{"id":"https://openalex.org/W2913363604","doi":"https://doi.org/10.1002/9781119072799.ch16","title":"COMPARATIVE GENOMICS IN THE ASTERACEAE REVEALS LITTLE EVIDENCE FOR PARALLEL EVOLUTIONARY CHANGE IN INVASIVE TAXA","display_name":"COMPARATIVE GENOMICS IN THE ASTERACEAE REVEALS LITTLE EVIDENCE FOR PARALLEL EVOLUTIONARY CHANGE IN INVASIVE TAXA","publication_year":2016,"publication_date":"2016-07-19","ids":{"openalex":"https://openalex.org/W2913363604","doi":"https://doi.org/10.1002/9781119072799.ch16","mag":"2913363604"},"language":"en","primary_location":{"id":"doi:10.1002/9781119072799.ch16","doi":"https://doi.org/10.1002/9781119072799.ch16","is_oa":false,"landing_page_url":"https://doi.org/10.1002/9781119072799.ch16","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Invasion Genetics","raw_type":"other"},"volume":{"id":"https://openalex.org/W2504242764","display_name":"Invasion Genetics"},"type":"other","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5032305441","display_name":"Kathryn A. Hodgins","orcid":"https://orcid.org/0000-0003-2795-5213","observed_orcids":["https://orcid.org/0000-0003-2795-5213"]},"institutions":[{"id":"https://openalex.org/I56590836","display_name":"Monash University","ror":"https://ror.org/02bfwt286","country_code":"AU","type":"education","lineage":["https://openalex.org/I56590836"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Kathryn A. Hodgins","raw_affiliation_strings":["School of Biological Sciences, Monash University, Clayton, VIC, 3800 Australia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Biological Sciences, Monash University, Clayton, VIC, 3800 Australia","institution_ids":["https://openalex.org/I56590836"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5003653699","display_name":"Dan G. Bock","orcid":"https://orcid.org/0000-0001-7788-1705","observed_orcids":["https://orcid.org/0000-0001-7788-1705"]},"institutions":[{"id":"https://openalex.org/I141945490","display_name":"University of British Columbia","ror":"https://ror.org/03rmrcq20","country_code":"CA","type":"education","lineage":["https://openalex.org/I141945490"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Dan G. Bock","raw_affiliation_strings":["Department of Botany, University of British Columbia, 1316-6270 University Blvd., Vancouver, BC, V6T 1Z4 Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Botany, University of British Columbia, 1316-6270 University Blvd., Vancouver, BC, V6T 1Z4 Canada","institution_ids":["https://openalex.org/I141945490"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5006121885","display_name":"Min A. Hahn","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I141945490","display_name":"University of British Columbia","ror":"https://ror.org/03rmrcq20","country_code":"CA","type":"education","lineage":["https://openalex.org/I141945490"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Min A. Hahn","raw_affiliation_strings":["Department of Botany, University of British Columbia, 1316-6270 University Blvd., Vancouver, BC, V6T 1Z4 Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Botany, University of British Columbia, 1316-6270 University Blvd., Vancouver, BC, V6T 1Z4 Canada","institution_ids":["https://openalex.org/I141945490"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5113681576","display_name":"Sylvia M. Heredia","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I141945490","display_name":"University of British Columbia","ror":"https://ror.org/03rmrcq20","country_code":"CA","type":"education","lineage":["https://openalex.org/I141945490"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Sylvia M. Heredia","raw_affiliation_strings":["Department of Botany, University of British Columbia, 1316-6270 University Blvd., Vancouver, BC, V6T 1Z4 Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Botany, University of British Columbia, 1316-6270 University Blvd., Vancouver, BC, V6T 1Z4 Canada","institution_ids":["https://openalex.org/I141945490"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5049814685","display_name":"Kathryn G. Turner","orcid":"https://orcid.org/0000-0001-8982-0301","observed_orcids":["https://orcid.org/0000-0001-8982-0301"]},"institutions":[{"id":"https://openalex.org/I141945490","display_name":"University of British Columbia","ror":"https://ror.org/03rmrcq20","country_code":"CA","type":"education","lineage":["https://openalex.org/I141945490"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Kathryn G. Turner","raw_affiliation_strings":["Department of Botany, University of British Columbia, 1316-6270 University Blvd., Vancouver, BC, V6T 1Z4 Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Botany, University of British Columbia, 1316-6270 University Blvd., Vancouver, BC, V6T 1Z4 Canada","institution_ids":["https://openalex.org/I141945490"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5087116981","display_name":"Loren H. Rieseberg","orcid":"https://orcid.org/0000-0002-2712-2417","observed_orcids":["https://orcid.org/0000-0002-2712-2417"]},"institutions":[{"id":"https://openalex.org/I141945490","display_name":"University of British Columbia","ror":"https://ror.org/03rmrcq20","country_code":"CA","type":"education","lineage":["https://openalex.org/I141945490"]},{"id":"https://openalex.org/I4210119109","display_name":"Indiana University Bloomington","ror":"https://ror.org/02k40bc56","country_code":"US","type":"education","lineage":["https://openalex.org/I4210119109","https://openalex.org/I592451"]},{"id":"https://openalex.org/I592451","display_name":"Indiana University","ror":"https://ror.org/01kg8sb98","country_code":"US","type":"education","lineage":["https://openalex.org/I592451"]}],"countries":["CA","US"],"is_corresponding":false,"raw_author_name":"Loren H. Rieseberg","raw_affiliation_strings":["Department of Biology, Indiana University, Bloomington, IN, 47405 USA","Department of Botany, University of British Columbia, 1316-6270 University Blvd., Vancouver, BC, V6T 1Z4 Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biology, Indiana University, Bloomington, IN, 47405 USA","institution_ids":["https://openalex.org/I4210119109","https://openalex.org/I592451"]},{"raw_affiliation_string":"Department of Botany, University of British Columbia, 1316-6270 University Blvd., Vancouver, BC, V6T 1Z4 Canada","institution_ids":["https://openalex.org/I141945490"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":4,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":false,"cited_by_count":28,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"283","last_page":"299"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11764","display_name":"Evolution and Genetic Dynamics","score":0.4699999988079071,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11764","display_name":"Evolution and Genetic Dynamics","score":0.4699999988079071,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10385","display_name":"Plant Diversity and Evolution","score":0.24400000274181366,"subfield":{"id":"https://openalex.org/subfields/1105","display_name":"Ecology, Evolution, Behavior and Systematics"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10434","display_name":"Chromosomal and Genetic Variations","score":0.16300000250339508,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/asteraceae","display_name":"Asteraceae","score":0.9810000061988831},{"id":"https://openalex.org/keywords/invasive-plants","display_name":"invasive plants","score":0.8349999785423279},{"id":"https://openalex.org/keywords/parallel-evolution","display_name":"parallel evolution","score":0.8209999799728394},{"id":"https://openalex.org/keywords/positive-selection","display_name":"positive selection","score":0.9629999995231628},{"id":"https://openalex.org/keywords/dn-ds","display_name":"dN/dS","score":0.8259999752044678},{"id":"https://openalex.org/keywords/founder-effect","display_name":"founder effect","score":0.5339999794960022},{"id":"https://openalex.org/keywords/genetic-load","display_name":"genetic load","score":0.843999981880188},{"id":"https://openalex.org/keywords/herbicide-resistance","display_name":"herbicide resistance","score":0.8889999985694885},{"id":"https://openalex.org/keywords/stress-response","display_name":"stress response","score":0.7070000171661377},{"id":"https://openalex.org/keywords/defense-response","display_name":"defense response","score":0.8399999737739563},{"id":"https://openalex.org/keywords/multiple-introductions","display_name":"multiple introductions","score":0.5839999914169312},{"id":"https://openalex.org/keywords/admixture","display_name":"admixture","score":0.6140000224113464}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.850175142288208},{"id":"https://openalex.org/C131892835","wikidata":"https://www.wikidata.org/wiki/Q770985","display_name":"Intraspecific competition","level":2,"score":0.6288976669311523},{"id":"https://openalex.org/C193252679","wikidata":"https://www.wikidata.org/wiki/Q242125","display_name":"Phylogenetic tree","level":3,"score":0.6257939338684082},{"id":"https://openalex.org/C2779040068","wikidata":"https://www.wikidata.org/wiki/Q7229807","display_name":"Population genomics","level":5,"score":0.5726499557495117},{"id":"https://openalex.org/C78458016","wikidata":"https://www.wikidata.org/wiki/Q840400","display_name":"Evolutionary biology","level":1,"score":0.5102119445800781},{"id":"https://openalex.org/C71640776","wikidata":"https://www.wikidata.org/wiki/Q16521","display_name":"Taxon","level":2,"score":0.4977014362812042},{"id":"https://openalex.org/C136020623","wikidata":"https://www.wikidata.org/wiki/Q183368","display_name":"Invasive species","level":2,"score":0.4892113208770752},{"id":"https://openalex.org/C2779878721","wikidata":"https://www.wikidata.org/wiki/Q25400","display_name":"Asteraceae","level":2,"score":0.47007304430007935},{"id":"https://openalex.org/C139807058","wikidata":"https://www.wikidata.org/wiki/Q352374","display_name":"Adaptation (eye)","level":2,"score":0.46105635166168213},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.3943656384944916},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.38499683141708374},{"id":"https://openalex.org/C189206191","wikidata":"https://www.wikidata.org/wiki/Q222046","display_name":"Genomics","level":4,"score":0.34352731704711914},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.20398953557014465},{"id":"https://openalex.org/C18903297","wikidata":"https://www.wikidata.org/wiki/Q7150","display_name":"Ecology","level":1,"score":0.20129141211509705},{"id":"https://openalex.org/C169760540","wikidata":"https://www.wikidata.org/wiki/Q207011","display_name":"Neuroscience","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1002/9781119072799.ch16","doi":"https://doi.org/10.1002/9781119072799.ch16","is_oa":false,"landing_page_url":"https://doi.org/10.1002/9781119072799.ch16","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Invasion Genetics","raw_type":"other"}],"best_oa_location":null,"sustainable_development_goals":[],"study_designs":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":91,"referenced_works":["https://openalex.org/W379564508","https://openalex.org/W791550880","https://openalex.org/W1568423397","https://openalex.org/W1828956777","https://openalex.org/W1936552491","https://openalex.org/W1969042907","https://openalex.org/W1973570734","https://openalex.org/W1976326910","https://openalex.org/W1984516045","https://openalex.org/W1993933579","https://openalex.org/W2001562923","https://openalex.org/W2006682046","https://openalex.org/W2008856488","https://openalex.org/W2009674043","https://openalex.org/W2011657487","https://openalex.org/W2012294035","https://openalex.org/W2016825978","https://openalex.org/W2017777683","https://openalex.org/W2027670153","https://openalex.org/W2029123793","https://openalex.org/W2032802646","https://openalex.org/W2033651971","https://openalex.org/W2033702613","https://openalex.org/W2037405212","https://openalex.org/W2042013167","https://openalex.org/W2042688708","https://openalex.org/W2050047813","https://openalex.org/W2074081170","https://openalex.org/W2079294785","https://openalex.org/W2089335658","https://openalex.org/W2095443145","https://openalex.org/W2096251834","https://openalex.org/W2097730814","https://openalex.org/W2097977090","https://openalex.org/W2100352930","https://openalex.org/W2100740664","https://openalex.org/W2100961025","https://openalex.org/W2101290572","https://openalex.org/W2101443157","https://openalex.org/W2104812548","https://openalex.org/W2105466935","https://openalex.org/W2108781956","https://openalex.org/W2109069692","https://openalex.org/W2109320795","https://openalex.org/W2110065044","https://openalex.org/W2110335151","https://openalex.org/W2111111424","https://openalex.org/W2112868847","https://openalex.org/W2113102010","https://openalex.org/W2119488700","https://openalex.org/W2120024428","https://openalex.org/W2121701144","https://openalex.org/W2124372952","https://openalex.org/W2130037802","https://openalex.org/W2130783248","https://openalex.org/W2130909239","https://openalex.org/W2133437368","https://openalex.org/W2135464230","https://openalex.org/W2135822317","https://openalex.org/W2136135064","https://openalex.org/W2138181932","https://openalex.org/W2143484699","https://openalex.org/W2144907278","https://openalex.org/W2145841734","https://openalex.org/W2146710315","https://openalex.org/W2146987762","https://openalex.org/W2147166558","https://openalex.org/W2149354969","https://openalex.org/W2149900912","https://openalex.org/W2151409320","https://openalex.org/W2156125289","https://openalex.org/W2156173046","https://openalex.org/W2156905979","https://openalex.org/W2158151528","https://openalex.org/W2159368933","https://openalex.org/W2160583673","https://openalex.org/W2161094791","https://openalex.org/W2161352166","https://openalex.org/W2161459691","https://openalex.org/W2162273804","https://openalex.org/W2164239128","https://openalex.org/W2167125536","https://openalex.org/W2167133711","https://openalex.org/W2168038523","https://openalex.org/W2168307546","https://openalex.org/W2168696662","https://openalex.org/W2168816336","https://openalex.org/W2170747616","https://openalex.org/W2472995404","https://openalex.org/W3143569444","https://openalex.org/W4239251887"],"related_works":["https://openalex.org/W2111111424","https://openalex.org/W2805540775","https://openalex.org/W7164838691","https://openalex.org/W7213430510","https://openalex.org/W4404730142","https://openalex.org/W4406428536","https://openalex.org/W6893850841","https://openalex.org/W4293105199","https://openalex.org/W2598920162","https://openalex.org/W6967282523"],"abstract_inverted_index":{"Asteraceae,":[0,22],"the":[1,123,136,152,182,203,213,230],"largest":[2],"family":[3],"of":[4,43,68,78,105,135,151,196,215,229],"flowering":[5],"plants,":[6],"has":[7],"given":[8],"rise":[9],"to":[10,241],"many":[11],"notorious":[12],"invasive":[13,26,90,227],"species.":[14,249],"Using":[15,140],"publicly":[16],"available":[17],"transcriptome":[18],"assemblies":[19],"from":[20,58],"35":[21],"including":[23,167],"six":[24,59,204],"major":[25],"species,":[27,206],"we":[28,50,100,130,143],"examined":[29],"evidence":[30,77,104,115,221],"for":[31,76,103,116,222],"micro-":[32],"and":[33,55,62,98,149,156,172,210,232,245],"macro-evolutionary":[34],"genomic":[35,224],"changes":[36,118,132],"associated":[37],"with":[38,65],"invasion.":[39],"To":[40],"detect":[41],"episodes":[42],"positive":[44,79,145],"selection":[45,80,146],"repeated":[46],"across":[47,86],"multiple":[48,208,236],"introductions,":[49],"conducted":[51],"comparisons":[52],"between":[53],"native":[54,200],"introduced":[56,110,190],"genotypes":[57,191,201],"focal":[60,205],"species":[61,91],"identified":[63,131],"genes":[64,121,153,162],"elevated":[66],"rates":[67],"amino":[69],"acid":[70],"change":[71],"(dN/dS).":[72],"We":[73,112],"then":[74],"looked":[75,102],"at":[81],"a":[82,193],"broader":[83],"phylogenetic":[84],"scale":[85],"all":[87],"taxa.":[88],"As":[89],"may":[92,239],"experience":[93],"founder":[94],"events":[95],"during":[96,243],"colonization":[97],"spread,":[99],"also":[101],"increased":[106],"genetic":[107],"load":[108],"in":[109,119,122,127,133,147,181,202,226,247],"genotypes.":[111],"rarely":[113],"found":[114],"parallel":[117],"orthologous":[120],"intraspecific":[124],"comparisons,":[125,142],"but":[126],"some":[128],"cases":[129],"members":[134],"same":[137],"gene":[138],"family.":[139],"among-species":[141],"detected":[144],"0.003\u20130.69%":[148],"2.4\u20137.8%":[150],"using":[154],"site":[155],"stochastic":[157],"branch-site":[158],"models,":[159],"respectively.":[160],"These":[161],"had":[163],"diverse":[164],"putative":[165],"functions,":[166],"defence":[168],"response,":[169],"stress":[170],"response":[171],"herbicide":[173],"resistance,":[174],"although":[175],"there":[176],"was":[177,186],"no":[178,187],"clear":[179],"pattern":[180],"GO":[183],"terms.":[184],"There":[185],"indication":[188],"that":[189,235],"have":[192],"higher":[194],"proportion":[195],"deleterious":[197],"alleles":[198],"than":[199],"suggesting":[207],"introductions":[209],"admixture":[211],"mitigated":[212],"impact":[214],"drift.":[216],"Our":[217],"findings":[218],"provide":[219],"little":[220],"common":[223],"responses":[225],"taxa":[228],"Asteraceae":[231],"hence":[233],"suggest":[234],"evolutionary":[237],"pathways":[238],"lead":[240],"adaptation":[242],"introduction":[244],"spread":[246],"these":[248]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":2},{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":24}],"updated_date":"2026-10-14T16:39:01.820549","created_date":"2019-02-21T00:00:00"}