{"id":"https://openalex.org/W2883257540","doi":"https://doi.org/10.1099/mgen.0.000198","title":"Trends in fluoroquinolone resistance in Campylobacter","display_name":"Trends in fluoroquinolone resistance in Campylobacter","publication_year":2018,"publication_date":"2018-07-19","ids":{"openalex":"https://openalex.org/W2883257540","doi":"https://doi.org/10.1099/mgen.0.000198","mag":"2883257540","pmid":"https://pubmed.ncbi.nlm.nih.gov/30024366","pmcid":"https://www.ncbi.nlm.nih.gov/pmc/articles/6159550"},"language":"en","primary_location":{"id":"doi:10.1099/mgen.0.000198","doi":"https://doi.org/10.1099/mgen.0.000198","is_oa":true,"landing_page_url":"https://doi.org/10.1099/mgen.0.000198","pdf_url":"http://www.fda.gov/downloads/animalveterinary/safetyhealth/antimicrobialresistance/nationalantimicrobialresistancemonitoringsystem/ucm528861.pdf","source":{"id":"https://openalex.org/S4210186362","display_name":"Microbial Genomics","issn_l":"2057-5858","issn":["2057-5858"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["cwts-core","doaj","dongbi-b","doyens","jufo-1","ki-jl-1","medline","norway-1","oarl","poland-40","russia-white-list-1"],"host_organization":"https://openalex.org/P4310320497","host_organization_name":"Microbiology Society","host_organization_lineage":["https://openalex.org/P4310320497"],"host_organization_lineage_names":["Microbiology Society"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Microbial Genomics","raw_type":"journal-article"},"volume":null,"type":"article","is_traditional":true,"indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"http://www.fda.gov/downloads/animalveterinary/safetyhealth/antimicrobialresistance/nationalantimicrobialresistancemonitoringsystem/ucm528861.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5028485666","display_name":"Emma L. Sproston","orcid":"https://orcid.org/0000-0003-4824-0241","observed_orcids":["https://orcid.org/0000-0003-4824-0241"]},"institutions":[{"id":"https://openalex.org/I51601045","display_name":"University of Bath","ror":"https://ror.org/002h8g185","country_code":"GB","type":"education","lineage":["https://openalex.org/I51601045"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Emma L. Sproston","raw_affiliation_strings":["1\u200bThe Milner Centre for Evolution, Department of Biology and Biochemistry, University of Bath, Bath BA27AY, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1\u200bThe Milner Centre for Evolution, Department of Biology and Biochemistry, University of Bath, Bath BA27AY, UK","institution_ids":["https://openalex.org/I51601045"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5004583753","display_name":"Helen M. L. Wimalarathna","orcid":"https://orcid.org/0000-0002-3520-7808","observed_orcids":["https://orcid.org/0000-0002-3520-7808"]},"institutions":[{"id":"https://openalex.org/I185852735","display_name":"University of Lancashire","ror":"https://ror.org/010jbqd54","country_code":"GB","type":"education","lineage":["https://openalex.org/I185852735"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Helen M. L. Wimalarathna","raw_affiliation_strings":["2\u200bSchool of Medicine University of Central Lancashire, Preston, Lancashire PR1 2HE, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"2\u200bSchool of Medicine University of Central Lancashire, Preston, Lancashire PR1 2HE, UK","institution_ids":["https://openalex.org/I185852735"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5001459507","display_name":"Samuel Keir Sheppard","orcid":"https://orcid.org/0000-0001-6901-3203","observed_orcids":["https://orcid.org/0000-0001-6901-3203","https://orcid.org/0000-0001-5108-0731"]},"institutions":[{"id":"https://openalex.org/I51601045","display_name":"University of Bath","ror":"https://ror.org/002h8g185","country_code":"GB","type":"education","lineage":["https://openalex.org/I51601045"]}],"countries":["GB"],"is_corresponding":true,"raw_author_name":"Samuel K. Sheppard","raw_affiliation_strings":["1\u200bThe Milner Centre for Evolution, Department of Biology and Biochemistry, University of Bath, Bath BA27AY, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1\u200bThe Milner Centre for Evolution, Department of Biology and Biochemistry, University of Bath, Bath BA27AY, UK","institution_ids":["https://openalex.org/I51601045"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5001459507"],"corresponding_institution_ids":["https://openalex.org/I51601045"],"apc_list":{"value":1500,"currency":"GBP","value_usd":1839},"apc_paid":{"value":1500,"currency":"GBP","value_usd":1839},"fwci":11.8638,"has_fulltext":true,"cited_by_count":170,"citation_normalized_percentile":{"value":0.99411738,"is_in_top_1_percent":true,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":88,"max":100},"biblio":{"volume":"4","issue":"8","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10486","display_name":"Salmonella and Campylobacter epidemiology","score":0.9990000128746033,"subfield":{"id":"https://openalex.org/subfields/1106","display_name":"Food Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10486","display_name":"Salmonella and Campylobacter epidemiology","score":0.9990000128746033,"subfield":{"id":"https://openalex.org/subfields/1106","display_name":"Food Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10147","display_name":"Antibiotic Resistance in Bacteria","score":0.000699999975040555,"subfield":{"id":"https://openalex.org/subfields/2726","display_name":"Microbiology (medical)"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10897","display_name":"Antibiotic Use and Resistance","score":9.999999747378752e-05,"subfield":{"id":"https://openalex.org/subfields/2725","display_name":"Infectious Diseases"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/campylobacter","display_name":"Campylobacter","score":0.9980000257492065},{"id":"https://openalex.org/keywords/fluoroquinolone-resistance","display_name":"fluoroquinolone resistance","score":1.0},{"id":"https://openalex.org/keywords/ciprofloxacin-resistance","display_name":"ciprofloxacin resistance","score":0.9210000038146973},{"id":"https://openalex.org/keywords/antimicrobial-resistance","display_name":"antimicrobial resistance","score":0.7360000014305115},{"id":"https://openalex.org/keywords/horizontal-gene-transfer","display_name":"horizontal gene transfer","score":0.8659999966621399},{"id":"https://openalex.org/keywords/clinical-isolates","display_name":"clinical isolates","score":0.9850000143051147},{"id":"https://openalex.org/keywords/bacterial-gastroenteritis","display_name":"bacterial gastroenteritis","score":0.9649999737739563},{"id":"https://openalex.org/keywords/resistance-prediction","display_name":"resistance prediction","score":0.4129999876022339},{"id":"https://openalex.org/keywords/dna-sequence-data","display_name":"DNA sequence data","score":0.3440000116825104}],"concepts":[{"id":"https://openalex.org/C2779910956","wikidata":"https://www.wikidata.org/wiki/Q131488","display_name":"Campylobacter","level":3,"score":0.9397798776626587},{"id":"https://openalex.org/C2778512257","wikidata":"https://www.wikidata.org/wiki/Q256602","display_name":"Ciprofloxacin","level":3,"score":0.7630826234817505},{"id":"https://openalex.org/C94665300","wikidata":"https://www.wikidata.org/wiki/Q63391344","display_name":"Antibiotic resistance","level":3,"score":0.6540361642837524},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.5324535965919495},{"id":"https://openalex.org/C501593827","wikidata":"https://www.wikidata.org/wiki/Q12187","display_name":"Antibiotics","level":2,"score":0.5012671947479248},{"id":"https://openalex.org/C188198153","wikidata":"https://www.wikidata.org/wiki/Q1613840","display_name":"Limiting","level":2,"score":0.4566362202167511},{"id":"https://openalex.org/C112964050","wikidata":"https://www.wikidata.org/wiki/Q103459","display_name":"Livestock","level":2,"score":0.4291917383670807},{"id":"https://openalex.org/C89423630","wikidata":"https://www.wikidata.org/wiki/Q7193","display_name":"Microbiology","level":1,"score":0.4061811566352844},{"id":"https://openalex.org/C523546767","wikidata":"https://www.wikidata.org/wiki/Q10876","display_name":"Bacteria","level":2,"score":0.2600357234477997},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.13385295867919922},{"id":"https://openalex.org/C18903297","wikidata":"https://www.wikidata.org/wiki/Q7150","display_name":"Ecology","level":1,"score":0.07683086395263672},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.0},{"id":"https://openalex.org/C78519656","wikidata":"https://www.wikidata.org/wiki/Q101333","display_name":"Mechanical engineering","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002167","descriptor_name":"Campylobacter","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D002167","descriptor_name":"Campylobacter","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D002167","descriptor_name":"Campylobacter","qualifier_ui":"Q000254","qualifier_name":"growth & development","is_major_topic":false},{"descriptor_ui":"D002167","descriptor_name":"Campylobacter","qualifier_ui":"Q000302","qualifier_name":"isolation & purification","is_major_topic":false},{"descriptor_ui":"D002939","descriptor_name":"Ciprofloxacin","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D022761","descriptor_name":"Gene Transfer, Horizontal","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D024881","descriptor_name":"Drug Resistance, Bacterial","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true}],"locations_count":5,"locations":[{"id":"doi:10.1099/mgen.0.000198","doi":"https://doi.org/10.1099/mgen.0.000198","is_oa":true,"landing_page_url":"https://doi.org/10.1099/mgen.0.000198","pdf_url":"http://www.fda.gov/downloads/animalveterinary/safetyhealth/antimicrobialresistance/nationalantimicrobialresistancemonitoringsystem/ucm528861.pdf","source":{"id":"https://openalex.org/S4210186362","display_name":"Microbial Genomics","issn_l":"2057-5858","issn":["2057-5858"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["cwts-core","doaj","dongbi-b","doyens","jufo-1","ki-jl-1","medline","norway-1","oarl","poland-40","russia-white-list-1"],"host_organization":"https://openalex.org/P4310320497","host_organization_name":"Microbiology Society","host_organization_lineage":["https://openalex.org/P4310320497"],"host_organization_lineage_names":["Microbiology Society"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Microbial Genomics","raw_type":"journal-article"},{"id":"pmh:oai:europepmc.org:5132738","doi":null,"is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/6159550","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":null,"raw_type":"Text"},{"id":"pmh:oai:pubmedcentral.nih.gov:6159550","doi":null,"is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/6159550","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Microb Genom","raw_type":"Text"},{"id":"pmid:30024366","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/30024366","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Microbial genomics","raw_type":"Journal Article"},{"id":"pmh:oai:clok.uclan.ac.uk:23630","doi":null,"is_oa":false,"landing_page_url":"http://orcid.org/0000-0002-3520-7808>","pdf_url":null,"source":{"id":"https://openalex.org/S4306402361","display_name":"CLOK (University of Central Lancashire)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I185852735","host_organization_name":"University of Lancashire","host_organization_lineage":["https://openalex.org/I185852735"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"acceptedVersion","is_accepted":true,"is_published":false,"raw_source_name":null,"raw_type":"Article"}],"best_oa_location":{"id":"doi:10.1099/mgen.0.000198","doi":"https://doi.org/10.1099/mgen.0.000198","is_oa":true,"landing_page_url":"https://doi.org/10.1099/mgen.0.000198","pdf_url":"http://www.fda.gov/downloads/animalveterinary/safetyhealth/antimicrobialresistance/nationalantimicrobialresistancemonitoringsystem/ucm528861.pdf","source":{"id":"https://openalex.org/S4210186362","display_name":"Microbial Genomics","issn_l":"2057-5858","issn":["2057-5858"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["cwts-core","doaj","dongbi-b","doyens","jufo-1","ki-jl-1","medline","norway-1","oarl","poland-40","russia-white-list-1"],"host_organization":"https://openalex.org/P4310320497","host_organization_name":"Microbiology Society","host_organization_lineage":["https://openalex.org/P4310320497"],"host_organization_lineage_names":["Microbiology Society"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Microbial Genomics","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/3","score":0.8371999859809875,"display_name":"Good health and well-being"}],"study_designs":[],"awards":[{"id":"https://openalex.org/G3948045431","display_name":"Modelling Campylobacter survival and spread through poultry processing: a population genomics approach.","funder_award_id":"BB/I02464X/1","funder_id":"https://openalex.org/F4320334629","funder_display_name":"Biotechnology and Biological Sciences Research Council"},{"id":"https://openalex.org/G4216794742","display_name":"The MRC Consortium for Medical Microbial Bioinformatics","funder_award_id":"MR/L015080/1","funder_id":"https://openalex.org/F4320334626","funder_display_name":"Medical Research Council"}],"funders":[{"id":"https://openalex.org/F4320311904","display_name":"Wellcome Trust","ror":"https://ror.org/029chgv08"},{"id":"https://openalex.org/F4320334626","display_name":"Medical Research Council","ror":"https://ror.org/03x94j517"},{"id":"https://openalex.org/F4320334629","display_name":"Biotechnology and Biological Sciences Research Council","ror":"https://ror.org/00cwqg982"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2883257540.pdf","grobid_xml":"https://content.openalex.org/works/W2883257540.grobid-xml"},"referenced_works_count":66,"referenced_works":["https://openalex.org/W246202178","https://openalex.org/W1491967641","https://openalex.org/W1552168151","https://openalex.org/W1755824933","https://openalex.org/W1833480994","https://openalex.org/W1938982144","https://openalex.org/W1969643656","https://openalex.org/W1974024574","https://openalex.org/W1977060309","https://openalex.org/W1977184995","https://openalex.org/W1995514873","https://openalex.org/W2010504473","https://openalex.org/W2012765745","https://openalex.org/W2026334742","https://openalex.org/W2045954937","https://openalex.org/W2048227696","https://openalex.org/W2048685517","https://openalex.org/W2053940732","https://openalex.org/W2063558597","https://openalex.org/W2067146872","https://openalex.org/W2069532141","https://openalex.org/W2082681019","https://openalex.org/W2087193563","https://openalex.org/W2107508284","https://openalex.org/W2112879979","https://openalex.org/W2117834417","https://openalex.org/W2124510179","https://openalex.org/W2124729873","https://openalex.org/W2126012088","https://openalex.org/W2135667219","https://openalex.org/W2141903950","https://openalex.org/W2144156089","https://openalex.org/W2144225596","https://openalex.org/W2145723105","https://openalex.org/W2146700947","https://openalex.org/W2148392907","https://openalex.org/W2148437824","https://openalex.org/W2149191771","https://openalex.org/W2157119382","https://openalex.org/W2160302809","https://openalex.org/W2161183899","https://openalex.org/W2164466614","https://openalex.org/W2164813102","https://openalex.org/W2167174099","https://openalex.org/W2186267492","https://openalex.org/W2226073398","https://openalex.org/W2323651612","https://openalex.org/W2339423458","https://openalex.org/W2414912713","https://openalex.org/W2510653805","https://openalex.org/W2522996568","https://openalex.org/W2535821463","https://openalex.org/W2551267404","https://openalex.org/W2575748729","https://openalex.org/W2587913404","https://openalex.org/W2601123073","https://openalex.org/W2601343332","https://openalex.org/W2604273485","https://openalex.org/W2604622762","https://openalex.org/W2613043704","https://openalex.org/W2734394950","https://openalex.org/W2762018300","https://openalex.org/W2767293785","https://openalex.org/W4205455209","https://openalex.org/W4211008759","https://openalex.org/W4211039149"],"related_works":["https://openalex.org/W2566577182","https://openalex.org/W1967247228","https://openalex.org/W2601343332","https://openalex.org/W2087193563","https://openalex.org/W3078073585","https://openalex.org/W7015758277","https://openalex.org/W2087744157","https://openalex.org/W2052232167","https://openalex.org/W3108592815","https://openalex.org/W4366290911"],"abstract_inverted_index":{"Members":[0],"of":[1,9,40,74,76,108,114,140,142],"the":[2,30,41,46,77,104,112,143],"genus":[3,78,144],"Campylobacter":[4,35,79,145],"remain":[5],"a":[6,26],"leading":[7],"cause":[8],"bacterial":[10],"gastroenteritis":[11],"worldwide.":[12],"Infection":[13],"is":[14],"usually":[15],"self-limiting":[16],"but":[17],"in":[18,66,72,121,123],"severe":[19],"cases":[20],"may":[21],"require":[22],"antibiotic":[23],"treatment.":[24],"In":[25,58],"recent":[27,64],"statement":[28],"by":[29],"World":[31],"Health":[32],"Organization":[33],"(WHO)":[34],"was":[36],"named":[37],"as":[38],"one":[39],"12":[42],"bacteria":[43],"that":[44,133],"pose":[45],"greatest":[47],"threat":[48],"to":[49,56],"human":[50],"health":[51],"because":[52],"they":[53],"are":[54],"resistant":[55],"antibiotics.":[57],"this":[59],"mini":[60],"review":[61,131],"we":[62,102],"describe":[63,119],"trends":[65,120],"fluoroquinolone":[67],"(FQ)":[68],"(particularly":[69],"ciprofloxacin)":[70],"resistance":[71,96,110,135],"strains":[73],"members":[75,141],"isolated":[80],"from":[81,86,91,98,125,146],"livestock":[82,126],"and":[83,94,106,111,118,127],"clinical":[84,128],"samples":[85,124],"several":[87],"countries.":[88],"Using":[89],"evidence":[90],"phenotyping":[92],"surveys":[93],"putative":[95],"prediction":[97],"DNA":[99],"sequence":[100],"data,":[101],"discuss":[103],"acquisition":[105],"spread":[107],"FQ":[109,134],"role":[113],"horizontal":[115],"gene":[116],"transfer":[117],"FQ-resistance":[122],"cases.":[129],"This":[130],"emphasises":[132],"remains":[136],"common":[137],"among":[138],"isolates":[139],"various":[147],"sources.":[148]},"counts_by_year":[{"year":2026,"cited_by_count":7},{"year":2025,"cited_by_count":26},{"year":2024,"cited_by_count":21},{"year":2023,"cited_by_count":25},{"year":2022,"cited_by_count":26},{"year":2021,"cited_by_count":22},{"year":2020,"cited_by_count":27},{"year":2019,"cited_by_count":14},{"year":2013,"cited_by_count":1}],"updated_date":"2026-11-07T11:25:07.637180","created_date":"2018-08-03T00:00:00"}
