{"id":"https://openalex.org/W2948823599","doi":"https://doi.org/10.1099/ijsem.0.003514","title":"Sphingobium terrigena sp. nov., isolated from gasoline-contaminated soil","display_name":"Sphingobium terrigena sp. nov., isolated from gasoline-contaminated soil","publication_year":2019,"publication_date":"2019-06-06","ids":{"openalex":"https://openalex.org/W2948823599","doi":"https://doi.org/10.1099/ijsem.0.003514","mag":"2948823599","pmid":"https://pubmed.ncbi.nlm.nih.gov/31169492"},"language":"en","primary_location":{"id":"doi:10.1099/ijsem.0.003514","doi":"https://doi.org/10.1099/ijsem.0.003514","is_oa":false,"landing_page_url":"https://doi.org/10.1099/ijsem.0.003514","pdf_url":null,"source":{"id":"https://openalex.org/S102181007","display_name":"INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY","issn_l":"1466-5026","issn":["1466-5026","1466-5034"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["cwts-core","dongbi-b","doyens","jufo-1","ki-jl-1","medline","norway-1","poland-70","russia-white-list-3","vabb-shw"],"host_organization":"https://openalex.org/P4310320497","host_organization_name":"Microbiology Society","host_organization_lineage":["https://openalex.org/P4310320497"],"host_organization_lineage_names":["Microbiology Society"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"International Journal of Systematic and Evolutionary Microbiology","raw_type":"journal-article"},"volume":null,"type":"article","is_traditional":true,"indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5027429205","display_name":"Yu Jin Park","orcid":"https://orcid.org/0000-0002-0344-8009","observed_orcids":["https://orcid.org/0000-0002-0344-8009"]},"institutions":[{"id":"https://openalex.org/I67900169","display_name":"Chung-Ang University","ror":"https://ror.org/01r024a98","country_code":"KR","type":"education","lineage":["https://openalex.org/I67900169"]}],"countries":["KR"],"is_corresponding":false,"raw_author_name":"Yu Jin Park","raw_affiliation_strings":["Department of Life Science, Chung-Ang University, Seoul 06974, Republic of Korea"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Life Science, Chung-Ang University, Seoul 06974, Republic of Korea","institution_ids":["https://openalex.org/I67900169"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101623668","display_name":"Kyung Hyun Kim","orcid":"https://orcid.org/0000-0002-7336-920X","observed_orcids":["https://orcid.org/0000-0002-7336-920X"]},"institutions":[{"id":"https://openalex.org/I67900169","display_name":"Chung-Ang University","ror":"https://ror.org/01r024a98","country_code":"KR","type":"education","lineage":["https://openalex.org/I67900169"]}],"countries":["KR"],"is_corresponding":false,"raw_author_name":"Kyung Hyun Kim","raw_affiliation_strings":["Department of Life Science, Chung-Ang University, Seoul 06974, Republic of Korea"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Life Science, Chung-Ang University, Seoul 06974, Republic of Korea","institution_ids":["https://openalex.org/I67900169"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5048648886","display_name":"Dong Min Han","orcid":"https://orcid.org/0000-0002-1075-010X","observed_orcids":["https://orcid.org/0000-0002-1075-010X"]},"institutions":[{"id":"https://openalex.org/I67900169","display_name":"Chung-Ang University","ror":"https://ror.org/01r024a98","country_code":"KR","type":"education","lineage":["https://openalex.org/I67900169"]}],"countries":["KR"],"is_corresponding":false,"raw_author_name":"Dong Min Han","raw_affiliation_strings":["Department of Life Science, Chung-Ang University, Seoul 06974, Republic of Korea"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Life Science, Chung-Ang University, Seoul 06974, Republic of Korea","institution_ids":["https://openalex.org/I67900169"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5115588249","display_name":"Dong Ho Lee","orcid":"https://orcid.org/0009-0001-9402-3363","observed_orcids":["https://orcid.org/0009-0001-9402-3363"]},"institutions":[{"id":"https://openalex.org/I67900169","display_name":"Chung-Ang University","ror":"https://ror.org/01r024a98","country_code":"KR","type":"education","lineage":["https://openalex.org/I67900169"]}],"countries":["KR"],"is_corresponding":false,"raw_author_name":"Dong Ho Lee","raw_affiliation_strings":["Department of Life Science, Chung-Ang University, Seoul 06974, Republic of Korea"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Life Science, Chung-Ang University, Seoul 06974, Republic of Korea","institution_ids":["https://openalex.org/I67900169"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5081759705","display_name":"Che Ok Jeon","orcid":"https://orcid.org/0000-0003-1665-2399","observed_orcids":["https://orcid.org/0000-0003-1665-2399"]},"institutions":[{"id":"https://openalex.org/I67900169","display_name":"Chung-Ang University","ror":"https://ror.org/01r024a98","country_code":"KR","type":"education","lineage":["https://openalex.org/I67900169"]}],"countries":["KR"],"is_corresponding":false,"raw_author_name":"Che Ok Jeon","raw_affiliation_strings":["Department of Life Science, Chung-Ang University, Seoul 06974, Republic of Korea"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Life Science, Chung-Ang University, Seoul 06974, Republic of Korea","institution_ids":["https://openalex.org/I67900169"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":[],"corresponding_institution_ids":["https://openalex.org/I67900169"],"apc_list":null,"apc_paid":null,"fwci":0.9162,"has_fulltext":false,"cited_by_count":16,"citation_normalized_percentile":{"value":0.70709329,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":88,"max":97},"biblio":{"volume":"69","issue":"8","first_page":"2459","last_page":"2464"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10324","display_name":"Microbial bioremediation and biosurfactants","score":0.9258000254631042,"subfield":{"id":"https://openalex.org/subfields/2310","display_name":"Pollution"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10324","display_name":"Microbial bioremediation and biosurfactants","score":0.9258000254631042,"subfield":{"id":"https://openalex.org/subfields/2310","display_name":"Pollution"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.054099999368190765,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T13736","display_name":"Steroid Chemistry and Biochemistry","score":0.005499999970197678,"subfield":{"id":"https://openalex.org/subfields/1605","display_name":"Organic Chemistry"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/novel-bacterial-species","display_name":"novel bacterial species","score":0.9769999980926514}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.7906825542449951},{"id":"https://openalex.org/C42062724","wikidata":"https://www.wikidata.org/wiki/Q1209205","display_name":"16S ribosomal RNA","level":3,"score":0.7533417344093323},{"id":"https://openalex.org/C2777497464","wikidata":"https://www.wikidata.org/wiki/Q418834","display_name":"Spermidine","level":3,"score":0.6308466196060181},{"id":"https://openalex.org/C2780726299","wikidata":"https://www.wikidata.org/wiki/Q3078751","display_name":"Phosphatidylglycerol","level":5,"score":0.6264020800590515},{"id":"https://openalex.org/C2778022156","wikidata":"https://www.wikidata.org/wiki/Q576145","display_name":"Strain (injury)","level":2,"score":0.6120003461837769},{"id":"https://openalex.org/C89423630","wikidata":"https://www.wikidata.org/wiki/Q7193","display_name":"Microbiology","level":1,"score":0.5685783624649048},{"id":"https://openalex.org/C193252679","wikidata":"https://www.wikidata.org/wiki/Q242125","display_name":"Phylogenetic tree","level":3,"score":0.5324882864952087},{"id":"https://openalex.org/C17757408","wikidata":"https://www.wikidata.org/wiki/Q4135516","display_name":"genomic DNA","level":3,"score":0.5131545662879944},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.3123018145561218},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.29260578751564026},{"id":"https://openalex.org/C2778918659","wikidata":"https://www.wikidata.org/wiki/Q186915","display_name":"Phospholipid","level":3,"score":0.2018413543701172},{"id":"https://openalex.org/C2776330855","wikidata":"https://www.wikidata.org/wiki/Q650187","display_name":"Phosphatidylcholine","level":4,"score":0.1353650689125061},{"id":"https://openalex.org/C181199279","wikidata":"https://www.wikidata.org/wiki/Q8047","display_name":"Enzyme","level":2,"score":0.06265920400619507},{"id":"https://openalex.org/C105702510","wikidata":"https://www.wikidata.org/wiki/Q514","display_name":"Anatomy","level":1,"score":0.0},{"id":"https://openalex.org/C41625074","wikidata":"https://www.wikidata.org/wiki/Q176088","display_name":"Membrane","level":2,"score":0.0}],"mesh":[{"descriptor_ui":"D001482","descriptor_name":"Base Composition","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004269","descriptor_name":"DNA, Bacterial","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D005227","descriptor_name":"Fatty Acids","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D005742","descriptor_name":"Gasoline","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D010743","descriptor_name":"Phospholipids","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D010802","descriptor_name":"Phylogeny","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012336","descriptor_name":"RNA, Ribosomal, 16S","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012988","descriptor_name":"Soil Microbiology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012989","descriptor_name":"Soil Pollutants","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D013095","descriptor_name":"Spermidine","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D014451","descriptor_name":"Ubiquinone","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D015373","descriptor_name":"Bacterial Typing Techniques","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D042301","descriptor_name":"Sphingomonadaceae","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":true},{"descriptor_ui":"D042301","descriptor_name":"Sphingomonadaceae","qualifier_ui":"Q000302","qualifier_name":"isolation & purification","is_major_topic":false},{"descriptor_ui":"D056910","descriptor_name":"Republic of Korea","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D059392","descriptor_name":"Petroleum Pollution","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":2,"locations":[{"id":"doi:10.1099/ijsem.0.003514","doi":"https://doi.org/10.1099/ijsem.0.003514","is_oa":false,"landing_page_url":"https://doi.org/10.1099/ijsem.0.003514","pdf_url":null,"source":{"id":"https://openalex.org/S102181007","display_name":"INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY","issn_l":"1466-5026","issn":["1466-5026","1466-5034"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["cwts-core","dongbi-b","doyens","jufo-1","ki-jl-1","medline","norway-1","poland-70","russia-white-list-3","vabb-shw"],"host_organization":"https://openalex.org/P4310320497","host_organization_name":"Microbiology Society","host_organization_lineage":["https://openalex.org/P4310320497"],"host_organization_lineage_names":["Microbiology Society"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"International Journal of Systematic and Evolutionary Microbiology","raw_type":"journal-article"},{"id":"pmid:31169492","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/31169492","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"International journal of systematic and evolutionary microbiology","raw_type":"Journal Article"}],"best_oa_location":null,"sustainable_development_goals":[],"study_designs":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":34,"referenced_works":["https://openalex.org/W602436075","https://openalex.org/W1126029065","https://openalex.org/W1875227226","https://openalex.org/W1913096236","https://openalex.org/W1982168940","https://openalex.org/W1990853496","https://openalex.org/W2021940241","https://openalex.org/W2022474808","https://openalex.org/W2063656542","https://openalex.org/W2097411417","https://openalex.org/W2116206245","https://openalex.org/W2119888547","https://openalex.org/W2124601687","https://openalex.org/W2125411063","https://openalex.org/W2129933858","https://openalex.org/W2130525825","https://openalex.org/W2137237803","https://openalex.org/W2141130336","https://openalex.org/W2145501927","https://openalex.org/W2198708634","https://openalex.org/W2206071891","https://openalex.org/W2311203695","https://openalex.org/W2468649857","https://openalex.org/W2563737033","https://openalex.org/W2579533542","https://openalex.org/W2745289851","https://openalex.org/W2765128598","https://openalex.org/W2788839798","https://openalex.org/W2791279372","https://openalex.org/W2863861732","https://openalex.org/W2928435683","https://openalex.org/W3135316096","https://openalex.org/W4205740969","https://openalex.org/W4243810799"],"related_works":["https://openalex.org/W2781820515","https://openalex.org/W2146331259","https://openalex.org/W2403426934","https://openalex.org/W2397364981","https://openalex.org/W3144931317","https://openalex.org/W2125603845","https://openalex.org/W2763788158","https://openalex.org/W2863861732","https://openalex.org/W7222028858","https://openalex.org/W2154059603"],"abstract_inverted_index":{"A":[0],"Gram-stain-negative,":[1],"strictly":[2],"aerobic":[3],"bacterial":[4],"strain,":[5],"designated":[6],"EO9T,":[7],"was":[8,29,109,145],"isolated":[9],"from":[10],"gasoline-contaminated":[11],"soil":[12],"in":[13,43],"the":[14,44,60,106,139,170,202,208],"Republic":[15],"of":[16,46,105,173,201],"Korea.":[17],"Cells":[18],"were":[19,57,81,92,179],"non-motile":[20],"short":[21],"rods":[22],"showing":[23],"catalase-":[24],"and":[25,42,55,64,78,98,134,156,169,176,181,191],"oxidase-positive":[26],"reactions.":[27],"Growth":[28],"observed":[30],"at":[31,37],"10\u201337":[32],"\u00b0C":[33],"(optimum,":[34],"30":[35],"\u00b0C),":[36],"pH":[38],"6.0\u20139.0":[39],"(pH":[40],"6.5)":[41],"presence":[45],"0\u20130.5":[47],"%":[48,183],"(w/v)":[49],"NaCl":[50],"(0":[51],"%).":[52],"Ubiquinone-10":[53],"(Q-10)":[54],"spermidine":[56],"identified":[58,82],"as":[59,83],"predominant":[61],"respiratory":[62],"quinone":[63],"polyamine,":[65],"respectively.":[66,185],"Summed":[67],"feature":[68,73],"8":[69],"(comprising":[70,75],"C18:1\u03c97c/C18:1\u03c96c),":[71],"summed":[72],"3":[74],"C16:1\u03c97c/C16:1\u03c96c),":[76],"C16:0":[77],"C14:0":[79],"2-OH":[80],"major":[84,89],"cellular":[85],"fatty":[86],"acids.":[87],"The":[88,102,216],"polar":[90],"lipids":[91],"diphosphatidylglycerol,":[93],"phosphatidylethanolamine,":[94],"phosphatidylcholine,":[95],"sphingoglycolipid,":[96],"phosphatidylglycerol":[97],"an":[99],"unidentified":[100],"phospholipid.":[101],"G+C":[103],"content":[104],"genomic":[107],"DNA":[108],"62.8":[110],"mol%.":[111],"Phylogenetic":[112],"analyses":[113],"based":[114],"on":[115,187],"16S":[116],"rRNA":[117],"gene":[118],"sequences":[119],"showed":[120],"that":[121],"strain":[122,167,194,218],"EO9T":[123,144,168,195,220],"formed":[124],"a":[125,198],"tight":[126],"phylogenetic":[127],"lineage":[128],"with":[129],"Sphingobium":[130,135,141,204,210],"xenophagum":[131,151,175],"NBRC":[132,152],"107872T":[133,153],"hydrophobicum":[136,158,178],"C1T":[137,159],"within":[138],"genus":[140,203],".":[142],"Strain":[143],"most":[146],"closely":[147],"related":[148],"to":[149],"S.":[150,157,174,177],"(97.2":[154,160],"%)":[155],"%),":[161],"but":[162],"DNA\u2013DNA":[163],"relatedness":[164],"levels":[165],"between":[166],"type":[171,217],"strains":[172],"37.1":[180],"36.8":[182],",":[184,205],"Based":[186],"its":[188],"phenotypic,":[189],"chemotaxonomic":[190],"molecular":[192],"features,":[193],"clearly":[196],"represents":[197],"novel":[199],"species":[200],"for":[206],"which":[207],"name":[209],"terrigena":[211],"sp.":[212],"nov.":[213],"is":[214,219],"proposed.":[215],"(=KACC":[221],"19523T=JCM":[222],"32762T).":[223]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":2},{"year":2024,"cited_by_count":2},{"year":2023,"cited_by_count":2},{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":3},{"year":2020,"cited_by_count":2},{"year":2019,"cited_by_count":3}],"updated_date":"2026-11-04T10:54:05.112534","created_date":"2019-06-14T00:00:00"}