata.org/wiki/Q808","display_name":"Virus","level":2,"score":0.24331781268119812},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.11990347504615784},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.10095781087875366},{"id":"https://openalex.org/C18903297","wikidata":"https://www.wikidata.org/wiki/Q7150","display_name":"Ecology","level":1,"score":0.06839889287948608},{"id":"https://openalex.org/C140793950","wikidata":"https://www.wikidata.org/wiki/Q168091","display_name":"Animal science","level":1,"score":0.05041345953941345}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.21608/djvs.2019.48002","doi":"https://doi.org/10.21608/djvs.2019.48002","is_oa":true,"landing_page_url":"https://doi.org/10.21608/djvs.2019.48002","pdf_url":"https://djvs.journals.ekb.eg/article_48002_53bf603d1edc16427a4a2dd331bdb3f0.pdf","source":{"id":"https://openalex.org/S4210237303","display_name":"Damanhour Journal of Veterinary Sciences","issn_l":"2636-3011","issn":["2636-3011","2636-3003"],"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/P4323237894","host_organization_name":"Egypts Presidential Specialized Council for Education and Scientific Research","host_organization_lineage":["https://openalex.org/P4323237894"],"host_organization_lineage_names":["Egypts Presidential Specialized Council for Education and Scientific Research"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Damanhour Journal of Veterinary Sciences","raw_type":"journal-article"},{"id":"doi:10.5455/djvs.46042","doi":"https://doi.org/10.5455/djvs.46042","is_oa":false,"landing_page_url":"https://doi.org/10.5455/djvs.46042","pdf_url":null,"source":{"id":"https://openalex.org/S4210234682","display_name":"Ma\u011falla\u1e97 Al-Ta\u02bfl\u012bm Al-Tib\u012b Al-Mustamir","issn_l":"2636-2988","issn":["2636-2988","2636-2996"],"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Damanhour Journal of Veterinary Sciences","raw_type":"journal-article"}],"best_oa_location":{"id":"doi:10.21608/djvs.2019.48002","doi":"https://doi.org/10.21608/djvs.2019.48002","is_oa":true,"landing_page_url":"https://doi.org/10.21608/djvs.2019.48002","pdf_url":"https://djvs.journals.ekb.eg/article_48002_53bf603d1edc16427a4a2dd331bdb3f0.pdf","source":{"id":"https://openalex.org/S4210237303","display_name":"Damanhour Journal of Veterinary Sciences","issn_l":"2636-3011","issn":["2636-3011","2636-3003"],"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/P4323237894","host_organization_name":"Egypts Presidential Specialized Council for Education and Scientific Research","host_organization_lineage":["https://openalex.org/P4323237894"],"host_organization_lineage_names":["Egypts Presidential Specialized Council for Education and Scientific Research"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Damanhour Journal of Veterinary Sciences","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.5683000087738037,"id":"https://metadata.un.org/sdg/3","display_name":"Good health and well-being"},{"score":0.4359000027179718,"id":"https://metadata.un.org/sdg/2","display_name":"Zero hunger"}],"study_designs":[],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2959618561.pdf","grobid_xml":"https://content.openalex.org/works/W2959618561.grobid-xml"},"referenced_works_count":23,"referenced_works":["https://openalex.org/W1920362929","https://openalex.org/W1983427421","https://openalex.org/W1987162713","https://openalex.org/W1995482152","https://openalex.org/W2007817765","https://openalex.org/W2010648327","https://openalex.org/W2022705994","https://openalex.org/W2055043387","https://openalex.org/W2069831575","https://openalex.org/W2086100965","https://openalex.org/W2103301620","https://openalex.org/W2114918588","https://openalex.org/W2149229256","https://openalex.org/W2152207030","https://openalex.org/W2160881014","https://openalex.org/W2283113643","https://openalex.org/W2308144480","https://openalex.org/W2419464713","https://openalex.org/W2757638222","https://openalex.org/W2793172597","https://openalex.org/W3161772909","https://openalex.org/W3168314838","https://openalex.org/W6717366407"],"related_works":["https://openalex.org/W6911340226","https://openalex.org/W4417275679","https://openalex.org/W1873816189","https://openalex.org/W4415172718","https://openalex.org/W2594321461","https://openalex.org/W2524142821","https://openalex.org/W2123707576","https://openalex.org/W4415912079","https://openalex.org/W2084682393","https://openalex.org/W2018665135"],"abstract_inverted_index":{"Avian":[0],"influenza":[1,36],"viruses":[2,37,103,108,116],"became":[3],"widely":[4],"distributed":[5],"in":[6,19,42],"most":[7],"Middle":[8],"Eastern":[9],"countries,":[10],"causing":[11],"high":[12],"mortality":[13],"rate":[14],"and":[15,91,112],"severe":[16],"economic":[17],"losses":[18],"poultry":[20],"industry":[21],"especially":[22],"when":[23],"complicated":[24],"with":[25,106],"other":[26],"pathogens.":[27],"The":[28],"continuous":[29],"evolution":[30],"of":[31,81,89],"highly":[32],"pathogenic":[33],"H5N1":[34,69],"avian":[35],"(HPAI-":[38],"H5N1)":[39],"has":[40],"resulted":[41],"multiple":[43],"diverse":[44],"groups":[45],"based":[46],"on":[47],"their":[48],"haemagglutinin":[49],"(HA)":[50],"sequences.":[51],"In":[52],"this":[53],"study,":[54],"samples":[55],"from":[56,109,117],"40":[57],"broiler":[58],"chicken":[59],"farms":[60],"during":[61,98],"2014":[62],"-":[63],"2017":[64,99],"were":[65,76,104],"screened":[66],"for":[67,78,94],"HPAI-":[68],"Results":[70],"showed":[71,100],"that":[72,101],"15":[73],"flocks":[74],"(37.5%)":[75],"positive":[77],"HPAI-H5":[79],"all":[80],"them":[82],"non":[83],"vaccinated":[84],".":[85],"Furthermore,":[86],"full":[87],"sequencing":[88],"HA":[90],"NA":[92],"gene":[93],"3":[95],"isolates":[96],"isolated":[97],"the":[102],"clustered":[105],"Egyptian":[107],"clade":[110],"2.2.1.2":[111],"closely":[113],"related":[114],"to":[115],"neighboring":[118],"countries.":[119]},"counts_by_year":[{"year":2021,"cited_by_count":1}],"updated_date":"2026-11-12T12:28:57.059296","created_date":"2019-07-23T00:00:00"}
