{"id":"https://openalex.org/W2884631095","doi":"https://doi.org/10.1371/journal.pcbi.1006340","title":"An enormous potential for niche construction through bacterial cross-feeding in a homogeneous environment","display_name":"An enormous potential for niche construction through bacterial cross-feeding in a homogeneous environment","publication_year":2018,"publication_date":"2018-07-24","ids":{"openalex":"https://openalex.org/W2884631095","doi":"https://doi.org/10.1371/journal.pcbi.1006340","mag":"2884631095","pmid":"https://pubmed.ncbi.nlm.nih.gov/30040834","pmcid":"https://www.ncbi.nlm.nih.gov/pmc/articles/6080805"},"language":"en","primary_location":{"id":"doi:10.1371/journal.pcbi.1006340","doi":"https://doi.org/10.1371/journal.pcbi.1006340","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1006340","pdf_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1006340&type=printable","source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["anvur-scientific","ccf-b","cwts-core","doaj","dongbi-b","doyens","jufo-3","ki-jl-2","medline","norway-2","oarl","poland-140","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS Computational Biology","raw_type":"journal-article"},"volume":null,"type":"article","indexed_in":["crossref","datacite","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1006340&type=printable","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5077649516","display_name":"Magdalena San Rom\u00e1n","orcid":"https://orcid.org/0000-0002-2593-7727","observed_orcids":["https://orcid.org/0000-0002-2593-7727"]},"institutions":[{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"nonprofit","lineage":["https://openalex.org/I12708293"]},{"id":"https://openalex.org/I202697423","display_name":"University of Zurich","ror":"https://ror.org/02crff812","country_code":"CH","type":"education","lineage":["https://openalex.org/I202697423"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Magdalena San Roman","raw_affiliation_strings":["Department of Evolutionary Biology and Environmental Studies, University of Zurich, Zurich, Switzerland","Swiss Institute of Bioinformatics, Lausanne, Switzerland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Evolutionary Biology and Environmental Studies, University of Zurich, Zurich, Switzerland","institution_ids":["https://openalex.org/I202697423"]},{"raw_affiliation_string":"Swiss Institute of Bioinformatics, Lausanne, Switzerland","institution_ids":["https://openalex.org/I12708293"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5079730045","display_name":"Andreas Wagner","orcid":"https://orcid.org/0000-0003-4299-3840","observed_orcids":["https://orcid.org/0000-0003-4299-3840"]},"institutions":[{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"nonprofit","lineage":["https://openalex.org/I12708293"]},{"id":"https://openalex.org/I1308548392","display_name":"Santa Fe Institute","ror":"https://ror.org/01arysc35","country_code":"US","type":"funder","lineage":["https://openalex.org/I1308548392"]},{"id":"https://openalex.org/I202697423","display_name":"University of Zurich","ror":"https://ror.org/02crff812","country_code":"CH","type":"education","lineage":["https://openalex.org/I202697423"]}],"countries":["CH","US"],"is_corresponding":true,"raw_author_name":"Andreas Wagner","raw_affiliation_strings":["Department of Evolutionary Biology and Environmental Studies, University of Zurich, Zurich, Switzerland","Swiss Institute of Bioinformatics, Lausanne, Switzerland","The Santa Fe Institute, Santa Fe, New Mexico, United States of America"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Evolutionary Biology and Environmental Studies, University of Zurich, Zurich, Switzerland","institution_ids":["https://openalex.org/I202697423"]},{"raw_affiliation_string":"Swiss Institute of Bioinformatics, Lausanne, Switzerland","institution_ids":["https://openalex.org/I12708293"]},{"raw_affiliation_string":"The Santa Fe Institute, Santa Fe, New Mexico, United States of America","institution_ids":["https://openalex.org/I1308548392"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5079730045"],"corresponding_institution_ids":["https://openalex.org/I12708293","https://openalex.org/I1308548392","https://openalex.org/I202697423"],"apc_list":{"value":3043,"currency":"USD","value_usd":3043},"apc_paid":{"value":3043,"currency":"USD","value_usd":3043},"fwci":2.3576,"has_fulltext":true,"cited_by_count":85,"citation_normalized_percentile":{"value":0.90106619,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":100},"biblio":{"volume":"14","issue":"7","first_page":"e1006340","last_page":"e1006340"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10932","display_name":"Microbial Metabolic Engineering and Bioproduction","score":0.8862000107765198,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10932","display_name":"Microbial Metabolic Engineering and Bioproduction","score":0.8862000107765198,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11764","display_name":"Evolution and Genetic Dynamics","score":0.093299999833107,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10120","display_name":"Bacterial Genetics and Biotechnology","score":0.002300000051036477,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/niche-construction","display_name":"niche construction","score":0.902999997138977},{"id":"https://openalex.org/keywords/escherichia-coli","display_name":"Escherichia coli","score":0.9459999799728394},{"id":"https://openalex.org/keywords/acetate","display_name":"acetate","score":0.6809999942779541},{"id":"https://openalex.org/keywords/genome-scale-metabolic-models","display_name":"genome-scale metabolic models","score":0.6809999942779541},{"id":"https://openalex.org/keywords/dynamic-flux-balance-analysis","display_name":"dynamic flux balance analysis","score":0.9070000052452087},{"id":"https://openalex.org/keywords/homogeneous-environment","display_name":"homogeneous environment","score":0.5440000295639038},{"id":"https://openalex.org/keywords/glucose-metabolism","display_name":"glucose metabolism","score":0.5070000290870667}],"concepts":[{"id":"https://openalex.org/C102715595","wikidata":"https://www.wikidata.org/wiki/Q172861","display_name":"Ecological niche","level":3,"score":0.9220861792564392},{"id":"https://openalex.org/C153991713","wikidata":"https://www.wikidata.org/wiki/Q17142856","display_name":"Niche","level":2,"score":0.8514043092727661},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.7106292843818665},{"id":"https://openalex.org/C2982740256","wikidata":"https://www.wikidata.org/wiki/Q56064425","display_name":"Carbon source","level":2,"score":0.595801055431366},{"id":"https://openalex.org/C66882249","wikidata":"https://www.wikidata.org/wiki/Q169336","display_name":"Homogeneous","level":2,"score":0.5549376010894775},{"id":"https://openalex.org/C547475151","wikidata":"https://www.wikidata.org/wiki/Q25419","display_name":"Escherichia coli","level":3,"score":0.5359407663345337},{"id":"https://openalex.org/C78991832","wikidata":"https://www.wikidata.org/wiki/Q3027700","display_name":"Niche differentiation","level":3,"score":0.5080006718635559},{"id":"https://openalex.org/C2993678126","wikidata":"https://www.wikidata.org/wiki/Q167751","display_name":"Carbon flux","level":3,"score":0.5064347982406616},{"id":"https://openalex.org/C18903297","wikidata":"https://www.wikidata.org/wiki/Q7150","display_name":"Ecology","level":1,"score":0.4925921559333801},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.29463160037994385},{"id":"https://openalex.org/C110872660","wikidata":"https://www.wikidata.org/wiki/Q37813","display_name":"Ecosystem","level":2,"score":0.27397865056991577},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.22272047400474548},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.1651330590248108},{"id":"https://openalex.org/C185933670","wikidata":"https://www.wikidata.org/wiki/Q52105","display_name":"Habitat","level":2,"score":0.12571778893470764},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0},{"id":"https://openalex.org/C97355855","wikidata":"https://www.wikidata.org/wiki/Q11473","display_name":"Thermodynamics","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000073930","descriptor_name":"Biological Coevolution","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D002244","descriptor_name":"Carbon","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D004926","descriptor_name":"Escherichia coli","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D004926","descriptor_name":"Escherichia coli","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D004926","descriptor_name":"Escherichia coli","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":true},{"descriptor_ui":"D005285","descriptor_name":"Fermentation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005798","descriptor_name":"Genes, Bacterial","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005947","descriptor_name":"Glucose","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D014644","descriptor_name":"Genetic Variation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017753","descriptor_name":"Ecosystem","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019149","descriptor_name":"Bioreactors","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D044822","descriptor_name":"Biodiversity","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D053858","descriptor_name":"Metabolic Networks and Pathways","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":10,"locations":[{"id":"doi:10.1371/journal.pcbi.1006340","doi":"https://doi.org/10.1371/journal.pcbi.1006340","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1006340","pdf_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1006340&type=printable","source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["anvur-scientific","ccf-b","cwts-core","doaj","dongbi-b","doyens","jufo-3","ki-jl-2","medline","norway-2","oarl","poland-140","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS Computational Biology","raw_type":"journal-article"},{"id":"pmh:oai:europepmc.org:5039899","doi":null,"is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/6080805","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":null,"raw_type":"Text"},{"id":"pmh:oai:pubmedcentral.nih.gov:6080805","doi":null,"is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/6080805","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLoS Comput Biol","raw_type":"Text"},{"id":"pmid:30040834","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/30040834","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLoS computational biology","raw_type":"Journal Article"},{"id":"pmh:oai:www.zora.uzh.ch:167218","doi":null,"is_oa":true,"landing_page_url":"https://www.zora.uzh.ch/id/eprint/167218/8/journal.pcbi.1006340.pdf","pdf_url":"https://www.zora.uzh.ch/id/eprint/167218/8/journal.pcbi.1006340.pdf","source":{"id":"https://openalex.org/S4306401281","display_name":"Zurich Open Repository and Archive (University of Zurich)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I202697423","host_organization_name":"University of Zurich","host_organization_lineage":["https://openalex.org/I202697423"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"acceptedVersion","is_accepted":true,"is_published":false,"raw_source_name":"San Roman, Magdalena; Wagner, Andreas (2018). An enormous potential for niche construction through bacterial cross-feeding in a homogeneous environment. PLoS Computational Biology, 14(7):e1006340.","raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:doaj.org/article:42178f79ff384efb981889e8ce63158c","doi":null,"is_oa":true,"landing_page_url":"https://doaj.org/article/42178f79ff384efb981889e8ce63158c","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"PLoS Computational Biology, Vol 14, Iss 7, p e1006340 (2018)","raw_type":"article"},{"id":"pmh:oai:ebiltegia.mondragon.edu:20.500.11984/14474","doi":null,"is_oa":true,"landing_page_url":"https://hdl.handle.net/20.500.11984/14474","pdf_url":null,"source":{"id":"https://openalex.org/S4377196532","display_name":"eRepository Mondragon University (Mondragon University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I162361429","host_organization_name":"Mondragon Unibertsitatea","host_organization_lineage":["https://openalex.org/I162361429"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"PLOS Computational Biology n. 7, vol. 14, n. art. e1006340","raw_type":null},{"id":"pmh:oai:figshare.com:article/6855344","doi":null,"is_oa":true,"landing_page_url":"https://figshare.com/articles/dataset/An_enormous_potential_for_niche_construction_through_bacterial_cross-feeding_in_a_homogeneous_environment/6855344","pdf_url":null,"source":{"id":"https://openalex.org/S4377196282","display_name":"Figshare","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I4210132348","host_organization_name":"Figshare (United Kingdom)","host_organization_lineage":["https://openalex.org/I4210132348"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Dataset"},{"id":"pmh:oai:www.zora.uzh.ch:20.500.14742/154769","doi":null,"is_oa":true,"landing_page_url":"https://www.zora.uzh.ch/handle/20.500.14742/154769","pdf_url":null,"source":{"id":"https://openalex.org/S4306401281","display_name":"Zurich Open Repository and Archive (University of Zurich)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I202697423","host_organization_name":"University of Zurich","host_organization_lineage":["https://openalex.org/I202697423"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"San Roman, M., & Wagner, A. (2018). An enormous potential for niche construction through bacterial cross-feeding in a homogeneous environment. PLoS Computational Biology, 14, e1006340. https://doi.org/10.1371/journal.pcbi.1006340","raw_type":"Journal Article"},{"id":"doi:10.5167/uzh-167218","doi":"https://doi.org/10.5167/uzh-167218","is_oa":true,"landing_page_url":"https://doi.org/10.5167/uzh-167218","pdf_url":null,"source":{"id":"https://openalex.org/S4306401281","display_name":"Zurich Open Repository and Archive (University of Zurich)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I202697423","host_organization_name":"University of Zurich","host_organization_lineage":["https://openalex.org/I202697423"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"JournalArticle"}],"best_oa_location":{"id":"doi:10.1371/journal.pcbi.1006340","doi":"https://doi.org/10.1371/journal.pcbi.1006340","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1006340","pdf_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1006340&type=printable","source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["anvur-scientific","ccf-b","cwts-core","doaj","dongbi-b","doyens","jufo-3","ki-jl-2","medline","norway-2","oarl","poland-140","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS Computational Biology","raw_type":"journal-article"},"sustainable_development_goals":[],"study_designs":[],"awards":[{"id":"https://openalex.org/G1835917608","display_name":null,"funder_award_id":"739874","funder_id":"https://openalex.org/F4320320924","funder_display_name":"Schweizerischer Nationalfonds zur F\u00f6rderung der Wissenschaftlichen Forschung"},{"id":"https://openalex.org/G3215241047","display_name":null,"funder_award_id":"31003A_172887","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G8012102804","display_name":"Robustness and weakened selection in the adaptive evolution of fluorescent proteins","funder_award_id":"172887","funder_id":"https://openalex.org/F4320320924","funder_display_name":"Schweizerischer Nationalfonds zur F\u00f6rderung der Wissenschaftlichen Forschung"}],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"},{"id":"https://openalex.org/F4320320924","display_name":"Schweizerischer Nationalfonds zur F\u00f6rderung der Wissenschaftlichen Forschung","ror":"https://ror.org/00yjd3n13"},{"id":"https://openalex.org/F4320323874","display_name":"Universit\u00e4t Z\u00fcrich","ror":"https://ror.org/02crff812"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2884631095.pdf","grobid_xml":"https://content.openalex.org/works/W2884631095.grobid-xml"},"referenced_works_count":106,"referenced_works":["https://openalex.org/W1543750907","https://openalex.org/W1583030352","https://openalex.org/W1595110651","https://openalex.org/W1600814660","https://openalex.org/W1664199649","https://openalex.org/W1822648038","https://openalex.org/W1824196995","https://openalex.org/W1941446062","https://openalex.org/W1966822128","https://openalex.org/W1967190757","https://openalex.org/W1969699984","https://openalex.org/W1970049209","https://openalex.org/W1974183989","https://openalex.org/W1978117785","https://openalex.org/W1979887297","https://openalex.org/W1982013068","https://openalex.org/W1985048665","https://openalex.org/W1986748260","https://openalex.org/W1992652075","https://openalex.org/W1992738052","https://openalex.org/W1994134392","https://openalex.org/W2002504483","https://openalex.org/W2002635898","https://openalex.org/W2007579824","https://openalex.org/W2009837386","https://openalex.org/W2010534192","https://openalex.org/W2015151053","https://openalex.org/W2019944969","https://openalex.org/W2022012525","https://openalex.org/W2022852066","https://openalex.org/W2024666421","https://openalex.org/W2025663053","https://openalex.org/W2029741845","https://openalex.org/W2030776070","https://openalex.org/W2031319125","https://openalex.org/W2041988303","https://openalex.org/W2043703123","https://openalex.org/W2047195788","https://openalex.org/W2048465561","https://openalex.org/W2053670382","https://openalex.org/W2061700929","https://openalex.org/W2071952329","https://openalex.org/W2075283200","https://openalex.org/W2076092328","https://openalex.org/W2078355959","https://openalex.org/W2079531107","https://openalex.org/W2081414096","https://openalex.org/W2084516445","https://openalex.org/W2085661494","https://openalex.org/W2086929273","https://openalex.org/W2088443113","https://openalex.org/W2089449076","https://openalex.org/W2089938084","https://openalex.org/W2098544815","https://openalex.org/W2102681753","https://openalex.org/W2106279720","https://openalex.org/W2111381495","https://openalex.org/W2113719650","https://openalex.org/W2115279937","https://openalex.org/W2115419697","https://openalex.org/W2117737711","https://openalex.org/W2122093325","https://openalex.org/W2123935787","https://openalex.org/W2124019798","https://openalex.org/W2124737787","https://openalex.org/W2125327011","https://openalex.org/W2131223372","https://openalex.org/W2137266088","https://openalex.org/W2140937954","https://openalex.org/W2143528261","https://openalex.org/W2143861551","https://openalex.org/W2149155984","https://openalex.org/W2151999472","https://openalex.org/W2152538010","https://openalex.org/W2157258388","https://openalex.org/W2158883833","https://openalex.org/W2159476908","https://openalex.org/W2164296191","https://openalex.org/W2164420317","https://openalex.org/W2165113728","https://openalex.org/W2170427655","https://openalex.org/W2170655082","https://openalex.org/W2174328995","https://openalex.org/W2273028709","https://openalex.org/W2395626624","https://openalex.org/W2484971506","https://openalex.org/W2509782679","https://openalex.org/W2517374056","https://openalex.org/W2538951014","https://openalex.org/W2555392883","https://openalex.org/W2565315144","https://openalex.org/W2603561009","https://openalex.org/W2605504874","https://openalex.org/W2765922336","https://openalex.org/W2766430108","https://openalex.org/W2767593460","https://openalex.org/W2949128383","https://openalex.org/W2952185578","https://openalex.org/W2953186705","https://openalex.org/W3143493145","https://openalex.org/W4230534510","https://openalex.org/W4243903519","https://openalex.org/W4251959437","https://openalex.org/W6651181965","https://openalex.org/W6745601472","https://openalex.org/W7073526437"],"related_works":["https://openalex.org/W3107779685","https://openalex.org/W3179911228","https://openalex.org/W2508378376","https://openalex.org/W2603561009","https://openalex.org/W7202175938","https://openalex.org/W2402388476","https://openalex.org/W3065251400","https://openalex.org/W3208569598","https://openalex.org/W3048848030","https://openalex.org/W1989106863"],"abstract_inverted_index":{"Microorganisms":[0],"modify":[1],"their":[2],"environment":[3,40],"by":[4],"excreting":[5],"by-products":[6],"of":[7,28,52,101,120,123,128,135,158,173,177,194],"metabolism,":[8],"which":[9,156],"can":[10,16,161],"create":[11,105],"new":[12,106,195],"ecological":[13,107,183,196],"niches":[14,108,197],"that":[15,34,63,78],"help":[17],"microbial":[18],"populations":[19,33],"diversify.":[20],"A":[21],"striking":[22],"example":[23],"comes":[24],"from":[25],"experimental":[26],"evolution":[27],"genetically":[29,53],"identical":[30],"Escherichia":[31],"coli":[32,57,125],"are":[35,87,92],"grown":[36],"in":[37,141],"a":[38,71,163,181],"homogeneous":[39],"with":[41,151],"the":[42,65,99,121,192],"single":[43],"carbon":[44,67,73,139,159,174],"source":[45,68],"glucose.":[46],"In":[47],"such":[48,75,84,171],"experiments,":[49],"stable":[50],"communities":[51],"diverse":[54],"cross-feeding":[55,85,165],"E.":[56,124],"cells":[58,62],"readily":[59],"emerge.":[60],"Some":[61],"consume":[64],"primary":[66,136],"glucose":[69],"excrete":[70],"secondary":[72,138],"source,":[74],"as":[76],"acetate,":[77],"sustains":[79],"other":[80],"community":[81],"members.":[82],"Few":[83],"polymorphisms":[86],"known":[88],"experimentally,":[89],"because":[90],"they":[91],"difficult":[93],"to":[94,104,131,154,180],"screen":[95],"for.":[96],"We":[97,144,167],"studied":[98],"potential":[100,190],"bacterial":[102],"metabolism":[103,122,186],"based":[109],"on":[110],"cross-feeding.":[111],"To":[112],"do":[113],"so,":[114],"we":[115],"used":[116],"genome":[117],"scale":[118],"models":[119],"and":[126,137],"metabolisms":[127],"similar":[129],"complexity,":[130],"identify":[132,155],"unique":[133,182],"pairs":[134,172],"sources":[140,160],"these":[142],"metabolisms.":[143],"then":[145],"combined":[146],"dynamic":[147],"flux":[148],"balance":[149],"analysis":[150],"analytical":[152],"calculations":[153],"pair":[157],"sustain":[162],"polymorphic":[164],"community.":[166],"identified":[168],"almost":[169],"10,000":[170],"sources,":[175],"each":[176],"them":[178],"corresponding":[179],"niche.":[184],"Bacterial":[185],"shows":[187],"an":[188],"immense":[189],"for":[191],"construction":[193],"through":[198],"cross":[199],"feeding.":[200]},"counts_by_year":[{"year":2026,"cited_by_count":11},{"year":2025,"cited_by_count":9},{"year":2024,"cited_by_count":19},{"year":2023,"cited_by_count":12},{"year":2022,"cited_by_count":7},{"year":2021,"cited_by_count":12},{"year":2020,"cited_by_count":12},{"year":2019,"cited_by_count":2},{"year":2018,"cited_by_count":1}],"updated_date":"2026-11-04T10:54:05.112534","created_date":"2018-08-03T00:00:00"}