{"id":"https://openalex.org/W2901575697","doi":"https://doi.org/10.1016/j.ygeno.2018.11.004","title":"Comparative genome analysis of arsenic reducing, hydrocarbon metabolizing groundwater bacterium Achromobacter sp. KAs 3-5T explains its competitive edge for survival in aquifer environment","display_name":"Comparative genome analysis of arsenic reducing, hydrocarbon metabolizing groundwater bacterium Achromobacter sp. KAs 3-5T explains its competitive edge for survival in aquifer environment","publication_year":2018,"publication_date":"2018-11-13","ids":{"openalex":"https://openalex.org/W2901575697","doi":"https://doi.org/10.1016/j.ygeno.2018.11.004","mag":"2901575697","pmid":"https://pubmed.ncbi.nlm.nih.gov/30445215"},"language":"en","primary_location":{"id":"doi:10.1016/j.ygeno.2018.11.004","doi":"https://doi.org/10.1016/j.ygeno.2018.11.004","is_oa":true,"landing_page_url":"https://doi.org/10.1016/j.ygeno.2018.11.004","pdf_url":"https://www.sciencedirect.com/science/article/pii/S088875431830421X/pdf","source":{"id":"https://openalex.org/S146035217","display_name":"Genomics","issn_l":"0888-7543","issn":["0888-7543","1089-8646"],"is_oa":false,"is_in_doaj":true,"is_core":true,"listed_in":["cwts-core","doaj","dongbi-c","jufo-1","ki-jl-1","medline","norway-1","oarl","poland-100"],"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Genomics","raw_type":"journal-article"},"volume":null,"type":"article","is_traditional":true,"indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://www.sciencedirect.com/science/article/pii/S088875431830421X/pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5068618645","display_name":"Balaram Mohapatra","orcid":"https://orcid.org/0000-0002-8541-7176","observed_orcids":["https://orcid.org/0000-0002-8541-7176"]},"institutions":[{"id":"https://openalex.org/I145894827","display_name":"Indian Institute of Technology Kharagpur","ror":"https://ror.org/03w5sq511","country_code":"IN","type":"education","lineage":["https://openalex.org/I145894827"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Balaram Mohapatra","raw_affiliation_strings":["Environmental Microbiology and Genomics Laboratory, Department of Biotechnology, Indian Institute of Technology Kharagpur, Kharagpur, 721302, West Bengal, India"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Environmental Microbiology and Genomics Laboratory, Department of Biotechnology, Indian Institute of Technology Kharagpur, Kharagpur, 721302, West Bengal, India","institution_ids":["https://openalex.org/I145894827"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5064687981","display_name":"Sufia K. Kazy","orcid":"https://orcid.org/0000-0002-7233-8268","observed_orcids":["https://orcid.org/0000-0002-7233-8268"]},"institutions":[{"id":"https://openalex.org/I155837530","display_name":"National Institute of Technology Durgapur","ror":"https://ror.org/04ds0jm32","country_code":"IN","type":"education","lineage":["https://openalex.org/I155837530"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Sufia K. Kazy","raw_affiliation_strings":["Department of Biotechnology, National Institute of Technology Durgapur, Durgapur 713209, West Bengal, India"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biotechnology, National Institute of Technology Durgapur, Durgapur 713209, West Bengal, India","institution_ids":["https://openalex.org/I155837530"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5046436034","display_name":"Pinaki Sar","orcid":"https://orcid.org/0000-0001-8538-2527","observed_orcids":["https://orcid.org/0000-0001-8538-2527"]},"institutions":[{"id":"https://openalex.org/I145894827","display_name":"Indian Institute of Technology Kharagpur","ror":"https://ror.org/03w5sq511","country_code":"IN","type":"education","lineage":["https://openalex.org/I145894827"]}],"countries":["IN"],"is_corresponding":true,"raw_author_name":"Pinaki Sar","raw_affiliation_strings":["Environmental Microbiology and Genomics Laboratory, Department of Biotechnology, Indian Institute of Technology Kharagpur, Kharagpur, 721302, West Bengal, India. Electronic address: psar@bt.iitkgp.ac.in"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Environmental Microbiology and Genomics Laboratory, Department of Biotechnology, Indian Institute of Technology Kharagpur, Kharagpur, 721302, West Bengal, India. Electronic address: psar@bt.iitkgp.ac.in","institution_ids":["https://openalex.org/I145894827"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5046436034"],"corresponding_institution_ids":["https://openalex.org/I145894827"],"apc_list":{"value":2980,"currency":"USD","value_usd":2980},"apc_paid":null,"fwci":1.3847,"has_fulltext":true,"cited_by_count":28,"citation_normalized_percentile":{"value":0.74421699,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":88,"max":98},"biblio":{"volume":"111","issue":"6","first_page":"1604","last_page":"1619"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10710","display_name":"Arsenic contamination and mitigation","score":0.5195000171661377,"subfield":{"id":"https://openalex.org/subfields/2304","display_name":"Environmental Chemistry"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10710","display_name":"Arsenic contamination and mitigation","score":0.5195000171661377,"subfield":{"id":"https://openalex.org/subfields/2304","display_name":"Environmental Chemistry"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.3698999881744385,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10324","display_name":"Microbial bioremediation and biosurfactants","score":0.0357000008225441,"subfield":{"id":"https://openalex.org/subfields/2310","display_name":"Pollution"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/arsenic-reduction","display_name":"arsenic reduction","score":0.9539999961853027},{"id":"https://openalex.org/keywords/hydrocarbon-metabolism","display_name":"hydrocarbon metabolism","score":0.7080000042915344},{"id":"https://openalex.org/keywords/groundwater-bacteria","display_name":"groundwater bacteria","score":0.9629999995231628},{"id":"https://openalex.org/keywords/pan-genome","display_name":"pan-genome","score":0.765999972820282},{"id":"https://openalex.org/keywords/horizontal-gene-transfer","display_name":"horizontal gene transfer","score":0.8730000257492065},{"id":"https://openalex.org/keywords/aromatic-compound-degradation","display_name":"aromatic compound degradation","score":0.47999998927116394},{"id":"https://openalex.org/keywords/iron-transformation","display_name":"iron transformation","score":0.574999988079071},{"id":"https://openalex.org/keywords/denitrification","display_name":"denitrification","score":0.984000027179718},{"id":"https://openalex.org/keywords/novel-bacterial-species","display_name":"novel bacterial species","score":0.49000000953674316}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.8137835264205933},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.5283048152923584},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.5102448463439941},{"id":"https://openalex.org/C2777485300","wikidata":"https://www.wikidata.org/wiki/Q5252213","display_name":"Dehalogenase","level":3,"score":0.46611884236335754},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.3322879672050476}],"mesh":[{"descriptor_ui":"D001151","descriptor_name":"Arsenic","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D006838","descriptor_name":"Hydrocarbons","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D010084","descriptor_name":"Oxidation-Reduction","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014871","descriptor_name":"Water Microbiology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016680","descriptor_name":"Genome, Bacterial","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D042402","descriptor_name":"Achromobacter","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D042402","descriptor_name":"Achromobacter","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D060587","descriptor_name":"Groundwater","qualifier_ui":"Q000382","qualifier_name":"microbiology","is_major_topic":true}],"locations_count":2,"locations":[{"id":"doi:10.1016/j.ygeno.2018.11.004","doi":"https://doi.org/10.1016/j.ygeno.2018.11.004","is_oa":true,"landing_page_url":"https://doi.org/10.1016/j.ygeno.2018.11.004","pdf_url":"https://www.sciencedirect.com/science/article/pii/S088875431830421X/pdf","source":{"id":"https://openalex.org/S146035217","display_name":"Genomics","issn_l":"0888-7543","issn":["0888-7543","1089-8646"],"is_oa":false,"is_in_doaj":true,"is_core":true,"listed_in":["cwts-core","doaj","dongbi-c","jufo-1","ki-jl-1","medline","norway-1","oarl","poland-100"],"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Genomics","raw_type":"journal-article"},{"id":"pmid:30445215","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/30445215","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Genomics","raw_type":"Comparative Study"}],"best_oa_location":{"id":"doi:10.1016/j.ygeno.2018.11.004","doi":"https://doi.org/10.1016/j.ygeno.2018.11.004","is_oa":true,"landing_page_url":"https://doi.org/10.1016/j.ygeno.2018.11.004","pdf_url":"https://www.sciencedirect.com/science/article/pii/S088875431830421X/pdf","source":{"id":"https://openalex.org/S146035217","display_name":"Genomics","issn_l":"0888-7543","issn":["0888-7543","1089-8646"],"is_oa":false,"is_in_doaj":true,"is_core":true,"listed_in":["cwts-core","doaj","dongbi-c","jufo-1","ki-jl-1","medline","norway-1","oarl","poland-100"],"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Genomics","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.7778000235557556,"display_name":"Clean water and sanitation","id":"https://metadata.un.org/sdg/6"}],"study_designs":[],"awards":[{"id":"https://openalex.org/G5517628758","display_name":null,"funder_award_id":"38/1314/11/EMR II","funder_id":"https://openalex.org/F4320320721","funder_display_name":"Council of Scientific and Industrial Research, India"}],"funders":[{"id":"https://openalex.org/F4320320719","display_name":"Department of Science and Technology, Ministry of Science and Technology, India","ror":"https://ror.org/0101xrq71"},{"id":"https://openalex.org/F4320320721","display_name":"Council of Scientific and Industrial Research, India","ror":"https://ror.org/021wm7p51"},{"id":"https://openalex.org/F4320335900","display_name":"Central Mechanical Engineering Research Institute, Council of Scientific and Industrial Research","ror":"https://ror.org/059h0ng81"},{"id":"https://openalex.org/F4320336003","display_name":"Sponsored Research and Industrial Consultancy","ror":null}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2901575697.pdf","grobid_xml":"https://content.openalex.org/works/W2901575697.grobid-xml"},"referenced_works_count":109,"referenced_works":["https://openalex.org/W1558958162","https://openalex.org/W1842741786","https://openalex.org/W1863433594","https://openalex.org/W1921607560","https://openalex.org/W1964407824","https://openalex.org/W1967306518","https://openalex.org/W1974303188","https://openalex.org/W1975956872","https://openalex.org/W1978895830","https://openalex.org/W1990509178","https://openalex.org/W1990879843","https://openalex.org/W1991604124","https://openalex.org/W1993270428","https://openalex.org/W1994567608","https://openalex.org/W1994789400","https://openalex.org/W2000853750","https://openalex.org/W2002524014","https://openalex.org/W2003221509","https://openalex.org/W2005399775","https://openalex.org/W2010180302","https://openalex.org/W2012678147","https://openalex.org/W2013001127","https://openalex.org/W2014439357","https://openalex.org/W2016936942","https://openalex.org/W2017380600","https://openalex.org/W2023323766","https://openalex.org/W2028188950","https://openalex.org/W2032499422","https://openalex.org/W2034073993","https://openalex.org/W2037591442","https://openalex.org/W2038376644","https://openalex.org/W2038615842","https://openalex.org/W2039710241","https://openalex.org/W2040257282","https://openalex.org/W2041757430","https://openalex.org/W2042218199","https://openalex.org/W2054779467","https://openalex.org/W2055615325","https://openalex.org/W2057463173","https://openalex.org/W2064912379","https://openalex.org/W2064971934","https://openalex.org/W2065151808","https://openalex.org/W2068374778","https://openalex.org/W2068756458","https://openalex.org/W2068966296","https://openalex.org/W2075371279","https://openalex.org/W2079273226","https://openalex.org/W2079308952","https://openalex.org/W2081464885","https://openalex.org/W2086612777","https://openalex.org/W2086936904","https://openalex.org/W2091328482","https://openalex.org/W2092472293","https://openalex.org/W2093610003","https://openalex.org/W2094402704","https://openalex.org/W2097706568","https://openalex.org/W2103695796","https://openalex.org/W2107059050","https://openalex.org/W2108509410","https://openalex.org/W2110344417","https://openalex.org/W2114086524","https://openalex.org/W2118086660","https://openalex.org/W2118766743","https://openalex.org/W2119490692","https://openalex.org/W2121055398","https://openalex.org/W2122591311","https://openalex.org/W2125084052","https://openalex.org/W2128753028","https://openalex.org/W2131448427","https://openalex.org/W2132895747","https://openalex.org/W2134375163","https://openalex.org/W2139183861","https://openalex.org/W2142449739","https://openalex.org/W2143510420","https://openalex.org/W2148908259","https://openalex.org/W2149602337","https://openalex.org/W2150289800","https://openalex.org/W2153148746","https://openalex.org/W2157267947","https://openalex.org/W2158332104","https://openalex.org/W2159706929","https://openalex.org/W2171805317","https://openalex.org/W2171872970","https://openalex.org/W2173585126","https://openalex.org/W2190899333","https://openalex.org/W2206071891","https://openalex.org/W2255532816","https://openalex.org/W2292044244","https://openalex.org/W2311203695","https://openalex.org/W2313006021","https://openalex.org/W2321020508","https://openalex.org/W2327069883","https://openalex.org/W2337494053","https://openalex.org/W2340958225","https://openalex.org/W2416055136","https://openalex.org/W2510047477","https://openalex.org/W2514271380","https://openalex.org/W2523121431","https://openalex.org/W2599814158","https://openalex.org/W2605463817","https://openalex.org/W2606708387","https://openalex.org/W2617801499","https://openalex.org/W2727785948","https://openalex.org/W2781763834","https://openalex.org/W2793876722","https://openalex.org/W2798032887","https://openalex.org/W2800371345","https://openalex.org/W2949669616","https://openalex.org/W4230547244"],"related_works":["https://openalex.org/W2771338591","https://openalex.org/W2800371345","https://openalex.org/W2523121431","https://openalex.org/W2793876722","https://openalex.org/W4405019751","https://openalex.org/W2898824114","https://openalex.org/W3100374365","https://openalex.org/W2068966296","https://openalex.org/W4220973398","https://openalex.org/W3049083450"],"abstract_inverted_index":null,"counts_by_year":[{"year":2026,"cited_by_count":2},{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":5},{"year":2023,"cited_by_count":4},{"year":2022,"cited_by_count":3},{"year":2021,"cited_by_count":5},{"year":2020,"cited_by_count":6},{"year":2019,"cited_by_count":1},{"year":2016,"cited_by_count":1}],"updated_date":"2026-11-13T13:42:25.865203","created_date":"2018-11-29T00:00:00"}
