{"id":"https://openalex.org/W2944597185","doi":"https://doi.org/10.1016/j.tree.2019.04.010","title":"Genome Evolution of Coral Reef Symbionts as Intracellular Residents","display_name":"Genome Evolution of Coral Reef Symbionts as Intracellular Residents","publication_year":2019,"publication_date":"2019-05-10","ids":{"openalex":"https://openalex.org/W2944597185","doi":"https://doi.org/10.1016/j.tree.2019.04.010","mag":"2944597185","pmid":"https://pubmed.ncbi.nlm.nih.gov/31084944"},"language":"en","primary_location":{"id":"doi:10.1016/j.tree.2019.04.010","doi":"https://doi.org/10.1016/j.tree.2019.04.010","is_oa":false,"landing_page_url":"https://doi.org/10.1016/j.tree.2019.04.010","pdf_url":null,"source":{"id":"https://openalex.org/S79131028","display_name":"Trends in Ecology & Evolution","issn_l":"0169-5347","issn":["0169-5347","1872-8383"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["anvur-class-a","anvur-scientific","cwts-core","dongbi-a","doyens","jufo-3","ki-jl-1","medline","norway-1","poland-200","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Trends in Ecology & Evolution","raw_type":"journal-article"},"volume":null,"type":"review","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5011336890","display_name":"Ra\u00fal A. Gonz\u00e1lez\u2010Pech","orcid":"https://orcid.org/0000-0001-9808-297X","observed_orcids":["https://orcid.org/0000-0001-9808-297X"]},"institutions":[{"id":"https://openalex.org/I165143802","display_name":"The University of Queensland","ror":"https://ror.org/00rqy9422","country_code":"AU","type":"education","lineage":["https://openalex.org/I165143802"]},{"id":"https://openalex.org/I4405277047","display_name":"Institute for Molecular Bioscience","ror":"https://ror.org/018kjjj71","country_code":"AU","type":"facility","lineage":["https://openalex.org/I165143802","https://openalex.org/I4405277047"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Ra\u00fal A. Gonz\u00e1lez-Pech","raw_affiliation_strings":["Institute for Molecular Bioscience, The University of Queensland, Brisbane, QLD 4072, Australia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute for Molecular Bioscience, The University of Queensland, Brisbane, QLD 4072, Australia","institution_ids":["https://openalex.org/I165143802","https://openalex.org/I4405277047"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5056926149","display_name":"Debashish Bhattacharya","orcid":"https://orcid.org/0000-0003-0611-1273","observed_orcids":["https://orcid.org/0000-0003-0611-1273"]},"institutions":[{"id":"https://openalex.org/I102322142","display_name":"Rutgers, The State University of New Jersey","ror":"https://ror.org/05vt9qd57","country_code":"US","type":"education","lineage":["https://openalex.org/I102322142"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Debashish Bhattacharya","raw_affiliation_strings":["Department of Biochemistry and Microbiology, Rutgers University, New Brunswick, NJ 08901, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biochemistry and Microbiology, Rutgers University, New Brunswick, NJ 08901, USA","institution_ids":["https://openalex.org/I102322142"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5023552489","display_name":"Mark A. Ragan","orcid":"https://orcid.org/0000-0003-1672-7020","observed_orcids":["https://orcid.org/0000-0003-1672-7020"]},"institutions":[{"id":"https://openalex.org/I165143802","display_name":"The University of Queensland","ror":"https://ror.org/00rqy9422","country_code":"AU","type":"education","lineage":["https://openalex.org/I165143802"]},{"id":"https://openalex.org/I4405277047","display_name":"Institute for Molecular Bioscience","ror":"https://ror.org/018kjjj71","country_code":"AU","type":"facility","lineage":["https://openalex.org/I165143802","https://openalex.org/I4405277047"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Mark A. Ragan","raw_affiliation_strings":["Institute for Molecular Bioscience, The University of Queensland, Brisbane, QLD 4072, Australia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute for Molecular Bioscience, The University of Queensland, Brisbane, QLD 4072, Australia","institution_ids":["https://openalex.org/I165143802","https://openalex.org/I4405277047"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5047935755","display_name":"Cheong Xin Chan","orcid":"https://orcid.org/0000-0002-3729-8176","observed_orcids":["https://orcid.org/0000-0002-3729-8176"]},"institutions":[{"id":"https://openalex.org/I165143802","display_name":"The University of Queensland","ror":"https://ror.org/00rqy9422","country_code":"AU","type":"education","lineage":["https://openalex.org/I165143802"]},{"id":"https://openalex.org/I4405277047","display_name":"Institute for Molecular Bioscience","ror":"https://ror.org/018kjjj71","country_code":"AU","type":"facility","lineage":["https://openalex.org/I165143802","https://openalex.org/I4405277047"]}],"countries":["AU"],"is_corresponding":true,"raw_author_name":"Cheong Xin Chan","raw_affiliation_strings":["Institute for Molecular Bioscience, The University of Queensland, Brisbane, QLD 4072, Australia; School of Chemistry and Molecular Biosciences, The University of Queensland, Brisbane, QLD 4072, Australia. Electronic address: c.chan1@uq.edu.au","Institute for Molecular Bioscience, The University of Queensland, Brisbane, QLD 4072, Australia","School of Chemistry and Molecular Biosciences, The University of Queensland, Brisbane, QLD 4072, Australia"],"raw_orcid":"https://orcid.org/0000-0002-3729-8176","affiliations":[{"raw_affiliation_string":"Institute for Molecular Bioscience, The University of Queensland, Brisbane, QLD 4072, Australia; School of Chemistry and Molecular Biosciences, The University of Queensland, Brisbane, QLD 4072, Australia. Electronic address: c.chan1@uq.edu.au","institution_ids":["https://openalex.org/I165143802","https://openalex.org/I4405277047"]},{"raw_affiliation_string":"Institute for Molecular Bioscience, The University of Queensland, Brisbane, QLD 4072, Australia","institution_ids":["https://openalex.org/I165143802","https://openalex.org/I4405277047"]},{"raw_affiliation_string":"School of Chemistry and Molecular Biosciences, The University of Queensland, Brisbane, QLD 4072, Australia","institution_ids":["https://openalex.org/I165143802"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5047935755"],"corresponding_institution_ids":["https://openalex.org/I165143802","https://openalex.org/I4405277047"],"apc_list":{"value":4000,"currency":"USD","value_usd":4000},"apc_paid":null,"fwci":0.5224,"has_fulltext":false,"cited_by_count":56,"citation_normalized_percentile":{"value":0.50766284,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":93,"max":99},"biblio":{"volume":"34","issue":"9","first_page":"799","last_page":"806"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10341","display_name":"Coral and Marine Ecosystems Studies","score":0.7089999914169312,"subfield":{"id":"https://openalex.org/subfields/2303","display_name":"Ecology"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10341","display_name":"Coral and Marine Ecosystems Studies","score":0.7089999914169312,"subfield":{"id":"https://openalex.org/subfields/2303","display_name":"Ecology"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11879","display_name":"Protist diversity and phylogeny","score":0.2766000032424927,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12142","display_name":"Marine Invertebrate Physiology and Ecology","score":0.00430000014603138,"subfield":{"id":"https://openalex.org/subfields/1911","display_name":"Paleontology"},"field":{"id":"https://openalex.org/fields/19","display_name":"Earth and Planetary Sciences"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/symbiodiniaceae","display_name":"zooxanthellae","score":0.9929999709129333},{"id":"https://openalex.org/keywords/coral-reef-symbionts","display_name":"coral reef symbionts","score":0.7129999995231628},{"id":"https://openalex.org/keywords/genome-evolution","display_name":"genome evolution","score":0.6890000104904175},{"id":"https://openalex.org/keywords/coral-dinoflagellate-symbiosis","display_name":"coral-dinoflagellate symbiosis","score":0.9549999833106995},{"id":"https://openalex.org/keywords/obligate-symbionts","display_name":"obligate symbionts","score":0.9449999928474426},{"id":"https://openalex.org/keywords/sequence-divergence","display_name":"sequence divergence","score":0.8669999837875366}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.8290085792541504},{"id":"https://openalex.org/C43144210","wikidata":"https://www.wikidata.org/wiki/Q121610","display_name":"Symbiosis","level":3,"score":0.820669412612915},{"id":"https://openalex.org/C2780204098","wikidata":"https://www.wikidata.org/wiki/Q120490","display_name":"Dinoflagellate","level":2,"score":0.8051424026489258},{"id":"https://openalex.org/C2776408758","wikidata":"https://www.wikidata.org/wiki/Q10375461","display_name":"Symbiodinium","level":4,"score":0.7713266611099243},{"id":"https://openalex.org/C2779413310","wikidata":"https://www.wikidata.org/wiki/Q19088","display_name":"Eukaryote","level":4,"score":0.7356840968132019},{"id":"https://openalex.org/C79367842","wikidata":"https://www.wikidata.org/wiki/Q11292","display_name":"Coral reef","level":2,"score":0.5348367094993591},{"id":"https://openalex.org/C78458016","wikidata":"https://www.wikidata.org/wiki/Q840400","display_name":"Evolutionary biology","level":1,"score":0.5212550759315491},{"id":"https://openalex.org/C18903297","wikidata":"https://www.wikidata.org/wiki/Q7150","display_name":"Ecology","level":1,"score":0.5123783349990845},{"id":"https://openalex.org/C2777866282","wikidata":"https://www.wikidata.org/wiki/Q220392","display_name":"Zooxanthellae","level":4,"score":0.511851966381073},{"id":"https://openalex.org/C24990904","wikidata":"https://www.wikidata.org/wiki/Q7075144","display_name":"Obligate","level":2,"score":0.5093158483505249},{"id":"https://openalex.org/C77044568","wikidata":"https://www.wikidata.org/wiki/Q184358","display_name":"Reef","level":2,"score":0.49640756845474243},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.4772750735282898},{"id":"https://openalex.org/C103474955","wikidata":"https://www.wikidata.org/wiki/Q568916","display_name":"Coral bleaching","level":3,"score":0.4338933825492859},{"id":"https://openalex.org/C2776817793","wikidata":"https://www.wikidata.org/wiki/Q6553369","display_name":"Lineage (genetic)","level":3,"score":0.4175741374492645},{"id":"https://openalex.org/C143020374","wikidata":"https://www.wikidata.org/wiki/Q2411228","display_name":"Coral","level":2,"score":0.41325515508651733},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.17243897914886475},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.11406344175338745},{"id":"https://openalex.org/C523546767","wikidata":"https://www.wikidata.org/wiki/Q10876","display_name":"Bacteria","level":2,"score":0.0}],"mesh":[{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004141","descriptor_name":"Dinoflagellida","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D013559","descriptor_name":"Symbiosis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016678","descriptor_name":"Genome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D037421","descriptor_name":"Anthozoa","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057894","descriptor_name":"Coral Reefs","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1016/j.tree.2019.04.010","doi":"https://doi.org/10.1016/j.tree.2019.04.010","is_oa":false,"landing_page_url":"https://doi.org/10.1016/j.tree.2019.04.010","pdf_url":null,"source":{"id":"https://openalex.org/S79131028","display_name":"Trends in Ecology & Evolution","issn_l":"0169-5347","issn":["0169-5347","1872-8383"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["anvur-class-a","anvur-scientific","cwts-core","dongbi-a","doyens","jufo-3","ki-jl-1","medline","norway-1","poland-200","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Trends in Ecology & Evolution","raw_type":"journal-article"},{"id":"pmid:31084944","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/31084944","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Trends in ecology & evolution","raw_type":"Journal Article"},{"id":"pmh:oai:alma.01RUT_INST:11664811140004646","doi":null,"is_oa":false,"landing_page_url":"https://scholarship.libraries.rutgers.edu/esploro/outputs/journalArticle/Genome-Evolution-of-Coral-Reef-Symbionts/991031664322704646","pdf_url":null,"source":{"id":"https://openalex.org/S4306401388","display_name":"Rutgers University Community Repository (Rutgers University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I102322142","host_organization_name":"Rutgers, The State University of New Jersey","host_organization_lineage":["https://openalex.org/I102322142"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"text"}],"best_oa_location":null,"sustainable_development_goals":[],"study_designs":[],"awards":[{"id":"https://openalex.org/G1353107232","display_name":"Symbiodinium: the evolutionary transition to coral reef symbiont","funder_award_id":"DP150101875","funder_id":"https://openalex.org/F4320334704","funder_display_name":"Australian Research Council"},{"id":"https://openalex.org/G6175648614","display_name":"Genomics and evolution of symbiont transmission in coral reefs","funder_award_id":"DP190102474","funder_id":"https://openalex.org/F4320334704","funder_display_name":"Australian Research Council"}],"funders":[{"id":"https://openalex.org/F4320320984","display_name":"University of Queensland","ror":"https://ror.org/00rqy9422"},{"id":"https://openalex.org/F4320334704","display_name":"Australian Research Council","ror":"https://ror.org/05mmh0f86"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":60,"referenced_works":["https://openalex.org/W1547205244","https://openalex.org/W1582655487","https://openalex.org/W1621181972","https://openalex.org/W1824133843","https://openalex.org/W1871888161","https://openalex.org/W1951069276","https://openalex.org/W1964563977","https://openalex.org/W1996870212","https://openalex.org/W1998893260","https://openalex.org/W2016588572","https://openalex.org/W2017665352","https://openalex.org/W2019851585","https://openalex.org/W2021862171","https://openalex.org/W2023867827","https://openalex.org/W2026811552","https://openalex.org/W2026999897","https://openalex.org/W2034036140","https://openalex.org/W2034229618","https://openalex.org/W2035318033","https://openalex.org/W2042934377","https://openalex.org/W2045716211","https://openalex.org/W2051588871","https://openalex.org/W2054896894","https://openalex.org/W2062570236","https://openalex.org/W2078842449","https://openalex.org/W2079918368","https://openalex.org/W2086067658","https://openalex.org/W2092604303","https://openalex.org/W2102058094","https://openalex.org/W2102131597","https://openalex.org/W2105337410","https://openalex.org/W2106727650","https://openalex.org/W2107699904","https://openalex.org/W2111075099","https://openalex.org/W2112111732","https://openalex.org/W2113188354","https://openalex.org/W2113867600","https://openalex.org/W2113938590","https://openalex.org/W2115622704","https://openalex.org/W2118479703","https://openalex.org/W2122247301","https://openalex.org/W2122916131","https://openalex.org/W2132496668","https://openalex.org/W2155360453","https://openalex.org/W2160087043","https://openalex.org/W2160201546","https://openalex.org/W2167516980","https://openalex.org/W2170856052","https://openalex.org/W2342961995","https://openalex.org/W2474518231","https://openalex.org/W2563800406","https://openalex.org/W2586322019","https://openalex.org/W2767036434","https://openalex.org/W2794879929","https://openalex.org/W2808216887","https://openalex.org/W2809646241","https://openalex.org/W2872818622","https://openalex.org/W2887754912","https://openalex.org/W2901748461","https://openalex.org/W4388252123"],"related_works":["https://openalex.org/W3153657873","https://openalex.org/W3033377661","https://openalex.org/W2872818622","https://openalex.org/W2563800406","https://openalex.org/W3048278258","https://openalex.org/W2998057196","https://openalex.org/W2764099951","https://openalex.org/W3097346586","https://openalex.org/W2170856052","https://openalex.org/W4295308428"],"abstract_inverted_index":null,"counts_by_year":[{"year":2026,"cited_by_count":3},{"year":2025,"cited_by_count":5},{"year":2024,"cited_by_count":7},{"year":2023,"cited_by_count":11},{"year":2022,"cited_by_count":10},{"year":2021,"cited_by_count":10},{"year":2020,"cited_by_count":7},{"year":2019,"cited_by_count":2}],"updated_date":"2026-11-04T10:54:05.112534","created_date":"2019-05-16T00:00:00"}