{"id":"https://openalex.org/W2909153201","doi":"https://doi.org/10.1101/516146","title":"Probing complexity of microalgae mixtures with novel spectral flow cytometry approach and \u201cvirtual filtering\u201d","display_name":"Probing complexity of microalgae mixtures with novel spectral flow cytometry approach and \u201cvirtual filtering\u201d","publication_year":2019,"publication_date":"2019-01-10","ids":{"openalex":"https://openalex.org/W2909153201","doi":"https://doi.org/10.1101/516146","mag":"2909153201"},"language":"en","primary_location":{"id":"doi:10.1101/516146","doi":"https://doi.org/10.1101/516146","is_oa":true,"landing_page_url":"https://doi.org/10.1101/516146","pdf_url":"https://www.biorxiv.org/content/biorxiv/early/2019/01/10/516146.full.pdf","source":{"id":"https://openalex.org/S4306402567","display_name":"bioRxiv (Cold Spring Harbor Laboratory)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I2750212522","host_organization_name":"Cold Spring Harbor Laboratory","host_organization_lineage":["https://openalex.org/I2750212522"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"bioRxiv","raw_type":"posted-content"},"volume":null,"type":"preprint","is_traditional":true,"indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://www.biorxiv.org/content/biorxiv/early/2019/01/10/516146.full.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5059292423","display_name":"Natasha S. Barteneva","orcid":"https://orcid.org/0000-0002-8109-1754","observed_orcids":["https://orcid.org/0000-0002-8109-1754","https://orcid.org/0000-0002-2499-5175"]},"institutions":[{"id":"https://openalex.org/I60559429","display_name":"Nazarbayev University","ror":"https://ror.org/052bx8q98","country_code":"KZ","type":"education","lineage":["https://openalex.org/I60559429"]}],"countries":["KZ"],"is_corresponding":false,"raw_author_name":"Natasha S. Barteneva","raw_affiliation_strings":["School of Science and Technology, Nazarbayev University, Astana, Kazakhstan","The EREC (Environment and Resource Efficiency Cluster), Nazarbayev University, Astana, Kazakhstan"],"raw_orcid":"https://orcid.org/0000-0002-8109-1754","affiliations":[{"raw_affiliation_string":"School of Science and Technology, Nazarbayev University, Astana, Kazakhstan","institution_ids":["https://openalex.org/I60559429"]},{"raw_affiliation_string":"The EREC (Environment and Resource Efficiency Cluster), Nazarbayev University, Astana, Kazakhstan","institution_ids":["https://openalex.org/I60559429"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5034876352","display_name":"Veronika Dashkova","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I60559429","display_name":"Nazarbayev University","ror":"https://ror.org/052bx8q98","country_code":"KZ","type":"education","lineage":["https://openalex.org/I60559429"]}],"countries":["KZ"],"is_corresponding":false,"raw_author_name":"Veronika Dashkova","raw_affiliation_strings":["School of Science and Technology, Nazarbayev University, Astana, Kazakhstan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Science and Technology, Nazarbayev University, Astana, Kazakhstan","institution_ids":["https://openalex.org/I60559429"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5063099776","display_name":"Ivan A. Vorobjev","orcid":"https://orcid.org/0000-0002-1815-7829","observed_orcids":["https://orcid.org/0000-0002-1815-7829"]},"institutions":[{"id":"https://openalex.org/I60559429","display_name":"Nazarbayev University","ror":"https://ror.org/052bx8q98","country_code":"KZ","type":"education","lineage":["https://openalex.org/I60559429"]}],"countries":["KZ"],"is_corresponding":false,"raw_author_name":"Ivan Vorobjev","raw_affiliation_strings":["National Laboratory Astana, Nazarbayev University, Astana, Kazakhstan","School of Science and Technology, Nazarbayev University, Astana, Kazakhstan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"National Laboratory Astana, Nazarbayev University, Astana, Kazakhstan","institution_ids":["https://openalex.org/I60559429"]},{"raw_affiliation_string":"School of Science and Technology, Nazarbayev University, Astana, Kazakhstan","institution_ids":["https://openalex.org/I60559429"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":[],"corresponding_institution_ids":["https://openalex.org/I60559429"],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":true,"cited_by_count":5,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10236","display_name":"Aquatic Ecosystems and Phytoplankton Dynamics","score":0.46630001068115234,"subfield":{"id":"https://openalex.org/subfields/2304","display_name":"Environmental Chemistry"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10236","display_name":"Aquatic Ecosystems and Phytoplankton Dynamics","score":0.46630001068115234,"subfield":{"id":"https://openalex.org/subfields/2304","display_name":"Environmental Chemistry"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10032","display_name":"Marine Plankton and Biogeochemistry","score":0.274399995803833,"subfield":{"id":"https://openalex.org/subfields/1910","display_name":"Oceanography"},"field":{"id":"https://openalex.org/fields/19","display_name":"Earth and Planetary Sciences"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11879","display_name":"Protist diversity and phylogeny","score":0.056699998676776886,"subfield":{"id":"https://openalex.org/subfields/1105","display_name":"Ecology, Evolution, Behavior and Systematics"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/spectral-flow-cytometry","display_name":"spectral flow cytometry","score":0.9549999833106995},{"id":"https://openalex.org/keywords/microalgae-identification","display_name":"microalgae identification","score":0.7929999828338623},{"id":"https://openalex.org/keywords/phytoplankton-community-composition","display_name":"phytoplankton community structure","score":0.8009999990463257},{"id":"https://openalex.org/keywords/chlorophyll-autofluorescence","display_name":"chlorophyll autofluorescence","score":0.8920000195503235},{"id":"https://openalex.org/keywords/light-scattering","display_name":"light scattering","score":0.5649999976158142},{"id":"https://openalex.org/keywords/phytoplankton-blooms","display_name":"phytoplankton blooms","score":0.8289999961853027}],"concepts":[{"id":"https://openalex.org/C2780892065","wikidata":"https://www.wikidata.org/wiki/Q184755","display_name":"Phytoplankton","level":3,"score":0.7771139144897461},{"id":"https://openalex.org/C559758991","wikidata":"https://www.wikidata.org/wiki/Q37868","display_name":"Algae","level":2,"score":0.6708801984786987},{"id":"https://openalex.org/C120305227","wikidata":"https://www.wikidata.org/wiki/Q326139","display_name":"Algal bloom","level":4,"score":0.5802270770072937},{"id":"https://openalex.org/C2985906921","wikidata":"https://www.wikidata.org/wiki/Q190524","display_name":"Spectral properties","level":2,"score":0.5122312903404236},{"id":"https://openalex.org/C186060115","wikidata":"https://www.wikidata.org/wiki/Q30336093","display_name":"Biological system","level":1,"score":0.48929235339164734},{"id":"https://openalex.org/C71640776","wikidata":"https://www.wikidata.org/wiki/Q16521","display_name":"Taxon","level":2,"score":0.48015230894088745},{"id":"https://openalex.org/C39432304","wikidata":"https://www.wikidata.org/wiki/Q188847","display_name":"Environmental science","level":0,"score":0.4705256223678589},{"id":"https://openalex.org/C62649853","wikidata":"https://www.wikidata.org/wiki/Q199687","display_name":"Remote sensing","level":1,"score":0.4392596483230591},{"id":"https://openalex.org/C2983668108","wikidata":"https://www.wikidata.org/wiki/Q280453","display_name":"Spectral analysis","level":3,"score":0.4250604808330536},{"id":"https://openalex.org/C111368507","wikidata":"https://www.wikidata.org/wiki/Q43518","display_name":"Oceanography","level":1,"score":0.3971903622150421},{"id":"https://openalex.org/C18903297","wikidata":"https://www.wikidata.org/wiki/Q7150","display_name":"Ecology","level":1,"score":0.34674713015556335},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.34031370282173157},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.17932555079460144},{"id":"https://openalex.org/C127313418","wikidata":"https://www.wikidata.org/wiki/Q1069","display_name":"Geology","level":0,"score":0.146436870098114},{"id":"https://openalex.org/C32891209","wikidata":"https://www.wikidata.org/wiki/Q483666","display_name":"Spectroscopy","level":2,"score":0.11856776475906372},{"id":"https://openalex.org/C44870925","wikidata":"https://www.wikidata.org/wiki/Q37547","display_name":"Astrophysics","level":1,"score":0.07214593887329102},{"id":"https://openalex.org/C142796444","wikidata":"https://www.wikidata.org/wiki/Q181394","display_name":"Nutrient","level":2,"score":0.0},{"id":"https://openalex.org/C62520636","wikidata":"https://www.wikidata.org/wiki/Q944","display_name":"Quantum mechanics","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1101/516146","doi":"https://doi.org/10.1101/516146","is_oa":true,"landing_page_url":"https://doi.org/10.1101/516146","pdf_url":"https://www.biorxiv.org/content/biorxiv/early/2019/01/10/516146.full.pdf","source":{"id":"https://openalex.org/S4306402567","display_name":"bioRxiv (Cold Spring Harbor Laboratory)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I2750212522","host_organization_name":"Cold Spring Harbor Laboratory","host_organization_lineage":["https://openalex.org/I2750212522"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"bioRxiv","raw_type":"posted-content"}],"best_oa_location":{"id":"doi:10.1101/516146","doi":"https://doi.org/10.1101/516146","is_oa":true,"landing_page_url":"https://doi.org/10.1101/516146","pdf_url":"https://www.biorxiv.org/content/biorxiv/early/2019/01/10/516146.full.pdf","source":{"id":"https://openalex.org/S4306402567","display_name":"bioRxiv (Cold Spring Harbor Laboratory)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I2750212522","host_organization_name":"Cold Spring Harbor Laboratory","host_organization_lineage":["https://openalex.org/I2750212522"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"bioRxiv","raw_type":"posted-content"},"sustainable_development_goals":[],"study_designs":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320337386","display_name":"Division of Ocean Sciences","ror":"https://ror.org/05wqqhv83"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2909153201.pdf","grobid_xml":"https://content.openalex.org/works/W2909153201.grobid-xml"},"referenced_works_count":23,"referenced_works":["https://openalex.org/W279450640","https://openalex.org/W587633280","https://openalex.org/W1506480265","https://openalex.org/W1604897966","https://openalex.org/W1911272828","https://openalex.org/W1979214843","https://openalex.org/W1994456900","https://openalex.org/W2005912592","https://openalex.org/W2023724845","https://openalex.org/W2024279284","https://openalex.org/W2026914734","https://openalex.org/W2043076395","https://openalex.org/W2051836174","https://openalex.org/W2066282968","https://openalex.org/W2072515394","https://openalex.org/W2095246799","https://openalex.org/W2118419207","https://openalex.org/W2122147704","https://openalex.org/W2160712367","https://openalex.org/W2237605787","https://openalex.org/W2414148266","https://openalex.org/W2488955255","https://openalex.org/W2789436027"],"related_works":["https://openalex.org/W4366353497","https://openalex.org/W2414148266","https://openalex.org/W2024431555","https://openalex.org/W7130431869","https://openalex.org/W3016282641","https://openalex.org/W2019860844","https://openalex.org/W2048592012","https://openalex.org/W2137525336","https://openalex.org/W2066710503","https://openalex.org/W2598425322"],"abstract_inverted_index":{"Abstract":[0],"Fluorescence":[1],"methods":[2],"are":[3],"widely":[4],"applied":[5,92],"for":[6,93],"the":[7,10,30,37,45,68,99,166],"study":[8],"of":[9,18,29,47,57,63,67,76,102,111,125,153,168],"marine":[11],"and":[12,53,81,104,121,144,162,183],"freshwater":[13],"phytoplankton":[14,155,169],"communities.":[15],"However,":[16],"identification":[17],"different":[19],"microalgae":[20,96,126],"populations":[21],"by":[22],"autofluorescent":[23],"pigments":[24],"remains":[25],"a":[26,41,55,150],"challenge":[27],"because":[28],"very":[31],"strong":[32],"signal":[33],"from":[34],"chlorophyll.":[35],"Addressing":[36],"issue":[38],"we":[39],"developed":[40],"novel":[42],"approach":[43,147],"using":[44],"flexibility":[46],"spectral":[48,73,118,140],"flow":[49,141],"cytometry":[50],"analysis":[51,110],"(SFC)":[52],"generated":[54],"matrix":[56,72],"virtual":[58,145],"filters":[59],"(VF)":[60],"capable":[61],"to":[62,131],"differentiating":[64],"non-chlorophyll":[65],"parts":[66],"spectrum.":[69],"Using":[70],"this":[71],"emission":[74,119],"regions":[75],"algae":[77],"species":[78],"were":[79,86,90],"analyzed,":[80],"five":[82],"major":[83,133],"algal":[84,106,113],"taxa":[85,97],"discriminated.":[87],"These":[88],"results":[89,137],"further":[91,129],"tracing":[94],"particular":[95],"in":[98,165],"complex":[100],"mixtures":[101],"laboratory":[103],"environmental":[105],"populations.":[107],"An":[108],"integrated":[109],"single":[112,158],"events":[114],"combined":[115],"with":[116],"unique":[117],"fingerprints":[120],"light":[122],"scattering":[123],"parameters":[124],"can":[127,148],"be":[128,163],"used":[130],"differentiate":[132],"microalgal":[134],"taxa.":[135],"Our":[136],"demonstrate":[138],"that":[139],"cytometer":[142],"(SFC-VF)":[143],"filtering":[146],"provide":[149],"quantitative":[151],"assessing":[152],"heterogenous":[154],"communities":[156],"at":[157],"cell":[159],"level":[160],"spectra":[161],"helpful":[164],"monitoring":[167],"blooms.":[170],"The":[171],"research":[172],"was":[173],"partly":[174],"presented":[175],"during":[176],"AQUAFLUO":[177],"II":[178],"Colloquium":[179],"2017,":[180],"Sydney,":[181],"Australia":[182],"ISAC":[184],"Congress,":[185],"Boston":[186],"2017":[187]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":2},{"year":2019,"cited_by_count":1}],"updated_date":"2026-11-09T13:22:03.289127","created_date":"2019-01-25T00:00:00"}
